Agronomically optimizing the timing and rates of nitrogen(N) fertilizer application can increase crop yield and decrease N loss to the environment. Wheat(Triticum aestivum L.)–peanut(Arachis hypogaea L.) relay interc...Agronomically optimizing the timing and rates of nitrogen(N) fertilizer application can increase crop yield and decrease N loss to the environment. Wheat(Triticum aestivum L.)–peanut(Arachis hypogaea L.) relay intercropping systems are a mainstay of economic and food security in China. We performed a field experiment to investigate the effects of N fertilizer on N recovery efficiency, crop yield, and N loss rate in wheat–peanut relay intercropping systems in the Huang-Huai-Hai Plain, China during 2015–2017. The N was applied on the day before sowing, the jointing stage(G30) or the booting stage(G40) of winter wheat, and the anthesis stage(R1) of peanut in the following percentage splits: 50-50-0-0(N1), 35-35-0-30(N2), and 35-0-35-30(N3), using 300 kg N ha-1, with 0 kg N ha-1(N0) as control. ^(15)N-labeled(20.14 atom %) urea was used to trace the fate of N in microplots. The yields of wheat and peanut increased by 12.4% and 15.4% under the N2 and N3 treatments, relative to those under the N1 treatment. The ^(15)N recovery efficiencies( ^(15)NRE) were 64.9% and 58.1% for treatments N2 and N3, significantly greater than that for the N1 treatment(45.3%). The potential N loss rates for the treatments N2 and N3 were23.7% and 7.0%, significantly lower than that for treatment N1(30.1%). Withholding N supply until the booting stage(N3) did not reduce the wheat grain yield; however, it increased the N content derived from ^(15)N-labeled urea in peanuts, promoted the distribution of ^(15)N to pods, and ultimately increased pod yields in comparison with those obtained by topdressing N at jointing stage(N2). In comparison with N2, the N uptake and N recovery efficiency(NRE) of N3 was increased by 12.0% and 24.1%,respectively, while the apparent N loss decreased by 16.7%. In conclusion, applying N fertilizer with three splits and delaying topdressing fertilization until G40 of winter wheat increased total grain yields and NRE and reduced N loss. This practice could be an environment-friendly N management strategy for wheat–peanut relay intercropping systems in China.展开更多
Intercropping is used widely by smallholder farmers in developing countries to increase land productivity and profitability. We conducted a maize/peanut intercropping experiment in the 2015 and 2016 growing seasons in...Intercropping is used widely by smallholder farmers in developing countries to increase land productivity and profitability. We conducted a maize/peanut intercropping experiment in the 2015 and 2016 growing seasons in Shandong, China. Treatments included sole maize (SM), sole peanut (SP), and an intercrop consisting of four rows of maize and six rows of peanut (IM and IP). The results showed that the intercropping system had yield advantages based on the land equivalent ratio (LER) values of 1.15 and 1.16 in the two years, respectively. Averaged over the two years, the yield of maize in the intercropping was increased by 61.05% compared to that in SM, while the pod yield of peanut was decreased by 31.80% compared to SP. Maize was the superior competitor when intercropped with peanut, and its productivity dominated the yield of the intercropping system in our study. The increased yield was due to a higher kernel number per ear (KNE). Intercropping increased the light transmission ratio (LTR) of the ear layer in the maize canopy, the active photosynthetic duration (APD), and the harvest index (HI) compared to SM. In addition, intercropping promoted the ratio of dry matter accumulation after silking and the distribution of 13C-photosynthates to grain compared to SM. In conclusion, maize/peanut intercropping demonstrated the potential to improve the light condition of maize, achieving enhanced photosynthetic characteristics that improved female spike differentiation, reduced barrenness, and increased KNE. Moreover, dry matter accumulation and 13C-photosynthates distribution to grain of intercropped maize were improved, and a higher grain yield was ultimately obtained.展开更多
This study investigated the effects of six crop rotation combinations on the soil quality of old apple orchard and seedling growth of Malus hupehensis Rehd.(apple rootstock)under pot conditions.The inhibitory effects ...This study investigated the effects of six crop rotation combinations on the soil quality of old apple orchard and seedling growth of Malus hupehensis Rehd.(apple rootstock)under pot conditions.The inhibitory effects of crops such as Allium fistulosum,Brassica juncea,and Triticum aestivum on four species of Fusarium were observed and compared in six treatments.These were continuous cropping(CK),fumigation with the methyl bromide(FM),rotating A.fistulosum only(R1),rotating A.fistulosum and T.aestivum(R2),rotating A.fistulosum,B.juncea,and T.aestivum(R3),and fallow(FC)in a year.The results showed that the biomass of Malus hupehensis Rehd.seedlings increased significantly.The root length increased and the root architecture was optimized.The respiration rate of the root system was increased by about 1 time after rotation.The treatments of R1,R2,R3,and FC increased bacterial count by 232.17%,96.04%,316.21%,and 60.02%,respectively.However,the fungi were reduced in varying degrees and bacteria/fungi ratio was increased by 5–10 times.The enzyme activities,p H,and organic matter were increased,but soil bulk density was decreased.Phenolic acids such as phloridzin was decreased significantly.The copy number of four Fusarium species declined by 85.59%,74.94%,69.68%,and 54.41%after rotating three different crops(R3 treatment).The root volatiles of three plants inhibited mycelial growth and spore germination of four Fusarium species.展开更多
The components and contents of high-molecular-weight glutenin subunits(HMW-GS) in wheat grains affect glutenin macropolymer(GMP) size, which is considered an important flour quality trait in wheat. Four wheat cultivar...The components and contents of high-molecular-weight glutenin subunits(HMW-GS) in wheat grains affect glutenin macropolymer(GMP) size, which is considered an important flour quality trait in wheat. Four wheat cultivars(Shiluan 02-1, Yannong 24, Jinan 17 and Lumai 21) with different end-use qualities were used to investigate the HMW-GS and GMP contents, and the GMP particle distributions in grain produced under irrigated and rainfed conditions. The percent volume of GMP particles and the contents of HMW-GS and GMP were affected by genotype and soil water. Genotype × soil water interaction was significant only for GMP particles <12 μm and >100 μm in the growing season of 2010–2011. Irrigated and rainfed conditions had different influences on the GMP particle distribution in the four cultivars. Compared to irrigated treatment, the rainfed treatment had higher accumulations of HMW-GS and GMP, especially in cultivars Yannong 24, Jinan 17 and Lumai 21. Rainfed conditions also increased the proportion of large size particles of GMP, indicating that different water regimes had an effect on grain quality. According to correlation coefficients(r), the contents of HMW-GS and GMP in grains were negatively correlated with the volume of <12 μm GMP particles, but positively correlated with GMP particles >100 μm.展开更多
Shuguang （Prunus persica var. nectariana cv. Shuguang） nectarine was used to study effects of photoperiod on key-enzyme activities of respiration during dormancy induction. The dormancy status was determined with sp...Shuguang （Prunus persica var. nectariana cv. Shuguang） nectarine was used to study effects of photoperiod on key-enzyme activities of respiration during dormancy induction. The dormancy status was determined with sprouting ability. Spectrophotometry was used to investigate activities of phosphohexose isomerase （PGI）, malic dehydrogenase （MDH）, and glucose-6-phosphate dehydrogenase （G6PDH）. The results revealed that short day （SD） treatment promoted dormancy induction while long day （LD） treatment postponed the process. During dormancy induction, PGI activities declined, MDH activities changed little, and G6PDH activities increased both in flower buds and leaf buds. PGI activities and MDH activities in SD treatment were lower than control, and G6PDH activities were higher, which was opposite with LD treatment. The changes of respiratory key-enzyme activities were adjusted by photoperiod and correlated with the development of dormancy induction.展开更多
