期刊文献+

广州市一起水禽H5N1疫情禽流感病毒血凝素基因分析 被引量:2

Analysis of HA Gene of H5N1 Influenza Virus from An Avian Influenza Outbreak in Water Fowl in Guangzhou
暂未订购
导出
摘要 目的了解广州市一起水禽H5N1疫情中高致病性禽流感H5N1亚型病毒血凝素(HA)基因的特点以及与其他毒株序列间的关系。方法自疫点采集97份咽拭子标本及84份环境拭子标本,实时荧光RT-PCR检测H5核酸,从阳性标本中扩增全长HA基因并作序列测定,同2006年广州市及国内其他地区报道的人禽流感病毒HA基因进行比较并作系统发生分析。结果从一份环境拭子中扩增获得一株H5N1禽流感病毒HA基因,系统发生树分析发现与广州市2006年人禽流感病毒HA序列一致性较高,且与国内其他地区报道的H5N1病毒HA基因属于同一组;从基因序列推导出HA的氨基酸序列,发现其受体特异性为禽源的,蛋白酶水解位点含有多个连续的碱性氨基酸,符合高致病性禽流感病毒的特征。结论引发此次禽间禽流感的为高致病性H5N1病毒,和广州市人禽流感的H5N1病毒在遗传上有紧密的亲缘关系。禽源性的H5N1病毒仍存在感染人类的可能性,禽类从业人员目前处于感染高致病性禽流感的高危状态,进一步加强对活禽市场和禽类从业人员的监测,对于预防禽流感的流行具有重要意义。 [Abstract] Objective To characterize the hemagglutinin (HA) gene of high pathogenic avian influenza viruses (HPAIV) from an outbreak in water fowl in Guangzhou, and to analyse the phylogenetie relation with other H5N1 viruses isolated previously. Method 97 throat swabs and 84 environment swabs were collected from the outbreak site. H5 was detected by real-time fluorescent RT-PCR. Whole lenth HA gene was amplified from the positive specimen, thereby sequenced and phylogenetic analyzed with sequences related to human HPAIV infection in Glmngzhou in 2006. Result One HA gene was amplified from a environment specimen. The phylogenetic analysis showed the sequence was genetically close to two sequences gained from human HPAIV infection in Guangzhou in 2006, and these three HA sequences belonged to same clade with other HA sequences from China. The translated amino acid sequence showed the receptor specificity was still avian region. A multiple basic amino acid residuals motif was found in connecting peptide between HA1 and HA2, which was consistent with the feature of high pathogenicity. Conclusion The virus from this outbreak in water fowl was high pathogenic and avian region, butgenetically close to human-infected HSNI viruses. It implicated that the probability of infection of human is still remained, and the avian occupational population is under a huge risk. The surveillance on the live bird markets and avian occupational population is very important for predicting and prevention of the epidemic of avian influenza.
出处 《热带医学杂志》 CAS 2008年第8期765-768,共4页 Journal of Tropical Medicine
基金 国家自然科学基金(No.30600724) 广东省自然科学基金研究团队项目(No.06201946) 广州市科技计划项目(No.2006J1-C0141) 广州市医学科学技术研究重点项目(No.2006-ZDi-10)
关键词 禽流感病毒 H5N1 血凝素 序列测定 系统发生分析 avian influenza virus H5N 1 hemagglutinin sequencing phylogentic analysis
  • 相关文献

