Unconditional and conditional QTL mapping were conducted for growth duration (GD), plant height (PH) and effective panicle number per plant (PN) using a recombinant inbred line (RIL) population derived from a cross be...Unconditional and conditional QTL mapping were conducted for growth duration (GD), plant height (PH) and effective panicle number per plant (PN) using a recombinant inbred line (RIL) population derived from a cross between two japonica rice varieties Xiushui 79 and C Bao. The RIL population consisted of 254 lines was planted in two environments, Nanjing and Sihong, Jiangsu Province, China. Results showed that additive effects were major in all of QTLs for GD, PH and PN detected by the two methods, and the epistatic effects explained a small proportion of phenotypic variation. No interactions were detected between additive QTL and environment, and between epistatic QTL pairs and environment. After growth duration was adjusted to an identical level, RM80-160bp was detected as an applicable elite allele for PN, with an additive effect of 0.71. When effective panicle number per plant was adjusted to an identical level, RM448-240bp was detected as an applicable elite allele for GD, with an additive effect of 4.64. After plant height was adjusted to an identical level, RM80-160bp was detected as an applicable elite allele for PN, with an additive effect of 0.62, and RM448-240bp was detected as an applicable elite allele for GD, with an additive effect of 3.89. These applicable elite alleles could be used to improve target traits without influencing the other two traits.展开更多
To provide genetic information and materials for breeding hybrid japonica rice with wide adaptability and strong competitive advantage of yield, elite alleles and their carrier varieties of growth duration （GD） and ...To provide genetic information and materials for breeding hybrid japonica rice with wide adaptability and strong competitive advantage of yield, elite alleles and their carrier varieties of growth duration （GD） and productive panicle number per plant （PN） were detected. A natural population composed of 94 japonica varieties was phenotyped for the GD, PN and plant height （PH） in two environments. The conditional phenotypic data were transferred by the linear model method in software QGAStation 1.0, and association mapping based on the unconditional and conditional phenotype values of GD and PN was analyzed by using general linear model in software TASSEL. A total of 34 simple sequence repeat （SSR） marker loci associated with GD and PN were detected in the two environments. Among them, 15 were associated with GD, and 19 were associated with PN. Four elite alleles of RM8095-120bp, RM7102-176bp, RM72-170bp and RM72-178bp were associated with GD, and their carrier varieties were Hongmangshajing, Nipponbare, Hongmangshajing and Nannongjing 62401, respectively. These elite alleles from the carrier varieties can shorten GD by 2.03-9.93 d when they were introduced into improved materials. RM72-182bp associated with PN was an elite allele, and its carrier variety was Xiaoqingzhong. It can increase PN by three when introduced into improved materials. Moreover, these elite alleles can be used to improve target traits without influencing another two traits.展开更多
This paper presents an analysis of four open-source Global Digital Elevation Models (GDEMs) and compares them on two topographic profiles (nearly flat, and hills regions) for mapping and geomatics applications. The ch...This paper presents an analysis of four open-source Global Digital Elevation Models (GDEMs) and compares them on two topographic profiles (nearly flat, and hills regions) for mapping and geomatics applications. The chief intention is to investigate if GDEMs-based heights, contour intervals, slopes, and topographic profiles are valid for all map scales of topographic mapping, which constitutes a major issue in mapping activities. Two case studies, the Nile delta in Egypt and Makkah city in Saudi Arabia, have been utilized to represent flat and moderate-topography patterns. The investigated GDEMs include the most-recent released models: ASTER v.3, ACE 2, SRTMGL1 v.3, and NASADEM_HGT v.1 released in 2019 and 2020 with spatial resolutions of 1 and 3 arc seconds. Available accurate Ground Control Points (GCP) consist of 540 stations in the Nile delta and 175 stations in Makkah. Based on the available datasets in two study areas, it has been found that the accuracy of investigated GDEMs over known checkpoints ranges from ±2.5 and ±5.1 meters in the Nile delta region, while it varies between ±5.1 