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Integration of transcriptome and metabolome reveals regulatory mechanisms of volatile flavor formation during tomato fruit ripening 被引量:1
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作者 Zhiqiang Liu Jianxin Wu +5 位作者 Licai Wang Xiaonan Lu Golam Jalal Ahammed Xiaolan Zhang Xia Cui Haijing Wang 《Horticultural Plant Journal》 2025年第2期680-692,共13页
Tomato is an important economic crop all over the world.Volatile flavors in tomato fruit are key factors influencing consumer liking and commercial quality.However,the regulatory mechanism controlling the volatile fla... Tomato is an important economic crop all over the world.Volatile flavors in tomato fruit are key factors influencing consumer liking and commercial quality.However,the regulatory mechanism controlling the volatile flavors of tomatoes is still not clear.Here,we integrated the metabolome and transcriptome of the volatile flavors in tomato fruit to explore the regulatory mechanism of volatile flavor formation,using wild and cultivated tomatoes with significant differences in flavors.A total of 35 volatile flavor compounds were identified,based on the solid phase microextraction-gas chromatography-mass spectrometry(SPME-GC-MS).The content of the volatiles,affecting fruit flavor,significantly increased in the transition from breaker to red ripe fruit stage.Moreover,the total content of the volatiles in wild tomatoes was much higher than that in the cultivated tomatoes.The content variations of all volatile flavors were clustered into 10 groups by hierarchical cluster and Pearson coefficient correlation(PCC)analysis.The fruit transcriptome was also patterned into 10 groups,with significant variations both from the mature green to breaker fruit stage and from the breaker to red ripe fruit stage.Combining the metabolome and the transcriptome of the same developmental stage of fruits by co-expression analysis,we found that the expression level of 1182 genes was highly correlated with the content of volatile flavor compounds,thereby constructing two regulatory pathways of important volatile flavors.One pathway is tetrahydrothiazolidine N-hydroxylase(SlTNH1)-dependent,which is regulated by two transcription factors(TFs)from the bHLH and AP2/ERF families,controlling the synthesis of 2-isobutylthiazole in amino acid metabolism.The other is lipoxygenase(Sl LOX)-dependent,which is regulated by one TF from the HD-Zip family,controlling the synthesis of hexanal and(Z)-2-heptenal in fatty acid metabolism.Dual-luciferase assay confirmed the binding of b HLH and AP2/ERF to their structural genes.The findings of this study provide new insights into volatile flavor formation in tomato fruit,which can be useful for tomato flavor improvement. 展开更多
关键词 TOMATO Volatile flavor TRANSCRIPTOME Transcription factor CO-EXPRESSION
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Mapping and identification of QTLs for seed fatty acids in soybean(Glycine max L.) 被引量:1
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作者 Yiwang Zhong Xingang Li +8 位作者 Shasha Wang Sansan Li Yuhong Zeng Yanbo Cheng Qibin Ma Yanyan Wang Yuanting Pang Hai Nian Ke Wen 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2024年第12期3966-3982,共17页
Soybean is one of the most important sources of vegetable oil.The oil content and fatty acid ratio have attracted significant attention due to their impacts on the shelf-life of soybean oil products and consumer healt... Soybean is one of the most important sources of vegetable oil.The oil content and fatty acid ratio have attracted significant attention due to their impacts on the shelf-life of soybean oil products and consumer health.In this study,a high-density genetic map derived from Guizao 1 and Brazil 13 was used to analyze the quantitative trait loci of palmitic acid(PA),stearic acid(SA),oleic acid(OA),linoleic acid(LA),linolenic acid(LNA),and oil content(OC).A total of 54 stable QTLs were detected in the genetic map linkage analysis,which shared six bin intervals.Among them,the bin interval on chromosome 13(bin106-bin118 and bin123-bin125)was found to include stable QTLs in multiple environments that were linked to OA,LA,and LNA.Eight differentially expressed genes(DEGs)within these QTL intervals were determined as candidate genes according to the combination of parental resequencing,bioinformatics and RNA sequencing data.All these results are conducive to breeding soybean with the ideal fatty acid ratio for food,and provide the genetic basis for mining genes related to the fatty acid and oil content traits in soybean. 展开更多
关键词 SOYBEAN OIL fatty acids QTL GENE
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Optimizing Nitrogen Rate and Biostimulant Application to Improve Onion(Allium cepa L.)Yield and Nutrient Use Efficiency