Intercropping and residue retention contribute to high yield and quality of crops. However, their coupled effects on rhizospheric microbial communities under a continuous vegetable cropping system have not been adequa...Intercropping and residue retention contribute to high yield and quality of crops. However, their coupled effects on rhizospheric microbial communities under a continuous vegetable cropping system have not been adequately addressed. The objective of the present study was to assess the effects on soil microbial community and yields of waxy maize（Zea mays L.） intercropped with or without residue retention in a continuous broccoli（Brassica oleracea L.） cropping system, i.e., relay intercropping of broccoli and waxy maize（B/M-B）, relay intercropping of broccoli and waxy maize with residue retention（B/MR-B）, and broccoli monoculture（B-B）. The biomass yields of spring and autumn vegetables in B/MR-B were 16.3%–32.5% and 30.1%–46.1% higher than those of B-B,respectively. Autumn vegetable economic yields of B/MR-B were 28.2%–40.3% higher than B-B. The average well color development followed the order： B/MR-B ＆gt; B/M-B ＆gt; B-B. The Shannon index, Simpson index, and Mc Intosh index were higher in B/MR-B than under monoculture. A principal component analysis showed that microbial communities of B/MR-B soils differed from those of B/M-B and B-B soils. Carbon（C） sources utilized by the rhizosphere microorganisms were mainly carbohydrates, carboxylic acids, amino acids, and polymers; however, the C sources for the soil microbial community differed between intercropping and monoculture. The communities from B/MR-B preferred amino acids and polymers. Available nitrogen（N）, potassium（K）, and phosphorus（P） had an obvious impact on soil microbial community. Additionally, the C source utilization by microorganisms was significantly affected by p H and available K and P. Cropping system diversification through relay intercropping and residue retention effectively improved the functional diversity of the soil microbial communities and increased the yields of vegetables.展开更多
Prunus species include many important perennial fruit crops,such as peach,plum,apricot,and related wild species.Here,we report de novo genome assemblies for five species,including the cultivated species peach(Prunus p...Prunus species include many important perennial fruit crops,such as peach,plum,apricot,and related wild species.Here,we report de novo genome assemblies for five species,including the cultivated species peach(Prunus persica),plum(Prunus salicina),and apricot(Prunus armeniaca),and the wild peach species Tibetan peach(Prunus mira)and Chinese wild peach(Prunus davidiana).The genomes ranged from 240 to 276 Mb in size,with contig N50 values of 2.27−8.30Mb and 25,333−27,826 protein-coding gene models.As the phylogenetic tree shows,plum diverged from its common ancestor with peach,wild peach species,and apricot~7 million years ago(MYA).We analyzed whole-genome resequencing data of 417 peach accessions,called 3,749,618 high-quality SNPs,577,154 small indels,31,800 deletions,duplications,and inversions,and 32,338 insertions,and performed a structural variant-based genome-wide association study(GWAS)of key agricultural traits.From our GWAS data,we identified a locus associated with a fruit shape corresponding to the OVATE transcription factor,where a large inversion event correlates with higher OVATE expression in flat-shaped accessions.Furthermore,a GWAS revealed a NAC transcription factor associated with fruit developmental timing that is linked to a tandem repeat variant and elevated NAC expression in early-ripening accessions.We also identified a locus encoding microRNA172d,where insertion of a transposable element into its promoter was found in double-flower accessions.Thus,our efforts have suggested roles for OVATE,a NAC transcription factor,and microRNA172d in fruit shape,fruit development period,and floral morphology,respectively,that can be connected to traits in other crops,thereby demonstrating the importance of parallel evolution in the diversification of several commercially important domesticated species.In general,these genomic resources will facilitate functional genomics,evolutionary research,and agronomic improvement of these five and other Prunus species.We believe that structural variant-based GWASs can also be used in other plants,animal species,and humans and be combined with deep sequencing GWASs to precisely identify candidate genes and genetic architecture components.展开更多
Photosynthesis, the most important physiological process in plants, can produce not only ATP and NADPH used in other processes but also carbohydrate, the key factor for crop yield. Production of photoassimilates is of...Photosynthesis, the most important physiological process in plants, can produce not only ATP and NADPH used in other processes but also carbohydrate, the key factor for crop yield. Production of photoassimilates is often influenced by various environmental factors such as light, temperature, CO2, water, mineral elements and leaf stage and position. Here we focused on the light-mediated regulation of photoassimilate translocation in plants and the application of light environment control in greenhouse production. We also reviewed the effects of other factors including leaf age and position, air temperature, CO2 concentration and water and mineral element supply on photoassimilate translocation in plants. Finally some perspectives have been proposed.展开更多
Chilling stress and continuous cropping obstacles limit sustainable production of watermelons under controlled environments.Grafting of watermelon scions onto resistant rootstocks is an effective strategy currently us...Chilling stress and continuous cropping obstacles limit sustainable production of watermelons under controlled environments.Grafting of watermelon scions onto resistant rootstocks is an effective strategy currently used to overcome these environment limitations.However,currently used commercial rootstocks adversely affect watermelon fruit quality.The chilling tolerance and Fusarium oxysporum f.sp.niveum race 1(FON1)resistance of seven Cucurbit germplasms,including four watermelon germplasms(M08,TC,YL,and MY),two muskmelon cultivars(JT1 and JSM),and one commercial Cucurbita rootstock(QZ1)of watermelon,were explored in the current study.The effects of the rootstocks of these germplasms on watermelon resistance to chilling stress and continuous cropping obstacles were evaluated.TC rootstock showed the highest chilling tolerance and increased chilling tolerance of watermelon scion.All Cucurbit germplasms showed higher resistance to FON1 than watermelon cultivar N5(control).Watermelons grafted onto QZ1 showed the lowest wilt incidence and highest fruit yield but had the worst fruit quality after planting on soils continuously cropped for 11 years.Watermelons grafted onto TC showed higher resistance and yield and the best fruit quality.These findings indicate that TC has a large potential for use in grafting watermelon planted in continuously cropped soils(<10 years).TC can also be used as breeding rootstocks to improve watermelon resistance against continuous cropping obstacles without compromising fruit quality.展开更多
The footprints of water and nitrogen(WF and NF)provide a comprehensive overview of the type and quantity of water consumption and reactive nitrogen(Nr)loss in crop production.In this study,a field experiment over two ...The footprints of water and nitrogen(WF and NF)provide a comprehensive overview of the type and quantity of water consumption and reactive nitrogen(Nr)loss in crop production.In this study,a field experiment over two years(2019 and 2020)compared three integrated agronomic practice management(IAPM)systems:An improved management system(T2),a high-yield production system(T3),and an integrated soil-crop management system(ISCM)using a local smallholder farmer’s practice system(T1)as control,to investigate the responses of WF,Nr losses,water use efficiency(WUE),and nitrogen use efficiency(NUE)to IAPM.The results showed that IAPM optimized water distribution and promoted water use by summer maize.The evapotranspiration over the whole maize growth period of IAPM increased,but yield increased more,leading to a significant increase in WUE.The WUE of the T2,T3,and ISCM treatments was significantly greater than in the T1 treatment,in 2019 and 2020respectively,by 19.8-21.5,31.8-40.6,and 34.4-44.6%.The lowest WF was found in the ISCM treatment,which was 31.0%lower than that of the T1 treatment.In addition,the ISCM treatment optimized soil total nitrogen(TN)distribution and significantly increased TN in the cultivated layer.Excessive nitrogen fertilizer was applied in treatment T3,producing the highest maize yield,and resulting in the highest Nr losses.In contrast,the ISCM treatment used a reduced nitrogen fertilizer rate,sacrificing grain yield partly,which reduced Nr losses and eventually led to a significant increase in nitrogen use efficiency and nitrogen recovery.The Nr level in the ISCM treatment was34.8%lower than in the T1 treatment while NUE was significantly higher than in the T1 treatment by 56.8-63.1%in2019 and 2020,respectively.Considering yield,WUE,NUE,WF,and NF together,ISCM should be used as a more sustainable and clean system for sustainable production of summer maize.展开更多
