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CTNS Molecular Genetics Profile in a Portuguese Cystinosis Population
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作者 Filipa Ferreira Ines Leal +14 位作者 David Sousa Teresa Costa Conceicao Mota Ana Marta Gomes Daniela Lopes Maria do Carmo Macario Isabel Tavares Helena Pinto Joao Paulo Oliveira Rita Magrico Celia Carmona Sonia Ramos Raquel Neiva Ana Marcao Laura Vilarinho 《Open Journal of Genetics》 2018年第4期91-100,共10页
Background: Cystinosis is a multisystemic autosomal recessive deficiency of the lysosomal membrane transporter protein (cystinosin) caused by mutations in CTNS gene. Objective: This study summarizes the Portuguese exp... Background: Cystinosis is a multisystemic autosomal recessive deficiency of the lysosomal membrane transporter protein (cystinosin) caused by mutations in CTNS gene. Objective: This study summarizes the Portuguese experience in the diagnosis and management of patients with this rare disease over the past few years and reports recurrent mutations in the CTNS gene. Methods: Unrelated patients from different pediatric and adult hospitals all over Portugal with non-nephrotic proteinuria, hypercalciuria, hypokalemia impaired proximal reabsorption of amino acids, glycosuria and hypophosphatemia, suggestive of a Fanconi syndrome and ocular problems, were studied. Intra-leukocyte cystine levels were determined and molecular analysis was performed, to determine the presence or absence of the 57-kb deletion in CTNS, followed by direct sequencing of the coding exons of CTNS. Results: From 1998 to 2017, twenty-one cystinotic patients were biochemically diagnosed. From the remaining seventeen (four deceased), eleven were studied for CTNS gene. Five out of eleven patients were homozygous for the 57-kb deletion (10/22;45.5%), and other five were compound heterozygous for this variant (15/22;68.2%). The other mutations found were p.Q128X (c.721 C>T;2/22), p.S139F (c.755 C>T;4/22) and c.18-21delGACT (p.T7FfsX7;1/22). All of these seventeen cystinotic patients are in treatment. Approximately 84% are adults, 16% are young children, and 54.5% are kidney transplant recipient. Conclusions: The authors would like to emphasize the importance of first screening for the 57-kb deletion since it is very common in our population. This genetic study is the first in our country and it could be the basis for future genetic counseling in Portuguese population. 展开更多
关键词 CYSTINOSIS CTNS Gene Mutational Spectrum Kidney Failure 57-kb Deletion
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Effect of the phytohormone salicylic acid on the salinity thresholds to seed germination and seedling growth in the oilseed Camelina sativa
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作者 Esmaeil Bakhshandeh Fatemeh Hosseini Sanehkoori +2 位作者 Najmeh Mirzaaghpour Charlotte E.Seal Mozhgan Alinia 《Oil Crop Science》 2025年第1期1-8,共8页
The oilseed crop Camelina sativa exhibits salinity tolerance,but the effects on early growth stages across a range of different salts and in combination with salicylic acid(SA)have not been thoroughly evaluated.In thi... The oilseed crop Camelina sativa exhibits salinity tolerance,but the effects on early growth stages across a range of different salts and in combination with salicylic acid(SA)have not been thoroughly evaluated.In this study,seeds were germinated in varying concentrations of six salts(NaCl,CaCl_(2),ZnCl_(2),KCl,MgSO_(4),and Na2SO_(4))with or without 0.5 mM SA.Using the halotime model,we estimated salt thresholds for germination and parameters of seedling growth.Germination and seedling growth parameters of camelina significantly decreased with increasing salt concentration across all salt types.Salts containing Zn and SO_(4) were most detrimental to germination and seedling growth.Except for KCl,0.5 mM SA generally reduced the salinity tolerance threshold(Saltb(50))of camelina.Specifically,Saltb(50)was 21.5%higher for KCl and 16.1%,25.0%,54.9%,21.0%,and 5.6%lower for CaCl_(2),NaCl,MgSO_(4),Na2SO_(4),and ZnCl_(2),respectively,when 0.5 mM SA was compared to 0 mM SA.Furthermore,camelina seedling growth was consistently more sensitive than germination across all salt types.SA did not significantly enhance germination or seedling growth and was harmful when combined with certain salts or at the germination stage.It can be concluded that both the type of salt and the concentration of SA are as critical as the salt concentration in saline irrigation water. 展开更多
关键词 Germination percentage Germination rate Seedling growth Salt tolerance threshold value