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作者 Dorde Vojnovic Robert Pokluda +4 位作者 Ivana Maksimovic Janko Cervenski Sonja Ilin Boris Adamovic Jelena Popovic-Dordevic 《Phyton-International Journal of Experimental Botany》 2025年第7期1997-2013,共17页
Onion(Alliumcepa L.)is a widely cultivated vegetable valued for its taste,aroma,and nutritional content.Biostimulants(BTs)are substances that stimulate plant growth and development.This study explores the impact of BT... Onion(Alliumcepa L.)is a widely cultivated vegetable valued for its taste,aroma,and nutritional content.Biostimulants(BTs)are substances that stimulate plant growth and development.This study explores the impact of BTs and nitrogen(N)fertilization on the yield and nutrient use efficiency of directly seeded onions,addressing the challenges of excessive N application and promoting sustainable practices.A two-year field experiment was conducted using a split-plot design with three replications.Treatments included a control(C),a seaweed extract-based BT(T1),humic and fulvic acids(T2),and Trichoderma spp.(T3).N rates applied were 64 kg N/ha(N1),100 kg N/ha(N2),150 kg N/ha as the standard(NS),and 200 kg N/ha(N3).Compared to the C×NS treatment,T1×N1 increased yield by 7.6%with a saving of 50 kgN/ha;T2×N3 increased yield by 19.4%;and T3×N1 increased yield by 11.7%with a saving of 86 kgN/ha.The T2 treatment reducedNuptake under excessiveNrate(T2×N3),indicating a potential protective effect against stress induced by high N levels.Treatment with T1 improved nutrient use efficiency(NUtE,PUtE,KUtE)and partial factor productivity(PFP)under reduced N conditions(T1×N1).The study advises farmers to apply T3 under reducedNrates(N1 andN2)to improve yield and highlights that all three BTs enhance nutrient use efficiency,providing promising strategies to boost onion productivity while minimizing nutrient losses in direct seeding cultivation. 展开更多
关键词 Plant nutrition PHOSPHORUS POTASSIUM sustainability SEAWEED TRICHODERMA
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A PHYB-PIF4-auxin module promotes tomato graft formation in response to elevated ambient temperature
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作者 Xianmin Meng Feng Zhang +1 位作者 Wencai Yang Qingmao Shang 《Horticultural Plant Journal》 2025年第1期227-238,共12页
Grafting is an effective technique for increasing the resistance of vegetables to biotic and abiotic stresses.It has been widely applied to produce solanaceous and melon vegetables.Temperature is an important external... Grafting is an effective technique for increasing the resistance of vegetables to biotic and abiotic stresses.It has been widely applied to produce solanaceous and melon vegetables.Temperature is an important external factor affecting graft formation.However,the molecular mechanism by which external ambient temperature affects tomato graft formation remains unclear.In this study,we demonstrated that elevating ambient temperature during grafting to 35℃ for more than 24 h after grafting accelerated vascular reconnection.We generated self-or heterografted combinations between phyB1B2 and pif4 loss-of-function mutant and wild-type plants,and were mutants unresponsive to graft formation at elevated ambient temperature.In addition,elevated ambient temperature induced SlPIF4 expression during grafting.SlPIF4 directly binds the promoters of auxin biosynthesis genes SlYUCCAs and activates their expression.Further investigation revealed auxin accumulation in the graft junction under elevated ambient temperature.The results illuminate the mechanism by which the PHYB-PIF4-auxin module promotes tomato graft formation in response to elevated ambient temperature. 展开更多
关键词 Graft formation TOMATO Temperature Vascular AUXIN
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Developmental Characteristics and Cinnamic Acid Resistance of Root Border Cells in Cucumber and Figleaf Gourd Seedlings 被引量:13
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作者 QIAO Yong-xu ZHANG Yong-ping +2 位作者 ZHANG Hong-xin TIAN Yong-qiang GAO Li-hong 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2013年第11期2065-2073,共9页