Pear(Pyrus bretschneideri)fruit stone cells are primarily composed of lignin and have strongly lignified cell walls.The presence of stone cells has a negative influence on fruit texture and taste,and thus the reductio...Pear(Pyrus bretschneideri)fruit stone cells are primarily composed of lignin and have strongly lignified cell walls.The presence of stone cells has a negative influence on fruit texture and taste,and thus the reduction of stone cell content in pear fruit is a key goal of breeding efforts.However,research into the key transcription factors and regulatory networks associated with pear fruit stone cell formation have been limited.We here used a combination of co-expression network and expression quantitative trait locus(eQTL)analyses in 206 pear cultivars with different stone cell contents to identify relevant genes;these analyses uncovered the gene PbrMYB4,a R2R3 MYB transcription factor gene.There was a strong positive correlation between relative PbrMYB4 expression levels in the fruit flesh and stone cell/lignin contents.Overexpression of PbrMYB4 significantly increased the lignin contents,whereas silencing of PbrMYB4 had the opposite effect,decreasing the contents of lignin.PbrMYB4 overexpression in pear calli significantly promoted lignin biosynthesis.In Arabidopsis thaliana,PbrMYB4 overexpression resulted in increasing lignin deposition,cell wall thickness of vessels and xylary fiber,and accelerating expression level of lignin biosynthetic genes.PbrMYB4 was found to activate 4-Coumarate:Coenzyme A Ligase(Pbr4CL1)by binding to AC-I elements in the promoter regions,as demonstrated with dual-luciferase reporter assays and a yeast one-hybrid assay.These results demonstrated that PbrMYB4 positively regulated lignin biosynthesis in pear fruit stone cells by activating lignin biosynthesis genes.This study improves our understanding of the gene regulatory networks associated with stone cell formation in pear fruit,providing guidance for molecular breeding of pear varieties with low stone cell content.展开更多
Reductive soil disinfestation(RSD)is commonly employed for soil remediation in greenhouse cultivation.However,its influence on antibiotic resistance genes(ARGs)in soil remains uncertain.This study investigated the dyn...Reductive soil disinfestation(RSD)is commonly employed for soil remediation in greenhouse cultivation.However,its influence on antibiotic resistance genes(ARGs)in soil remains uncertain.This study investigated the dynamic changes in soil communities,potential bacterial pathogens,and ARG profiles under various organicmaterial treatments during RSD,including distillers’grains,potato peel,peanut vine,and peanut vine combined with charcoal.Results revealed that applying diverse organic materials in RSD significantly altered bacterial community composition and diminished the relative abundance of potential bacterial pathogens(P<0.05).The relative abundance of high-risk ARGs decreased by 10.7%-30.6%after RSD treatments,the main decreased ARG subtypeswere AAC(3)_Via,dfrA1,ErmB,lnuB,aadA.Actinobacteria was the primary host of ARGs and was suppressed by RSD.Soil physicochemical properties,such as total nitrogen,soil pH,total carbon,were crucial factors affecting ARG profiles.Our findings demonstrated that RSD treatment inhibited pathogenic bacteria and could be an option for reducing high-risk ARG proliferation in soil.展开更多
Resveratrol is an important secondary metabolite not only owing to its function as a phytoalexin,but also its potential benefits to human health.In this study,the content of trans-resveratrol was documented in seven a...Resveratrol is an important secondary metabolite not only owing to its function as a phytoalexin,but also its potential benefits to human health.In this study,the content of trans-resveratrol was documented in seven accessions of grapevine,in the seed,pulp and skin of berries,and at three developmental stages.The highest amount(2.99μg g^(−1) FW)was found in the skin of berries at the ripe stage from V.amurensis‘Tonghua-3'.Resveratrol was not detected in several samples,including skin of berries at the green hard or véraison stage from V.davidii‘Tangwei'.We carried out transcriptional profiling of developing‘Tonghua-3'and‘Tangwei'berries to identify gene expression patterns that may be linked with the difference in resveratrol content between these accessions.The expression levels of several differentially expressed genes(DEGs)with presumed function in resveratrol biosynthesis,including STILBENE SYNTHASEs(STSs),CINNAMATE 4-HYDROXYLASEs(C4Hs)and 4-COUMARATE-COA LIGASEs(4CLs),were significantly higher in‘Tonghua-3',than in'Tangwei'during the véraison and ripe stages.Gene ontology and Kyoto Encyclopedia of Genes and Genomes analyses suggested that these DEGs were enriched for multiple biological processes at the three stages of fruit development.Additionally,we identified a total of 36 transcription factors,including MYBs,WRKYs,ERFs,bHLHs and bZIPs,that were coexpressed with 17 STSs via a weighted gene co-expression network analysis,suggesting roles as regulators of resveratrol biosynthesis.Overall,these findings provide insight into genotypic differences in resveratrol biosynthesis in grapevine,as well as the molecular genetics of its regulation.展开更多
Wheat stripe rust, caused by Puccinia striiformis f. sp. tritici(Pst), is an airborne disease. In China, it frequently develops initially in central Shaanxi and southwestern Gansu, and from there, inoculum spreads to ...Wheat stripe rust, caused by Puccinia striiformis f. sp. tritici(Pst), is an airborne disease. In China, it frequently develops initially in central Shaanxi and southwestern Gansu, and from there, inoculum spreads to the eastern wheat production regions. Field investigations have suggested that Pst could spread from the west to the east within central Shaanxi andthat Gansu could serve as the inoculum source for central Shaanxi, but there is no direct evidence for this hypothetical dispersal route. In the current study, 321 Pst isolates collected from central Shaanxi and Gansu in the 2019–2020 and2020–2021 winter wheat cropping seasons were genotyped using 23 pairs of KASP-SNP markers. The dispersion among subpopulations was analyzed using several approaches, and overall, the populations were found to exhibit high levels of genetic diversity. There was little genetic divergence(0.05>FST>0) within central Shaanxi. However, significant gene flow(Nm>4) driven by wind-oriented dispersal from west(Baoji) to east(Weinan) occurred. There was also gene flow among the 4 Gansu subpopulations of Tianshui, Longnan, Pingliang, and Qingyang. Migration of the pathogen occurred between central Shaanxi and Gansu. Migration from Gansu to central Shaanxi was major compared with that from central Shaanxi to Gansu that was minor. Genetic variation occurred among isolates, instead of among subpopulations and within isolates. Linkage disequilibrium revealed that there was strong genetic recombination in the subpopulations from Gansu and central Shaanxi. Therefore, the present study provides molecular evidence that Pst spread from west to east in central Shaanxi and showed that Gansu(especially Longnan and Tianshui) was one of the major origins of the pathogen inoculum of wheat stripe rust in central Shaanxi. The results revealed the west-to-east transmission route of wheat stripe rust in central Shaanxi, being used to guide integrated management of the disease.展开更多
Herbicide safeners alleviate herbicide toxicity while preserving weed-control efficacy in common buckwheat.A three-year field experiment was performed to measure the effects of quizalofop-P-ethyl(QPE)alone or in combi...Herbicide safeners alleviate herbicide toxicity while preserving weed-control efficacy in common buckwheat.A three-year field experiment was performed to measure the effects of quizalofop-P-ethyl(QPE)alone or in combination with gibberellin or brassinolide on soil enzyme activity and yield components in common buckwheat.The herbicide-brassinolide application yielded the greatest increases in soil enzyme activity and yield components without sacrificing weed control efficacy.It is recommended for use in common buckwheat cultivation in the Loess Plateau.展开更多
