期刊文献+
共找到126篇文章
< 1 2 7 >
每页显示 20 50 100
Nuclear magnetic resonance-based metabolomics and metabolic pathway networks from patient-matched esophageal carcinoma,adjacent noncancerous tissues and urine 被引量:6
1
作者 Jia-Hao Liang Yan Lin +6 位作者 Ting Ouyang Wan Tang Yao Huang Wei Ye Jia-Yun Zhao Zhe-Ning Wang Chang-Chun Ma 《World Journal of Gastroenterology》 SCIE CAS 2019年第25期3218-3230,共13页
BACKGROUND Several studies have demonstrated a correlation between esophageal cancer(EC)and perturbed urinary metabolomic profiles,but none has described the correlation between urine metabolite profiles and those of ... BACKGROUND Several studies have demonstrated a correlation between esophageal cancer(EC)and perturbed urinary metabolomic profiles,but none has described the correlation between urine metabolite profiles and those of the tumor and adjacent esophageal mucosa in the same patient.AIM To investigate how urinary metabolic phenotypes were linked to the changes in the biochemical landscape of esophageal tumors.METHODS Nuclear magnetic resonance-based metabolomics were applied to esophageal tumor tissues and adjacent normal mucosal tissues alongside patient-matched urine samples.RESULTS Analysis revealed that specific metabolite changes overlapped across both metrics,including glucose,glutamate,citrate,glycine,creatinine and taurine,indicating that the networks for metabolic pathway perturbations in EC,potentially involved in but not limited to disruption of fatty acid metabolism,glucose and glycolytic metabolism,tricarboxylic acid cycle and glutaminolysis.Additionally,changes in most urinary biomarkers correlated with changes in biomarker candidates in EC tissues,implying enhanced energy production for rapid cell proliferation.CONCLUSION Overall,these associations provide evidence for distinct metabolic signatures and pathway disturbances between the tumor tissues and urine of EC patients,and changes in urinary metabolic signature could reflect reprogramming of the aforementioned metabolic pathways in EC tissues.Further investigation is needed to validate these initial findings using larger samples and to establish the underlying mechanism of EC progression. 展开更多
关键词 Esophageal cancer Metabolites Metabolic pathways nuclear magnetic resonance-based metabolomics Tumor tissue URINE
暂未订购
Nuclear Magnetic Resonance-Based Metabolomics Reveals Systemic Metabolic Disarray in the Transition from Acute Kidney Injury To Chronic Kidney Disease
2
作者 Lingxiao Wang Xiuru Wang +3 位作者 Tingxiao Zou Feng Su Ying Yao Jinping Gu 《Phenomics》 2025年第4期457-460,共4页
Acute kidney injury(AKI)is a significant risk factor for chronic kidney disease(CKD),yet the mechanisms driving this progression remain unclear(Kellum et al.2021).Given the kidney's role in homeostasis,AKI profoun... Acute kidney injury(AKI)is a significant risk factor for chronic kidney disease(CKD),yet the mechanisms driving this progression remain unclear(Kellum et al.2021).Given the kidney's role in homeostasis,AKI profoundly impacts systemic health,often leading to CKD,characterized by persistent damage or reduced glomerular filtration rate(GFR)(Stevens et al.2024).The high incidence of AKI and its strong association with subsequent CKD necessitates a deeper understanding of the transition process. 展开更多
关键词 reduced glomerular filtration rate gfr stevens chronic kidney disease chronic kidney disease ckd metabolomics nuclear magnetic resonance transition process acute kidney injury aki acute kidney injury
暂未订购
Proton nuclear magnetic resonance-based metabonomic models for non-invasive diagnosis of liver fibrosis in chronic hepatitis C:Optimizing the classification of intermediate fibrosis 被引量:3
3
作者 Andrea Dória Batista Carlos Jonnatan Pimentel Barros +7 位作者 Tássia Brena Barroso Carneiro Costa Michele Maria Goncalves de Godoy Ronaldo Dionísio Silva Joelma Carvalho Santos Mariana Montenegro de Melo Lira Norma ThoméJucá Edmundo Pessoa de Almeida Lopes Ricardo Oliveira Silva 《World Journal of Hepatology》 CAS 2018年第1期105-115,共11页
AIM To develop metabonomic models(MMs), using 1 H nuclear magnetic resonance(NMR) spectra of serum, to predict significant liver fibrosis(SF: Metavir ≥ F2), advanced liver fibrosis(AF: METAVIR ≥ F3) and cirrhosis(C:... AIM To develop metabonomic models(MMs), using 1 H nuclear magnetic resonance(NMR) spectra of serum, to predict significant liver fibrosis(SF: Metavir ≥ F2), advanced liver fibrosis(AF: METAVIR ≥ F3) and cirrhosis(C: METAVIR = F4 or clinical cirrhosis) in chronic hepatitis C(CHC) patients. Additionally, to compare the accuracy of the MMs with the aspartate aminotransferase to platelet ratio index(APRI) and fibrosis index based on four factors(FIB-4). METHODS Sixty-nine patients who had undergone biopsy in the previous 12 mo or had clinical cirrhosis were included. The presence of any other liver disease was a criterion for exclusion. The MMs, constructed using partial least squares discriminant analysis and linear discriminant analysis formalisms, were tested by cross-validation, considering SF, AF and C. RESULTS Results showed that forty-two patients(61%) presented SF, 28(40%) AF and 18(26%) C. The MMs showed sensitivity and specificity of 97.6% and 92.6% to predict SF; 96.4% and 95.1% to predict AF; and 100% and 98.0% to predict C. Besides that, the MMs correctly classified all 27(39.7%) and 25(38.8%) patients with intermediate values of APRI and FIB-4, respectively. CONCLUSION The metabonomic strategy performed excellently in predicting significant and advanced liver fibrosis in CHC patients, including those in the gray zone of APRI and FIB-4, which may contribute to reducing the need for these patients to undergo liver biopsy. 展开更多