Root border cells (RBCs) originate from the root tip epidermis and surround the root apices. In this study, we evaluated the developmental characteristics and the roles of RBCs in protection of root apices of cucumb... Root border cells (RBCs) originate from the root tip epidermis and surround the root apices. In this study, we evaluated the developmental characteristics and the roles of RBCs in protection of root apices of cucumber and ifgleaf gourd seedlings from CA toxicity. The formation of RBCs and the emergence of the root tip occurred almost simultaneously in root apices of cucumber and ifgleaf gourd seedlings. CA ranging from 0 to 0.25 mol L-1 inhibited root elongation and decreased root cell viability in the root tip, moreover the inhibitory effects of CA were more signiifcant in the CA-sensitive cucumber than in the CA-tolerant ifgleaf gourd. Removal of RBCs from root tips led to more severe CA induced inhibition of root elongation and decline in root cell viability. Increasing CA levels and treatment time decreased the relative viability of attached and detached RBCs. CA also induced a thicker mucilage layer surrounding attached RBCs of both species. Additionally, a signiifcantly higher relative cell viability of attached RBCs and thicker mucilage layers were observed in ifgleaf gourd. These results suggest that RBCs play an important role in protecting root tips from CA toxicity. 展开更多
关键词 cinnamon acid AUTOTOXICITY root border cells cell viability
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Natural Variation of Pto and Fen Genes and Marker-Assisted Selection for Resistance to Bacterial Speck in Tomato 被引量:3
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作者 SUN Wan-yu ZHAO Wan-ying WANG Yuan-yuan PEI Cheng-cheng YANG Wen-cai 《Agricultural Sciences in China》 CAS CSCD 2011年第6期827-837,共11页
The resistance in tomato plants to bacterial speck caused by Pseudomonas syringae pv. tomato is triggered by the interactions between the plant resistance protein Pto and the pathogen avirulence proteins AvrPto or Avr... The resistance in tomato plants to bacterial speck caused by Pseudomonas syringae pv. tomato is triggered by the interactions between the plant resistance protein Pto and the pathogen avirulence proteins AvrPto or AvrPtoB. Fen is a gene encoding closely related functional protein kinases as the Pto gene. To investigate the status of resistance to the pathogen and natural variation of Pto and Fen genes in tomato, 67 lines including 29 growing in China were subject to disease resistance evaluation and fenthion-sensitivity test. Alleles of Pto and Fen were amplified from genomic DNA of 25 tomato lines using polymerase chain reaction (PCR) and sequences were determined by sequencing the PCR products. The results indicated that none of the 29 cultivars/hybrids growing in China were resistant to bacterial speck race 0 strain DC3000. Seven of eight tomato lines resistant to DC3000 were also fenthion-sensitive. Analysis of deduced amino acid sequences identified three novel residue substitutions between Pto and pto, and one new substitution identified between Fen and fen. A PCR-based marker was developed and successfully used to select plants with resistance to DC3000. 展开更多
关键词 TOMATO bacterial speck PTO FEN natural variation marker-assisted selection
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Foliar spraying of aqueous garlic bulb extract stimulates growth and antioxidant enzyme activity in eggplant(Solanum melongena L.) 被引量:1
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作者 Muhammad Ali CHENG Zhi-hui +3 位作者 Sikandar Hayat Husain Ahmad Muhammad Imran Ghani LIU Tao 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2019年第5期1001-1013,共13页
Recently,botanical extracts are gaining popularity as biostimulants in vegetable production.In present study,the effect of aqueous garlic bulb extract(AGE)was studied on the growth and physiology of eggplant grown in ... Recently,botanical extracts are gaining popularity as biostimulants in vegetable production.In present study,the effect of aqueous garlic bulb extract(AGE)was studied on the growth and physiology of eggplant grown in plastic tunnel.AGE was foliage sprayed with various frequencies,i.e.,0,S1(once),S2(twice)and S3(three times)at two independent growth stages,pre-and post-transplant.The results showed that the treated plants exhibited stimulatory responses in growth and physiology in accord with the repetition of AGE spray and growth stages of the plants,respectively.A single foliage sprayed pre-transplant resulted in improved growth,i.e.,plant morphology and biomass,and enhanced antioxidants enzymes(superoxide dismutase,SOD;peroxidase,POD),photosynthesis and chlorophyll abundance observed at vegetative,first flowering and fruit setting stages,respectively.However,thrice application inhibited the plant growth and development and resulted in lipid peroxidation,i.e.,increased malondialdehyde(MDA)content.In addition,the post-transplant application also showed growth stimulation and interestingly,an overall positive influence was observed with respect to the AGE application and no significant increase in the MDA content indicated the post-transplant seedlings responded well.Our findings demonstrate that AGE can act as a biostimulant to enhance the eggplant growth in plastic tunnel production. 展开更多
关键词 AQUEOUS GARLIC bulb EXTRACT biostimulants plant GROWTH MALONDIALDEHYDE Solanum melongena L.