Improving protein quality and grain yield traits coordinately is an important goal for crop breeding.To date,many protein-quality or grain-yield regulation genes have been identified.However,the genetic strategies int...Improving protein quality and grain yield traits coordinately is an important goal for crop breeding.To date,many protein-quality or grain-yield regulation genes have been identified.However,the genetic strategies integrating these genes in good-protein-quality and high-yield crop breeding practice are far from established.Here,we characterized the functions of the MADS domain-containing protein Zm MADS8 and Zea mays G protein gamma subunit 1(Zm GG1)in regulating protein quality and grain yield of maize.Zm MADS8 positively regulates zein protein accumulation and negatively regulates nonzein protein and lysine levels in kernels by interacting with Zm MADS47 to promote the transcriptional activation of Opaque2.Additionally,Zm MADS8 regulates starch content of kernels by targeting genes involved in starch biosynthesis.Zm GG1,a putative interactor of Zm MADS8,negatively regulates kernel number with a trade-off effect on kernel starch accumulation.The mads8;zmgg1 double mutant improved protein quality by attenuating zein biosynthesis and increasing essential lysine level,and increased grain yield by increasing kernel number,compensating for decreased starch biosynthesis.Our findings revealed the biological function of Zm MADS8 and Zm GG1 in regulating protein quality and yield related traits and suggested a genetic strategy by direct editing of Zm MADS8 and Zm GG1 to improve grain yield and protein quality simultaneously.展开更多
Nitrogen fertilizer is an important agronomic measure significantly affecting crop yield and grain quality.This twoyear study aimed to explore the effects of four nitrogen levels on the morphology,lamellar and crystal...Nitrogen fertilizer is an important agronomic measure significantly affecting crop yield and grain quality.This twoyear study aimed to explore the effects of four nitrogen levels on the morphology,lamellar and crystalline structure,pasting,and rheological properties of proso millet(PM)starch and to investigate potential food applications of PM.The results showed that the starch surface became uneven,and the structure of the starch granules shifted towards greater complexity with increasing nitrogen levels.Nitrogen increased the relative crystallinity,ordered structure,and average repeat distance,leading to a stable starch structure and a higher gelatinization enthalpy.Furthermore,nitrogen significantly increased peak,breakdown,setback,and final viscosities but decreased apparent amylose content,which caused the shear resistance and storage capacity of PM starch-based foods to deteriorate during processing and transport.Rheological analysis showed that PM starch exhibited the typical characteristics of a pseudoplastic fluid.Under nitrogen treatment,PM starch gels showed high potential for application in 3D printing products due to high resistance to shear thinning,gel strength,and yield stress,presumably owing to the significantly higher G′than G′′,and the lower amylose content,which in turn promoted the formation of a stable network structure in water to immobilize more water.Our study provides a reference for applying PM starch in the food industry and for developing PM cropping-management programs to improve quality.展开更多
Tomato(Solanum lycopersicum)is an extensively cultivated vegetable,and its growth and fruit quality can be significantly impaired by low temperatures.The widespread presence of N^(6)-methyladenosine(m^(6)A)modificatio...Tomato(Solanum lycopersicum)is an extensively cultivated vegetable,and its growth and fruit quality can be significantly impaired by low temperatures.The widespread presence of N^(6)-methyladenosine(m^(6)A)modification on RNA is involved in a diverse range of stress response processes.There is a significant knowledge gap regarding the precise roles of m^(6)A modification in tomato,particularly for cold stress response.Here,we assessed the m^(6)A modification landscape of S.lycopersicum'Micro-Tom'leaves in response to low-temperature stress.Furthermore,we investigated the potential relationship among m^(6)A modification,transcriptional regulation,alternative polyadenylation events,and protein translation via MeRIP-seq,RNA-seq,and protein mass spectrometry.After omic date analysis,11378 and 10735 significant m^(6)A peak associated genes were identified in the control and cold treatment tomato leaves,respectively.Additionally,we observed a UGUACAK(K=G/U)motif under both conditions.Differential m^(6)A site associated genes most likely play roles in protein translation regulatory pathway.Besides directly altering gene expression levels,m^(6)A also leads to differential poly(A)site usage under low-temperature.Finally,24 important candidate genes associated with cold stress were identified by system-level multi-omic analysis.Among them,m^(6)A modification levels were increased in SBPase(Sedoheptulose-1,7-bisphosphatase,Solyc05g052600.4)mRNA,causing distal poly(A)site usage,downregulation of mRNA expression level,and increased protein abundance.Through these,tomato leaves try to maintain normal photo synthetic carbon assimilation and nitro gen metabolism under low-temperature condition.The comprehensive investigation of the m^(6)A modification landscape and multi-omics analysis provide valuable insights into the epigenetic regulatory mechanisms in tomato cold stress response.展开更多
Photosynthesis is the basis of crop growth and is sensitive to stress.Smut(Sporisorium destruens)is the primary disease in the production of broomcorn millet(Panicum miliaceum L.).This study evaluated the effects of i...Photosynthesis is the basis of crop growth and is sensitive to stress.Smut(Sporisorium destruens)is the primary disease in the production of broomcorn millet(Panicum miliaceum L.).This study evaluated the effects of infection with S.destruens on the photosynthesis of the resistant cultivar(BM)and susceptible cultivar(NF).After inoculation,there was a decrease in the chlorophyll content,gas exchange parameters,and chlorophyll fluorescence of the two cultivars.Observation of the ultrastructure of diseased leaves showed that the chloroplasts and mitochondria had abnormal morphology,and some vacuoles appeared.RNA-seq was performed on the flag leaves after inoculation.In addition to the resistant and susceptible cultivars,the diseased leaves developed from inflorescences were defined as S2.The analysis showed that the pathways related to photosynthesis stimulated some differentially expressed genes(DEGs)after infection with S.destruens.More DEGs were induced in the susceptible broomcorn millet NF than in the resistant broomcorn millet BM,and most of those genes were downregulated.The number of DEGs induced by S2 was greater than that in susceptible cultivar NF,and most of them were upregulated.These results indicate that infection with S.destruens affects the normal photosynthetic performance of broomcorn millet.Understanding the mechanism between S.destruens,photosynthesis,and broomcorn millet is an effective measure to prevent the occurrence of smut and enhance its resistance.展开更多
基金supported by the National Key Technology R&D Program of China (2014BAD11B04-2)the National Natural Science Foundation of China (30840056, 31171496)Shandong Modern Agricultural Technology and Industry System (SDAIT-04-01)
文摘Agronomically optimizing the timing and rates of nitrogen(N) fertilizer application can increase crop yield and decrease N loss to the environment. Wheat(Triticum aestivum L.)–peanut(Arachis hypogaea L.) relay intercropping systems are a mainstay of economic and food security in China. We performed a field experiment to investigate the effects of N fertilizer on N recovery efficiency, crop yield, and N loss rate in wheat–peanut relay intercropping systems in the Huang-Huai-Hai Plain, China during 2015–2017. The N was applied on the day before sowing, the jointing stage(G30) or the booting stage(G40) of winter wheat, and the anthesis stage(R1) of peanut in the following percentage splits: 50-50-0-0(N1), 35-35-0-30(N2), and 35-0-35-30(N3), using 300 kg N ha-1, with 0 kg N ha-1(N0) as control. ^(15)N-labeled(20.14 atom %) urea was used to trace the fate of N in microplots. The yields of wheat and peanut increased by 12.4% and 15.4% under the N2 and N3 treatments, relative to those under the N1 treatment. The ^(15)N recovery efficiencies( ^(15)NRE) were 64.9% and 58.1% for treatments N2 and N3, significantly greater than that for the N1 treatment(45.3%). The potential N loss rates for the treatments N2 and N3 were23.7% and 7.0%, significantly lower than that for treatment N1(30.1%). Withholding N supply until the booting stage(N3) did not reduce the wheat grain yield; however, it increased the N content derived from ^(15)N-labeled urea in peanuts, promoted the distribution of ^(15)N to pods, and ultimately increased pod yields in comparison with those obtained by topdressing N at jointing stage(N2). In comparison with N2, the N uptake and N recovery efficiency(NRE) of N3 was increased by 12.0% and 24.1%,respectively, while the apparent N loss decreased by 16.7%. In conclusion, applying N fertilizer with three splits and delaying topdressing fertilization until G40 of winter wheat increased total grain yields and NRE and reduced N loss. This practice could be an environment-friendly N management strategy for wheat–peanut relay intercropping systems in China.
