摘要
目的:基于网络药理学思路与方法,研究二妙丸中有效成分、靶点、通路之间的关系,预测其可能的"一方多效"药理机制。方法:依托中药分子机制的生物信息学分析工具服务器(BATMAN-TCM)对二妙丸进行成分-靶点的预测和筛选,借助检索相互作用的基因/蛋白质的搜索工具平台(STRING)构建靶蛋白互作网络,利用Bi NGO和MCODE插件对靶基因进行基因本体(GO)生物过程富集和聚类分析,通过注释、可视化和集成发现的数据库(DAVID)平台对关键靶点京都基因与基因组百科全书(KEGG)信号通路进行富集分析。结果:二妙丸活性成分作用于血清白蛋白(ALB),丝裂原活化蛋白激酶1(MAPK1),肿瘤坏死因子(TNF),前列腺素内环氧合酶2(PTGS2),5-羟色胺受体2A(HTR2A),腺苷脱氨酶(ADA),糖皮质激素受体(NR3C1)等37个关键靶点;参与炎症反应、神经传导、金属阳离子稳态平衡、氧化还原、脂质代谢、核苷酸代谢等GO生物过程;调控TNF,TRP通道炎症调控,FcεRI信号通路,Ⅱ型糖尿病,钙离子信号通路,5-羟色胺以及多种信号转导、肿瘤、细胞色素P450通路。结论:二妙丸除具有治疗痛风、关节炎、湿疹等炎症疾病外,还可能具有抗糖尿病周围神经病变、治疗神经系统、胃肠系统、心血管系统疾病的"一方多效"作用。
Objective: To study the relationship between effective ingredients,targets and pathway in Ermiaowan,and predict its possible "Multi-Efficacy of One Formula "Molecular Mechanism based on Network Pharmacology. Method: The main ingredients and targets of Ermiaowan were predicted and screened by relying on A Bioinformatics Analysis Tool for Molecular mech ANism of Traditional Chinese Medicine server( BATMANTCM). The Search Tool for the Retrieval of Interacting Genes/Proteins platform( STRING) was used to construct target-protein interaction network,and gene ontology( GO) bioprocess enrichment and clustering analysis of target genes were finished by using Bi NGO and MCODE plug-ins. Database for Annotation,Visualization and Integrated Discovery( DAVID) was used to analyze kyoto Encyclopedia of Genes and Genomes( KEGG) signaling pathways of the key targets. Result: The active ingredients of Ermiaowan acted on 37 key targets such as serum albumin( ALB),mitogen-activated protein kinase1( MAPK1),tumour necrosis factor( TNF), prostaglandin G/H synthase 2( PTGS2),5-hydroxytryptamine receptor 2 A( HTR2 A),adenosine deaminase( ADA),glucocorticoid receptor( NR3 C1). Got mainly involved in GO biological processes such as inflammation,nerve conduction,metal ions homeostasis, oxidation and reduction, lipid metabolism, and nucleotide metabolism; regulated signaling pathways such as TNF,TRP channel inflammatory,FcεRI,Type Ⅱ diabetes mellitus,calcium signaling pathway,serotonergic and a variety of signal transduction,tumor and cytochrome P450 enzyme. Conclusion: Besides Gout,arthritis,eczema and some inflammatory diseases,Ermiaowan may also have "Multi-Efficacy of One Formula"effect on diabetic peripheral neuropathy,nervous system,gastrointestinal system and cardiovascular system diseases.
作者
刘志强
王博龙
LIU Zhi-qiang;WANG Bo-long(School of Chemical and Biological Engineering,Yichun University,Yichun 336000,China)
出处
《中国实验方剂学杂志》
CAS
CSCD
北大核心
2018年第18期198-206,共9页
Chinese Journal of Experimental Traditional Medical Formulae
基金
江西省教育厅项目(GJJ12596)
关键词
二妙丸
网络药理学
聚类分析
靶点
通路
蛋白互作
Ermiaowan
network pharmacology
cluster analysis
targets
pathways
protein-protein interaction