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Effect of Diazotrophs and Chemical Fertilizers on Production and Economics of Okra (<i>Abelmoschus esculentus</i>, L.) Cultivars 被引量:3
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作者 Barnali Mal Premananda Mahapatra Santanu Mohanty 《American Journal of Plant Sciences》 2014年第1期168-174,共7页
The effect of diazotrophs and chemical fertilizers on yield attributing characters and economics of okra cultivation was evaluated. Application of highest dose of NPK @100% in combination with vermicompost (5 t ha-1) ... The effect of diazotrophs and chemical fertilizers on yield attributing characters and economics of okra cultivation was evaluated. Application of highest dose of NPK @100% in combination with vermicompost (5 t ha-1) and biofertilizers with FYM increased the fruit yield of okra (cultivar Mahyco-10) considerably with yield varying between 80.00 q ha-1 to 227.13 q ha-1 and 80.49 q ha-1 to 229.62 q ha-1 during 2010 and 2011 respectively. In okra cv. Utkal Gaurav the fruit yield varied from 47.68 q ha-1 to 129.84 q ha-1 in 2010 and 47.27 q ha-1 to 131.35 q ha-1 in 2011. As regards the net return, highest net profit of Rs 87,630 and Rs. 89,370 ha-1 from the okra was realized over an investment of Rs. 71,360 ha-1 during both the years with a benefit cost ratio of 2.23 and 2.25 when 100% NPK integrated with vermicompost @5t ha-1 and biofertilizers with FYM applied in okra cv.Mahyco-10. The highest net return of Rs. 14,350 in 2010 and Rs. 15,260 in 2011 with an investment of Rs. 63,550 each year was found in cultivar Utkal Gaurav under highest level of nutrient application. 展开更多
关键词 Bio-Fertilizers VERMICOMPOST DIAZOTROPHS OKRA
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Time-course transcriptome landscape of achene development in lettuce 被引量:1
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作者 Chen Luo Shenglin Wang +5 位作者 Kang Ning Zijing Chen Jingjing Yang Yixin Wang Meixia Qi Qian Wang 《Horticultural Plant Journal》 SCIE CSCD 2022年第1期99-109,共11页
Lettuce(Lactuca sativa L.),which belongs to the large Asteraceae(Compositae)family,breeds by sexual reproduction and produces seeds.Actually,lettuce seeds are achenes,which are defined as fruits.However,few studies ha... Lettuce(Lactuca sativa L.),which belongs to the large Asteraceae(Compositae)family,breeds by sexual reproduction and produces seeds.Actually,lettuce seeds are achenes,which are defined as fruits.However,few studies have described the morphological characteristics of the lettuce achenes,and genes essential for achene development are largely unknown in lettuce.To investigate the gene activity during achene development and determine the possible mechanisms that influence achene development in lettuce,we performed a time-course transcriptome analysis of lettuce achenes.A total of 27,390 expressed genes were detected at the five achene development stages.We investigated the gene expression patterns during achene development and identified the enriched biological processes at the corresponding stages.Kyoto Encyclopedia of Genes and Genomes and Gene Ontology analyses revealed a variety of transcriptomic similarities and differences at different achene development stages.Further,transcription factors and phytohormones were found to play important roles during achene development.Finally,we proposed a working model to illustrate the gene expression modules and possible molecular mechanisms underlying achene development.Our time-course transcriptome data also provide a foundation for future functional studies to reveal the genetic control of achene development in lettuce. 展开更多
关键词 LETTUCE Achene development TRANSCRIPTOME Fruit Seed Transcription factor
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Expression Analysis of Restorer Alleles-Induced Genes in Pepper 被引量:1
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作者 GUO Shuang MA Ning +2 位作者 YANG Wen-cai SUN Yu-jie SHEN Huo-lin 《Agricultural Sciences in China》 CAS CSCD 2011年第7期1010-1015,共6页
Fertility restoration of cytoplasmic male-sterility in pepper (Capsicum annuum L.) is useful for commercial production of hybrid seeds. However, the mechanism of fertility restoration has not been determined. We pre... Fertility restoration of cytoplasmic male-sterility in pepper (Capsicum annuum L.) is useful for commercial production of hybrid seeds. However, the mechanism of fertility restoration has not been determined. We previously constructed a cDNA library and identified some genes related to fertility restoration in pepper using suppression subtractive hybridization technology. In this study, the expression patterns of 20 genes were investigated using semi-quantitative RT-PCR. Three genes expressed only in restorer lines, but not in sterility lines. Four genes expressed only in anther, but not in other organs. Among these 7 genes, the clone TG31 was observed to specifically express in anther of restorer lines. The work described here provides a comprehensive overview on the expression pattern of the genes that are induced by restorer alleles in pepper. It will also contribute to the current understanding of molecular networks for the regulation of fertility restoration. 展开更多
