Disease-resistant genes play an important role in defending against a variety of pathogens and insect pests in plants. Most of the disease-resistant genes encode pro- teins with conserved leucine rich repeat and nucle...Disease-resistant genes play an important role in defending against a variety of pathogens and insect pests in plants. Most of the disease-resistant genes encode pro- teins with conserved leucine rich repeat and nucleotide binding site domains. In this study, we cloned and char- acterized gene-resistant analogs （RGAs） from Eucalyptus grandis using degenerate PCR, with primers specifically targeting these two domains. The amplified fragments were cloned into the pGEM-T vector and transformed into Escherichia coli. Among the 90 clones obtained, 13 were sequenced and compared with each other and with previ- ously identified gene-resistant diseases. A BLASTX search in GenBank revealed high similarities among the con- served domains of these cloned genes with RGA genes. Some clones, however, showed no significant similarity with DNA sequences in GenBank. Southern blotting ana- lysis identified several polymorphic RFLP loci between distinct genotypes. However, none of them co-segregated with the Puccinia psidii Winter resistance gene 1 （Ppr1） in a population study.展开更多
The global expansion of cultivation areas of Jatropha has contributed to the emergence of various diseases.Currently in Brazil,the occurrence of a new disease has been reported that not only reduces the productivity b...The global expansion of cultivation areas of Jatropha has contributed to the emergence of various diseases.Currently in Brazil,the occurrence of a new disease has been reported that not only reduces the productivity but also causes the death of Jatropha.This disease is associated with collar and root rot of plants.From morphological and phylogenetic studies(based on Internal Transcribed Spacers,β-tubulin and Translation Elongation Factor 1-αsequences),nine species of Botryosphaeriaceae were identified.These species include Lasiodiplodia egyptiacae,L.pseudotheobromae,L.theobromae,Macrophomina phaseolina,Neoscytalidium hyalinum and four Lasiodiplodia spp.that are proposed as new species(L.euphorbicola,L.jatrophicola,L.macrospora and L.subglobosa).All the species in this study,except M.phaseolina,are pathogenic.The results show that root rot of physic nut plants is caused by complex pathogens.This study provides new information for future studies of disease management,quarantine programs and,especially,the development of resistant varieties for collar and root rot disease in J.curcas.展开更多
Colletotrichum orbiculare causes anthracnose of Cucurbitaceae and is phylogenetically closely related to pathogens of several other herbaceous hosts belonging to the Asteraceae,Fabaceae and Malvaceae.Most of them are ...Colletotrichum orbiculare causes anthracnose of Cucurbitaceae and is phylogenetically closely related to pathogens of several other herbaceous hosts belonging to the Asteraceae,Fabaceae and Malvaceae.Most of them are known for their hemibiotrophic infection strategy and as destructive pathogens either of field crops or weeds.In order to study the phylogenetic relationships of these fungi,a multilocus analysis(ITS,GAPDH,CHS-1,HIS3,ACT,TUB2,GS)of 42 strains of C.orbiculare and related species was conducted.The analysis resulted in nine clades that confirmed the four species previously known as belonging to this species complex,C.lindemuthianum,C.malvarum,C.orbiculare and C.trifolii,and recognised four new species from weeds,namely C.bidentis,C.sidae,C.spinosum and C.tebeestii.The name C.orbiculare itself is widely used in plant pathology and science,but is invalid according to current nomenclatural rules.Therefore we described a new species with the same epithet and a type specimen that agrees with our current understanding of this species,and is linked to a living culture.Following the recent epitypification of C.lindemuthianum,we chose appropriate specimens with associated strains to serve as epitypes of C.malvarum and C.trifolii,and selected an authentic specimen of C.trifolii as lectotype.展开更多
