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编码中华绒螯蟹蜕皮抑制激素基因的cDNA片段克隆和序列分析 被引量:15

MOLECULAR CLONING AND SEQUENCE ANALYSIS OF cDNA ENCODING PARTIAL PUTATIVE MOLT-INHIBITING HORMONE FROM THE CRAB ERIOCHEIR SINENSIS
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摘要 于 2 0 0 0年 3月提取中华绒螯蟹眼柄总RNA ,以此为模板 ,根据日本对虾的神经肽Pej SG Ⅳ设计兼并引物 ,进行RT PCR扩增 ,在适宜的反应条件下 ,获得一特异性的产物 ,将该片段克隆到载体中进行测序。结果表明 ,中华绒螯蟹特异性cDNA片段由 2 1 3个碱基组成。在生物信息数据库中查找由该cDNA推定的氨基酸序列的相似序列 ,可以发现有大量甲壳动物的CHH家族神经肽与它相似。在所有相似序列中 ,甲壳动物的蜕皮抑制激素 (MIH)与它的相似度最高 ,这一结果提示由中华绒螯蟹的眼柄特异性cDNA片段推定的氨基酸序列可能是它的MIH片段。 Total RNAs were extracted from eyestalks of the crab Eriocheir sinensis. Eyestalk complementary DNAs were obtained from these total RNAs by reverse transcription. Based on the amino acid sequence of Pej SG Ⅳ from Penaeus japonicus, two degenerate primers were designed. Reverse Transcriptase Polymerase Chain Reaction (RT PCR) was performed by using these eyestalk cDNAs and the degenerate primers. A specific cDNA was cloned under proper reaction conditions. The specific cDNA was subcloned into pUCm T vector for sequencing. The sequencing results demonstrated that the specific cDNA from the crab E.sinensis consists of 213 base pairs. The alignment of the deduced amino acid sequence from eyestalk cDNA of the crab E.sinensis with neuropeptides of CHH family from various crustaceans demonstrates that it has the highest identity and homology with most MIHs from other crustaceans. The highest and the second highest amino acid identity percentages with MIH from the shrimp Metapenaeus ensis and P.japonicus are 71.8% and 70.4%, respectively. It suggests that the deduced amino acid sequence from eyestalk cDNA of the crab E.sinensis is a part of its MIH neuropeptide of E.sinensis.
出处 《海洋与湖沼》 CAS CSCD 北大核心 2002年第4期432-438,共7页 Oceanologia Et Limnologia Sinica
基金 中国科学院知识创新工程项目 ZKCX 2 1 1号 国家自然科学基金资助项目 40 1 0 60 1 8号 山东省重点资助项目 0 1 1 1 1 0 1 0 4号
关键词 中华绒螯蟹 蜕皮抑制激素 CDNA克隆 序列分析 生物信息数据库 甲壳动物 Eriocheir sinensis, Molt inhibiting hormone, Complementary DNA cloning, Sequence analysis
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