关键词 PEPPER restorer alleles semi-quantitative RT-PCR EXPRESSION
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Loss of CsPOD7 triggers ROS-induced metabolic collapse and male sterility in cucumber
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作者 Sen Li Yuming Dong +11 位作者 Xi Zhao Li Shan Lin Yang Menghang An Tiantian Pei Muhammad Ahmad Yifan Xu Yibing Zhao Hao Xue Xinyue Ma Xingwang Liu Huazhong Ren 《Horticultural Plant Journal》 2025年第6期2292-2296,共5页
Male sterile lines serve as a pivotal tool in plant breeding,offering an effective strategy for developing hybrid cultivars.In cucumber(Cucumis sativus L.),the creation of male sterile lines,most of which exhibit abno... Male sterile lines serve as a pivotal tool in plant breeding,offering an effective strategy for developing hybrid cultivars.In cucumber(Cucumis sativus L.),the creation of male sterile lines,most of which exhibit abnormal pollen development,is essential for harnessing heterosis.Accumulating evidence suggests that male sterility in plants is linked to the overaccumulation of Reactive Oxygen Species(ROS),which causes oxidative damage to biomolecules and cellular structures,ultimately leading to aberrant anther development(Li et al.,2004). 展开更多
关键词 creation male sterile linesmost abnormal pollen developmentis male sterility reactive oxygen species ros which cspod harnessing heterosisaccumulating male sterile lines developing hybrid cultivarsin
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WUSCHEL-related homeobox1(WOX1)regulates vein patterning and leaf size in Cucumis sativus 被引量:11
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作者 Hu Wang Huanhuan Niu +5 位作者 Chuang Li Guoyan Shen Xiaofeng Liu Yiqun Weng Tao Wu Zheng Li 《Horticulture Research》 SCIE 2020年第1期434-448,共15页
In plants,WUSCHEL-related homeobox1(WOX1)homologs promote lamina mediolateral outgrowth.However,the downstream components linking WOX1 and lamina development remain unclear.In this study,we revealed the roles of WOX1 ... In plants,WUSCHEL-related homeobox1(WOX1)homologs promote lamina mediolateral outgrowth.However,the downstream components linking WOX1 and lamina development remain unclear.In this study,we revealed the roles of WOX1 in palmate leaf expansion in cucumber(Cucumis sativus).A cucumber mango fruit(mf)mutant,resulting from truncation of a WOX1-type protein(CsWOX1),displayed abnormal lamina growth and defects in the development of secondary and smaller veins.CsWOX1 was expressed in the middle mesophyll and leaf margins and rescued defects of the Arabidopsis wox1 prs double mutant.Transcriptomic analysis revealed that genes involved in auxin polar transport and auxin response were highly associated with leaf development.Analysis of the cucumber mf rl(round leaf)double mutant revealed that CsWOX1 functioned in vein development via PINOID(CsPID1)-controlled auxin transport.Overexpression of CsWOX1 in cucumber(CsWOX1-OE)affected vein patterning and produced‘butterfly-shaped’leaves.CsWOX1 physically interacted with CsTCP4a,which may account for the abnormal lamina development in the mf mutant line and the smaller leaves in the CsWOX1-OE plants.Our findings demonstrated that CsWOX1 regulates cucumber leaf vein development by modulating auxin polar transport;moreover,CsWOX1 regulates leaf size by controlling CIN-TCP genes. 展开更多
关键词 SIZE WUS SHAPED
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Sources for Heat-Stable Resistance to Southern Root-Knot Nematode (Meloidogyne incognita) in Solanum lycopersicum 被引量:5
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作者 WU Wen-wen SHEN Huo-lin YANG Wen-cai 《Agricultural Sciences in China》 CAS CSCD 2009年第6期697-702,共6页
