The development of maize(Zea mays)kernels is a complex physiological process regulated by numerous genes in a spatially and temporally coordinated manner.However,many regulatory genes involved in this process remain u...The development of maize(Zea mays)kernels is a complex physiological process regulated by numerous genes in a spatially and temporally coordinated manner.However,many regulatory genes involved in this process remain unidentified.In this study,we identified ZmZFP2,a gene encoding a C4HC3-type RING zinc finger protein,which regulates kernel size and weight.This discovery was based on suppression subtractive hybridization from maize endosperm in our previous research.We further investigated the role of ZmZFP2 in regulating kernel development.The zmzfp2-ems mutant exhibited significantly reduced kernel size and weight,accompanied by fewer endosperm cells and altered starch and protein accumulation.CRISPR/Cas9-mediated knockouts and overexpression lines confirmed that ZmZFP2 positively regulates kernel size and weight,with overexpression leading to increased kernel size and weight.Transcriptome analysis revealed that ZmZFP2 regulates genes involved in zeatin biosynthesis,starch metabolism,and protein processing,further supporting its role in kernel development.Additionally,ZmZFP2 was shown to interact with the transcription factor ZmEREB98,implicating it in the gene regulatory network during grain filling.Together,these findings demonstrate that ZmZFP2 is a key regulator of maize kernel size and weight,functioning through its E3 ubiquitin ligase activity and interactions with various metabolic pathways.This study provides novel insights into the genetic regulation of kernel development and presents potential strategies for improving maize yield and quality.展开更多
Although the genetic basis for endosperm development in maize(Zea mays)has been well studied,the mechanism for coordinating grain filling with increasing kernel size remains elusive.Here,we report that increased kerne...Although the genetic basis for endosperm development in maize(Zea mays)has been well studied,the mechanism for coordinating grain filling with increasing kernel size remains elusive.Here,we report that increased kernel size was selected during modern breeding and identify a novel DELLA-like transcriptional regulator,ZmGRAS11,which positively regulates kernel size and kernel weight in maize.We find that Opaque2,a core transcription factor for zein protein and starch accumulation,transactivates the expression of Zm GRAS11.Our data suggest that the Opaque2-Zm GRAS11 module mediates synergistic endosperm enlargement with grain filling.展开更多
The embryo in maize has a critical role in controlling kernel nutrition components and grain yield.We measured five embryo weight and size traits,six kernel weight and size traits,and five embryo-tokernel ratio traits...The embryo in maize has a critical role in controlling kernel nutrition components and grain yield.We measured five embryo weight and size traits,six kernel weight and size traits,and five embryo-tokernel ratio traits in a nested association mapping(NAM)population of 611 recombinant inbred lines(RILs)derived from four inbred lines including the high-oil,giant-embryo line BY815 as the common parent.Using three statistical methods,we identified 5–22 quantitative trait loci(QTL)for each trait,explaining 4.7%–46.7%of the phenotypic variation.The genetic architecture of maize embryo size and its related traits appeared to be dominated by multiple small-effect loci with little epistasis,and the genetic control underlying embryo size appeared to be distinct from that underlying kernel size.A trait–QTL association network included 205 nodes and 439 edges and revealed 28 key loci associated with at least three traits.Cloned maize genes including Zm Urb2,Emp12 and Zm BAM1 d,maize orthologs of known rice genes that control seed size including BG1,XIAO and GS9,and 11 maize orthologs of Arabidopsis EMBRYO-DEFECTIVE(EMB)genes were identified as underlying these key loci.Further,the phenotypic and genetic relationships between embryo size and kernel size were evaluated,and genetic patterns for identified loci that control embryo size and its related traits were proposed.Our findings reveal distinct genetic architectures for embryo size,kernel size,and embryo-to-kernel ratio traits and establish a foundation for the improvement of embryo-size-mediated kernel nutrition and grain yield.展开更多
针对岩爆样本数据噪声高、数量少从而导致岩爆等级预测准确率较低的问题,提出了基于非线性分数阶中值鉴别空间学习(nonlinear fractional-order median discriminative space learning,NFMDSL)的岩爆预测方法。该方法用类中值代替类均值...针对岩爆样本数据噪声高、数量少从而导致岩爆等级预测准确率较低的问题,提出了基于非线性分数阶中值鉴别空间学习(nonlinear fractional-order median discriminative space learning,NFMDSL)的岩爆预测方法。该方法用类中值代替类均值,构建了中值鉴别空间学习方法,更好地保留了样本的有效信息,降低了噪声对预测效果的影响。为了有效捕捉岩爆数据间的非线性鉴别结构,进一步借助核技术将样本数据投影到核空间中。此外,引入分数阶对散度矩阵的特征值和奇异值进行重新估计,可以从少量样本中提取出具有良好区分能力的岩爆特征。结果表明,NFMDSL方法在岩爆等级预测中的平均准确率达到了95.75%,相比其他方法具有更高的准确率和更强的鲁棒性。该方法能够有效应用于矿山和隧道工程领域的岩爆预测。展开更多
基金supported by the National Natural Science Foundation of China(31971962,31771812,and 32272129 to Yuling Li)Zhongyuan Scholars in Henan Province(22400510003 to Yuling Li)+3 种基金the Major Public Welfare Projects of Henan Province(201300111100 to Yuling Li)Tackle Program of Agricultural Seed in Henan Province(2022010201 to Yuling Li)Technical System of Maize Industry in Henan Province(HARS62922-02-S to Yuling Li)Key Scientific Research Projects for Higher Education of Henan Province(19zx001 to Yuling Li).
