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Mitochondrial phylogenomics provides insights into the phylogeny and evolution of spiders(Arthropoda:Araneae)

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摘要 Spiders are among the most varied terrestrial predators,with highly diverse morphology,ecology,and behavior.Morphological and molecular data have greatly contributed to advances in the phylogeny and evolutionary dynamics of spiders.Here,we performed comprehensive mitochondrial phylogenomics analysis on 78 mitochondrial genomes(mitogenomes)representing 29 families;of these,23 species from eight families were newly generated.Mesothelae retained the same gene arrangement as the arthropod ancestor(Limulus polyphemus),while Opisthothelae showed extensive rearrangement,with 12 rearrangement types in transfer RNAs(tRNAs)and control region.Most spider tRNAs were extremely truncated and lacked typical dihydrouridine or TΨC arms,showing high tRNA structural diversity;in particular,trnS1 exhibited anticodon diversity across the phylogeny.The evolutionary rates of mitochondrial genes were potentially associated with gene rearrangement or truncated tRNAs.Both mitogenomic sequences and rearrangements possessed phylogenetic characteristics,providing a robust backbone for spider phylogeny,as previously reported.The monophyly of suborder,infraorder,retrolateral tibial apophysis clade,and families(except for Pisauridae)was separately supported,and high-level relationships were resolved as(Mesothelae,(Mygalomorphae,(Entelegynae,(Synspermiata,Hypochilidae)))).The phylogenetic positions of several families were also resolved(e.g.,Eresidae,Oecobiidae and Titanoecidae).Two reconstructions of ancestral web type obtained almost identical results,indicating that the common ancestor of spiders likely foraged using a silk-lined burrow.This study,the largest mitochondrial phylogenomics analysis of spiders to date,highlights the usefulness of mitogenomic data not only for providing efficient phylogenetic signals for spider phylogeny,but also for characterizing trait diversification in spider evolution.
出处 《Zoological Research》 SCIE CAS CSCD 2022年第4期566-584,共19页 动物学研究(英文)
基金 supported by the Second Tibetan Plateau Scientific Expedition and Research(STEP)Program(2019QZKK0302) Natural Science Foundation of Gansu Province(20JR5RA252) Innovation and Entrepreneurship Project of Lanzhou University(20210010020,20210010002)。
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  • 1Boore JL. 1999. Animal mitochondrial genomes. Nucleic Acids Research, 27:1767 1780.
  • 2Boore JL. 2006. The use of genome-level characters for phylogenetic reconstruction. Trends' in Ecology and Evolution, 21 : 439:446.
  • 3Cameron SL, Whiting MF. 2008. The complete mitochondrial genome of the tobacco hornworm, Manduca sexta (lnsecta: Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths. Gene, 408:112-123.
  • 4Cannone JJ, Subramanian S, Schnare MN, Collett JR, D'Souza LM, Du Y, Feng B, Lin N, Madabusi LV, Mtiller KM, Pande N, Shang Z, Yu N, Gutell RR. 2002. The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs BMC Bioinformatics, 3:15.
  • 5Clary DO, Wolstenholme DR. 1985. The mitochondrial DNA molecular of Drosophila yakuba: nucleotide sequence, gene organization and genetic code. Journal of Molecular Evolution, 22: 252-271.
  • 6Comas D, P:i:ibo S, Bertranpetit J. 1995. Heteroplasmy in the control region of human mitochondrial DNA. Genome Research, 5: 89-90.
  • 7Dowton M, Castro LR, Austin AD. 2002. Mitochondrial gene rearrangements as phylogenetic characters in the invertebrates: the examination ofgenome 'morphology'. Invertebrate Systematics, 16: 345-356.
  • 8Fenn JD, Cameron SL, Whiting MF. 2007. The complete mitochondrial genome sequence of the Mormon cricket (Anabrus simplex: Tettigoniidae: Orthoptera) and an analysis of control region variability, lnsect Molecular Biology, 16: 239-252.
  • 9Gillespie J J, Johnston JS, Cannone JJ, Gutell RR. 2006. Characteristics of the nuclear (18S, 5.8S, 28S and 5S) and mitochondrial (12S and 16S) rRNA genes of .4pis mellifera (Insecta: Hymenoptera): Structure, organization and retrotransposable elements. Insect Molecular Biology, 15: 657-686.
  • 10Gissi C, Iannelli F, Pesole G: 2008. Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species. Heredity, 101: 301-320.

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