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Encapsulation for efficient cryopreservation
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作者 Kashan Memon Bing Zhang +1 位作者 Muhammad Azam Fareed Gang Zhao 《Frigid Zone Medicine》 2025年第2期73-80,共8页
Cryopreservation is a fundamental technology in biomedical research,regenerative medicine,and tissue engineering,enabling the long-term storage of cells,tissues,and organs.However,its effectiveness is limited by chall... Cryopreservation is a fundamental technology in biomedical research,regenerative medicine,and tissue engineering,enabling the long-term storage of cells,tissues,and organs.However,its effectiveness is limited by challenges such as intracellular ice formation,cryoprotectant toxicity,and reduced post-thaw viability.This review explores the crucial role of encapsulation in enhancing cryopreservation efficiency,with a focus on recent advances in materials science,bioengineering,and cryobiology.Emerging technologies,such as nanotechnology and stimuli-responsive polymers,are transforming encapsulation strategies.Innovations such as microfluidic systems offer precise control over cooling rates and cryoprotectant distribution,thereby mitigating conventional limitations.The review also addresses current obstacles related to scaling up encapsulation processes and ensuring the long-term biocompatibility and stability of preserved specimens.By synthesizing recent findings,this work provides a comprehensive resource for researchers and clinicians seeking to enhance biopreservation techniques and their applications in contemporary medicine and biotechnology.Finally,the review identifies critical knowledge gaps that must be addressed to improve the efficacy of cryopreservation strategies and advance their clinical translation. 展开更多
关键词 CRYOPRESERVATION ENCAPSULATION HYDROGELS BIOMATERIALS tissue engineering regenerative medicine NANOTECHNOLOGY smart polymers
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Antioxidant strategies to mitigate oxidative stress-induced cryodamage in oocytes
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作者 Elnaz Zand Gang Zhao 《Frigid Zone Medicine》 2025年第2期81-90,共10页
Oocyte cryopreservation is an essential procedure in assisted reproductive technologies,aimed at preserving fertility,particularly for women undergoing IVF treatment or at risk of ovarian damage due to radiation,chemo... Oocyte cryopreservation is an essential procedure in assisted reproductive technologies,aimed at preserving fertility,particularly for women undergoing IVF treatment or at risk of ovarian damage due to radiation,chemotherapy,or surgery.Despite its growing use,the survival and fertilization rates of cryopreserved oocytes remain suboptimal,largely due to cryo-induced oxidative stress.The generation of Reactive Oxygen Species(ROS)during freezing and thawing causes considerable damage to key cellular components,including proteins,lipids,DNA,and mitochondria.This oxidative stress compromises oocyte quality and reduces developmental potential.To address these challenges,the use of additives-especially antioxidants-has shown significant promise in mitigating oxidative damage.Enzymatic antioxidants such as Superoxide Dismutase(SOD)and Catalase(CAT),along with non-enzymatic antioxidants like glutathione,melatonin,and resveratrol,have demonstrated the ability to neutralize ROS and improve oocyte viability and developmental outcomes.Recent studies highlight the potential of Mitoquinone(MitoQ),a mitochondria-targeted antioxidant,to effectively counteract mitochondrial ROS and enhance cellular defense mechanisms during cryopreservation.This review explores the cellular mechanisms of cryodamage,the role of oxidative stress in oocyte cryopreservation,and the potential of various antioxidant strategies to enhance oocyte survival and function.Developing effective antioxidant supplementation approaches may significantly improve the outcomes of cryopreservation in reproductive medicine. 展开更多
关键词 ANTIOXIDANTS OOCYTE CRYOPRESERVATION oxidative stress
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Cryopreservation of bovine sperm causes single‑strand DNA breaks that are localized in the toroidal regions of chromatin
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作者 Jordi Ribas‑Maynou Rodrigo Muiño +1 位作者 Carolina Tamargo Marc Yeste 《Journal of Animal Science and Biotechnology》 2025年第1期92-106,共15页