and ±8.0 meters in the Makkah area. That indicates that the utilization of GDEMs in topographic mapping differs significantly between flat and hilly spatial regions. Therefore, it is recommended to avoid using GDEMs for developing topographic maps of scale 1:25,000 or larger in flat regions and map scale 1:50,000 or larger in hilly regions. Additionally, the accomplished results showed that all GDEM-based slopes do not match with the actual slopes from known GCP over cross section’s length up to 30 kilometers. Thus, it is concluded that GDEMs are not the appropriate heights’ source for topographic mapping at medium and large map scales, and could not be utilized for topographic profiling in precise engineering and geomatics applications.展开更多
According to the characteristic of global positioning system（GPS） reflection signals,a GPS delay mapping receiver system scheme is put forward,which not only satisfies the unmanned aerial vehicle（UAV） guidance loc...According to the characteristic of global positioning system（GPS） reflection signals,a GPS delay mapping receiver system scheme is put forward,which not only satisfies the unmanned aerial vehicle（UAV） guidance localization but also realizes height measurement.A code delay algorithm is put forward,which processes the direct and land reflected signal and outputs the navigation data and specular point.The GPS terrain reflected echo signal mathematical equation is inferred.The reflecting signal area,when the GPS signal passes the land,is analyzed.The height survey model reflected land surface characteristic is established.A simulation system which carries guidance localization of the UAV and the height measuring control through the GPS direct signal and the land reflected signal is designed,taken the GPS satellite as the illumination source,the receiver is put on the UAV.Then the UAV guidance signal,the GPS reflection signal and receiver＇s parallel processing are realized.The parallel processing reduces UAV＇s payload and raises system＇s operating efficiency.The simulation results confirms the validity of the model and also provides the basis for the UAV＇s optimization design.展开更多
为了比较不同密度单核苷酸多态性(SNP)芯片的数量性状位点(QTL)作图效率,本研究基于Maize SNP 3K和48K芯片对来源于R08×掖478的271个重组自交系(RIL)群体进行基因分型,采用完备区间作图法定位四个环境和两种种植密度条件下玉米株...为了比较不同密度单核苷酸多态性(SNP)芯片的数量性状位点(QTL)作图效率,本研究基于Maize SNP 3K和48K芯片对来源于R08×掖478的271个重组自交系(RIL)群体进行基因分型,采用完备区间作图法定位四个环境和两种种植密度条件下玉米株高相关性状的QTL。结果表明,利用48K SNP芯片分型结果构建的遗传图谱分辨率高于3K(标记数:2 804个bin vs 683个SNP;图谱长:3 863.77 cM vs 1 786.06 cM;标记平均间距:1.38 cM vs 2.65 cM)。基于48K-遗传图谱在高低种植密度下定位到的QTL较3K-遗传图谱多近40%(86/62),两者共定位到28个位置相同的QTL,约占48K-遗传图谱检测到QTL总数的32.6%和3K-遗传图谱检测到QTL总数的45.2%。利用48K-遗传图谱在高种植密度下检出51个QTL,低种植密度下检出60个QTL,其中密度钝感型QTL为25个。基于高密度标记芯片作图具有更高的效率,可用于高效解析玉米数量性状。本研究结果为玉米耐密候选基因的进一步精细定位提供了理论支撑。展开更多
基金supported by the Program of National High Technology Research and Development, Ministry of Science and Technology, China (Grant No. 2010AA101301)the Program of Introducing Talents of Discipline to University in China (Grant No. B08025)+1 种基金the Program of Introducing International Advanced Agricultural Science and Technology in China (Grant No. 2006-G8 [4]-31-1) the Program of Science-Technology Basis and Conditional Platform in China (Grant No. 505005)
文摘Unconditional and conditional QTL mapping were conducted for growth duration (GD), plant height (PH) and effective panicle number per plant (PN) using a recombinant inbred line (RIL) population derived from a cross between two japonica rice varieties Xiushui 79 and C Bao. The RIL population consisted of 254 lines was planted in two environments, Nanjing and Sihong, Jiangsu Province, China. Results showed that additive effects were major in all of QTLs for GD, PH and PN detected by the two methods, and the epistatic effects explained a small proportion of phenotypic variation. No interactions were detected between additive QTL and environment, and between epistatic QTL pairs and environment. After growth duration was adjusted to an identical level, RM80-160bp was detected as an applicable elite allele for PN, with an additive effect of 0.71. When effective panicle number per plant was adjusted to an identical level, RM448-240bp was detected as an applicable elite allele for GD, with an additive effect of 4.64. After plant height was adjusted to an identical level, RM80-160bp was detected as an applicable elite allele for PN, with an additive effect of 0.62, and RM448-240bp was detected as an applicable elite allele for GD, with an additive effect of 3.89. These applicable elite alleles could be used to improve target traits without influencing the other two traits.