This article is the 17th in the Fungal Diversity Notes series which allows the researchers to publish fungal collections with updated reports of fungus-host and fungus-geography.Herein we report 97 taxa with four new ...This article is the 17th in the Fungal Diversity Notes series which allows the researchers to publish fungal collections with updated reports of fungus-host and fungus-geography.Herein we report 97 taxa with four new genera distributed in three phyla(Ascomycota,Glomeromycota and Mucoromycota),11 classes,38 orders and 62 families collected from various regions worldwide.This collection is further classified into taxa from 69 genera with four novel genera namely Jinshana,Lithophyllospora,Parapolyplosphaeria and Stegonsporiicola.Furthermore,71 new species,21 new records,one new combination and four novel phylogenetic placements are provided.The new species comprise Acrocalymma estuarinum,Aggregatorygma isidiatum,Alleppeysporonites elsikii,Amphibambusa aquatica,Apiospora hongheensis,Arthrobotrys tachengensis,Calonectria potisiana,Collariella hongheensis,Colletotrichum squamosae,Corynespora chengduensis,Diaporthe beijingensis,Dicellaesporites plicatus,Dicellaesporites verrucatus,Dictyoarthrinium endophyticum,Distoseptispora chiangraiensis,Dothiora eucalypti,Epicoccum indicum,Exesisporites chandrae,Fitzroyomyces pseudopandanicola,Fomitiporia exigua,Fomitiporia rondonii,Fulvifomes subthailandicus,Gigaspora siqueirae,Gymnopus ailaoensis,Hyalorbilia yunnanensis,Hygrocybe minimiholatra,H.mitsinjoensis,H.parviholatra,H.solis,H.vintsy,Helicogermslita kunmingensis,Jinshana tangtangiae,Kirschsteiniothelia dujuanhuensis,Lamproderma subcristatum,Leucoagaricus madagascarensis,Leucocoprinus mantadiaensis,Lithophyllospora australis,Marasmius qujingensis,Melomastia aquilariae,Monoporisporites jansoniusii,M.pattersonii,Monoporisporites valdiyae,Mucispora maesotensis,Mucor soli,Muyocopron yunnanensis,Nigrospora tomentosae,Ocellularia psorirregularis,Ophiocordyceps duyunensis,Oxneriaria nigrodisca,Oxydothis aquatica,O.filiforme,Phacidiella xishuangbannaensis,Phlebiopsis subgriseofuscescens,Pleurothecium takense,Pleurotus tuber-regium,Pseudochaetosphaeronema puerensis,Pseudodactylaria guttulate,Racheliella chinensis,Rhexoacrodictys fangensis,Roussoella neoaquatica,Rubroboletus pruinosus,Sanghuangporus subzonatus,Scytalidium assmuthi,Shrungabeeja kudremukhensis,Spirographa skorinae,Stanjehughesia bambusicola,Stegonsporiicola aurantiaca,Umbelopsis hingganensis,Vararia tenuata,Verruconis pakchongensis,Wongia bandungensis,and Zygosporium cymodoceae.The new combination is Parapolyplosphaeria thailandica(≡Polyplosphaeria thailandica).The 21 new hosts,geographical and habitat records comprise Acrocalymma fici,Apiculospora spartii,Aspergillus subramanianii,Camposporium ramosum,Clonostachys rogersoniana,Colletotrichum brevisporum,C.plurivorum,Collybiopsis gibbosa,Dictyosporium tratense,Distoseptispora adscendens,Exosporium livistonae,Ganoderma gibbosum,Graphis mikuraensis,Gymnosporangium paraphysatum,Lasiodiplodia thailandica,Moesziomyces bullatus,Penicillium cremeogriseum,P.echinulonalgiovense,P.javanicum,P.lanosocoeruleum,P.polonicum,and Pleurotus tuber-regium.Graphis chlorotica,G.panhalensis and G.parilis are given as novel phylogenetic placements.In addition,we provide the morphology of Tarzetta tibetensis which was missing in the previous Fungal Diversity Notes 1611–1716.Identification of characterization of all these taxa are supported by morphological and multigene phylogenetic analyses.展开更多