Background Sperm cryopreservation is widely used in the cattle industry,as it allows for disassociating the localiza-tion of sires and the collection of semen from the timing of artificial insemination.While freeze-th... Background Sperm cryopreservation is widely used in the cattle industry,as it allows for disassociating the localiza-tion of sires and the collection of semen from the timing of artificial insemination.While freeze-thawing is known to impair sperm DNA integrity,whether the damage induced consists of single-(SSB)or double-strand breaks(DSB)has not been determined.In addition,no previous study has addressed if DNA breaks preferentially reside in specific genome regions such as those forming the toroid linker regions,or are rather spread throughout the regions linked to protamines.The main aim of the present work,therefore,was to elucidate the type and localization of the DNA damage generated by cryopreservation and to evaluate its impact on artificial insemination outcomes in cattle.Results The incidence of SSB and DSB was evaluated in 12 ejaculates before and after cryopreservation with the Comet assay,and the localization of the DNA breaks was assessed using pulsed-field gel electrophoresis(PFGE).Before cryopreservation,the incidence of SSB was 10.99%±4.62%and involved 20.56%±3.04%of sperm cells,whereas these figures significantly(P<0.0001)increased up to 34.11%±3.48%and 53.36%±11.00%in frozen-thawed sperm.In contrast,no significant differences in the incidence of DSB were observed(P>0.990)before and after cryopreservation(before:incidence of 13.91%±1.75%of sperm DNA affecting 56.04%±12.49%of sperm cells;after:incidence of 13.55%±1.55%of sperm DNA involving 53.36%±11.00%of sperm cells).Moreover,PFGE revealed that the percentage of sperm DNA fragments whose length was shorter than a toroid(<31.5 kb)was greater(P<0.0001)after(27.00%±4.26%)than before freeze-thawing(15.57%±4.53%).These differences indicated that the DNA breaks induced by cryopreservation affect the regions condensed in protamines,which are structured in toroids.On the other hand,in vivo fertility rates were associated to the incidence of SSB and DSB in frozen-thawed sperm(P=0.032 and P=0.005),but not with the size of the DNA fragments resulting from these breaks(P>0.05).Conclusion Cryopreservation of bovine sperm generates single-strand DNA breaks,which are mainly located in protamine-condensed toroidal regions.The incidence of DNA breaks in cryopreserved sperm has an impact on cat-tle fertility,regardless of the size of generated fragments. 展开更多
关键词 Cattle DNA damage Fertility SPERM Toroid linker regions
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Discovering a new paradigm:Gut microbiota as a central modulator of sexual health
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作者 Giuseppe Marano Maria B Anesini +8 位作者 Miriam Milintenda Mariateresa Acanfora Claudia d’Abate Francesco M Lisci Ilaria Pirona Gianandrea Traversi Roberto Pola Eleonora Gaetani Marianna Mazza 《World Journal of Gastrointestinal Pathophysiology》 2025年第3期20-43,共24页
The gut microbiota plays a pivotal role in human health,influencing diverse physiological processes,including those related to sexual health.Emerging evidence suggests a bidirectional relationship between the gut micr... The gut microbiota plays a pivotal role in human health,influencing diverse physiological processes,including those related to sexual health.Emerging evidence suggests a bidirectional relationship between the gut microbiota and sexual health,mediated by its impact on systemic inflammation,hormonal regulation,and immune function.A balanced gut microbiota supports optimal levels of sex hormones,such as estrogen and testosterone,which are critical for sexual function and reproductive health.Additionally,gut-derived metabolites such as short-chain fatty acids contribute to maintaining mucosal barrier integrity and regulating immune responses,which are essential for protecting against infections that may impair sexual health.Conversely,dysbiosis,an imbalance in gut microbial composition,has been linked to conditions such as erectile dysfunction,polycystic ovary syndrome,and reduced libido,emphasizing its role in sexual dysfunction.Lifestyle factors,including diet,stress,and antibiotic use,can modulate the gut microbiota and,consequently,sexual health outcomes.Recent therapeutic approaches,such as probiotics,prebiotics,and fecal microbiota transplantation,offer potential for restoring gut balance and improving sexual health.This review highlights the central role of the gut microbiota in sexual health,emphasizing its importance as a target for therapeutic interventions to enhance overall well-being. 展开更多