关键词 metabolomics nuclear magnetic resonance spectroscopy Chronic HEPATITIS C Liver FIBROSIS Surrogate MARKERS
暂未订购
Nuclear magnetic resonance based metabolomics and liverdiseases:Recent advances and future clinical applications 被引量:7
4
作者 Roland Amathieu Mohamed Nawfal Triba +4 位作者 Corentine Goossens Nadia Bouchemal Pierre Nahon Philippe Savarin Laurence Le Moyec 《World Journal of Gastroenterology》 SCIE CAS 2016年第1期417-426,共10页
Metabolomics is defined as the quantitative measurement of the dynamic multiparametric metabolic response of living systems to pathophysiological stimuli or genetic modification.It is an"omics"technique that... Metabolomics is defined as the quantitative measurement of the dynamic multiparametric metabolic response of living systems to pathophysiological stimuli or genetic modification.It is an"omics"technique that is situated downstream of genomics,transcriptomics and proteomics.Metabolomics is recognized as a promising technique in the field of systems biology for the evaluation of global metabolic changes.During the last decade,metabolomics approaches have become widely used in the study of liver diseases for the detection of early biomarkers and altered metabolic pathways.It is a powerful technique to improve our pathophysiological knowledge of various liver diseases.It can be a useful tool to help clinicians in the diagnostic process especially to distinguish malignant and non-malignant liver disease as well as to determine the etiology or severity of the liver disease.It can also assess therapeutic response or predict drug induced liver injury.Nevertheless,the usefulness of metabolomics is often not understood by clinicians,especially the concept of metabolomics profiling or fingerprinting.In the present work,after a concise description of the different techniques and processes used in metabolomics,we will review the main research on this subject by focusing specifically on in vitro proton nuclear magnetic resonance spectroscopy based metabolomics approaches in human studies.We will first consider the clinical point of view enlighten physicians on this new approach and emphasis its future use in clinical"routine". 展开更多
关键词 metabolomics In VITRO nuclear magneticresonance SPECTROSCOPY LIVER DISEASES CIRRHOSIS
暂未订购
Assessment of periportal fibrosis in Schistosomiasis mansoni patients by proton nuclear magnetic resonance-based metabonomics models
5
作者 Milena Lima Rodrigues Tatiane Priscila Santos Rodrigues da Luz +4 位作者 Caroline Louise Diniz Pereira Andrea Dória Batista Ana Lúcia Coutinho Domingues Ricardo Oliveira Silva Edmundo Pessoa Lopes 《World Journal of Hepatology》 2022年第4期719-728,共10页
BACKGROUND The evaluation of periportal fibrosis(PPF)is essential for a prognostic assessment of patients with Schistosomiasis mansoni.The WHO Niamey Protocol defines patterns of fibrosis from abdominal ultrasonograph... BACKGROUND The evaluation of periportal fibrosis(PPF)is essential for a prognostic assessment of patients with Schistosomiasis mansoni.The WHO Niamey Protocol defines patterns of fibrosis from abdominal ultrasonography,^(1)H-nuclear magnetic resonance(NMR)-based metabonomics has been employed to assess liver fibrosis in some diseases.AIM To build 1H-NMR-based metabonomics models(MM)to discriminate mild from significant periportal PPF and identify differences in the metabolite profiles.METHODS A prospective cross-sectional study was performed on schistosomiasis patients at a University Hospital in Northeastern Brazil.We evaluated 41 serum samples from 10 patients with mild PPF(C Niamey pattern)and 31 patients with significant PPF(D/E/F Niamey patterns).MM were built using partial least squares-discriminant analysis(PLS-DA)and orthogonal projections to latent structures discriminant analysis(OPLS-DA)formalisms.RESULTS PLS-DA and OPLS-DA resulted in discrimination between mild and significant PPF groups with R2 and Q2 values of 0.80 and 0.38 and 0.72 and 0.42 for each model,respectively.The OPLS-DA model presented accuracy,sensitivity,and specificity values of 92.7%,90.3%,and 100%to discriminate significant PPF.The metabolites identified as responsible by discrimination were:Nacetylglucosamines,alanine,glycolaldehyde,carbohydrates,and valine.CONCLUSION MMs discriminated mild from significant PPF patterns in patients with Schistosomiasis mansoni through identification of differences in serum metabolites profiles. 展开更多