This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomyc...This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomycetes.We also introduce the new ascomycete genera Acericola,Castellaniomyces,Dictyosporina and Longitudinalis and new species Acericola italica,Alternariaster trigonosporus,Amarenomyces dactylidis,Angustimassarina coryli,Astrocystis bambusicola,Castellaniomyces rosae,Chaetothyrina artocarpi,Chlamydotubeufia krabiensis,Colletotrichum lauri,Collodiscula chiangraiensis,Curvularia palmicola,Cytospora mali-sylvestris,Dictyocheirospora cheirospora,Dictyosporina ferruginea,Dothiora coronillae,Dothiora spartii,Dyfrolomyces phetchaburiensis,Epicoccum cedri,Epicoccum pruni,Fasciatispora calami,Fuscostagonospora cytisi,Grandibotrys hyalinus,Hermatomyces nabanheensis,Hongkongmyces thailandica,Hysterium rhizophorae,Jahnula guttulaspora,Kirschsteiniothelia rostrata,Koorchalomella salmonispora,Longitudinalis nabanheensis,Lophium zalerioides,Magnibotryascoma mali,Meliola clerodendri-infortunati,Microthyrium chinense,Neodidymelliopsis moricola,Neophaeocryptopus spartii,Nigrograna thymi,Ophiocordyceps cossidarum,Ophiocordyceps issidarum,Ophiosimulans plantaginis,Otidea pruinosa,Otidea stipitata,Paucispora kunmingense,Phaeoisaria microspora,Pleurothecium floriforme,Poaceascoma halophila,Periconia aquatica,Periconia submersa,Phaeosphaeria acaciae,Phaeopoacea muriformis,Pseudopithomyces kunmingnensis,Ramgea ozimecii,Sardiniella celtidis,Seimatosporium italicum,Setoseptoria scirpi,Torula gaodangensis and Vamsapriya breviconidiophora.We also provide an amended account of Rhytidhysteron to include apothecial ascomata and a J?hymenium.The type species of Ascotrichella hawksworthii(Xylariales genera incertae sedis),Biciliopsis leptogiicola(Sordariomycetes genera incertae sedis),Brooksia tropicalis(Micropeltidaceae),Bryochiton monascus(Teratosphaeriaceae),Bryomyces scapaniae(Pseudoperisporiaceae),Buelliella minimula(Dothideomycetes genera incertae sedis),Carinispora nypae(Pseudoastrosphaeriellaceae),Cocciscia hammeri(Verrucariaceae),Endoxylina astroidea(Diatrypaceae),Exserohilum turcicum(Pleosporaceae),Immotthia hypoxylon(Roussoellaceae),Licopolia franciscana(Vizellaceae),Murispora rubicunda(Amniculicolaceae)and Doratospora guianensis(synonymized under Rizalia guianensis,Trichosphaeriaceae)were reexamined and descriptions,illustrations and discussion on their familial placement are given based on phylogeny and morphological data.New host records or new country reports are provided for Chlamydotubeufia huaikangplaensis,Colletotrichum fioriniae,Diaporthe subclavata,Diatrypella vulgaris,Immersidiscosia eucalypti,Leptoxyphium glochidion,Stemphylium vesicarium,Tetraploa yakushimensis and Xepicula leucotricha.Diaporthe baccae is synonymized under Diaporthe rhusicola.A reference specimen is provided for Periconia minutissima.Updated phylogenetic trees are provided for most families and genera.We introduce the new basidiomycete species Agaricus purpurlesquameus,Agaricus rufusfibrillosus,Lactifluus holophyllus,Lactifluus luteolamellatus,Lactifluus pseudohygrophoroides,Russula benwooii,Russula hypofragilis,Russula obscurozelleri,Russula parapallens,Russula phoenicea,Russula pseudopelargonia,Russula pseudotsugarum,Russula rhodocephala,Russula salishensis,Steccherinum amapaense,Tephrocybella constrictospora,Tyromyces amazonicus and Tyromyces angulatus and provide updated trees to the genera.We also introduce Mortierella formicae in Mortierellales,Mucoromycota and provide an updated phylogenetic tree.展开更多
