期刊文献+

钙蛋白酶3(CAPN3)基因多态性与牛胴体性状的关联分析 被引量:7

Genetic Variation in CAPN3 Gene and Its Relationship with Carcass Traits in Cattle
在线阅读 下载PDF
导出
摘要 为了探讨钙蛋白酶3(Calpain3,CAPN3)基因作为影响牛肉质性状候选基因的可能性,寻找与牛肉质性状相关的分子标记,对CAPN3基因的5′端区域进行SNPs检测,分析不同基因型在不同品种或者组合群体间的分布规律。利用测序和PCR-RFLP的方法进行SNPs检测和基因型分析,计算等位基因频率、各位点多态信息含量。结果发现,2546位处发生点突变C→T。各位点的3种基因型与牛生产性状的最小二乘分析结果表明,AB与BB基因型个体在胴体质量指标上存在显著差异(P<0.05)。初步推断CAPN3基因可能是影响牛肉质性状潜在的主效基因或与主效基因连锁,并且这个位点具有成为分子标记的潜在可能。 The 5'UTR of CAPN3(Calpain3)gene was detected for searching SNPs and analyzing the distribution rule of different genotypes in different breeds,in order to study the relationship between CAPN3 gene and meat quality,meanwhile,searching the markers correlated with meat quality.SNPs were screened by sequencing and different genotypes were determined by polymerase chain reaction-restriction fragment length polymorphism(PCR-RFLP),then allele frequencies and polymorphism information content(PIC)were calculated.The result indicated that a new SNP(C→T)was found at 2 546 bp.The analysis result of the relationship between genotypes and productive performances by the Least Square Method(LSM)showed that the difference between AB and BB genotypes in carcass weight was significant(P0.05).CAPN3 gene was primarily deduced to be a potential major gene or linked to major gene effecting meat quality traits.And this SNP might be a potential molecular marker of MAS.
出处 《畜牧兽医学报》 CAS CSCD 北大核心 2010年第4期398-402,共5页 ACTA VETERINARIA ET ZOOTECHNICA SINICA
基金 中国热带农业科学院中央级公益性科研院所基本科研业务费专项(PZS-013) 畜禽种质资源共享平台建设项目(2005DKA21101)
关键词 CAPN3 PCR-RFLP 胴体性状 SNP CAPN3 cattle PCR-RFLP carcass traits SNP
  • 相关文献

参考文献10

  • 1SORIMACHI H,IMAJOH-OHMI S,EMORI Y,et al.Molecular cloning of a novel mammalian calcium-dependent protease distinct from both m-and ?types.Specific expression of the mRNA in skeletal muscle[J].Journal Biology Chemistry,1989,264:20106-20111.
  • 2LABEIT S,KOLMERER B,LINKE W A.The giant protein titin:Emerging roles in physiology and pathophysiology[J].Circulation Research,1997,80 (2):284-290.
  • 3ILIAN M A,MORTON J D,KENT M P,et al.In-termuscular variation in tenderness:Association with the ubiquitous and muscle specific calpain[J].Journal of Animal Science,2001a,79(1):122-132.
  • 4ILIAN M A,MORTON J D,BEKHIT A E,et al.Effect of preslaughter feed withdrawal period on lon-gissimus tenderness and the expression of calpains in the ovine[J].Journal of Agricultural and Food Chemistry,2001b,49(4):1990-1998.
  • 5STEVENSON B J,MORTON J D,ILIAN M A,et al.Effect of muscle stretehing on titin and calpain 3:implication for tenderness[C].In Proceedings 48th International Congress of Meat Science and Technology,Rome,Italy,2002:598-599.
  • 6ILIAN M A,BEKHIT A E D,BICKERSTAFFE R.The relationship between meat tenderization,myofi-bril fragmentation and autolysis of calpain3 during post-mortem aging[J].Meat Science,2004a,66:387-397.
  • 7ILIAN M A,BICKERSTAFFE R,GREASER M L.Postmortem changes in myofibrillar-bound Calpain3 revealed by immunofluorescence microscopy[J].Meat Science,2004b,66(1):231-240.
  • 8ILIAN M A,BEKHIT A E D,STEVENSON B,et al.Up-and down-regulation of longissimus tenderness parallels enhances in the myofibril-bound cal-pain3 protein[J].Meat Science,2004c,67(3):433-445.
  • 9崔建勋,杜红丽,张细权.利用DNA池和测序技术快速筛查SNPs及估算基因频率[J].Acta Genetica Sinica,2005,32(4):372-377. 被引量:32
  • 10BARENDSE W,HARRISON B E,BUNCH R J,et al.Variation at the Calpain 3 gene is associated with meat tenderness in zebu and composite breeds of cat-tle[J].BMCGenetics,2008,9(41),1-8.

二级参考文献18

  • 1Jones A C,Sampson J R,Cheadle J P.Low level mosaicism detectable by DHPLC but not by direct sequencing.Hum Mutat,2001,17(3):233~234.
  • 2Pareek C S,Pareek R S,Walawski K.Novel linkage mapping approach using DNA pooling in human and animal genetics.II.Detection of quantitative traits loci in dairy cattle.Appl Genet,2002,43(3):309 ~ 318.
  • 3Ohkubo T,Tanaka M,Nakashima K.Molecular cloning of the chicken prolactin gene and activation by Pit-1 and cAMP-induced factor in GH3 cells.Gen Comp Endocrinol,2000,119(2):208 ~ 216.
  • 4Brookes A J.The essence of SNPs. Gene, 1999, 234: 177~186.
  • 5Kristensen V N,Kelefiotis D,Kristensen T,Borresen-Dale A L.High-throughput methods for detection of genetic variation.Biotechniques,2001,30(2):318 ~ 322.
  • 6Bansal A,van den Boom D,Kammerer S,Honisch C,Adam G,Cantor C R,Kleyn P,Braun A.Association testing by DNA pooling: an effective initial screen.Proc Natl Acad Sci USA,2002,99(26):16871 ~ 16874.
  • 7Sham P,Bader J S,Craig I,O'Donovan M,Owen M.DNA pooling: a tool for large-scale association studies.Nat Rev Genet,2002,3(11):862 ~ 871.
  • 8Hoogendoorn B,Norton N,Kirov G,Williams N,Hamshere M L,Spurlock G,Austin J,Stephens M K,Buckland P R,Owen M J,O'Donovan M C.Cheap,accurate and rapid allele frequency estimation of single nucleotide polymorphisms by primer extension and DHPLC in DNA pools.Hum Genet,2000,107:488 ~ 493.
  • 9Sasaki T,Tahira T,Suzuki A,Higasa K,Kukita Y,Baba S,Hayashi K.Precise estimation of allele frequencies of single-nucleotide polymorphisms by a quantitative SSCP an- alysis of pooled DNA.Am J Hum Genet,2001,68:214~218.
  • 10Ross P,Hall L,Haff L A.Quantitative approach to single-nucleotide polymorphism analysis using MALDI-TOF mass spectrometry.Biotechniques,2000,29:620~626.

共引文献31

同被引文献269

引证文献7

二级引证文献40

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部