关键词 metabolomics Portal hypertension Schistosoma mansoni Biomarkers Neglected disease nuclear magnetic resonance
暂未订购
Nuclear magnetic resonance spectroscopy as a new approach for improvement of early diagnosis and risk stratification of prostate cancer 被引量:3
6
作者 Bo YANG Guo-qiang LIAO +5 位作者 Xiao-fei WEN Wei-hua CHEN Sheng CHENG Jens-Uwe STOLZENBURG Roman GANZER Jochen NEUHAUS 《Journal of Zhejiang University-Science B(Biomedicine & Biotechnology)》 SCIE CAS CSCD 2017年第11期921-933,共13页
Prostate cancer (PCa) is the second most common male cancer worldwide and the fifth leading cause of death from cancer in men. Early detection and risk stratification is the most effective way to improve the surviva... Prostate cancer (PCa) is the second most common male cancer worldwide and the fifth leading cause of death from cancer in men. Early detection and risk stratification is the most effective way to improve the survival of PCa patients. Current PCa biomarkers lack sufficient sensitivity and specificity to cancer. Metabolite biomarkers are evolving as a new diagnostic tool. This review is aimed to evaluate the potential of metabolite biomarkers for early detection, risk assessment, and monitoring of PCa. Of the 154 identified publications, 27 and 38 were original papers on urine and serum metabolomics, respectively. Nuclear magnetic resonance (NMR) is a promising method for measuring concentrations of metabolites in complex samples with good reproducibility, high sensitivity, and simple sample processing. Especially urine-based NMR metabolomics has the potential to be a cost-efficient method for the early detection of PCa, risk stratification, and monitoring treatment eff^cacy. 展开更多
关键词 Prostate cancer metabolomics nuclear magnetic resonance (NMR) BIOMARKER
原文传递
Specific Patterns of Spinal Metabolite Ratio Underlying a-Me-5-HTevoked Pruritus Compared with Compound 48/80 Based on Proton Nuclear Magnetic Resonance Spectroscopy
7
作者 Ying-le CHEN Zhi-gang HE +3 位作者 Qian WANG Hong-bing XIANG Li FAN Jun XIONG 《Current Medical Science》 SCIE CAS 2020年第4期761-766,共6页
Summary:Mechanisms of pruritus are implicated in the dysregulation of the metabolites in the spinal cord.We investigated pruritus behavioral testing in three groups of young adult male C57B1/6 mice,including one group... Summary:Mechanisms of pruritus are implicated in the dysregulation of the metabolites in the spinal cord.We investigated pruritus behavioral testing in three groups of young adult male C57B1/6 mice,including one group treated with normal saline,while the other groups intradermally injected with a-Me-5-HT(histamine-independent pruritogen),compound 48/80(histaminedependent pruritogen)at the nape skin of the neck,respectively.Proton nuclear magnetic resonance spectroscopy(MRS)was used to compare spinal metabolites from the vertebral cervical among three groups,and to study the association of spinal metabolite ratio and pruritus intensity.The MRS-measured N-acetylaspartate-to-myoinositol ratio(NAA/Ins)was significantly correlated with the number of scratches between normal saline group and 48/80 group or a-Me-5-HT group(both P<0.0001),indicating that NAA/Ins may be a robust surrogate marker of histamine-independent/dependent pruritogen.There was significant difference in Glu/Ins between normal saline group and 48/80 group(P=0.017),indicating that Glu/Ins may be a surrogate marker of histamine-dependent pruritogen,while GABA/Ins was highly significantly different between normal saline group and a-Me-5-HT group(P=0.008),suggesting that GABA/Ins may be a surrogate marker of histamineindependent pruritogen.MRS may reflect the extent of pruritus intensity elicited by a-Me-5-HT and compound 48/80 with sensitivity similar to the number of scratches,and above potential markers need to be further validated in pre-clinical and clinical treatment trials. 展开更多
关键词 ITCH pruritus intensity spinal cord metabolomics proton nuclear magnetic resonance
暂未订购
Metabolomics profile in gastrointestinal cancers:Update and future perspectives 被引量:8
8
作者 Giulia Nannini Gaia Meoni +1 位作者 Amedeo Amedei Leonardo Tenori 《World Journal of Gastroenterology》 SCIE CAS 2020年第20期2514-2532,共19页