This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and illustrated.Taxa described in the present study include ...This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and illustrated.Taxa described in the present study include one new family(viz.Pseudoberkleasmiaceae in Dothideomycetes),five new genera(Caatingomyces,Cryptoschizotrema,Neoacladium,Paramassaria and Trochilispora)and 71 new species,(viz.Acrogenospora thailandica,Amniculicola aquatica,A.guttulata,Angustimassarina sylvatica,Blackwellomyces lateris,Boubovia gelatinosa,Buellia viridula,Caatingomyces brasiliensis,Calophoma humuli,Camarosporidiella mori,Canalisporium dehongense,Cantharellus brunneopallidus,C.griseotinctus,Castanediella meliponae,Coprinopsis psammophila,Cordyceps succavus,Cortinarius minusculus,C.subscotoides,Diaporthe italiana,D.rumicicola,Diatrypella delonicis,Dictyocheirospora aquadulcis,D.taiwanense,Digitodesmium chiangmaiense,Distoseptispora dehongensis,D.palmarum,Dothiorella styphnolobii,Ellisembia aurea,Falciformispora aquatic,Fomitiporia carpinea,F.lagerstroemiae,Grammothele aurantiaca,G.micropora,Hermatomyces bauhiniae,Jahnula queenslandica,Kamalomyces mangrovei,Lecidella yunnanensis,Micarea squamulosa,Muriphaeosphaeria angustifoliae,Neoacladium indicum,Neodidymelliopsis sambuci,Neosetophoma miscanthi,N.salicis,Nodulosphaeria aquilegiae,N.thalictri,Paramassaria samaneae,Penicillium circulare,P.geumsanense,P.mali-pumilae,P.psychrotrophicum,P.wandoense,Phaeoisaria siamensis,Phaeopoacea asparagicola,Phaeosphaeria penniseti,Plectocarpon galapagoense,Porina sorediata,Pseudoberkleasmium chiangmaiense,Pyrenochaetopsis sinensis,Rhizophydium koreanum,Russula prasina,Sporoschisma chiangraiense,Stigmatomyces chamaemyiae,S.cocksii,S.papei,S.tschirnhausii,S.vikhrevii,Thysanorea uniseptata,Torula breviconidiophora,T.polyseptata,Trochilispora schefflerae and Vaginatispora palmae).Further,twelve new combinations(viz.Cryptoschizotrema cryptotrema,Prolixandromyces australi,P.elongatus,P.falcatus,P.longispinae,P.microveliae,P.neoalardi,P.polhemorum,P.protuberans,P.pseudoveliae,P.tenuistipitis and P.umbonatus),an epitype is chosen for Cantharellus goossensiae,a reference specimen for Acrogenospora sphaerocephala and new synonym Prolixandromyces are designated.Twenty-four new records on new hosts and new geographical distributions are also reported(i.e.Acrostalagmus annulatus,Cantharellus goossensiae,Coprinopsis villosa,Dothiorella plurivora,Dothiorella rhamni,Dothiorella symphoricarposicola,Dictyocheirospora rotunda,Fasciatispora arengae,Grammothele brasiliensis,Lasiodiplodia iraniensis,Lembosia xyliae,Morenoina palmicola,Murispora cicognanii,Neodidymelliopsis farokhinejadii,Neolinocarpon rachidis,Nothophoma quercina,Peroneutypa scoparia,Pestalotiopsis aggestorum,Pilidium concavum,Plagiostoma salicellum,Protofenestella ulmi,Sarocladium kiliense,Tetraploa nagasakiensis and Vaginatispora armatispora).展开更多
Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours.These taxa often have complex and poorly understood life cycles,lack observab...Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours.These taxa often have complex and poorly understood life cycles,lack observable,discriminatory morphological characters,and may not be amenable to in vitro culturing.As a result,species identification is frequently difficult.Molecular(DNA sequence)data have emerged as crucial information for the taxonomic identification of plant pathogenic fungi,with the nuclear ribosomal internal transcribed spacer(ITS)region being the most popular marker.However,international nucleotide sequence databases are accumulating numerous sequences of compromised or low-resolution taxonomic annotations and substandard technical quality,making their use in the molecular identification of plant pathogenic fungi problematic.Here we report on a concerted effort to identify high-quality reference sequences for various plant pathogenic fungi and to re-annotate incorrectly or insufficiently annotated public ITS sequences from these fungal lineages.A third objective was to enrich the sequences with geographical and ecological metadata.The results-a total of 31,954 changes-are incorporated in and made available through the UNITE database for molecular identification of fungi(http://unite.ut.ee),including standalone FASTA files of sequence data for local BLAST searches,use in the next-generation sequencing analysis platforms QIIME and mothur,and related applications.The present initiative is just a beginning to cover the wide spectrum of plant pathogenic fungi,and we invite all researchers with pertinent expertise to join the annotation effort.展开更多