文摘The development of maize(Zea mays)kernels is a complex physiological process regulated by numerous genes in a spatially and temporally coordinated manner.However,many regulatory genes involved in this process remain unidentified.In this study,we identified ZmZFP2,a gene encoding a C4HC3-type RING zinc finger protein,which regulates kernel size and weight.This discovery was based on suppression subtractive hybridization from maize endosperm in our previous research.We further investigated the role of ZmZFP2 in regulating kernel development.The zmzfp2-ems mutant exhibited significantly reduced kernel size and weight,accompanied by fewer endosperm cells and altered starch and protein accumulation.CRISPR/Cas9-mediated knockouts and overexpression lines confirmed that ZmZFP2 positively regulates kernel size and weight,with overexpression leading to increased kernel size and weight.Transcriptome analysis revealed that ZmZFP2 regulates genes involved in zeatin biosynthesis,starch metabolism,and protein processing,further supporting its role in kernel development.Additionally,ZmZFP2 was shown to interact with the transcription factor ZmEREB98,implicating it in the gene regulatory network during grain filling.Together,these findings demonstrate that ZmZFP2 is a key regulator of maize kernel size and weight,functioning through its E3 ubiquitin ligase activity and interactions with various metabolic pathways.This study provides novel insights into the genetic regulation of kernel development and presents potential strategies for improving maize yield and quality.
基金supported by the National Natural Science Foundation of China to X.J.Z.(grant number 31771707)National Special Program for GMO Development of China to R.M.C.(2016ZX08003-002)the National Key Basic Research Program of China(2014CB138205)。
文摘Although the genetic basis for endosperm development in maize(Zea mays)has been well studied,the mechanism for coordinating grain filling with increasing kernel size remains elusive.Here,we report that increased kernel size was selected during modern breeding and identify a novel DELLA-like transcriptional regulator,ZmGRAS11,which positively regulates kernel size and kernel weight in maize.We find that Opaque2,a core transcription factor for zein protein and starch accumulation,transactivates the expression of Zm GRAS11.Our data suggest that the Opaque2-Zm GRAS11 module mediates synergistic endosperm enlargement with grain filling.
基金supported by the National Natural Science Foundation of China(31421005)。
文摘The embryo in maize has a critical role in controlling kernel nutrition components and grain yield.We measured five embryo weight and size traits,six kernel weight and size traits,and five embryo-tokernel ratio traits in a nested association mapping(NAM)population of 611 recombinant inbred lines(RILs)derived from four inbred lines including the high-oil,giant-embryo line BY815 as the common parent.Using three statistical methods,we identified 5–22 quantitative trait loci(QTL)for each trait,explaining 4.7%–46.7%of the phenotypic variation.The genetic architecture of maize embryo size and its related traits appeared to be dominated by multiple small-effect loci with little epistasis,and the genetic control underlying embryo size appeared to be distinct from that underlying kernel size.A trait–QTL association network included 205 nodes and 439 edges and revealed 28 key loci associated with at least three traits.Cloned maize genes including Zm Urb2,Emp12 and Zm BAM1 d,maize orthologs of known rice genes that control seed size including BG1,XIAO and GS9,and 11 maize orthologs of Arabidopsis EMBRYO-DEFECTIVE(EMB)genes were identified as underlying these key loci.Further,the phenotypic and genetic relationships between embryo size and kernel size were evaluated,and genetic patterns for identified loci that control embryo size and its related traits were proposed.Our findings reveal distinct genetic architectures for embryo size,kernel size,and embryo-to-kernel ratio traits and establish a foundation for the improvement of embryo-size-mediated kernel nutrition and grain yield.
文摘针对岩爆样本数据噪声高、数量少从而导致岩爆等级预测准确率较低的问题,提出了基于非线性分数阶中值鉴别空间学习(nonlinear fractional-order median discriminative space learning,NFMDSL)的岩爆预测方法。该方法用类中值代替类均值,构建了中值鉴别空间学习方法,更好地保留了样本的有效信息,降低了噪声对预测效果的影响。为了有效捕捉岩爆数据间的非线性鉴别结构,进一步借助核技术将样本数据投影到核空间中。此外,引入分数阶对散度矩阵的特征值和奇异值进行重新估计,可以从少量样本中提取出具有良好区分能力的岩爆特征。结果表明,NFMDSL方法在岩爆等级预测中的平均准确率达到了95.75%,相比其他方法具有更高的准确率和更强的鲁棒性。该方法能够有效应用于矿山和隧道工程领域的岩爆预测。