Southern root-knot nematode (Meloidogyne incognita) is a major problem in vegetable production in China due to the expansion of plastic tunnel and solar greenhouse. Using resistant cultivars is an effective approach... Southern root-knot nematode (Meloidogyne incognita) is a major problem in vegetable production in China due to the expansion of plastic tunnel and solar greenhouse. Using resistant cultivars is an effective approach to control the disease. Nine genes, Mi-1 to Mi-9, have been reported and only Mi-1 has been successfully used in tomato breeding. However, Mi-1 is inactive at a temperature above 28~C. In order to identify sources for heat-stable resistance to southern root-knot nematode, 53 genotypes of tomato (Solarium spp.) were inoculated with an isolate of M. incognita in the growth chamber at 28 or 32℃ for initial screening. 28 lines had less than 25 galls and were considered as resistant candidates. The top 60% (16 in total) of resistant candidates obtained from each temperature were subject to re-evaluation at 32~C using the same nematode isolate. Three lines ZN17, ZN 48, and LA0385 showed heat-stable resistance with an average of 10 galls or less per plant. LA0385 is a wild species, while ZNI7 and ZN48 are elite breeding lines. These lines were grown in a greenhouse for two seasons, and also showed high resistance with less than 10 galls per plant. Thus they were considered as good sources for breeding resistance to southern root-knot nematode in tomato. 展开更多
关键词 heat-stable resistance Meloidogyne incognita TOMATO
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Tomato SlPUB24 enhances resistance to Xanthomonas euvesicatoria pv. perforans race T3 被引量:5
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作者 Xin Liu Ge Meng +3 位作者 Mengrui Wang Zilin Qian Yaxian Zhang Wencai Yang 《Horticulture Research》 SCIE 2021年第1期434-451,共18页
Solanum lycopersicum var.cerasiforme accession PI 114490 has broad-spectrum resistance to bacterial spot caused by several species of Xanthomonas.Resistance is quantitatively inherited,and a common quantitative trait ... Solanum lycopersicum var.cerasiforme accession PI 114490 has broad-spectrum resistance to bacterial spot caused by several species of Xanthomonas.Resistance is quantitatively inherited,and a common quantitative trait locus QTL-11B on chromosome 11 has been identified previously.In this study,the SlPub24 gene was characterized in QTL-11B.SlPub24 in PI 114490 was upregulated by infection with X.euvesicatoria pv.perforans race T3,but its transcription was low in the susceptible line OH 88119 whether or not it was infected by the pathogen.The differential expression of SlPub24 between PI 114490 and OH 88119 was due to great sequence variation in the promoter region.The promoter of SlPub24 in OH 88119 had very low activity and did not respond to pathogen infection.Transgenic lines of OH 88119 overexpressing SlPub24 isolated from PI 114490 showed significantly enhanced resistance,while mutants of Slpub24 generated by CRISPR/Cas9 editing showed more susceptibility to race T3 and to other races.The mutants also showed spontaneous cell death in leaves.The expression of the salicylic acid(SA)pathway gene phenylalanine ammonia-lyase(PAL)and signaling-related genes pathogenesis-related(PR1)and nonexpresser of PR1(NPR1)were influenced by SlPub24.The content of SA in tomato plants was consistent with the level of SlPub24 expression.Furthermore,SlPUB24 interacted with the cell wall protein SlCWP and could regulate the degradation of SlCWP.The expression levels of SlCWP and SlCWINV1,a cell wall invertase gene,showed opposite patterns during pathogen infection.The activity of SlCWINV1 was lower in mutants than in PI 114490.The results are discussed in terms of the roles of the abovementioned genes,and a potential model for SlPUB24-mediated resistance to bacterial spot is proposed. 展开更多
关键词 CRISPR/Cas9 RESISTANCE mentioned
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CsTRM5 regulates fruit shape via mediating cell division direction and cell expansion in cucumber 被引量:4
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作者 Yang Xie Xiaofeng Liu +10 位作者 Chengzhen Sun Xiaofei Song Xiaoli Li Haonan Cui Jingyu Guo Liu Liu Ao Ying Zeqin Zhang Xueyun Zhu Liying Yan Xiaolan Zhang 《Horticulture Research》 SCIE CSCD 2023年第3期151-163,共13页
Fruit shape and size are important appearance and yield traits in cucumber,but the underlying genes and their regulatory mechanisms remain poorly understood.Here we identified a mutant with spherical fruits from an Et... Fruit shape and size are important appearance and yield traits in cucumber,but the underlying genes and their regulatory mechanisms remain poorly understood.Here we identified a mutant with spherical fruits from an Ethyl Methane Sulfonate(EMS)-mutagenized library,named the qiu mutant.Compared with the cylindrical fruit shape in 32X(wild type),the fruit shape in qiu was round due to reduced fruit length and increased fruit diameter.MutMap analysis narrowed the candidate gene in the 6.47 MB range on Chr2,harboring the FS2.1 locus reported previously.A single-nucleotide polymorphism(SNP)(11359603)causing a truncated protein of CsaV3_2G013800,the homolog of tomato fruit shape gene SlTRM5,may underlie the