Taxonomic names are key links between various databases that store information on different organisms.Several global fungal nomenclural and taxonomic databases(notably Index Fungorum,Species Fungorum and MycoBank)can ...Taxonomic names are key links between various databases that store information on different organisms.Several global fungal nomenclural and taxonomic databases(notably Index Fungorum,Species Fungorum and MycoBank)can be sourced to find taxonomic details about fungi,while DNA sequence data can be sourced from NCBI,EBI and UNITE databases.Although the sequence data may be linked to a name,the quality of the metadata is variable and generally there is no corresponding link to images,descriptions or herbarium material.There is generally no way to establish the accuracy of the names in these genomic databases,other than whether the submission is from a reputable source.To tackle this problem,a new database(FacesofFungi),accessible at www.facesoffungi.org(FoF)has been established.This fungal database allows deposition of taxonomic data,phenotypic details and other useful data,which will enhance our current taxonomic understanding and ultimately enable mycologists to gain better and updated insights into the current fungal classification system.In addition,the database will also allow access to comprehensive metadata including descriptions of voucher and type specimens.This database is user-friendly,providing links and easy access between taxonomic ranks,with the classification system based primarily on molecular data(from the literature and via updated web-based phylogenetic trees),and to a lesser extent on morphological data when molecular data are unavailable.In FoF species are not only linked to the closest phylogenetic representatives,but also relevant data is provided,wherever available,on various applied aspects,such as ecological,industrial,quarantine and chemical uses.The data include the three main fungal groups(Ascomycota,Basidiomycota,Basal fungi)and fungus-like organisms.The FoF webpage is an output funded by the Mushroom Research Foundation which is an NGO with seven directors with mycological expertise.The webpage has 76 curators,and with the help of these specialists,FoF will provide an updated natural classification of the fungi,with illustrated accounts of species linked to molecular data.The present paper introduces the FoF database to the scientific community and briefly reviews some of the problems associated with classification and identification of the main fungal groups.The structure and use of the database is then explained.We would like to invite all mycologists to contribute to these web pages.展开更多
This article is the 19th contribution to the fungal diversity notes series,in which 106 taxa distributed in 3 phyla,11 classes,35 orders,and 64 families are treated.Taxa described in the present study include a new fa...This article is the 19th contribution to the fungal diversity notes series,in which 106 taxa distributed in 3 phyla,11 classes,35 orders,and 64 families are treated.Taxa described in the present study include a new family,5 new genera,69 new species,3 new combinations,25 new host,habitat,and geographical records,a new name,a new collection,as well as reinstating a previously suppressed genus.The newly established family is Parasporidesmiaceae and the five new genera described herein are Dematiodidymosporum,Neoacrogenospora,Parasporidesmium,Speluncomyces,and Uniomyces.The 69 new species are Acrocalymma triseptatum,Agaricus