基金support of the National Key Research and Development Program of China (2017YFD0301001)the National Natural Science Foundation of China (31301274 and 31171497)+1 种基金funds from the Shandong “Double Tops” Program, China (SYL2017XTTD14)the Open Project of State Key Laboratory of Crop Biology in Shandong Agricultural University, China (2018KF10)
文摘Intercropping is used widely by smallholder farmers in developing countries to increase land productivity and profitability. We conducted a maize/peanut intercropping experiment in the 2015 and 2016 growing seasons in Shandong, China. Treatments included sole maize (SM), sole peanut (SP), and an intercrop consisting of four rows of maize and six rows of peanut (IM and IP). The results showed that the intercropping system had yield advantages based on the land equivalent ratio (LER) values of 1.15 and 1.16 in the two years, respectively. Averaged over the two years, the yield of maize in the intercropping was increased by 61.05% compared to that in SM, while the pod yield of peanut was decreased by 31.80% compared to SP. Maize was the superior competitor when intercropped with peanut, and its productivity dominated the yield of the intercropping system in our study. The increased yield was due to a higher kernel number per ear (KNE). Intercropping increased the light transmission ratio (LTR) of the ear layer in the maize canopy, the active photosynthetic duration (APD), and the harvest index (HI) compared to SM. In addition, intercropping promoted the ratio of dry matter accumulation after silking and the distribution of 13C-photosynthates to grain compared to SM. In conclusion, maize/peanut intercropping demonstrated the potential to improve the light condition of maize, achieving enhanced photosynthetic characteristics that improved female spike differentiation, reduced barrenness, and increased KNE. Moreover, dry matter accumulation and 13C-photosynthates distribution to grain of intercropped maize were improved, and a higher grain yield was ultimately obtained.
基金supported by the National Natural Science Foundation of China(Grant No.31672104)China Agriculture Research System of MOF and MARA(Grant No.CARS-27)+4 种基金Shandong Agricultural Major Applied Technology Innovation Project(Grant No.SD2019ZZ008)Taishan Scholar Funded Project(Grant No.20190923)Qingchuang Science and Technology Support Project of Shandong Colleges and Universities(Grant No.2019KJF020)Natural Science Foundation of Shandong Province(Grant No.ZR2020MC131)the National Key Research and Development Program of China(Grant No.2020YFD1000201)。
文摘This study investigated the effects of six crop rotation combinations on the soil quality of old apple orchard and seedling growth of Malus hupehensis Rehd.(apple rootstock)under pot conditions.The inhibitory effects of crops such as Allium fistulosum,Brassica juncea,and Triticum aestivum on four species of Fusarium were observed and compared in six treatments.These were continuous cropping(CK),fumigation with the methyl bromide(FM),rotating A.fistulosum only(R1),rotating A.fistulosum and T.aestivum(R2),rotating A.fistulosum,B.juncea,and T.aestivum(R3),and fallow(FC)in a year.The results showed that the biomass of Malus hupehensis Rehd.seedlings increased significantly.The root length increased and the root architecture was optimized.The respiration rate of the root system was increased by about 1 time after rotation.The treatments of R1,R2,R3,and FC increased bacterial count by 232.17%,96.04%,316.21%,and 60.02%,respectively.However,the fungi were reduced in varying degrees and bacteria/fungi ratio was increased by 5–10 times.The enzyme activities,p H,and organic matter were increased,but soil bulk density was decreased.Phenolic acids such as phloridzin was decreased significantly.The copy number of four Fusarium species declined by 85.59%,74.94%,69.68%,and 54.41%after rotating three different crops(R3 treatment).The root volatiles of three plants inhibited mycelial growth and spore germination of four Fusarium species.
基金supported by the National Natural Science Foundation of China (Grant No. 31271667)the Natural Science Foundation of Shandong Province, China (Grant No. ZR2010CM044)+1 种基金the National Basic Research Program of China (973 Program, Grant No. 2009CB118602)State Key Laboratory of Crop Biology (Grant No. 2012KF01) of Shandong Agricultural University, Tai'an, Shandong, China
文摘The components and contents of high-molecular-weight glutenin subunits(HMW-GS) in wheat grains affect glutenin macropolymer(GMP) size, which is considered an important flour quality trait in wheat. Four wheat cultivars(Shiluan 02-1, Yannong 24, Jinan 17 and Lumai 21) with different end-use qualities were used to investigate the HMW-GS and GMP contents, and the GMP particle distributions in grain produced under irrigated and rainfed conditions. The percent volume of GMP particles and the contents of HMW-GS and GMP were affected by genotype and soil water. Genotype × soil water interaction was significant only for GMP particles <12 μm and >100 μm in the growing season of 2010–2011. Irrigated and rainfed conditions had different influences on the GMP particle distribution in the four cultivars. Compared to irrigated treatment, the rainfed treatment had higher accumulations of HMW-GS and GMP, especially in cultivars Yannong 24, Jinan 17 and Lumai 21. Rainfed conditions also increased the proportion of large size particles of GMP, indicating that different water regimes had an effect on grain quality. According to correlation coefficients(r), the contents of HMW-GS and GMP in grains were negatively correlated with the volume of <12 μm GMP particles, but positively correlated with GMP particles >100 μm.
基金supported by the National High-Tech R&D Program (863) of China (2005AA247041)the Key Projects in the National Science & Technology Pillar Program of China during the 11th Five-Year Plan period (2006BAD07B06)
文摘Shuguang （Prunus persica var. nectariana cv. Shuguang） nectarine was used to study effects of photoperiod on key-enzyme activities of respiration during dormancy induction. The dormancy status was determined with sprouting ability. Spectrophotometry was used to investigate activities of phosphohexose isomerase （PGI）, malic dehydrogenase （MDH）, and glucose-6-phosphate dehydrogenase （G6PDH）. The results revealed that short day （SD） treatment promoted dormancy induction while long day （LD） treatment postponed the process. During dormancy induction, PGI activities declined, MDH activities changed little, and G6PDH activities increased both in flower buds and leaf buds. PGI activities and MDH activities in SD treatment were lower than control, and G6PDH activities were higher, which was opposite with LD treatment. The changes of respiratory key-enzyme activities were adjusted by photoperiod and correlated with the development of dormancy induction.