关键词 Gut microbiota Sexual health Mental health DYSBIOSIS Gut brain axis Short-chain fatty acids NEUROTRANSMITTERS Hormonal regulation Sexual performance anxiety DIET Psychobiotics Psychological therapies
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Integrated analysis and systematic characterization of the regulatory network for human germline development
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作者 Yashi Gu Jiayao Chen +16 位作者 Ziqi Wang Qizhe Shao Zhekai Li Yaxuan Ye Xia Xiao Yitian Xiao Wenyang Liu Sisi Xie Lingling Tong Jin Jiang Xiaoying Xiao Ya Yu Min Jin Yanxing Wei Robert S.Young Lei Hou Di Chen 《Journal of Genetics and Genomics》 2025年第2期204-219,共16页
Primordial germ cells(PGCs)are the precursors of germline that are specified at the embryonic stage.Recent studies reveal that humans employ different mechanisms for PGC specification compared with model organisms suc... Primordial germ cells(PGCs)are the precursors of germline that are specified at the embryonic stage.Recent studies reveal that humans employ different mechanisms for PGC specification compared with model organisms such as mice.Moreover,the specific regulatory machinery remains largely unexplored,mainly due to the inaccessible nature of this complex biological process in humans.Here,we curate and integrate multi-omics data,including 581 RNA-seq,54 ATAC-seq,45 ChIP-seq,and 69 single-cell RNA-seq samples from different stages of human PGC development to recapitulate the precisely controlled and stepwise process,presenting an atlas in the human PGC database(hPGCdb).With these uniformly processed data and integrated analyses,we characterize the potential key transcription factors and regulatory networks governing human germ cell fate.We validate the important roles of some of the key factors in germ cell development by CRISPRi knockdown.We also identify the soma-germline interaction network and discover the involvement of SDC2 and LAMA4 for PGC development,as well as soma-derived NOTCH2 signaling for germ cell differentiation.Taken together,we have built a database for human PGCs(http://43.131.248.15:6882)and demonstrate that hPGCdb enables the identification of the missing pieces of mechanisms governing germline development,including both intrinsic and extrinsic regulatory programs. 展开更多
关键词 Primordial germ cells Regulatory network Soma-germ cell interaction DATABASE
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贝叶斯因子及其在JASP中的实现 被引量:54
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作者 胡传鹏 孔祥祯 +2 位作者 Eric-Jan Wagenmakers Alexander Ly 彭凯平 《心理科学进展》 CSSCI CSCD 北大核心 2018年第6期951-965,共15页
统计推断在科学研究中起到关键作用,然而当前科研中最常用的经典统计方法——零假设检验(Null hypothesis significance test,NHST)却因难以理解而被部分研究者误用或滥用。有研究者提出使用贝叶斯因子(Bayes factor)作为一种替代和(或... 统计推断在科学研究中起到关键作用,然而当前科研中最常用的经典统计方法——零假设检验(Null hypothesis significance test,NHST)却因难以理解而被部分研究者误用或滥用。有研究者提出使用贝叶斯因子(Bayes factor)作为一种替代和(或)补充的统计方法。贝叶斯因子是贝叶斯统计中用来进行模型比较和假设检验的重要方法,其可以解读为对零假设H_0或者备择假设H_1的支持程度。其与NHST相比有如下优势:同时考虑H_0和H_1并可以用来支持H_0、不"严重"地倾向于反对H_0、可以监控证据强度的变化以及不受抽样计划的影响。目前,贝叶斯因子能够很便捷地通过开放的统计软件JASP实现,本文以贝叶斯t检验进行示范。贝叶斯因子的使用对心理学研究者来说具有重要的意义,但使用时需要注意先验分布选择的合理性以及保持数据分析过程的透明与公开。 展开更多
关键词 贝叶斯因子 贝叶斯学派 频率学派 假设检验 JASP
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短发夹状RNA在人细胞诱导RNA干扰(英文) 被引量:7
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作者 陈扬超 宋超 罗超权 《癌症》 SCIE CAS CSCD 北大核心 2003年第6期566-570,共5页
背景与目的:RNA干扰是一种通过细胞内导入双链RNA而导致特异基因表达抑制的进化保守的转录后基因沉默现象,目前RNA干扰已成为研究基因功能的重要方法。本研究旨在利用DNA载体在细胞内产生短发夹状RNA(shorthairpinRNAs,shRNA),通过这些s... 背景与目的:RNA干扰是一种通过细胞内导入双链RNA而导致特异基因表达抑制的进化保守的转录后基因沉默现象,目前RNA干扰已成为研究基因功能的重要方法。本研究旨在利用DNA载体在细胞内产生短发夹状RNA(shorthairpinRNAs,shRNA),通过这些shRNA来诱导RNA干扰(RNAinterference,RNAi),为基因功能分析提供新的实验手段。方法:利用双荧光素酶报告系统来检测DNA载体在细胞内产生的shRNA诱导RNAi的效果。比较该载体产生的shRNA在不同条件下的RNA干扰效果。结果:DNA载体产生的shRNA在人细胞能诱导RNAi,序列特异地抑制基因表达。抑制效果与所选基因靶位点高度相关。结论:shRNA在人细胞能诱导RNA干扰,序列特异地抑制基因表达,这一方法可用于基因功能分析。 展开更多
关键词 短发夹状RNA RNA干扰 DNA载体 双荧光素酶报告系统 基因表达 细胞生物学
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Expression of hepatitis B virus genes in early embryonic cells originated from hamster ova and human spermatozoa transfected with the complete viral genome 被引量:64
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作者 Bahy Ahmed Ali Tian-Hua Huang +1 位作者 Halima-Hassan Salem Qing-Dong Xie 《Asian Journal of Andrology》 SCIE CAS CSCD 2006年第3期273-279,共7页