darjeelingensis,Annellophorella aquatica,Anteaglonium menghaiense,Balsamia microspora,Bambusicola dehongensis,Barriopsis menglaense,Benjaminiomyces bergonzoi,Camporesiomyces aquaticus,Camporesiomyces wurfbainiae,Cercospora palmata,Chrysomphalina cantharella,Colletotrichum heteropanacicola,Conioscypha guizhouensis,Conioscypha yadongensis,Cora dalfornoae,Cylindromonium brasiliense,Dematiodidymosporum aquaticum,Distoseptispora dinghuensis,Distoseptispora zunyiensis,Ebollia neocarnea,Eudimeromyces aequatorialis,Eudimeromyces euconni,Funalia indica,Fuscosporella ovalis,Fuscosporella yunnanensis,Halobasidium csapodyae,Halokirschsteiniothelia hunanensis,Hongkongmyces xishuangbannaensis,Inocybe ispartaensis,Laboulbenia neofrancoisiana,Lachnella kunmingensis,Lasmenia thailandica,Leptospora cannabini,Lycoperdon sridharii,Myxospora neomasonii,Natipusilla aquatica,Neoacrogenospora aquatica,Neomassaria sinensis,Neovaginatispora juglandis,Niesslia yunnanensis,Ophiocordyceps aseptatospora,Oxneriaria sheosarensis,Paramicrosphaeropsis vitis,Paramyrothecium strychni,Parapaucispora aquatica,Parasporidesmium aquaticum,Parmelia neosaxatilis,Periconia bambusicola,Periconia neohongheensis,Peroneutypa thailandica,Polyozellus albus,Porina magnoliae,Porostereum subspadiceum,Pseudosperma subvolvatum,Pseudothyridariella caseariae,Rhexocercosporidium ferulae,Russula rubroglutinata,Septoriella iranica,Seriascoma asexuale,Sesquicillium flavum,Sirastachys zhongkaiensis,Speluncomyces lunatus,Sporidesmiella yunnanensis,Striaticonidium xishuangbannaensis,Trametopsis indica,Tulostoma hyderabadensis,Uniomyces hakkeijimanus,and Virgaria guizhouensis.The three new combinations are Lycoperdon alpinum,Lycoperdon lloydii,and Lycoperdon macrogemmae.The 25 new records comprise Acremonium sclerotigenum,Agroathelia rolfsii,Alfaria terrestris,Aspergillus cejpii,Colletotrichum brevisporum,Coriolopsis brunneoleuca,Coriolopsis hainanensis,Cytospora tamaricicola,Fomitopsis malicola,Fulvifomes fastuosus,Fulvifomes thailandicus,Funalia cystidiata,Funalia subgallica,Longididymella vitalbae,Lopharia mirabilis,Metarhizium viridulum,Neopestalotiopsis haikouensis,Occultibambusa aquatica,Phaeoacremonium scolyti,Phaeocytostroma virdimurae,Puccinia mysuruensis,Rhizopus stolonifer,Serpula similis,Trametes ellipsospora,and Vamsapriya shiwandashanensis.In addition,the new name is Irpiciporus pseudoxuchilensis,and the new collection is Aspergillus sydowii.The previously suppressed genus Eudimeromyces has been taxonomically reinstated.展开更多
基金the Suzano Celulose S/A for logistical supportthe‘‘Conselho Nacional de Desenvolvimento Científico e Tecnológico’’(CNPq)+1 种基金the‘‘Coordenao de Aperfeioamento de Pessoal de Nível Superior’’(CAPES)the‘‘Fundao de Amparo à Pesquisa do Estado de Minas Gerais’’(FAPEMIG)for financial support to this study
文摘Disease-resistant genes play an important role in defending against a variety of pathogens and insect pests in plants. Most of the disease-resistant genes encode pro- teins with conserved leucine rich repeat and nucleotide binding site domains. In this study, we cloned and char- acterized gene-resistant analogs （RGAs） from Eucalyptus grandis using degenerate PCR, with primers specifically targeting these two domains. The amplified fragments were cloned into the pGEM-T vector and transformed into Escherichia coli. Among the 90 clones obtained, 13 were sequenced and compared with each other and with previ- ously identified gene-resistant diseases. A BLASTX search in GenBank revealed high similarities among the con- served domains of these cloned genes with RGA genes. Some clones, however, showed no significant similarity with DNA sequences in GenBank. Southern blotting ana- lysis identified several polymorphic RFLP loci between distinct genotypes. However, none of them co-segregated with the Puccinia psidii Winter resistance gene 1 （Ppr1） in a population study.