基金supported by the Program of National High Technology Research and Development,Ministry of Science and Technology,China(Grant No.2010AA101301)the Program of Introducing Talents of Discipline to University in China(Grant No.B08025)+1 种基金the Program of Introducing International Advanced Agricultural Science and Technology in China(Grant No.2006-G8[4]-31-1)the Program of Science-Technology Basis and Conditional Platform in China(Grant No.505005)
文摘To provide genetic information and materials for breeding hybrid japonica rice with wide adaptability and strong competitive advantage of yield, elite alleles and their carrier varieties of growth duration （GD） and productive panicle number per plant （PN） were detected. A natural population composed of 94 japonica varieties was phenotyped for the GD, PN and plant height （PH） in two environments. The conditional phenotypic data were transferred by the linear model method in software QGAStation 1.0, and association mapping based on the unconditional and conditional phenotype values of GD and PN was analyzed by using general linear model in software TASSEL. A total of 34 simple sequence repeat （SSR） marker loci associated with GD and PN were detected in the two environments. Among them, 15 were associated with GD, and 19 were associated with PN. Four elite alleles of RM8095-120bp, RM7102-176bp, RM72-170bp and RM72-178bp were associated with GD, and their carrier varieties were Hongmangshajing, Nipponbare, Hongmangshajing and Nannongjing 62401, respectively. These elite alleles from the carrier varieties can shorten GD by 2.03-9.93 d when they were introduced into improved materials. RM72-182bp associated with PN was an elite allele, and its carrier variety was Xiaoqingzhong. It can increase PN by three when introduced into improved materials. Moreover, these elite alleles can be used to improve target traits without influencing another two traits.
文摘This paper presents an analysis of four open-source Global Digital Elevation Models (GDEMs) and compares them on two topographic profiles (nearly flat, and hills regions) for mapping and geomatics applications. The chief intention is to investigate if GDEMs-based heights, contour intervals, slopes, and topographic profiles are valid for all map scales of topographic mapping, which constitutes a major issue in mapping activities. Two case studies, the Nile delta in Egypt and Makkah city in Saudi Arabia, have been utilized to represent flat and moderate-topography patterns. The investigated GDEMs include the most-recent released models: ASTER v.3, ACE 2, SRTMGL1 v.3, and NASADEM_HGT v.1 released in 2019 and 2020 with spatial resolutions of 1 and 3 arc seconds. Available accurate Ground Control Points (GCP) consist of 540 stations in the Nile delta and 175 stations in Makkah. Based on the available datasets in two study areas, it has been found that the accuracy of investigated GDEMs over known checkpoints ranges from ±2.5 and ±5.1 meters in the Nile delta region, while it varies between ±5.1 and ±8.0 meters in the Makkah area. That indicates that the utilization of GDEMs in topographic mapping differs significantly between flat and hilly spatial regions. Therefore, it is recommended to avoid using GDEMs for developing topographic maps of scale 1:25,000 or larger in flat regions and map scale 1:50,000 or larger in hilly regions. Additionally, the accomplished results showed that all GDEM-based slopes do not match with the actual slopes from known GCP over cross section’s length up to 30 kilometers. Thus, it is concluded that GDEMs are not the appropriate heights’ source for topographic mapping at medium and large map scales, and could not be utilized for topographic profiling in precise engineering and geomatics applications.
基金supported by the National High Technology Researchand Development Program of China(863 Program)(2008AA12A216)
文摘According to the characteristic of global positioning system（GPS） reflection signals,a GPS delay mapping receiver system scheme is put forward,which not only satisfies the unmanned aerial vehicle（UAV） guidance localization but also realizes height measurement.A code delay algorithm is put forward,which processes the direct and land reflected signal and outputs the navigation data and specular point.The GPS terrain reflected echo signal mathematical equation is inferred.The reflecting signal area,when the GPS signal passes the land,is analyzed.The height survey model reflected land surface characteristic is established.A simulation system which carries guidance localization of the UAV and the height measuring control through the GPS direct signal and the land reflected signal is designed,taken the GPS satellite as the illumination source,the receiver is put on the UAV.Then the UAV guidance signal,the GPS reflection signal and receiver＇s parallel processing are realized.The parallel processing reduces UAV＇s payload and raises system＇s operating efficiency.The simulation results confirms the validity of the model and also provides the basis for the UAV＇s optimization design.
文摘为了比较不同密度单核苷酸多态性(SNP)芯片的数量性状位点(QTL)作图效率,本研究基于Maize SNP 3K和48K芯片对来源于R08×掖478的271个重组自交系(RIL)群体进行基因分型,采用完备区间作图法定位四个环境和两种种植密度条件下玉米株高相关性状的QTL。结果表明,利用48K SNP芯片分型结果构建的遗传图谱分辨率高于3K(标记数:2 804个bin vs 683个SNP;图谱长:3 863.77 cM vs 1 786.06 cM;标记平均间距:1.38 cM vs 2.65 cM)。基于48K-遗传图谱在高低种植密度下定位到的QTL较3K-遗传图谱多近40%(86/62),两者共定位到28个位置相同的QTL,约占48K-遗传图谱检测到QTL总数的32.6%和3K-遗传图谱检测到QTL总数的45.2%。利用48K-遗传图谱在高种植密度下检出51个QTL,低种植密度下检出60个QTL,其中密度钝感型QTL为25个。基于高密度标记芯片作图具有更高的效率,可用于高效解析玉米数量性状。本研究结果为玉米耐密候选基因的进一步精细定位提供了理论支撑。