Despite recent progress in diagnosis and therapy,gastrointestinal(GI)cancers remain one of the most important causes of death with a poor prognosis due to late diagnosis.Serum tumor markers and detection of occult blo... Despite recent progress in diagnosis and therapy,gastrointestinal(GI)cancers remain one of the most important causes of death with a poor prognosis due to late diagnosis.Serum tumor markers and detection of occult blood in the stool are the current tests used in the clinic of GI cancers;however,these tests are not useful as diagnostic screening since they have low specificity and low sensitivity.Considering that one of the hallmarks of cancer is dysregulated metabolism and metabolomics is an optimal approach to illustrate the metabolic mechanisms that belong to living systems,is now clear that this-omics could open a new way to study cancer.In the last years,nuclear magnetic resonance(NMR)metabolomics has demonstrated to be an optimal approach for diseases’diagnosis nevertheless a few studies focus on the NMR capability to find new biomarkers for early diagnosis of GI cancers.For these reasons in this review,we will give an update on the status of NMR metabolomic studies for the diagnosis and development of GI cancers using biological fluids. 展开更多
关键词 metabolomics nuclear magnetic resonance spectroscopy Pancreatic cancer Gastric cancer Colorectal cancer Biological fluids
暂未订购
The influence of salinity on toxicological effects of arsenic in digestive gland of clam Ruditapes philippinarum using metabolomics 被引量:4
9
作者 吉成龙 吴惠丰 +3 位作者 刘小莉 赵建民 于君宝 尹秀丽 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2013年第2期345-352,共8页
Ruditapes philippinarum,a clam that thrives in intertidal zones of various salinities,is a useful biomonitor to marine contaminants.We investigated the influence of dilution to 75% and 50% of normal seawater salinity(... Ruditapes philippinarum,a clam that thrives in intertidal zones of various salinities,is a useful biomonitor to marine contaminants.We investigated the influence of dilution to 75% and 50% of normal seawater salinity(31.1) on the responses of the digestive gland of R.philippinarum to arsenic exposure(20 μg/L),using nuclear magnetic resonance(NMR)-based metabolomics.After acute arsenic exposure for 48 h,salinity-dependent differential metabolic responses were detected.In normal seawater,arsenic exposure increased the concentrations of branched-chain amino acids,and of threonine,proline,phosphocholine and adenosine,and it decreased the levels of alanine,hypotaurine,glucose,glycogen and ATP in the digestive glands.Differential changes in metabolic biomarkers observed at lower salinity(~23.3) included elevation of succinate,taurine and ATP,and depletion of branched-chain amino acids,threonine and glutamine.Unique effects of arsenic at the lowest salinity(~15.6) included down-regulation of glutamate,succinate and ADP,and up-regulation of phosphocholine.We conclude that salinity influences the metabolic responses of this clam to arsenic. 展开更多
关键词 Ruditapes philippinarum SALINITY ARSENIC toxicological effects nuclear magnetic resonance(NMR) metabolomics
原文传递
Effect of dietary arginine to lysine ratios on productive performance,meat quality,plasma and muscle metabolomics profile in fast-growing broiler chickens
10
作者 Marco Zampiga Luca Laghi +4 位作者 Massimiliano Petracci Chenglin Zhu Adele Meluzzi Sami Dridi Federico Sirri 《Journal of Animal Science and Biotechnology》 SCIE CAS CSCD 2019年第1期183-196,共14页
Background: Due to the important functions of arginine in poultry,it should be questioned whether the currently adopted dietary Arg:Lys ratios are sufficient to meet the modern broiler requirement in arginine.The pres... Background: Due to the important functions of arginine in poultry,it should be questioned whether the currently adopted dietary Arg:Lys ratios are sufficient to meet the modern broiler requirement in arginine.The present study aimed,therefore,to evaluate the effects of the dietary supplementation of L-arginine in a commercial broiler diet on productive performance,breast meat quality attributes,incidence and severity of breast muscle myopathies and foot pad dermatitis(FPD),and plasma and muscle metabolomics profile in fast-growing broilers.Results: A total of 1,170 1-day-old Ross 308 male chicks was divided into two experimental groups of 9 replicates each fed either a commercial basal diet(CON,digestible Arg:Lys ratio of 1.05,1.05,1.06 and 1.07 in each feeding phase,respectively) or the same basal diet supplemented on-top with crystalline L-arginine(ARG,digestible Arg:Lys ratio of 1.15,1.15,1.16 and 1.17,respectively).Productive parameters were determined at the end of each feeding phase(12,22,33,43 d).At slaughter(43 d),incidence and severity of FPD and breast myopathies were assessed,while plasma and breast muscle samples were collected and analyzed by proton nuclear magnetic resonancespectroscopy.The dietary supplementation of arginine significantly reduced cumulative feed conversion ratio compared to the control diet at 12 d(1.352 vs.1.401,P < 0.05),22 d(1.398 vs.1.420; P < 0.01) and 33 d(1.494 vs.1.524; P < 0.05),and also tended to improve it in the overall period of trial(1.646 vs.1.675; P = 0.09).Body weight was significantly increased in ARG compared to CON group at 33 d(1,884 vs.1,829 g; P < 0.05).No significant effect was observed on meat quality attributes,breast myopathies and FPD occurrence.ARG birds showed significantly higher plasma concentration of arginine and leucine,and lower of acetoacetate,glutamate,adenosine and proline.Arginine and acetate concentrations were higher,whereas acetone and inosine levels were lower in the breast of ARG birds(P < 0.05).Conclusions: Taken together,these data showed that increased digestible Arg:Lys ratio had positive effects on feed efficiency in broiler chickens probably via modulation of metabolites that play key roles in energy and protein metabolism. 展开更多