fruit shape variation in the qiu mutant.Knockout of CsTRM5 by the CRISPR-Cas9 system confirmed that CsaV3_2G013800/CsTRM5 was the causal gene responsible for qiu.Sectioning analysis showed that the spherical fruit in qiu resulted mainly from increased and reduced cell division along the transverse and longitudinal directions,respectively.Meanwhile,the repressed cell expansion contributed to the decreased fruit length in qiu.Transcriptome profiling showed that the expression levels of cell-wall-related genes and abscisic acid(ABA)pathway genes were significantly upregulated in qiu.Hormone measurements indicated that ABA content was greatly increased in the qiu mutant.Exogenous ABA application reduced fruit elongation by inhibiting cell expansion in cucumber.Taken together,these data suggest that CsTRM5 regulates fruit shape by affecting cell division direction and cell expansion,and that ABA participates in the CsTRM5-mediated cell expansion during fruit elongation in cucumber. 展开更多
关键词 EXPANSION SHAPE MEDIA
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LsAP2 regulates leaf morphology by inhibiting CIN-like TCP transcription factors and repressing LsKAN2 in lettuce 被引量:2
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作者 Chen Luo Shenglin Wang +4 位作者 Kang Ning Zijing Chen Yixin Wang Jingjing Yang Qian Wang 《Horticulture Research》 SCIE 2021年第1期2600-2614,共15页
Leaf size and flatness directly affect photosynthesis and are closely related to agricultural yield.The final leaf size and shape are coordinately determined by cell proliferation,differentiation,and expansion during ... Leaf size and flatness directly affect photosynthesis and are closely related to agricultural yield.The final leaf size and shape are coordinately determined by cell proliferation,differentiation,and expansion during leaf development.Lettuce(Lactuca sativa L.)is one of the most important leafy vegetables worldwide,and lettuce leaves vary in shape and size.However,the molecular mechanisms of leaf development in lettuce are largely unknown.In this study,we showed that the lettuce APETALA2(LsAP2)gene regulates leaf morphology.LsAP2 encodes a transcriptional repressor that contains the conserved EAR motif,which mediates interactions with the TOPLESS/TOPLESS-RELATED(JPL/TPR)corepressors.Overexpression of LsAP2 led to small and crinkly leaves,and many bulges were seen on the surface of the leaf blade.LsAP2 physically interacted with the CINCINNATA(CIN)-like TEOSINTE BRANCHED1/CYCLOIDEA/PROLIFERATING CELL FACTOR(TCP)transcription factors and inhibited their transcriptional activation activity.RNA sequencing analysis showed that LsAP2 affected the expression of auxin-and polarity-related genes.In addition,LsAP2 directly repressed the abaxial identity gene KANAD12(LsKAN2).Together,these results indicate that LsAP2 regulates leaf morphology by inhibiting CIN-like TCP transcription factors and repressing LsKAN2,and our work provides insights into the regulatory mechanisms of leaf development in lettuce. 展开更多
关键词 INHIBITING inhibited TOGETHER
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辣椒雄性不育分子生物学研究进展 被引量:1
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作者 Salesh Kumar Jindal Major Singh Dhaliwal +2 位作者 Om Prakash Meena 戴雄泽 张西露(译) 《辣椒杂志》 2020年第1期28-50,共23页
遗传定位、基因标记与克隆、标记辅助选择(MAS)等分子生物学技术在作物品种改良中发挥了重要作用。近年来,辣椒分子生物学研究取得了一定进展:(1)构建了一批分布广泛、覆盖整个基因组的种间或种内遗传图谱。(2)对C.annuum及其野生种C.an... 遗传定位、基因标记与克隆、标记辅助选择(MAS)等分子生物学技术在作物品种改良中发挥了重要作用。近年来,辣椒分子生物学研究取得了一定进展:(1)构建了一批分布广泛、覆盖整个基因组的种间或种内遗传图谱。(2)对C.annuum及其野生种C.annuum var.glabriusculum和C.baccatum的全基因组进行测序,明确了辣椒基因组的大小(3.48 Gb)为番茄(Solanum lycopersicum L.)基因组(900 Mb)的4倍。(3)开发了一批连锁标记,奠定了利用基因克隆和MAS技术培育优良品种的基础。(4)发现20个独立遗传的核雄性不育(NMS)基因,开发了与ms1、ms3、ms8、ms10、msk、msc-1和一个未命名基因的连锁标记,但除ms1、ms3、ms8和ms10外,其他的NMS基因尚未定位。(5)开发了与辣椒胞质雄性不育系(CMS)不育性相关的线粒体基因atp6的标记,鉴定了与育性恢复(Rf)相关基因,但Rf没能在遗传图谱中定位;鉴定和标记了影响CMS系育性恢复的相关核基因(pr)。综述了辣椒分子生物学研究进展,这些信息将对辣椒种质资源评价、利用MAS培育NMS系和提高NMS系选育效率、利用rf和Rf基因选育CMS的保持系和恢复系,以及杂交种子纯度鉴定等具有一定参考价值。 展开更多
关键词 辣椒 胞质雄性不育 遗传图谱 分子标记 核雄性不育
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Antioxidant Defense System in Wheat (Triticum aestivum L.) Seedlings under Heat Stress and Revival Conditions 被引量:2
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作者 R. Mahla S. Madan +1 位作者 M. K. Rana R. Munjal 《Journal of Agricultural Science and Technology》 2011年第1期27-34,共8页