基金financially supported by the Special Research Funding for Public Benefit Industries (Agriculture) of China (No. 201503121)the Key Projects in the National Science and Technology Pillar Program during the Twelfth Five-year Plan Period, China (No. 2012BAD14B07)
文摘Intercropping and residue retention contribute to high yield and quality of crops. However, their coupled effects on rhizospheric microbial communities under a continuous vegetable cropping system have not been adequately addressed. The objective of the present study was to assess the effects on soil microbial community and yields of waxy maize（Zea mays L.） intercropped with or without residue retention in a continuous broccoli（Brassica oleracea L.） cropping system, i.e., relay intercropping of broccoli and waxy maize（B/M-B）, relay intercropping of broccoli and waxy maize with residue retention（B/MR-B）, and broccoli monoculture（B-B）. The biomass yields of spring and autumn vegetables in B/MR-B were 16.3%–32.5% and 30.1%–46.1% higher than those of B-B,respectively. Autumn vegetable economic yields of B/MR-B were 28.2%–40.3% higher than B-B. The average well color development followed the order： B/MR-B ＆gt; B/M-B ＆gt; B-B. The Shannon index, Simpson index, and Mc Intosh index were higher in B/MR-B than under monoculture. A principal component analysis showed that microbial communities of B/MR-B soils differed from those of B/M-B and B-B soils. Carbon（C） sources utilized by the rhizosphere microorganisms were mainly carbohydrates, carboxylic acids, amino acids, and polymers; however, the C sources for the soil microbial community differed between intercropping and monoculture. The communities from B/MR-B preferred amino acids and polymers. Available nitrogen（N）, potassium（K）, and phosphorus（P） had an obvious impact on soil microbial community. Additionally, the C source utilization by microorganisms was significantly affected by p H and available K and P. Cropping system diversification through relay intercropping and residue retention effectively improved the functional diversity of the soil microbial communities and increased the yields of vegetables.
基金This work was supported byNational Key Research and Development Plan,grant No.2018YFD1000104National Natural Science Foundation of China,grant No.31872041+2 种基金Provincial Natural Science Foundation of Shandong,grant No.ZR2018MC023Shandong Province Agricultural Good Seed Project grant,No.2020LZGC007 and 2020LZGC00702Funding for major agricultural application technology innovation projects in Shandong Province.
文摘Prunus species include many important perennial fruit crops,such as peach,plum,apricot,and related wild species.Here,we report de novo genome assemblies for five species,including the cultivated species peach(Prunus persica),plum(Prunus salicina),and apricot(Prunus armeniaca),and the wild peach species Tibetan peach(Prunus mira)and Chinese wild peach(Prunus davidiana).The genomes ranged from 240 to 276 Mb in size,with contig N50 values of 2.27−8.30Mb and 25,333−27,826 protein-coding gene models.As the phylogenetic tree shows,plum diverged from its common ancestor with peach,wild peach species,and apricot~7 million years ago(MYA).We analyzed whole-genome resequencing data of 417 peach accessions,called 3,749,618 high-quality SNPs,577,154 small indels,31,800 deletions,duplications,and inversions,and 32,338 insertions,and performed a structural variant-based genome-wide association study(GWAS)of key agricultural traits.From our GWAS data,we identified a locus associated with a fruit shape corresponding to the OVATE transcription factor,where a large inversion event correlates with higher OVATE expression in flat-shaped accessions.Furthermore,a GWAS revealed a NAC transcription factor associated with fruit developmental timing that is linked to a tandem repeat variant and elevated NAC expression in early-ripening accessions.We also identified a locus encoding microRNA172d,where insertion of a transposable element into its promoter was found in double-flower accessions.Thus,our efforts have suggested roles for OVATE,a NAC transcription factor,and microRNA172d in fruit shape,fruit development period,and floral morphology,respectively,that can be connected to traits in other crops,thereby demonstrating the importance of parallel evolution in the diversification of several commercially important domesticated species.In general,these genomic resources will facilitate functional genomics,evolutionary research,and agronomic improvement of these five and other Prunus species.We believe that structural variant-based GWASs can also be used in other plants,animal species,and humans and be combined with deep sequencing GWASs to precisely identify candidate genes and genetic architecture components.
文摘Photosynthesis, the most important physiological process in plants, can produce not only ATP and NADPH used in other processes but also carbohydrate, the key factor for crop yield. Production of photoassimilates is often influenced by various environmental factors such as light, temperature, CO2, water, mineral elements and leaf stage and position. Here we focused on the light-mediated regulation of photoassimilate translocation in plants and the application of light environment control in greenhouse production. We also reviewed the effects of other factors including leaf age and position, air temperature, CO2 concentration and water and mineral element supply on photoassimilate translocation in plants. Finally some perspectives have been proposed.
基金supported by the National Key Research and Development Program of China (2018YFD1000800)the National Natural Science Foundation of China (31972479)+2 种基金the Earmarked Fund for China Agriculture Research System (CARS-25)the Science and Technology Innovation Team of Shaanxi (2021TD-32)the Tang Scholar of Northwest A&F University.
文摘Chilling stress and continuous cropping obstacles limit sustainable production of watermelons under controlled environments.Grafting of watermelon scions onto resistant rootstocks is an effective strategy currently used to overcome these environment limitations.However,currently used commercial rootstocks adversely affect watermelon fruit quality.The chilling tolerance and Fusarium oxysporum f.sp.niveum race 1(FON1)resistance of seven Cucurbit germplasms,including four watermelon germplasms(M08,TC,YL,and MY),two muskmelon cultivars(JT1 and JSM),and one commercial Cucurbita rootstock(QZ1)of watermelon,were explored in the current study.The effects of the rootstocks of these germplasms on watermelon resistance to chilling stress and continuous cropping obstacles were evaluated.TC rootstock showed the highest chilling tolerance and increased chilling tolerance of watermelon scion.All Cucurbit germplasms showed higher resistance to FON1 than watermelon cultivar N5(control).Watermelons grafted onto QZ1 showed the lowest wilt incidence and highest fruit yield but had the worst fruit quality after planting on soils continuously cropped for 11 years.Watermelons grafted onto TC showed higher resistance and yield and the best fruit quality.These findings indicate that TC has a large potential for use in grafting watermelon planted in continuously cropped soils(<10 years).TC can also be used as breeding rootstocks to improve watermelon resistance against continuous cropping obstacles without compromising fruit quality.
基金support of the National Key R&D Program of China(2023YFD2301500)the China Agriculture System of MOF and MARA(CARS-02)the Shandong Central Guiding the Local Science and Technology Development,China(YDZX20203700002548)。
文摘The footprints of water and nitrogen(WF and NF)provide a comprehensive overview of the type and quantity of water consumption and reactive nitrogen(Nr)loss in crop production.In this study,a field experiment over two years(2019 and 2020)compared three integrated agronomic practice management(IAPM)systems:An improved management system(T2),a high-yield production system(T3),and an integrated soil-crop management system(ISCM)using a local smallholder farmer’s practice system(T1)as control,to investigate the responses of WF,Nr losses,water use efficiency(WUE),and nitrogen use efficiency(NUE)to IAPM.The results showed that IAPM optimized water distribution and promoted water use by summer maize.The evapotranspiration over the whole maize growth period of IAPM increased,but yield increased more,leading to a significant increase in WUE.The WUE of the T2,T3,and ISCM treatments was significantly greater than in the T1 treatment,in 2019 and 2020respectively,by 19.8-21.5,31.8-40.6,and 34.4-44.6%.The lowest WF was found in the ISCM treatment,which was 31.0%lower than that of the T1 treatment.In addition,the ISCM treatment optimized soil total nitrogen(TN)distribution and significantly increased TN in the cultivated layer.Excessive nitrogen fertilizer was applied in treatment T3,producing the highest maize yield,and resulting in the highest Nr losses.In contrast,the ISCM treatment used a reduced nitrogen fertilizer rate,sacrificing grain yield partly,which reduced Nr losses and eventually led to a significant increase in nitrogen use efficiency and nitrogen recovery.The Nr level in the ISCM treatment was34.8%lower than in the T1 treatment while NUE was significantly higher than in the T1 treatment by 56.8-63.1%in2019 and 2020,respectively.Considering yield,WUE,NUE,WF,and NF together,ISCM should be used as a more sustainable and clean system for sustainable production of summer maize.