关键词 ARGININE BROILER CHICKEN 1H–NMR spectroscopy MEAT quality metabolomics nuclear magnetic resonance Nutrition Productive performance
在线阅读 下载PDF
A Preliminary Urinary Metabolomics Study of Sprague-Dawley Rats after Short‑term Ketamine Administration by Proton Nuclear Magnetic Resonance Spectroscopy 被引量:1
11
作者 Xiang Lu Qunxing Tang +5 位作者 Yi Ye Run Guo Fan Chen Xinhua Dai Youyi Yan Linchuan Liao 《Journal of Forensic Science and Medicine》 2016年第2期91-97,共7页
Drug abuse has become a global problem.The mass spectrometry‑based metabolic consequences of ketamine administration in anesthesia and therapy have been well studied,but to the best of our knowledge,metabolomic studie... Drug abuse has become a global problem.The mass spectrometry‑based metabolic consequences of ketamine administration in anesthesia and therapy have been well studied,but to the best of our knowledge,metabolomic studies of ketamine abuse based on nuclear magnetic resonance(NMR)spectroscopy are still lacking.In this study,twenty Sprague–Dawley rats were randomly assigned into two groups:a control group(n=10)and a ketamine group(n=10).The animals in the ketamine group received intraperitoneal injections of ketamine twice daily at 12‑h intervals at progressively increasing doses over a period of 9 days,while the control group received an equal volume of saline.The urine samples were collected for 24 h at days 0,1,3,5,7,and 9 for the metabolomics study.The metabolic changes in urine after short‑term ketamine administration were analyzed by proton NMR coupled with multivariate statistical analysis.The results indicated that short‑term ketamine exposure led to significant alterations of the metabolites in the urine of the rats.Specifically,1,3,7‑trimethyluric acid,1,3‑dimethyluric acid,acetoacetic acid,acetylglycine,creatine,sarcosine,dimethylglycine,glycine,and theobromine were significantly increased in the urine.Significant changes were also found in metabolites related to antioxidant and energy metabolism,including acetoacetic acid,succinate,1,3,7‑trimethyluric acid,1,3‑dimethyluric acid,creatine,and taurine.Our findings indicated that short‑term ketamine administration leads to disorder of energy metabolism and oxidative stress.In addition,the modified metabolites identified could serve as the new biological markers and potential biological indices reflecting the underlying mechanism of ketamine abuse. 展开更多
关键词 BIOMARKER KETAMINE metabolomics proton nuclear magnetic resonance
原文传递
Metabolomic studies of human gastric cancer:Review 被引量:22
12
作者 Naresh Doni Jayavelu Nadav S Bar 《World Journal of Gastroenterology》 SCIE CAS 2014年第25期8092-8101,共10页
Metabolomics is a field of study in systems biology that involves the identification and quantification of metabolites present in a biological system. Analyzing metabolic differences between unperturbed and perturbed ... Metabolomics is a field of study in systems biology that involves the identification and quantification of metabolites present in a biological system. Analyzing metabolic differences between unperturbed and perturbed networks, such as cancerous and noncancerous samples, can provide insight into underlying disease pathology, disease prognosis and diagnosis. Despite the large number of review articles concerning metabolomics and its application in cancer research, biomarker and drug discovery, these reviews do not focus on a specific type of cancer. Metabolomics may provide biomarkers useful for identification of early stage gastric cancer, potentially addressing an important clinical need. Here, we present a short review on metabolomics as a tool for biomarker discovery in human gastric cancer, with a primary focus on its use as a predictor of anticancer drug chemosensitivity, diagnosis, prognosis, and metastasis. 展开更多
关键词 metabolomics Gastric cancer CHEMOSENSITIVITY METASTASIS Biomarkers nuclear magnetic resonance spectroscopy Liquid/gas chromatography and mass spectrometry
暂未订购
Serum and urine metabolomic fingerprinting in diagnostics of inflammatory bowel diseases 被引量:19
13
作者 Tomasz Dawiskiba Stanislaw Deja +14 位作者 Agata Mulak Adam Zabek Ewa Jawień Dorota Pawelka Miroslaw Banasik Agnieszka Mastalerz-Migas Waldemar Balcerzak Krzysztof Kaliszewski Jan Skóra Piotr Bar Krzysztof Korta Kornel Pormańczuk Przemyslaw Szyber Adam Litarski Piotr Mlynarz 《World Journal of Gastroenterology》 SCIE CAS 2014年第1期163-174,共12页
AIM: To evaluate the utility of serum and urine metabolomic analysis in diagnosing and monitoring of inflammatory bowel diseases (IBD).