The present investigation was carried out to investigate the effect of heat stress and revival on some antioxidative enzymes and metabolites in leaves of the wheat (Triticum aestivum L.) seedlings of heat susceptib... The present investigation was carried out to investigate the effect of heat stress and revival on some antioxidative enzymes and metabolites in leaves of the wheat (Triticum aestivum L.) seedlings of heat susceptible (cv. WH 147 and HS 277) and heat tolerant (cv. WH 1021 and HW 2045) cultivars. Seven days old seedlings grown at 25 ℃ were exposed to 40 ℃ for 6 h and these seedlings were again brought to 25 ℃. The observations were recorded in the leaves of control, stressed and revived seedlings on 2nd and 4th day of revival. For the selection ofthermo-tolerant cultivars, screening of the thirty-six cultivars was done based on wilting of primary leaf and values of chlorophyll fluorescence. The MDA (malondialdehyde) and H2O2 concentration in leaves of wheat seedlings increased at the high temperature. There was enhancement in the activities of antioxidative enzymes, viz. CAT (catalase), POX (peroxidase), GR (glutathione reductase) and APX (ascorbate peroxidase) in leaves of the tolerant and susceptible cultivars under heat stress, however, higher percent increase was observed in tolerant cultivars. Heat stress increased the SOD (superoxide dismutase) activity in tolerant cultivars but activity declined in susceptible cultivars. On revival, the activities of the CAT, POX and GR declined in comparison to stressed seedlings but remained higher as compared to control. Ascorbate peroxidase activity remained higher on 2nd day and 4th day of revival in all the cultivars. 展开更多
关键词 WHEAT heat stress antioxidant enzymes Triticum aestivum
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Functional Characterization of the Promoter and Second Intron of CUM1 During Flower Development in Cucumber(Cucumis sativus L.) 被引量:9
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作者 GU Ran LIU Xiaofeng +4 位作者 ZHAO Wensheng YAN Shuangshuang SUN Linhan WU Binning ZHANG Xiaolan 《Horticultural Plant Journal》 SCIE 2018年第3期103-110,共8页
The characterization of flower specific promoter is critical during flower development by cucumber transformation technology.AGAMOUS(AG)is an organ identity gene that is required for carpel and stamen development in A... The characterization of flower specific promoter is critical during flower development by cucumber transformation technology.AGAMOUS(AG)is an organ identity gene that is required for carpel and stamen development in Arabidopsis.The promoter and second intron of AG contain multiple regulatory elements that confer proper spatial and temporal expression.Cucumber is an important vegetable with unisexual flowers.Cucumber MADS-box 1(CUM1)is the AG homolog in cucumber,belonging to the eu AG lineage along with AG.In situ hybridization showed that CUM1 was specifically expressed in the stamens and carpels of cucumber.GUS staining indicated that the second intron of CUM1 confers stamen-specific expression,while the promoter of CUM1 drives both stamen-and carpel-specific expression during the early stages of flower development,but is restricted to carpel-and connectivum-specific expression during the late stages of flower development.Furthermore,a yeast one-hybrid assay demonstrated that two auxin response factors(Cs ARF13 and Cs ARF17)had bound directly to the second intron of CUM1.Our data suggest that different regulatory circuits operate in AG homologs in plant species with distinct sex types. 展开更多
关键词 CUCUMBER CUM1 PROMOTER INTRON in situ hybridization GUS staining yeast one-hybrid
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Origin of the Domesticated Horticultural Species and Molecular Bases of Fruit Shape and Size Changes during the Domestication, Taking Tomato as an Example 被引量:5
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作者 SUN Liang CHEN Jie +1 位作者 XIAO Kai YANG Wencai 《Horticultural Plant Journal》 SCIE 2017年第3期125-132,共8页
Domestication of crop plants is the foundation of modern agriculture, which brings forth desirable changes in cultivated species that distinguish them from their wild relatives. This resulted in the origin of crop spe... Domestication of crop plants is the foundation of modern agriculture, which brings forth desirable changes in cultivated species that distinguish them from their wild relatives. This resulted in the origin of crop species at known geographical locations coinciding with the transition of human societies from hunter-gather to agrarian civilizations. Fruit size and shape are very important traits for horticulture industry, as well as for studying the domestication of the horticultural species. In this review, we have summarized the origin of some widely-grown horticultural crops and also the molecular bases of the fruit size and shape changes of the horticultural crops during the domestication, taking tomato as an example. 展开更多
关键词 horticultural crops DOMESTICATION fruit size fruit shape TOMATO
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