Aim: To detect the expression of hepatitis B virus (HBV) genes (HB S and C genes) in early embryonic cells after introducing motile human sperm carrying HBV DNA into zona-free hamster oocytes via the in vitro fer... Aim: To detect the expression of hepatitis B virus (HBV) genes (HB S and C genes) in early embryonic cells after introducing motile human sperm carrying HBV DNA into zona-free hamster oocytes via the in vitro fertilization (IVF) technique. Methods: Human sperm-mediated HBV genes were delivered into zona-free hamster oocytes by the IVF method. Polymerase chain reaction (PCR) was used to detect HB S and pre-Core/Core (pre-C/C) coding genes both in one- and two-cell embryos. Reverse transcription-PCR (RT-PCR) analysis was used to study the expression of the two genes. Fluorescence in situ hybridization (FISH) analysis using the full-length HBV DNA as the hybridization probe was performed to confirm the integration of viral DNA in the host embryonic genome. Results: Both HB S and pre-C/C coding genes are present and transcribed in one- and two-cell embryos originated from hamster ova IVF with human spermatozoa carrying HBV DNA sequences. Conclusion: Sperm-mediated HBV genes are able to replicate and express themselves in early embryonic cells. These results provide direct evidence that HBV DNA could transmit vertically to the next generation via the male germ line. 展开更多
关键词 hepatitis B virus gene expression hamster ovary human spermatozoa in vitro fertilization
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Comparison of bacterial community structures in two systems of a sewage treatment plant using PCR-DGGE analysis 被引量:27
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作者 Abd El-Latif Hesham Rong Qi Min Yang 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2011年第12期2049-2054,共6页
The combination of PCR amplification of 16S rRNA genes with denaturing gradient gel electrophoresis (DGGE) analysis was used to reveal the compositions and dynamics of bacterial communities in a sewage treatment pla... The combination of PCR amplification of 16S rRNA genes with denaturing gradient gel electrophoresis (DGGE) analysis was used to reveal the compositions and dynamics of bacterial communities in a sewage treatment plant with two systems, i.e., an anoxic- anaerobic-aerobic system (inverted A2O) and an anaerobic-anoxic-aerobic one (conventional A2O) over a period from February to July 2009, during which both systems experienced serious sludge bulking problems. The DGGE patterns showed that there were many common bands in both systems, suggesting the high similarity of bacterial communities of the two systems. Meanwhile, the moving window correlation analysis showed that the two systems experienced different microbial community structure changes during the period, which might be related with the different situations of the occurrence and disappearance of sludge bulking, as being reflected by sludge volume index (SVI) values. Major bands of DGGE patterns of sludge samples were further sequenced. Phylogenetic affiliation indicated that the majority of the sequences obtained were affiliated with Actinobacteria, Firmicutes, Bacteroidetes/Chlorobi group and α- and β-Proteobacteria. Two sequences showed high similarities to typical filamentous bacteria Microthrix parvicella and Nostocoida limicola I, indicating that these bacterial species have been involved in the sludge bulking problems. 展开更多
关键词 PCR-DGGE bacterial community activated sludge sludge bulking sewage treatment plant
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Hepatogenic differentiation of mesenchymal stem cells induced by insulin like growth factor-Ⅰ 被引量:10
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作者 Maryam Ayatollahi Masoud Soleimani +1 位作者 Seyed Ziaadin Tabei Maryam Kabir Salmani 《World Journal of Stem Cells》 SCIE CAS 2011年第12期113-121,共9页
AIM:To improve hepatic differentiation of human mesenchymal stem cell(MSC)using insulin growth factor 1(IGF-Ⅰ),which has important role in liver development,hepatocyte differentiation and function.METHODS:Bone marrow... AIM:To improve hepatic differentiation of human mesenchymal stem cell(MSC)using insulin growth factor 1(IGF-Ⅰ),which has important role in liver development,hepatocyte differentiation and function.METHODS:Bone marrow of healthy donors was aspirated from the iliac crest.The adherent cells expanded rapidly and were maintained with periodic passages until a relatively homogeneous population was established.The identification of these cells was carried out by immunophenotype analysis and differentiation potential into osteocytes and adipocytes.To effectively induce hepatic differentiation,we designed a protocol based on a combination of IGF-Ⅰ and liver specificfactors(hepatocyte growth factor,oncostatin M and dexamethasone).Morphological features,hepatic