关键词 metabolomics Inflammatory bowel disease Ulcerative colitis Crohn's disease Proton nuclear magnetic resonance spectroscopy URINE SERUM Partial least-squares-discriminant analysis
暂未订购
Prediction of Response of Collagen-induced Arthritis Rats to Methotrexate: An ~1H-NMR-based Urine Metabolomic Analysis 被引量:2
14
作者 陈哲 涂胜豪 +3 位作者 胡永红 王玉 夏玉坤 蒋毅 《Journal of Huazhong University of Science and Technology(Medical Sciences)》 SCIE CAS 2012年第3期438-443,共6页
Over one half the patients with rheumatoid arthritis (RA) are being treated with methotrexate (MTX). Although well proven, the efficacy of MTX varies in individual patients. This study examined the metabolic bioma... Over one half the patients with rheumatoid arthritis (RA) are being treated with methotrexate (MTX). Although well proven, the efficacy of MTX varies in individual patients. This study examined the metabolic biomarkers that can be used to predict the therapeutic effect of MTX by using metabolomic analysis. Rats were immunized with collagen to rapidly cause collagen-induced arthritis (CIA) and then treated with 0.1 mg/kg MTX for 4 weeks. The clinical signs and the histopathological features of CIA were observed to evaluate the therapeutic effects. Urine samples of CIA rats were collected, and analyzed by using 600 M 1H-nuclear magnetic resonance (1H-NMR) for spectral binning after the therapy. The urine spectra were divided into spectral bins, and 20 endogenous metabolites were assigned by Chenomx Suite. Multivariate analyses were performed to identify the spectral pattern of endogenous metabolites related to MTX therapy. The results showed that the clustering of the spectra of the urine samples from the responsive rats (n=20) was different from that from the non-responsive rats (n=11). Multivariate analysis showed difference in metabolic profiles between the responsive and non-responsive rats by using partial least squares-discrimination analysis (PLS-DA) (R2=0.812, Q2=0.604). In targeted profiling, 13 endogenous metabolites (uric acid, taurine, histidine, methionine, glycine, etc.) were selected as putative biomarkers for predicting therapeutic response to MTX. It was suggested that 1H-NMR-based metabolomic analysis can be used to predict the therapeutic effect of MTX, and several metabolites were found to be related to the therapeutic effects of MTX. 展开更多
关键词 1H- nuclear magnetic resonance metabolomics METHOTREXATE collagen-induced arthritis
暂未订购
Metabolome Comparison of Transgenic and Non-transgenic Rice by Statistical Analysis of FTIR and NMR Spectra 被引量:1
15
作者 Keykhosrow KEYMANESH Mohammad hassan DARVISHI Soroush SARDARI 《Rice science》 SCIE 2009年第2期119-123,共5页
Modern biotechnology, based on recombinant DNA techniques, has made it possible to introduce new traits with great potential for crop improvement. However, concerns about unintended effects of gene transformation that... Modern biotechnology, based on recombinant DNA techniques, has made it possible to introduce new traits with great potential for crop improvement. However, concerns about unintended effects of gene transformation that possibly threaten environment or consumer health have persuaded scientists to set up pre-release tests on genetically modified organisms. Assessment of 'substantial equivalence' concept that established by comparison of genetically modified organism with a comparator with a history of safe use could be the first step of a comprehensive risk assessment. Metabolite level is the dchest in performance of changes which stem from genetic or environmental factors. Since assessment of all metabolites in detail is very costly and practically impossible, statistical evaluation of processed data of grain spectroscopic values could be a time and cost effective substitution for complex chemical analysis. To investigate the ability of multivariate statistical techniques in comparison of metabolomes as well as testing a method for such comparisons with available tools, a transgenic rice in combination with its traditionally bred parent were used as test material, and the discriminant analysis were applied as supervised method and principal component analysis as unsupervised classification method on the processed data which were extracted from Fourier transform infrared spectroscopy and nuclear magnetic resonance spectral data of powdered rice and rice extraction and badey grain samples, of which the latter was considered as control. The results confirmed the capability of statistics, even with initial data processing applications in metabolome studies. Meanwhile, this study confirms that the supervised method results in more distinctive results. 展开更多