参考文献12

  • 1Monto AS. The threat of an avian influenza pandemic [J]. New Engl J Med, 2005,352(4):323-325.
  • 2Olsen B, Munster V J, Wallensten A, et al. Global patterns of influenza a virus in wild birds[J]. Science,2006,312(5772) : 384-388.
  • 3Guan Y, Peiris JS, Lipatov AS, et al. Emergence of multiple genotypes of HSN1 avian influenza viruses in Hong Kong SAR [J].Proc Natl Acad Sci USA, 2002,99(13):8950-8955.
  • 4WHO. H5N1 avian influenza timeline, http://www.who.int/ csr/disease/avian influenza/en/.
  • 5Wang M, Di B, Zhou DH, et al. Food markets with live birds as source of avian influenza [J]. Emerg Infect Dis, 2006, 12( 11 ): 1773-1775.
  • 6王玉林,秦鹏哲,刘于飞,吴新伟,柳洋,范建文,湛柳华,郭钜旋,陈小霜,蒋立云,周端华,狄飚,王鸣.广州市2006年禽流感患者未造成密切接触者传播的调查[J].中华流行病学杂志,2006,27(11):953-955. 被引量:16
  • 7舒跃龙,蓝雨,温乐英,赵新生,张烨,董婕,段淑敏,聂凯,张晓光,王大燕,姚丽红,郭元吉.我国分离人H5N1禽流感病毒血凝素基因特性的研究[J].中华实验和临床病毒学杂志,2006,20(2):8-10. 被引量:6
  • 8Puthavathana P, Auewarakul P, Charoenying PC, et al. Molecular characterization of the complete genome of human influenza H5N1 virus isolates from Thailand[J]. J Gen Virol, 2005,86(Pt 2) : 423-433.
  • 9Lee CW, Suarez DL, Tumpey TM, et al. Characterization of highly pathogenic H5N1 avian influenza A viruses isolated from South Korea[ J ]. J Virol, 2005,79 (6):3692-3702.
  • 10张春兰,王建荣,胡慧建,彭波涌,胡军华,高永杰.2004年下半年广东野生鸟类禽流感研究初报[J].四川动物,2007,26(1):155-156. 被引量:5

二级参考文献21

共引文献47

同被引文献21

  • 1陈伯伦,张泽纪,陈伟斌.禽流感研究I.鸡A型禽流感病毒的分离与血清学初步鉴定[J].中国兽医杂志,1994,20(10):3-5. 被引量:241
  • 2Hoffmann E, Stech J, Guan Y,et al. Universal primer set for the full-length amplification of all influenza A viruses[J].Arch Virol, 2001,146(12) :2275-2289.
  • 3Guo Y J, Krauss S, Senne D A, et al. Characterization of the pathogenicity of members of the newly established H9N2 influenza virus lineages in Asia[J]. Virology, 2000,267 (2) : 279- 288.
  • 4Kawaoka Y, Webster R G. Sequence requirement for cleavage activation of influenza virus hemagglutinin expressed in mammalian cells[J]. Proc Nat Acad Sci USA, 1988,85(2):324-328.
  • 5Lin Y P, Shaw M, Gergory V, et al. Avian-to-human transmission of H9N2 subtype influenza A viruses: relationship between HgN2 and H5N1 human isotates[J]. Proc Natl Aead Sci USA, 2000,97(17) :9654-9658.
  • 6Spaekman E. A brief introduction to the avian influenza virus [J]. Methods Mol Biol,2008,436 : 1-6.
  • 7Fouchier R A, Munster V,Wallensten A,et al. Characterization of a novel influenza A virus hemagglutinin subtype(H16) obtained from black-headed gulls[J3. J Virol, 2005,79 (5) : 2814- 2822.
  • 8Webster R G,Bean W J,Gorman O T,et al. Evolution and ecology of influenza A viruses [J]. Microbiot Rev, 1992, 56 (1): 152-179.
  • 9Chen R, Holmes E. Frequent interspecies transmission and geographic subdivision in avian influenza viruses from wild birds [J]. Virology,2009,383(1) :156-161.
  • 10Chin P S, Hoffmanne,Webby R, et al. Molecular evolution of H6 influenza viruses from poultry in Southeastern China: prevalence of H6N1 influenza viruses possessing seven A/Hong Kong/156/97(H5N1)-like genes in poultry [J]. J Virol, 2002, 76(2) :507-516.

引证文献2

二级引证文献9

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部