functions and cytological staining were assessed to evaluate transdifferentiation of human marrow-derived MSCs.RESULTS:Flow cytometric analysis and the differentiation potential into osteoblasts and adipocytes showed that more than 90% of human MSCs which were isolated and expanded were positive by specif ic markers and functional tests.Morphological assessment and evaluation of glycogen storage,albumin and α-feto protein expression,as well as albumin and urea secretion revealed a statistically signif icant difference between the experimental groups and control.CONCLUSION:In vitro differentiated MSCs using IGF-Ⅰwere able to display advanced liver metabolic functions,supporting the possibility of developing them as potential alternatives to primary hepatocytes. 展开更多
关键词 MESENCHYMAL STEM cell DIFFERENTIATION HEPATOCYTE INSULIN-LIKE growth FACTOR 1 Human
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RNA in human sperm 被引量:7
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作者 Rui Pires Martins Stephen A.Krawetz 《Asian Journal of Andrology》 SCIE CAS CSCD 2005年第2期115-120, ,共6页
We have yet to develop a fundamental understanding of the molecular complexities of human spermatozoa.This encompasses the unique packaging and structure of the sperm genome along with their paternally derived RNAs in... We have yet to develop a fundamental understanding of the molecular complexities of human spermatozoa.This encompasses the unique packaging and structure of the sperm genome along with their paternally derived RNAs in preparation for their delivery to the egg.The diversity of these transcripts is vast,including several anti-sense mol- ecules resembling known regulatory micro-RNAs.The field is still grasping with its delivery to the oocyte at fertiliza- tion and possible significance.It remains tempting to analogize them to maternally-derived transcripts active in early embryo patterning.Irrespective of their role in the embryo,their use as a means to assess male factor infertility is promising. 展开更多
关键词 RNA SIRNA miRNA SPERM MICROARRAY FERTILIZATION DIAGNOSTICS
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Frequent loss of heterozygosity at 8p22 chromosomal region in diffuse type of gastric cancer 被引量:9
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作者 Hedayat Allah Hosseini Ali Ahani +4 位作者 Hamid Galehdari Ali Mohammad Froughmand Masoud Hosseini Abdolrahim Masjedizadeh Mohammad Reza Zali 《World Journal of Gastroenterology》 SCIE CAS CSCD 2007年第24期3354-3358,共5页
AIM: To study the loss of heterozygosity (LOH) at 8p21-23 locus in diffuse gastric cancer.METHODS: To evaluate the involvement of this region in gastric cancer, we used eight microsatellite markers covering two Mb of ... AIM: To study the loss of heterozygosity (LOH) at 8p21-23 locus in diffuse gastric cancer.METHODS: To evaluate the involvement of this region in gastric cancer, we used eight microsatellite markers covering two Mb of mentioned region, to perform a high-resolution analysis of allele loss in 42 cases of late diffuse gastric adenocarcinoma.RESULTS: Six of these STS makers: D8S1149, D8S1645, D8S1643, D8S1508, D8S1591, and D8S1145 showed 36%, 28%, 37%, 41%, 44% and 53% LOH, respectively.CONCLUSION: A critical region of loss, close to the NAT2 locus and relatively far from FEZ1 gene currently postulated as tumor suppressor gene in this region. 展开更多
关键词 loss of heterozygosity Tumor suppressor genes diffuse type of gastric cancer STS marker N-Acetyltransferase 2 FEZ1
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以苯丙氨酸为例刍议芳香族氨基酸的生物合成机理 被引量:2
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作者 蒋振雄 王志鹏 +4 位作者 马新雨 颜惠娟 缑允梓 尹晟 王鹏 《化学教育(中英文)》 CAS 北大核心 2021年第2期71-79,共9页
从磷酸烯醇式丙酮酸和4-磷酸赤藓糖为始探讨了3种芳香族氨基酸合成代谢共享的分支酸合成途径,并以苯丙氨酸为例从多学科角度讨论分析其合成代谢的独特性。通过多学科角度展示了生物体内不同代谢路径之间的关联及相似性,旨在展示一种教... 从磷酸烯醇式丙酮酸和4-磷酸赤藓糖为始探讨了3种芳香族氨基酸合成代谢共享的分支酸合成途径,并以苯丙氨酸为例从多学科角度讨论分析其合成代谢的独特性。通过多学科角度展示了生物体内不同代谢路径之间的关联及相似性,旨在展示一种教学新模式,帮助学生建立起跨学科内容的学习及归纳方法。 展开更多
关键词 苯丙氨酸 芳香氨基酸 生物化学 必需氨基酸
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Roles of the Y chromosome genes in human cancers 被引量:10
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作者 Tatsuo Kido Yun-Fai Chris Lau 《Asian Journal of Andrology》 SCIE CAS CSCD 2015年第3期373-380,共8页