基金funded by the Science Foundation of China(Grant No.32230097)Earmarked Fund for China Agriculture Research System(Grant No.CARS-28)+2 种基金the Earmarked Fund for Jiangsu Agricultural Industry Technology System(Grant No.JATS[2023]412)Natural Science Foundation of Jiangsu Province for Young Scholar(Grant No.BK20221010)supported by the high-performance computing platform of Bioinformatics Center,Nanjing Agricultural University。
文摘Pear(Pyrus bretschneideri)fruit stone cells are primarily composed of lignin and have strongly lignified cell walls.The presence of stone cells has a negative influence on fruit texture and taste,and thus the reduction of stone cell content in pear fruit is a key goal of breeding efforts.However,research into the key transcription factors and regulatory networks associated with pear fruit stone cell formation have been limited.We here used a combination of co-expression network and expression quantitative trait locus(eQTL)analyses in 206 pear cultivars with different stone cell contents to identify relevant genes;these analyses uncovered the gene PbrMYB4,a R2R3 MYB transcription factor gene.There was a strong positive correlation between relative PbrMYB4 expression levels in the fruit flesh and stone cell/lignin contents.Overexpression of PbrMYB4 significantly increased the lignin contents,whereas silencing of PbrMYB4 had the opposite effect,decreasing the contents of lignin.PbrMYB4 overexpression in pear calli significantly promoted lignin biosynthesis.In Arabidopsis thaliana,PbrMYB4 overexpression resulted in increasing lignin deposition,cell wall thickness of vessels and xylary fiber,and accelerating expression level of lignin biosynthetic genes.PbrMYB4 was found to activate 4-Coumarate:Coenzyme A Ligase(Pbr4CL1)by binding to AC-I elements in the promoter regions,as demonstrated with dual-luciferase reporter assays and a yeast one-hybrid assay.These results demonstrated that PbrMYB4 positively regulated lignin biosynthesis in pear fruit stone cells by activating lignin biosynthesis genes.This study improves our understanding of the gene regulatory networks associated with stone cell formation in pear fruit,providing guidance for molecular breeding of pear varieties with low stone cell content.
基金supported by the Key Research and Development Program of Shandong Province,China(No 2021CXGC010803)Pan’an County Chinese Medicine Industry Project(No.PZYF202103).
文摘Reductive soil disinfestation(RSD)is commonly employed for soil remediation in greenhouse cultivation.However,its influence on antibiotic resistance genes(ARGs)in soil remains uncertain.This study investigated the dynamic changes in soil communities,potential bacterial pathogens,and ARG profiles under various organicmaterial treatments during RSD,including distillers’grains,potato peel,peanut vine,and peanut vine combined with charcoal.Results revealed that applying diverse organic materials in RSD significantly altered bacterial community composition and diminished the relative abundance of potential bacterial pathogens(P<0.05).The relative abundance of high-risk ARGs decreased by 10.7%-30.6%after RSD treatments,the main decreased ARG subtypeswere AAC(3)_Via,dfrA1,ErmB,lnuB,aadA.Actinobacteria was the primary host of ARGs and was suppressed by RSD.Soil physicochemical properties,such as total nitrogen,soil pH,total carbon,were crucial factors affecting ARG profiles.Our findings demonstrated that RSD treatment inhibited pathogenic bacteria and could be an option for reducing high-risk ARG proliferation in soil.
基金supported by the National Key Research and Development Program of China(2019YFD1001401)the National Natural Science Foundation of China(31872071 and U1903107).
文摘Resveratrol is an important secondary metabolite not only owing to its function as a phytoalexin,but also its potential benefits to human health.In this study,the content of trans-resveratrol was documented in seven accessions of grapevine,in the seed,pulp and skin of berries,and at three developmental stages.The highest amount(2.99μg g^(−1) FW)was found in the skin of berries at the ripe stage from V.amurensis‘Tonghua-3'.Resveratrol was not detected in several samples,including skin of berries at the green hard or véraison stage from V.davidii‘Tangwei'.We carried out transcriptional profiling of developing‘Tonghua-3'and‘Tangwei'berries to identify gene expression patterns that may be linked with the difference in resveratrol content between these accessions.The expression levels of several differentially expressed genes(DEGs)with presumed function in resveratrol biosynthesis,including STILBENE SYNTHASEs(STSs),CINNAMATE 4-HYDROXYLASEs(C4Hs)and 4-COUMARATE-COA LIGASEs(4CLs),were significantly higher in‘Tonghua-3',than in'Tangwei'during the véraison and ripe stages.Gene ontology and Kyoto Encyclopedia of Genes and Genomes analyses suggested that these DEGs were enriched for multiple biological processes at the three stages of fruit development.Additionally,we identified a total of 36 transcription factors,including MYBs,WRKYs,ERFs,bHLHs and bZIPs,that were coexpressed with 17 STSs via a weighted gene co-expression network analysis,suggesting roles as regulators of resveratrol biosynthesis.Overall,these findings provide insight into genotypic differences in resveratrol biosynthesis in grapevine,as well as the molecular genetics of its regulation.
基金supported by the National Key R&D Program of China (2021YFD1401000)the National Natural Science Foundation of China (32072358 and 32272507)the Natural Science Basic Research Plan in Shaanxi Province, China (2020JZ-15)。
文摘Wheat stripe rust, caused by Puccinia striiformis f. sp. tritici(Pst), is an airborne disease. In China, it frequently develops initially in central Shaanxi and southwestern Gansu, and from there, inoculum spreads to the eastern wheat production regions. Field investigations have suggested that Pst could spread from the west to the east within central Shaanxi andthat Gansu could serve as the inoculum source for central Shaanxi, but there is no direct evidence for this hypothetical dispersal route. In the current study, 321 Pst isolates collected from central Shaanxi and Gansu in the 2019–2020 and2020–2021 winter wheat cropping seasons were genotyped using 23 pairs of KASP-SNP markers. The dispersion among subpopulations was analyzed using several approaches, and overall, the populations were found to exhibit high levels of genetic diversity. There was little genetic divergence(0.05>FST>0) within central Shaanxi. However, significant gene flow(Nm>4) driven by wind-oriented dispersal from west(Baoji) to east(Weinan) occurred. There was also gene flow among the 4 Gansu subpopulations of Tianshui, Longnan, Pingliang, and Qingyang. Migration of the pathogen occurred between central Shaanxi and Gansu. Migration from Gansu to central Shaanxi was major compared with that from central Shaanxi to Gansu that was minor. Genetic variation occurred among isolates, instead of among subpopulations and within isolates. Linkage disequilibrium revealed that there was strong genetic recombination in the subpopulations from Gansu and central Shaanxi. Therefore, the present study provides molecular evidence that Pst spread from west to east in central Shaanxi and showed that Gansu(especially Longnan and Tianshui) was one of the major origins of the pathogen inoculum of wheat stripe rust in central Shaanxi. The results revealed the west-to-east transmission route of wheat stripe rust in central Shaanxi, being used to guide integrated management of the disease.
