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盐胁迫下棉属野生种旱地棉(Gossypium aridum)差异表达基因的cDNA-AFLP分析(英文) 被引量:6

cDNA-AFLP Analysis of Differentially-Expressed Genes in Response to Salt Stress in Gosspyium aridum
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摘要 以一个耐盐的二倍体野生种旱地棉和对盐敏感的陆地棉栽培种苏棉12号为材料,运用cDNA—AFLP技术,比较两个材料分别在盐胁迫前后的表达情况,获得了25个仅在旱地棉盐胁迫下特异表达的转录片段(TDF)。将这些片段进行电子克隆,延伸后的序列进行BLAST分析,结果显示23个转录片段推断的氨基酸序列与已知的蛋白同源,这些盐诱导表达的基因主要涉及离子转运、活性氧清除、细胞信号传导、细胞分裂、转录调节、膜保护、渗透调节等功能蛋白。从23个差异表达的转录片段中选择9个进行实时定量PCR(qRT—PCR)分析,结果表明这些基因在盐胁迫后表达显著增强,而且多数在12~24h达到高峰。这些cDNA克隆是开展棉花耐盐性分子基础研究的重要资源。 In this study, we used a salt-tolerant diploid G. aridum species and the salt-sensitive G. hirsutum cultivar Sumian 12 to investigate differential expression in the presence of salt stress. Using cDNA-AFLP, 25 transcript-derived fragments(TDFs) were isolated and confirmed to be present only in salt tolerant species G. aridum under salt-stressed conditions. BLAST analysis with sequences assembled using an in-silico approach demonstrated that 23 of the eDNA fragments had homology to known proteins. The up-regulated genes were mainly involved in ion transport, ROS scavenging, cell signaling, cell division, transcription regula- tion, membrane protection, and penetration regulation. Quantitative real-time PCR(qRT-PCR) was used to analyze the expression patterns of nine of the 23 TDFs at different stages of salt stress in the tolerant species G. aridum. Their expression showed a significant increase and reached a peak between 12 24 h of stress. These TDFs may serve as useful resources for future research on molecular mechanisms of salt stress response in cotton.
出处 《棉花学报》 CSCD 北大核心 2012年第5期435-443,共9页 Cotton Science
基金 转基因生物新品种培育重大专项(2011ZX08005-004-002) 江苏省农业科技自主创新基金(CX(11)1201)
关键词 棉属 盐胁迫 cDNA—AFLP 转录片段(TDFs) 实时定量PCR(qRT—PCR) Gossypium salt stress cDNA-AFLP transcript-derived fragments (TDFs) quantitative real-time PCR (qRT-PCR)
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