基金the financial support of the work(CAG-APQ-00987-11)Conselho Nacional de Desenvolvimento Científico e Tecnológico-CNPq for authors fellowships。
文摘The global expansion of cultivation areas of Jatropha has contributed to the emergence of various diseases.Currently in Brazil,the occurrence of a new disease has been reported that not only reduces the productivity but also causes the death of Jatropha.This disease is associated with collar and root rot of plants.From morphological and phylogenetic studies(based on Internal Transcribed Spacers,β-tubulin and Translation Elongation Factor 1-αsequences),nine species of Botryosphaeriaceae were identified.These species include Lasiodiplodia egyptiacae,L.pseudotheobromae,L.theobromae,Macrophomina phaseolina,Neoscytalidium hyalinum and four Lasiodiplodia spp.that are proposed as new species(L.euphorbicola,L.jatrophicola,L.macrospora and L.subglobosa).All the species in this study,except M.phaseolina,are pathogenic.The results show that root rot of physic nut plants is caused by complex pathogens.This study provides new information for future studies of disease management,quarantine programs and,especially,the development of resistant varieties for collar and root rot disease in J.curcas.
基金supported by the Dutch Ministry of Agriculture,Nature and Food Quality through an endowment of the FES programme“Versterking infrastructuur Plantgezondheid”.
文摘Colletotrichum orbiculare causes anthracnose of Cucurbitaceae and is phylogenetically closely related to pathogens of several other herbaceous hosts belonging to the Asteraceae,Fabaceae and Malvaceae.Most of them are known for their hemibiotrophic infection strategy and as destructive pathogens either of field crops or weeds.In order to study the phylogenetic relationships of these fungi,a multilocus analysis(ITS,GAPDH,CHS-1,HIS3,ACT,TUB2,GS)of 42 strains of C.orbiculare and related species was conducted.The analysis resulted in nine clades that confirmed the four species previously known as belonging to this species complex,C.lindemuthianum,C.malvarum,C.orbiculare and C.trifolii,and recognised four new species from weeds,namely C.bidentis,C.sidae,C.spinosum and C.tebeestii.The name C.orbiculare itself is widely used in plant pathology and science,but is invalid according to current nomenclatural rules.Therefore we described a new species with the same epithet and a type specimen that agrees with our current understanding of this species,and is linked to a living culture.Following the recent epitypification of C.lindemuthianum,we chose appropriate specimens with associated strains to serve as epitypes of C.malvarum and C.trifolii,and selected an authentic specimen of C.trifolii as lectotype.
