期刊文献+

利用Y-RACE法进行棉花胚珠cDNA末端快速扩增 被引量:4

Rapid Amplification of Cotton Ovule cDNA Ends by Y-RACE
在线阅读 下载PDF
导出
摘要 在YADE(Y shapedadaptordependentextension)方法的基础上 ,设计了一种新的cDNA末端快速扩增方法 ,称为Y RACE法 .利用该方法只需一次cDNA合成就能进行多个基因的 3′和 5′末端的扩增 .分别利用Y RACE方法和RACE试剂盒 (TaKaRa)扩增了一个棉花胚珠cDNA片段F0 2 7的末端序列 .序列比较表明 ,用Y RACE方法扩增的末端序列较试剂盒所得序列在最末端稍短 ,但同样能进行正确拼接并获得全长编码序列 .对Y RACE法的优缺点和可能的改进作了进一步讨论 . Based on the Y shaped adaptor dependent extension (YADE) method, a new RACE method, designated as Y RACE, was developed. With this method, the 3′and 5′terminals of most of cDNA species present in the sample can be amplified from a single reaction of cDNA synthesis. The 3′and 5′cDNA ends of a differential cDNA AFLP fragment F027 from cotton ovules were amplified by Y RACE and RACE kits (TaKaRa). Sequence alignment demonstrated that the two fragments obtained by Y RACE, although several base shorter in the ultimate terminal than those amplified by RACE kits, could be joined to gain the complete coding region. The possible improvements and applications of Y RACE method were further discussed.
出处 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2002年第6期688-692,共5页 Chinese Journal of Biochemistry and Molecular Biology
基金 国家自然科学基金资助项目 (No .3 983 0 2 40 )
关键词 Y-RACE法 棉花 胚珠 CDNA末端 快速扩增 cotton ouult, YADE method, Y RACE, Y shaped adaptor, rapid amplification
  • 相关文献

参考文献4

二级参考文献19

  • 1[1]Ochman H, Gerber A S, Hartl D L. Genetic application of an inverse polymerase chain reaction. Genetics, 1988, 120:621~623.
  • 2[2]Rosenthal A, Jones D S C. Genomic walking and sequencing by oligo-cassette mediated polymerase chain reaction. Nucleic Acids Res., 1990, 18:3095~3096.
  • 3[3]Siebert P D, Chenchik A, Kellogg D E, Lukyanov K A, Lukyanov Y A. An improved PCR method for walking in uncloned genomic DNA. Nucleic Acids Res., 1995, 23:1087~1088.
  • 4[4]Devon R S, Porteous D, Brookes A J. Splinkerettes-improved vectorettes for greater efficiency in PCR walking. Nucleic Acids Res., 1995, 23:1644~1645.
  • 5[5]Terauchi R, Kahl G. Rapid isolation of promoter sequences by TAIL-PCR: the 5′-flanking regions of Pal and Pgi genes from yams (Dioscorea). Mol. Gen. Genet., 2000, 263:554~560.
  • 6[6]Prarshar Y, Weissman S M. Analysis of differential gene expression by display of 3′ end restriction fragments of cDNAs. Pro. Natl. Acad. Sci. USA, 1996, 93:659~663.
  • 7[7]Dellaporta S L, Wood J, Hicks J B. A plant DNA mini-preparation: vision II. Plant Mol. Biol. Rep., 1983, 1(4):19.
  • 8[8]Sato S, Kaneko T, Kotani H, Nakamura Y, Asamizu E, Miyajima N, Tabata. S. Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence features of the regions of 1 456 315 bp covered by nineteen physically assigned P1 and TAC clones. DNA Res., 1998, 5(1):41~54.
  • 9[9]Simpson G G, Filipowicz W. Splicing of precursors to mRNA in higher plants: mechanism, regulation and sub-nuclear organization of the spliceosomal machinery. Plant Mol. Biol., 1996, 32:1~41.
  • 10[10]Negi M S, Devic M, Delseny M, Lakshmikumaran M. Identification of AFLP fragments linked to seed coat colour in Brassica juncea and conversion to a SCAR marker for rapid selection. Theor. Appl. Genet., 2000, 101:146~152.

共引文献80

同被引文献99

  • 1罗小英,崔衍波,邓伟,李德谋,裴炎.超量表达苹果酸脱氢酶基因提高苜蓿对铝毒的耐受性[J].分子植物育种,2004,2(5):621-626. 被引量:35
  • 2计长远.资阳香橙被誉为中国柑桔抗碱砧木之王[J].中国果业信息,2007,24(2):39-39. 被引量:3
  • 3李广存,金黎平,王晓武,谢开云,谢丙炎,屈冬玉.cDNA文库与RACE方法结合克隆马铃薯DnaJ-like基因全长cDNA[J].园艺学报,2007,34(3):649-654. 被引量:7
  • 4Anoop V M,Basu U,McCammon M T,McAlister-Henn L,Taylor G J.2003.Modulation of citrate metabolism alters aluminum tolerance in yeast and transgenic canola overexpressing a mitochondrial citrate synthase. Plant Physiology, 132:2205 -2217.
  • 5Cancado G M A, Loguercio L L, Martins P R, Parentoni S N, Paiva E, Borem A, Lopes M A. 1999. Hematoxylin staining as a phenotypic index for aluminum tolerance selection in tropical maize (Zea mays L. ). TAG Theoretical and Applied Genetics, 99 : 747 - 754.
  • 6Delhaize E, Hebb D M, Ryan P R. 2001. Expression of a Pseudomonas aeruginosa citrate synthase gene in tobacco is not associated with either en-hanced citrate accumulation or efflux. Plant Physiology, 125:2059 -2067.
  • 7Faske M, Backhausen J E, Sendker M, Singer-Bayrle M, Scheibe R, yon Schaewen A. 1997. Transgenic tobacco plants expressing pea chloroplast nmdh cDNA in sense and antisense orientation ( Effects on NADP-malate dehydrogenase level, stability of transformants, and plant growth). Plant Physiol, 115 : 705 -715.
  • 8Gietl C. 1992. Malate dehydrogenase isoenzymes: Cellular locations and role in the flow of metabolites between the cytoplasm and cell organelles. Biochimica et Biophysica Acta, 1100 : 217 - 234.
  • 9Havas M. 1986. A hematoxylin staining technique to locate sites of aluminum binding in aquatic plants and animals. Water, Air & Soil Pollution, 30: 735-741.
  • 10Horsch R B, Fry J E, Hoffmann N L, Eichhohz D, Rogers S G, Fraley R T. 1985. A simple and general method for transferring genes into plants. Science, 227 : 1229 - 1231.

引证文献4

二级引证文献40

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部