关键词 RICE principal component analysis discriminant analysis nuclear magnetic resonance Fourier transform infrared spectroscopy TRANSGENE safety assessment metabolome analysis
在线阅读 下载PDF
Fecal metabolomic profiles: A comparative study of patients with colorectal cancer vs adenomatous polyps 被引量:1
16
作者 Giulia Nannini Gaia Meoni +7 位作者 Leonardo Tenori Maria Novella Ringressi Antonio Taddei Elena Niccolai Simone Baldi Edda Russo Claudio Luchinat Amedeo Amedei 《World Journal of Gastroenterology》 SCIE CAS 2021年第38期6430-6441,共12页
BACKGROUND Colorectal cancer(CRC),the third most common cause of death in both males and females worldwide,shows a positive response to therapy and usually a better prognosis when detected at an early stage.However,th... BACKGROUND Colorectal cancer(CRC),the third most common cause of death in both males and females worldwide,shows a positive response to therapy and usually a better prognosis when detected at an early stage.However,the survival rate declines when the diagnosis is late and the tumor spreads to other organs.Currently,the measures widely used in the clinic are fecal occult blood test and evaluation of serum tumor markers,but the lack of sensitivity and specificity of these markers restricts their use for CRC diagnosis.Due to its high sensitivity and precision,colonoscopy is currently the gold-standard screening technique for CRC,but it is a costly and invasive procedure.Therefore,the implementation of custom-made methodologies including those with minimal invasiveness,protection,and reproducibility is highly desirable.With regard to other screening methods,the screening of fecal samples has several benefits,and metabolomics is a successful method to classify the metabolite shift in living systems as a reaction to pathophysiological influences,genetic modifications,and environmental factors.AIM To characterize the variation groups and potentially recognize some diagnostic markers,we compared with healthy controls(HCs)the fecal nuclear magnetic resonance(NMR)metabolomic profiles of patients with CRC or adenomatous polyposis(AP).METHODS Proton nuclear magnetic resonance spectroscopy was used in combination with multivariate and univariate statistical approaches,to define the fecal metabolic profiles of 32 CRC patients,16 AP patients,and 38 HCs well matched in age,sex,and body mass index.RESULTS NMR metabolomic analyses revealed that fecal sample profiles differed among CRC patients,AP patients,and HCs,and some discriminatory metabolites including acetate,butyrate,propionate,3-hydroxyphenylacetic acid,valine,tyrosine and leucine were identified.CONCLUSION In conclusion,we are confident that our data can be a forerunner for future studies on CRC management,especially the diagnosis and evaluation of the effectiveness of treatments. 展开更多
关键词 Colorectal cancer Adenomatous polyps nuclear magnetic resonance metabolomics Fecal samples Fecal metabolomics
暂未订购
NMR-based metabolomic responses of freshwater gastropod Bellamya aeruginosa to MC-producing and non MC-producing Microcystis aeruginosa
17
作者 Wen YANG Yangfang YE +2 位作者 Kaihong LU Zhongming ZHENG Jinyong ZHU 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2022年第1期260-272,共13页
Molluscan metabolomic analysis is essential for the understanding of the regulatory mechanism of aquatic invertebrate in response to hepatotoxic microcystins(MCs)stress.To understand the system responses of the gastro... Molluscan metabolomic analysis is essential for the understanding of the regulatory mechanism of aquatic invertebrate in response to hepatotoxic microcystins(MCs)stress.To understand the system responses of the gastropod to MC exposure,metabolomic alterations caused by two strains(MC-producing and non MC-producing)of Microcystis aeruginosa were characterized indiff erent biological matrices(hepatopancreas and muscle)of Bellamya aeruginosa(Gastropoda)using 1 H nuclear magnetic resonance(NMR)spectroscopy combined with MCs detections after exposure for 1,7,and 14 d.Although ELISA analysis showed that no MCs was detected in both tissues after non MC-producing M.aeruginosa exposure,MCs concentrations were increasing in the hepatopancreas(from 1.29±0.48μg/g to 3.17±0.11μg/g)and foot muscle(from 0.07±0.02μg/g to 0.21±0.08μg/g)after 14-d exposure of MC-producing M.aeruginosa.Meanwhile,we observed that MC induced signifi cant increase in creatine,a variety of amino acids(leucine,isoleucine,valine,threonine,alanine,methionine,glutamate,aspartate,and lysine),carboxylic acids(lactate,acetate,and D-3-hydroxybutyrate),and choline and its derivatives(phosphocholine and glycerophosphocholine)but