Male and female differ genetically by their respective sex chromosome composition, that is, XY as male and XX as female. Although both X and Y chromosomes evolved from the same ancestor pair of autosomes, the Y chromo... Male and female differ genetically by their respective sex chromosome composition, that is, XY as male and XX as female. Although both X and Y chromosomes evolved from the same ancestor pair of autosomes, the Y chromosome harbors male-specific genes, which play pivotal roles in male sex determination, germ cell differentiation, and masculinization of various tissues. Deletions or translocation of the sex-determining gene, SRY, from the Y chromosome causes disorders of sex development (previously termed as an intersex condition) with dysgenic gonads. Failure of gonadal development results not only in infertility, but also in increased risks of germ cell tumor (GCT), such as gonadoblastoma and various types of testicular GCT. Recent studies demonstrate that either loss of Y chromosome or ectopic expression of Y chromosome genes is closely associated with various male-biased diseases, including selected somatic cancers. These observations suggest that the Y-linked genes are involved in male health and diseases in more frequently than expected. Although only a small number of protein-coding genes are present in the male-specific region of Y chromosome, the impacts of Y chromosome genes on human diseases are still largely unknown, due to lack of in vivo models and differences between the Y chromosomes of human and rodents. In this review, we highlight the involvement of selected Y chromosome genes in cancer development in men. 展开更多
关键词 germ cell tumors RBMY Y-linked somatic cancers TSPY Y chromosome
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p38α MAPK pathway:A key factor in colorectal cancer therapy and chemoresistance 被引量:22
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作者 Valentina Grossi Alessia Peserico +1 位作者 Tugsan Tezil Cristiano Simone 《World Journal of Gastroenterology》 SCIE CAS 2014年第29期9744-9758,共15页
Colorectal cancer (CRC) remains one of the most common malignancies in the world. Although surgical resection combined with adjuvant therapy is effective at the early stages of the disease, resistance to conventional ... Colorectal cancer (CRC) remains one of the most common malignancies in the world. Although surgical resection combined with adjuvant therapy is effective at the early stages of the disease, resistance to conventional therapies is frequently observed in advanced stages, where treatments become ineffective. Resistance to cisplatin, irinotecan and 5-fluorouracil chemotherapy has been shown to involve mitogen-activated protein kinase (MAPK) signaling and recent studies identified p38&#x003b1; MAPK as a mediator of resistance to various agents in CRC patients. Studies published in the last decade showed a dual role for the p38&#x003b1; pathway in mammals. Its role as a negative regulator of proliferation has been reported in both normal (including cardiomyocytes, hepatocytes, fibroblasts, hematopoietic and lung cells) and cancer cells (colon, prostate, breast, lung tumor cells). This function is mediated by the negative regulation of cell cycle progression and the transduction of some apoptotic stimuli. However, despite its anti-proliferative and tumor suppressor activity in some tissues, the p38&#x003b1; pathway may also acquire an oncogenic role involving cancer related-processes such as cell metabolism, invasion, inflammation and angiogenesis. In this review, we summarize current knowledge about the predominant role of the p38&#x003b1; MAPK pathway in CRC development and chemoresistance. In our view, this might help establish the therapeutic potential of the targeted manipulation of this pathway in clinical settings. 展开更多
关键词 p38 mitogen-activated protein kinase CHEMORESISTANCE Molecularly-targeted drugs Colorectal cancer Cell death
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刍议组蛋白去乙酰化酶的结构分类与功能调控 被引量:1
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作者 王志鹏 张璇 +2 位作者 蒋振雄 车子良 马新雨 《生命的化学》 CAS CSCD 2020年第12期2151-2161,共11页
赖氨酸乙酰化是一类典型的组蛋白翻译后修饰,受到组蛋白乙酰转移酶(HAT)和组蛋白去乙酰化酶(HDAC)的共同精细调控。尽管HDAC一直是学科研究的前沿问题,但在国内科研综述或教学中缺乏相关内容的阐述。本文从HDAC的发现历史和去除乙酰化... 赖氨酸乙酰化是一类典型的组蛋白翻译后修饰,受到组蛋白乙酰转移酶(HAT)和组蛋白去乙酰化酶(HDAC)的共同精细调控。尽管HDAC一直是学科研究的前沿问题,但在国内科研综述或教学中缺乏相关内容的阐述。本文从HDAC的发现历史和去除乙酰化的机制入手,在现有对HDAC分类的基础上,依次概述了4类HDAC的基本结构特征和生物功能。此外,本文还分析了针对不同HDAC的抑制剂及其在医学药学中的应用,旨在为相关的靶点研究及教学工作提供参考。 展开更多
关键词 赖氨酸乙酰化 去乙酰化酶 组蛋白去乙酰化酶抑制剂
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White Matter Abnormalities in Major Depression Biotypes Identified by Diffusion Tensor Imaging 被引量:10
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作者 Sugai Liang Qiang Wang +11 位作者 Xiangzhen Kong Wei Deng Xiao Yang Xiaojing Li Zhong Zhang Jian Zhang Chengcheng Zhang Xin-min Li Xiaohong Ma Junming Shao Andrew J. Greenshaw Tao Li 《Neuroscience Bulletin》 SCIE CAS CSCD 2019年第5期867-876,共10页
