期刊文献+

一种肿瘤基因表达数据的知识提取方法 被引量:13

A Method for Extracting Knowledge from Tumor Gene Expression Data
在线阅读 下载PDF
导出
摘要 本文以多发性骨髓瘤的基因表达数据为例 ,利用数据挖掘技术 ,提出了一种针对基因表达数据进行知识发现的方法 .该方法通过计算基因的信息增益 ,结合神经网络 ,找出了特征基因集合 ,最后利用决策树进行特征规则的提取 ,给出了基于多发性骨髓瘤数据样本的产生式规则 ,为生物医学研究提供了一种分析和研究基因表达数据的参考方法 .实验结果表明了该方法的有效性 . Based on the gene expression profiles of multiple myeloma,a method was proposed for knowledge discovery using data mining and machine learning methods.We used the information gain as the criterion of each gene for classification,and got a set of informative genes using artificial neural networks.Identified by decision tree algorithm,production rules were discovered as references for biomedical researchers.The effectiveness of the method we proposed is proved by experimental results.The method can also be used as a tool for gene expression analysis in the research of biomedicine and biotechnology.
出处 《电子学报》 EI CAS CSCD 北大核心 2004年第9期1479-1482,共4页 Acta Electronica Sinica
基金 国家自然科学基金重点资助项目 (No .60 2 340 2 0 )
关键词 DNA芯片 基因表达 数据挖掘 神经网络 多发性骨髓瘤 DNA chip gene expression data mining neural networks multiple myeloma
  • 相关文献

参考文献15

  • 1[1]Ramaswamy S,Golub T R.DNA Microarrays in clinical oncology[J].Journal of Clinical Oncology,2002,20(7):1932-1941.
  • 2[2]Lander E S,Weinberg R A.GENOMICS:Journey to the center of biology[J].Science,2000,287(5459):1777-1782.
  • 3[3]Lander E S.Array of hope[J].Nature Genetics,1999,21(suppl l):3-4.
  • 4[4]Golub T R,et al.Molecular classification of cancer:Class discovery and class prediction by gene expression monitoring[J].Science,1999,286(5439):531-537.
  • 5[5]Khan J,et al.Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks[J].Nature,2001,7(6):673-679.
  • 6[6]Zhan F,et al.Global gene expression profiling of multiple myeloma,monoclonal gammopathy of undetermined significance and normal bonemarrow plasma cells[J].Blood,2002,99(5):1745-1757.
  • 7[7]Yeang C H,et al.Molecular classification of multiple tumor types[J].Bioinfomatics,2001,17(Suppl 1):S316-S322.
  • 8[8]AliZadeh A A,et al.Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling[J].Nature,2000,403(6769):503-511.
  • 9[9]DeRisi J,et al.Use of a cDNA mircoarray to analyse gene expression patterns in human cancer[J].Nature Genet,1996,14(4):457-460.
  • 10[10]Hamadeh H K,et al.Prediction of compound signature using high density gene expression profiling[J].Toxicological Science,2002,67(2):232-240.

共引文献1

同被引文献189

引证文献13

二级引证文献42

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部