decreased the energy substance(lipids,glucose,and glycogen)in the hepatopancreas.However,no signifi cant metabolite diff erences were observed in the muscle between MC-producing and non MC-producing cyanobacteria treated groups.These results suggest that MC exposure may cause hepatic energy expenditure accompanied with various metabolic disorders that involve lipid metabolism,protein catabolism,osmoregulation,glycolysis,glycogenolysis,and tricarboxylic acid(TCA)cycle.Moreover,metabolic perturbation was aggravated as the level of accumulated MCs raised over time in the MC-producing cyanobacteria treatment.These fi ndings indicated that MCs accumulation might lead to oxidative-stress-mediated damage of mitochondria functions. 展开更多
关键词 Bellamya aeruginosa Microcystis aeruginosa metabolomIC nuclear magnetic resonance MICROCYSTIN
在线阅读 下载PDF
基于代谢组学探讨生脉胶囊对5-氟尿嘧啶化疗小鼠肝脏的保护作用和可能机制
18
作者 巩祖妍 李兆栋 +7 位作者 李典 赵舒武 苗琳 王丽明 韩立峰 阎皓 许彦杰 彭雁飞 《天津中医药》 2025年第12期1591-1597,共7页
[目的]探讨生脉胶囊对小鼠化疗性肝损伤的保护作用和分子机制。[方法]比较对照组、化疗组和化疗联合生脉胶囊治疗组小鼠的体质量、肝质量和肝脏指数,检测血清丙氨酸氨基转移酶(ALT)和天冬氨酸氨基转移酶(AST)活性,并对肝脏组织病理形态... [目的]探讨生脉胶囊对小鼠化疗性肝损伤的保护作用和分子机制。[方法]比较对照组、化疗组和化疗联合生脉胶囊治疗组小鼠的体质量、肝质量和肝脏指数,检测血清丙氨酸氨基转移酶(ALT)和天冬氨酸氨基转移酶(AST)活性,并对肝脏组织病理形态学进行检查,应用核磁共振氢谱(1H-NMR)代谢组学分析肝脏差异代谢物,探讨生脉胶囊减轻化疗性肝损伤的可能机制。[结果]化疗联合生脉胶囊显著逆转单纯化疗导致的小鼠体质量、肝质量和肝脏指数的降低,下调血清AST活性,减轻肝组织水肿和嗜酸性样变。代谢组学分析表明,化疗联合生脉胶囊治疗了上调牛磺酸、谷氨酰胺和褪黑素等代谢物的水平,这些差异代谢物主要富集在糖代谢和氨基酸代谢等通路。[结论]生脉胶囊能够通过调节糖代谢和氨基酸代谢减轻小鼠化疗性肝损伤。 展开更多
关键词 化疗性肝损伤 生脉胶囊 核磁共振 代谢组学
暂未订购
Lipoprotein Subfractions Predict All-cause and Cardiovascular Mortality in CKD Patients Undergoing Hemodialysis:A Prospective Cohort Study Based on NMR Metabolomics
19
作者 Qingxia Huang Han Zhang +9 位作者 Ziyan Shen Jing Chen Xuesen Cao Linghan Xu Cheng Zhu Shiqi Lv Xixi Yu Xiaoqiang Ding Huiru Tang Xiaoyan Zhang 《Phenomics》 2025年第4期361-373,共13页
Lipoprotein metabolism is markedly altered in chronic kidney disease(CKD).Studies on the association between nuclear magnetic resonance(NMR)derived lipoprotein subfraction signature and mortality in CKD patients under... Lipoprotein metabolism is markedly altered in chronic kidney disease(CKD).Studies on the association between nuclear magnetic resonance(NMR)derived lipoprotein subfraction signature and mortality in CKD patients undergoing hemodialysis are limited.NMR based metabolomics was performed on the baseline plasma samples from 368 maintenance hemodialysis patients.Survival analyses were used to investigate the effect of lipoproteins on all-cause mortality and cardiovascular disease(CVD)mortality.Prediction models were further developed using stepwise regression combined cox proportional-hazards model.During the average follow-up of 45.1 months,we observed 144 all-cause deaths and 67 CVD deaths.After adjustment for 14 important covariates,we identified 18 and 35 lipoprotein parameters associated with all-cause mortality and CVD mortality,separately.Cholesterol in total low-density lipoprotein(LDL-C)and total high-density lipoprotein(HDL-C)were correlated with neither all-cause death nor CVD death.For lipoprotein subfractions,triglyceride levels in large very-low density lipoprotein(VLDL)were positively correlated only with all-cause mortality.Lipids(triglyceride,cholesterol and phospholipid)in medium VLDL,cholesterol/total lipids in intermediate-density lipoprotein(IDL)and free cholesterol/total lipids in small high-density lipoprotein(HDL)were positively associated with both all-cause and CVD mortality.The addition of lipoprotein parameters to traditional risk factors significantly improved the mortality risk prediction:the area under the receiver operating characteristic curve(AUC)was improved from 0.811 to 0.842(p-value=0.020)for all-cause mortality and 0.806 to 0.854(p-value=0.005)for CVD mortality.Our results highlight the lipoprotein subfractions related to all-cause and CVD mortality of maintenance hemodialysis patients,and the lipoproteins-driven prediction models significantly outperform traditional risk factors. 展开更多
关键词 LIPOPROTEIN LIPID nuclear magnetic resonance metabolomics Cardiovascular disease Chronic kidney disease
暂未订购
尿液代谢组学研究技术进展及其在癌症诊断中的应用
20
作者 陈凌云 陈文嵩 +1 位作者 孙勤强 訾金 《基础医学与临床》 2025年第8期999-1009,共11页
尿液代谢组学是发现非侵入性生物标志物的重要途径,它可以检测特定疾病发生过程中或治疗干预前后的代谢物差异,为疾病的早期诊断、预防及个体化治疗提供新的思路。与其他体液样本相比,尿液样本的特点是易于收集、代谢物丰富以及能够及... 尿液代谢组学是发现非侵入性生物标志物的重要途径,它可以检测特定疾病发生过程中或治疗干预前后的代谢物差异,为疾病的早期诊断、预防及个体化治疗提供新的思路。与其他体液样本相比,尿液样本的特点是易于收集、代谢物丰富以及能够及时反映体内生化代谢途径的变化。在尿液代谢组学的研究中需要严格按照标准进行样本的采集和保存。核磁共振(NMR)和质谱(MS)是尿液代谢组学研究的主要分析技术。由于尿液样本中代谢物复杂,需要根据具体的研究目标选择合适的分析技术,或结合多种技术以提高对代谢物分析的全面性和准确性。本文对现有研究报道进行综述,以了解尿液代谢组学研究相关的主要技术进展及其在癌症风险检测中的应用。 展开更多
关键词 尿液代谢组学 核磁共振 质谱 癌症诊断
在线阅读 下载PDF
上一页 1 2 7 下一页 到第
使用帮助 返回顶部