期刊文献+

逆转录-环介导等温扩增快速检测EV71病毒 被引量:1

Rapid detection of EV71 with reverse transcription loop-Mediated isothermal amplification
暂未订购
导出
摘要 目的建立一种检测肠道病毒71型(EV71)快速、敏感的一步逆转录-环介导等温扩增(RT-LAMP)方法。方法针对EV71病毒VP2基因特异性序列的6个区域设计4条LAMP引物,建立RT-LAMP检测方法,并评价其特异性和灵敏度。结果通过GoldView染色和凝胶电泳均能观察到LAMP扩增产物的存在,且与柯萨奇病毒A16型(CA16)无交叉反应发生。所建立的RT-LAMP检测方法灵敏,最低检测限为1.0×102copies/mL。RT-LAMP检测的41份咽拭子标本中有27份出现EV71阳性反应,与荧光定量PCR结果一致。结论 RT-LAMP是一种快速、敏感、特异、准确的方法,适合用于基层医疗机构临床检测。 Objective To establish a reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay for rapid and sensitive detection of enterovirus 71(EV71). Methods Four primers which recognized 6 distinct regions on the VP2 gene of EV71 were designed for RT-LAMP assay, and the sensitivity and specificity were also evaluated. Results The amplified products were observed with GoldView staining and electrophoresis analysis , and there was no cross reaction with Coxasckie virus A16. The RT-LAMP assay was highly sensitive and had a detection limit of 1.0×10 2 copies/mL. Of 41 swab specimens, 27 were EV71 positive by RT-LAMP assay, which shared 100% identity with fluorescence quantitative PCR. Conclusion RT-LAMP is a rapid, sensitive, specific and accurate method for detection of EV71 in clinical specimens, and especially adapts to primary health care agencies.
出处 《分子诊断与治疗杂志》 2012年第1期26-29,共4页 Journal of Molecular Diagnostics and Therapy
基金 江苏省重点医学人才项目(ky0904)
关键词 逆转录-环介导等温扩增技术 肠道病毒71型 快速诊断 Reverse-transcription LAMP EV71 Rapid diagnosis
  • 相关文献

参考文献3

二级参考文献33

  • 1Okamoto S, Yoshikawa T, Ihira M, et al. Rapid detection of varicella-zoster virus infection by a loop-mediated isothermal amplification method. J Med Viral, 2004, 74:677-682.
  • 2Horisaka T, Fujita K, Iwata T, et al. Sensitive and specific detection of Yersinia pseudotuberculosis by loop-mediated isothermal amplification. J Clin Microbiol, 2004, 42:5349-5352.
  • 3Yoshikawa T, Ihira M, Akimoto S, et al. Detection of human herpesvirus 7DNA by loop-mediated isothermal amplification. J Clin Microbiol, 2004, 42 : 1348-1352.
  • 4Kuboki N, Inoue N, Sakurai T, et al. Loop-mediated isothermal amplification for detection of african trypanosomes. J Clin Microbiol,2003, 41 : 5517 - 5524.
  • 5Irayama H, Kageyama S, Moriyasu S , et al. Rapid sexing of bovine preimplantation embryos using loop-mediated isothermal amplification.Theriogenology, 2004, 62:887-896.
  • 6Mori Y, Nagamine K, Tomita N, et al. Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation. Biochem Biophys Res Commun, 2001,289 : 150-154.
  • 7Nagamine K, Hase T, Notomi T, et al. Accelerated reaction by loop-mediated isothermal amplification using loop primers. Mol Cell Probes , 2002, 16:223-229.
  • 8Nagamine K, Kuzuhara Y, Notomi T, et al. Isolation of single-stranded DNA from loop-mediated isothermal amplification (LAMP)products. Biochem Biophys Res Commun, 2002, 290 : 1195-1198.
  • 9Maruyama F, Kenzaka T, Yamaguchi N, et al. Detection of BacteriaCarrying the stx2 Gene by In Situ Loop-Mediated Isothermal Amplification. Appl Envir Microbiol, 2003,69: 5023-5028.
  • 10Notomi T, Okayama H, Masubuchi H, et al. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res, 2000, 28 :E63.

共引文献176

同被引文献33

  • 1李青雅,徐秋英,刘妮,张奉学.快速检测HBVDNA的环状介导等温DNA扩增法[J].生物技术通讯,2005,16(6):647-648. 被引量:16
  • 2李启明,马学军,周蕊,彭夫望,高寒春,匡治州,侯云德.环介导逆转录等温扩增技术(RT-LAMP)在丙型肝炎病毒基因检测中的应用[J].病毒学报,2006,22(5):334-338. 被引量:55
  • 3杨劲,蔡挺,徐岱,娄国强,孟忠华.乙型肝炎病毒DNA等温扩增体系的建立[J].中华检验医学杂志,2006,29(11):1021-1023. 被引量:17
  • 4Notomi T, Okayama H, Masubuchi H, et al. Loop-media ted isothermal amplification of DNA[J]. Nucleic Add Res,2000,28(12) : E63.
  • 5Nagamine K, Hase T, Notomi T. Accelerated reaction by loop-mediated isothermal amplification using loop primers [J]. Mol Cellular Probes, 2002,16(2) : 223-229.
  • 6Nie K,Zhang Y,Luo L,et al. Visual detection of Human enterovirus 71 subgenotype C4 and Coxsackievirus A16 by reverse transcription loop-mediated isothermal amplification with the hydroxynaphthol blue dye [J]. J Virol Methods, 2011,175 (2) : 283-286.
  • 7Dukes JP, King DP, Alexandersen S. Novel reverse tran- scription loop-mediated isothermal amplification for rapid detection of foot-and-mouth disease virus[J]. Arch Virol, 2006,151(6) : 1093-1106.
  • 8Cai T, Lou GQ, Yang J, et al. Development and evaluation of real-time loop-mediated isothermal amplification assay for Hepatitis B virus DNA quantification: A new tool for HBV management[J]. J Clin Virol, 2008,41 (2) : 270-276.
  • 9Yoneyama T, Kiyohara T, Shimasaki N, et al. Rapid and real-time detection of Hepatitis A virus by reverse tran- scription loop-mediated isothermal amplification assay [J]. J Virol Methods,2007,145(1) : 162-168.
  • 10Fukuda S,Takao S, Kuwayama M, et al. Rapid detection of Norovirus from fecal specimens by real-time transcrip tion loop mediated isothermal amplification assay[J]. J Clin Microbiol,2006,44(4): 1376-1381.

引证文献1

二级引证文献9

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部