期刊文献+

番茄细菌性叶斑病菌超分支滚环扩增快速检测技术 被引量:2

Rapid detection of Pseudomonas syringae pv.tomato using hyperbranched rolling circle amplification
在线阅读 下载PDF
导出
摘要 根据番茄细菌性叶斑病菌(Pseudomonas syringae pv.tomato,Pst)的一段特异蛋白基因序列,按照锁式探针的设计原理设计探针和扩增引物,优化系列反应条件,建立了特异性的Pst超分支滚环扩增技术。试验结果表明:该检测技术能够从供试的10种不同的病原菌中特异性地检测出番茄细菌性叶斑病菌,DNA检测的最低浓度为500fg/μL,检测灵敏度高于常规PCR。 A padlock probe was designed based on the sequence of the unique hypothetic protein gene in the complete genome of Pseudomonas syringae pv.tomato (Pst),according to the design principle of padlock probe and primers.Detection system of hyperbranched rolling circle amplification (HRCA) was established and optimized.The results showed that Pst could be specifically detected by this method,while other reference plant pathogens could not be detected.The detection sensitivity of HRCA was about 500 fg/μL of DNA concentration,higher than that of the conventional PCR method.
出处 《植物保护》 CAS CSCD 北大核心 2014年第2期90-94,122,共6页 Plant Protection
基金 国家质检总局项目(20011K158) 国家自然科学基金项目(30671463) 福建省发改委项目(KY0030060)
关键词 番茄细菌性叶斑病菌 超分支滚环扩增 锁式探针 Pseudomonas syringae pv.tomato hyperbranched rolling circle amplification padlock probe
  • 相关文献

参考文献21

  • 1Schneider R W, Grogan R G. Bacterial speck of tomato: sources of inoculum and establishment of a resident population [J]. Phytopathology, 1977,67 : 388 - 394.
  • 2Wilson M,Campbell P J,Jones J B, et al. Biological control of bacte- rial speck of tomato under field conditions at several locations in North America[J]. Phytopathology, 2002,92:1284 - 1292.
  • 3Cuppels D A, Moore R A, Morris V L. Construction and use of a nonradioactive DNA hybridization probe for detection of Pseudomonas syringae pv. tomato on tomato plants[J]. Ap- plied and Environmental Microbiology, 1990,56 : 1743 - 1749.
  • 4Zaccardelli M, Spasiano A, Bazzi C, et al. Identification and in planta detection of Pseudomonas syringae pv. tomato using PCR amplification of hrpZ(Pst)[J]. European Journal of Plant Pathology, 2005,111 : 85 - 90.
  • 5Nilsson M, Malmgren H, Samiotaki M, et al. Padlock probes: Circularizing oligonucleotides for localized DNA detection [J]. Science, 1994,65 (5181) .. 2085 - 2088.
  • 6Szemes M, Bonants P, Weerdt M D, et al. Diagnostic application of padlock probes-multiplex detection of plant pathogens using uni- versal microarrays[J]. Nucleic Acids Research, 2005,33(8) :e70.
  • 7Lizardi P M, Huang X H, Zhu Z R, et al. Mutation detection and single-molecule counting using isothermal rolling-circle amplification[J]. Nature Genetics, 1998,19 : 225 - 232.
  • 8刘倩,李蓓,文景芝,陈洪俊,葛建军.基于锁式探针的滚环扩增技术在植物病原检测中的应用[J].植物检疫,2009,23(3):38-41. 被引量:7
  • 9赵春燕,易世红,李凡.网状分枝扩增技术快速检测大肠埃希菌O157:H7及其他产志贺样毒素大肠埃希菌[J].吉林大学学报(医学版),2006,32(1):18-22. 被引量:9
  • 10Schopf E, Chen Yong. Attomole DNA detection assay via roll- ing circle amplification and single molecule detection[J]. Ana- lytical Biochemistry,2010,397:115 - 117.