Identifying data-driven biotypes of major depressive disorder(MDD) has promise for the clarification of diagnostic heterogeneity. However, few studies have focused on white-matter abnormalities for MDD subtyping. This... Identifying data-driven biotypes of major depressive disorder(MDD) has promise for the clarification of diagnostic heterogeneity. However, few studies have focused on white-matter abnormalities for MDD subtyping. This study included 116 patients with MDD and118 demographically-matched healthy controls assessed by diffusion tensor imaging and neurocognitive evaluation.Hierarchical clustering was applied to the major fiber tracts, in conjunction with tract-based spatial statistics, to reveal white-matter alterations associated with MDD.Clinical and neurocognitive differences were compared between identified subgroups and healthy controls. With fractional anisotropy extracted from 20 fiber tracts, cluster analysis revealed 3 subgroups based on the patterns of abnormalities. Patients in each subgroup versus healthy controls showed a stepwise pattern of white-matter alterations as follows: subgroup 1(25.9% of patient sample),widespread white-matter disruption;subgroup 2(43.1% of patient sample), intermediate and more localized abnormalities in aspects of the corpus callosum and left cingulate;and subgroup 3(31.0% of patient sample),possible mild alterations, but no statistically significant tract disruption after controlling for family-wise error. The neurocognitive impairment in each subgroup accompanied the white-matter alterations: subgroup 1, deficits in sustained attention and delayed memory;subgroup 2, dysfunction in delayed memory;and subgroup 3, no significant deficits. Three subtypes of white-matter abnormality exist in individuals with major depression, those having widespread abnormalities suffering more neurocognitive impairments, which may provide evidence for parsing the heterogeneity of the disorder and help optimize typespecific treatment approaches. 展开更多
关键词 Major DEPRESSIVE DISORDER Hierarchal clustering Diffusion TENSOR imaging BIOTYPE HETEROGENEITY
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Neurocognitive Graphs of First-Episode Schizophrenia and Major Depression Based on Cognitive Features 被引量:8
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作者 Sugai Liang Roberto Vega +8 位作者 Xiangzhen Kong Wei Deng Qiang Wang Xiaohong Ma Mingli Li Xun Hu Andrew J.Greenshaw Russell Greiner Tao Li 《Neuroscience Bulletin》 SCIE CAS CSCD 2018年第2期312-320,共9页
Neurocognitive deficits are frequently observed in patients with schizophrenia and major depressive disorder(MDD). The relations between cognitive features may be represented by neurocognitive graphs based on cognitiv... Neurocognitive deficits are frequently observed in patients with schizophrenia and major depressive disorder(MDD). The relations between cognitive features may be represented by neurocognitive graphs based on cognitive features, modeled as Gaussian Markov random fields. However, it is unclear whether it is possible to differentiate between phenotypic patterns associated with the differential diagnosis of schizophrenia and depression using this neurocognitive graph approach. In this study, we enrolled 215 first-episode patients with schizophrenia(FES), 125 with MDD, and 237 demographically-matched healthy controls(HCs). The cognitive performance of all participants was evaluated using a battery of neurocognitive tests. The graphical LASSO model was trained with aone-vs-one scenario to learn the conditional independent structure of neurocognitive features of each group. Participants in the holdout dataset were classified into different groups with the highest likelihood. A partial correlation matrix was transformed from the graphical model to further explore the neurocognitive graph for each group. The classification approach identified the diagnostic class for individuals with an average accuracy of 73.41% for FES vs HC, 67.07% for MDD vs HC, and 59.48% for FES vs MDD. Both of the neurocognitive graphs for FES and MDD had more connections and higher node centrality than those for HC. The neurocognitive graph for FES was less sparse and had more connections than that for MDD.Thus, neurocognitive graphs based on cognitive features are promising for describing endophenotypes that may discriminate schizophrenia from depression. 展开更多
关键词 SCHIZOPHRENIA Major depressive disorder NEUROCOGNITION Neurocognitive graph Graphical LASSO
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