基金supported by the Science and Technology Key Research&Development Project of Shaanxi Province(2022NY-178)the Technical System of Minor Cereals Industry in Shaanxi Province(NYKJ-2022-YL(XN)28)the Special Fund for Seed Industrial Development in Shaanxi Province(K3031223130).
文摘Herbicide safeners alleviate herbicide toxicity while preserving weed-control efficacy in common buckwheat.A three-year field experiment was performed to measure the effects of quizalofop-P-ethyl(QPE)alone or in combination with gibberellin or brassinolide on soil enzyme activity and yield components in common buckwheat.The herbicide-brassinolide application yielded the greatest increases in soil enzyme activity and yield components without sacrificing weed control efficacy.It is recommended for use in common buckwheat cultivation in the Loess Plateau.
基金supported by the Biological Breeding-National Science and Technology Major Project(2023ZD0406804,2023ZD0402701)Major Project of Hubei Hongshan Laboratory(2022hszd019)First-Class Discipline Construction Funds of the College of Plant Science and Technology at Huazhong Agricultural University(2022ZK PY002)。
文摘Improving protein quality and grain yield traits coordinately is an important goal for crop breeding.To date,many protein-quality or grain-yield regulation genes have been identified.However,the genetic strategies integrating these genes in good-protein-quality and high-yield crop breeding practice are far from established.Here,we characterized the functions of the MADS domain-containing protein Zm MADS8 and Zea mays G protein gamma subunit 1(Zm GG1)in regulating protein quality and grain yield of maize.Zm MADS8 positively regulates zein protein accumulation and negatively regulates nonzein protein and lysine levels in kernels by interacting with Zm MADS47 to promote the transcriptional activation of Opaque2.Additionally,Zm MADS8 regulates starch content of kernels by targeting genes involved in starch biosynthesis.Zm GG1,a putative interactor of Zm MADS8,negatively regulates kernel number with a trade-off effect on kernel starch accumulation.The mads8;zmgg1 double mutant improved protein quality by attenuating zein biosynthesis and increasing essential lysine level,and increased grain yield by increasing kernel number,compensating for decreased starch biosynthesis.Our findings revealed the biological function of Zm MADS8 and Zm GG1 in regulating protein quality and yield related traits and suggested a genetic strategy by direct editing of Zm MADS8 and Zm GG1 to improve grain yield and protein quality simultaneously.
基金supported by the Postdoctoral Fellowship Program of China Postdoctoral Science Foudation(CPSF)(GZC20241394)the Shaanxi Province Natural Science Basic Research Program-Youth Project,China(2025JCYBQN271)+2 种基金the National Natural Science Foundation of China(31371529)the Shaanxi Province“Two Chains”Integrated Crop Breeding Key Project,China(2021LLRH07)the Minor Grain Crops Research and Development System of Shaanxi Province,China(NYKJ-2021YL(XN)40)。
文摘Nitrogen fertilizer is an important agronomic measure significantly affecting crop yield and grain quality.This twoyear study aimed to explore the effects of four nitrogen levels on the morphology,lamellar and crystalline structure,pasting,and rheological properties of proso millet(PM)starch and to investigate potential food applications of PM.The results showed that the starch surface became uneven,and the structure of the starch granules shifted towards greater complexity with increasing nitrogen levels.Nitrogen increased the relative crystallinity,ordered structure,and average repeat distance,leading to a stable starch structure and a higher gelatinization enthalpy.Furthermore,nitrogen significantly increased peak,breakdown,setback,and final viscosities but decreased apparent amylose content,which caused the shear resistance and storage capacity of PM starch-based foods to deteriorate during processing and transport.Rheological analysis showed that PM starch exhibited the typical characteristics of a pseudoplastic fluid.Under nitrogen treatment,PM starch gels showed high potential for application in 3D printing products due to high resistance to shear thinning,gel strength,and yield stress,presumably owing to the significantly higher G′than G′′,and the lower amylose content,which in turn promoted the formation of a stable network structure in water to immobilize more water.Our study provides a reference for applying PM starch in the food industry and for developing PM cropping-management programs to improve quality.
基金financially supported by the National Natural Science Foundation of China(Grant Nos.32202518 and 32070601)Shandong University of Technology PhD Start-up Fund(418097)。
文摘Tomato(Solanum lycopersicum)is an extensively cultivated vegetable,and its growth and fruit quality can be significantly impaired by low temperatures.The widespread presence of N^(6)-methyladenosine(m^(6)A)modification on RNA is involved in a diverse range of stress response processes.There is a significant knowledge gap regarding the precise roles of m^(6)A modification in tomato,particularly for cold stress response.Here,we assessed the m^(6)A modification landscape of S.lycopersicum'Micro-Tom'leaves in response to low-temperature stress.Furthermore,we investigated the potential relationship among m^(6)A modification,transcriptional regulation,alternative polyadenylation events,and protein translation via MeRIP-seq,RNA-seq,and protein mass spectrometry.After omic date analysis,11378 and 10735 significant m^(6)A peak associated genes were identified in the control and cold treatment tomato leaves,respectively.Additionally,we observed a UGUACAK(K=G/U)motif under both conditions.Differential m^(6)A site associated genes most likely play roles in protein translation regulatory pathway.Besides directly altering gene expression levels,m^(6)A also leads to differential poly(A)site usage under low-temperature.Finally,24 important candidate genes associated with cold stress were identified by system-level multi-omic analysis.Among them,m^(6)A modification levels were increased in SBPase(Sedoheptulose-1,7-bisphosphatase,Solyc05g052600.4)mRNA,causing distal poly(A)site usage,downregulation of mRNA expression level,and increased protein abundance.Through these,tomato leaves try to maintain normal photo synthetic carbon assimilation and nitro gen metabolism under low-temperature condition.The comprehensive investigation of the m^(6)A modification landscape and multi-omics analysis provide valuable insights into the epigenetic regulatory mechanisms in tomato cold stress response.
基金supported by the China Agriculture Research System of MOF and MARA(CARS-06-A26)the“Two-chain”Fusion Crop Breeding Key Project of Shaanxi,China(2021-LLRH-07)。
文摘Photosynthesis is the basis of crop growth and is sensitive to stress.Smut(Sporisorium destruens)is the primary disease in the production of broomcorn millet(Panicum miliaceum L.).This study evaluated the effects of infection with S.destruens on the photosynthesis of the resistant cultivar(BM)and susceptible cultivar(NF).After inoculation,there was a decrease in the chlorophyll content,gas exchange parameters,and chlorophyll fluorescence of the two cultivars.Observation of the ultrastructure of diseased leaves showed that the chloroplasts and mitochondria had abnormal morphology,and some vacuoles appeared.RNA-seq was performed on the flag leaves after inoculation.In addition to the resistant and susceptible cultivars,the diseased leaves developed from inflorescences were defined as S2.The analysis showed that the pathways related to photosynthesis stimulated some differentially expressed genes(DEGs)after infection with S.destruens.More DEGs were induced in the susceptible broomcorn millet NF than in the resistant broomcorn millet BM,and most of those genes were downregulated.The number of DEGs induced by S2 was greater than that in susceptible cultivar NF,and most of them were upregulated.These results indicate that infection with S.destruens affects the normal photosynthetic performance of broomcorn millet.Understanding the mechanism between S.destruens,photosynthesis,and broomcorn millet is an effective measure to prevent the occurrence of smut and enhance its resistance.