二级参考文献41

  • 1赵春燕,易世红,李凡.网状分枝扩增技术快速检测大肠埃希菌O157:H7及其他产志贺样毒素大肠埃希菌[J].吉林大学学报(医学版),2006,32(1):18-22. 被引量:9
  • 2张福明,李凡,张淑芹.网状分枝扩增法检测EB病毒基因及临床应用研究[J].中国实验诊断学,2006,10(3):221-224. 被引量:2
  • 3乔婉琼,周东蕊,杨耀,陆祖宏.滚环扩增原理及其在医药领域的应用[J].中国药科大学学报,2006,37(3):201-205. 被引量:6
  • 4Kuhn H, Demidov V V, Frank - Kamenetskii M D. Rolling - circle amplification under topological constraints. Nucleic Acids Res, 2002,30:574 -580
  • 5Zhang D Y, Brandwein M , Hsuih T C , et al. Amplification of target- specific , ligation - dependent circular probe [ J ]. Gene , 1998 ,211:277-285.
  • 6Nilsson M, Malmgren H, Samiotaki M,et al. PadlockProbes: Circularizing Oligonucleotides for Localized DNA Detection. Science, 1994,265:2085-2088.
  • 7Lizardi P M, Huang X, Zhu Z , et al . Mutation detection and single molecule counting using isothermal rolling circle amplification [ J ]. Nat Genet 1998 ,19(3) :225-232.
  • 8Baner J, Nilsson M, Hartvig M M, Landegren U. Signal amplification of padlock probes by rolling cycling replication. NuclAcids Res, 1998,26(22) : 5073-5078.
  • 9Szemes M, Bonants P , Weerdt M, et al . Diagnostic application of padlock probes - multiplex detection of plant pathogens using universal microarrays[J]. Nucl Acid Res , 2005 ,33(8) :701.
  • 10Thomas D, Nardone G, Randall S. Amplification of padlock probes for DNA diagnostics by cascade roiling circle amplificaton or the polymerase chain reaction. Arch Pathol LabMed ,1999 ,123 : 1170-1176.

共引文献28

同被引文献25

  • 1杨军,尹启生,宋纪真,侯明生.植物病原细菌的hrp基因[J].遗传,2005,27(5):852-858. 被引量:12
  • 2王晓辉,李国英,任毓忠,薛小伟,黄素芳.新疆加工番茄细菌性斑点病病原鉴定[J].西北农业学报,2006,15(2):72-74. 被引量:8
  • 3BUDDENHAGEN I, KELMAN A. Biological and physiological aspects of bacterial wilt caused by Pseudomonas solanacearum [ J ]. Annual Review of Phytopathology, 1964,2:203 - 230.
  • 4BUDDENHAGEN I W. Strain of Pseudomonas solanacearum in indigenous hosts in banana plantations of Costa Rica, and their relationship to bacterial wilt of bananas[ J]. Phytopathology, 1960,50(9) :660 - 664.
  • 5BUDDENHAGEN I W, SEQUEIRA L, KELMAN A. Designation of races in Pseudomonas solanacearum[J]. Phytopathology, 1962,52:726.
  • 6DIATLOFF A, AKIEW E, WOOD B, et al. Characteristics of isolates ofRalstonia solanacearum from Heliconia[J]. Australa- sian Plant Pathol, 1992,21:163 - 168.
  • 7NILSSON M, MALMGREN H, SAMIOTAKI M, et at. Padlock probes : Circularizing oligonucleotides for localized DNA detec- tion [ J ]. Science, 1994,265 ( 5181 ) : 2085 - 2088.
  • 8SZEMES M, BONANTS P, WEERDT M D, et al. Diagnostic application of padlock probes-multiplex detection of plant patho- gens using universal microarrays [ J ]. Nucleic Acids Research, 2005,33 ( 8 ) :70 - 74.
  • 9LIZARDI P M, HUANG X H, ZHU Z R, et al. Mutation detection and single-molecule counting using isothermal wiling-circle amplification[ J]. Nature Genetics, 1998,19:225 - 232.
  • 10LEE Y A, KI-IOR C N. A novel insertion sequence, ISRsolg, isolated from Ralstonia solanacearum and its application to race differentiation[ J ]. Plant Pathology Bulletin, 2003,12:57 - 64.

引证文献2

二级引证文献22

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部