基金National Natural Science Foundation of China(Nos.32370021 and 31860008)the Innovative team program of the Department of Education of Guangdong Province(Nos.2022KCXTD015 and 2022ZDJS020)+75 种基金the Project of Fungi Investigation in Tomur Mountains National Nature Reserve(2021-01-139-2)the National Natural Science Foundation of China(No.32100012)the Science and Technology Bureau of Guangzhou City(202201011618)to acknowledge Zhongkai University of Agriculture and Engineering,talent funding(Grant number KA210319288)the Guangzhou Science and Technology Plan Project(2023A04J1427)the Key Laboratory of Green Prevention and Control on Fruits and Vegetables in South China,Guangdong(KA21031C502)Zhongkai University of Agriculture and Engineering,Guangzhou,Guangdong,China(KA22016B746)for financial research supportthe UP System Balik PhD Program(OVPAA-BPhD-2022-02)Yunnan Department of Sciences and Technology of China(Grant No:202101AS070045,202205AM070007,202302AE090023,202303AP140001)the financial support provided by the Distinguished Scientist Fellowship Program(DSFP)at King Saud University in Riyadh,Saudi ArabiaScience&Engineering Research Board(SERB),Department of Science&Technology(DST)Govt.of India(Scheme No.CRG/2020/006053)Institution of Eminence(IoE)Scheme,Ministry of Human Resource and Development(MHRD),Govt.of India(No.R/Dev/D/IoE/Incentive/2021-22/32387)for providing financial supportGenivaldo Alves-Silva,Elisandro R.Drechsler-Santos,Rosa M.B.da Silveira,and Aristóteles Góes-Neto are supported by Conselho Nacional de Desenvolvimento Científico e Tecnológico(CNPq)(Grant No.153025/2022-0,310150/2022-1,308122/2019-4,308880/2022-6,respectively)the CNPq and FAPESC under the PROTAX program(Grant No.FAPESC 2021TR390,Grant No.CNPq 441821/2020-0)and M.E.Engels for collectionsde Desenvolvimento Científico e Tecnológico(CNPq),Brazil,that provided research grants to B.T.Goto(proc.306632/2022-5)support from the National Science and Technology Council is acknowledged(101-2621-B-019-001-MY3)supported by Prof.Dr.M.Schnittler(University of Greifswald,Germany),through the DFG project RESPONSE(RTG2010)study by Ralaiveloarisoa Asupported by the Today’s Flora for Tomorrow project funded by a generous donor through the Kew Foundation,and by a grant from the Bentham-Moxon Trustsupported by the Bulgarian National Science Fund(Grant no.KP-06-N51/10/16.11.2021)the herbarium at the Botanic Garden and Botanical Museum Berlin received support from the SYNTHESYS Plus Project http://www.synthesys.info,which is financed by the H2020 Research Infrastructures Programme(Grant no.DE-TAF-8193)providing tuition fee scholarship.The Center for Yunnan Plateau Biological Resources Protection and Utilization,College of Biological Resource and Food Engineering,Qujing Normal University is thanked for the facilities provided for the research worksupported by the National Natural Science Foundation of China(No.32060012)Muhammad Usman and Abdul Nasir Khalid would like to thank Dr.Kamran Habib,Dr.Muhammad Ali,Mr.Mohammad Aijaz Ahmad and Mr.Muhammad Shafiq for accompanying during the collection surveythe Science and Engineering Research Board(SERB)the Department of Science and Technology,Government of India,for their financial support through CRG/2020/000668 projectthe MACS Agharkar Research Institute in Pune,for providing the lab resources and motivating us in our research workFunding Scheme for Research and Innovation grant for the project“Discovery of new antivirals using cultures of filamentous fungi collected in Europe and Thailand as compound sources(JFS20ST-127 Antiviralfun,P2150844)”BIOTEC-Novartis collaboration for microbial bioprospecting project(P20-52031)to CSIR-HRDG,India,for providing her with financial assistance as part of the JRF fellowship(09/0670(13602)/2022-EMR-I)to Javier Etayo(Pamplona)for his valuable suggestionsNational Science Foundation of China(No.31870528)support from Iran National Science Foundation(INSF,no.4000655)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior-Brasil(CAPES)-Finance Code 001 who provided a visiting professorship to the first authorsupporting this work with a PhD’s scholarship to LAS(140847/2019-7)a research grant to MESC(307569/2019-5)and for financial support in the Universal project(Process:437097/2018-8ERDF-A way of making Europe(Grant PID2021-128068NB-100)the Department of Biotechnology(DBT),Government of India(Grant no.BT/PR/0054/NDB/52/94/2007)support under the project‘Establishment of Microbial Culture Collection(NCMR-NCCS).’Gajanan Mane is thankful to the University Grants Commission,Delhi(India)for the senior research fellowship(File No.16-6(Dec.2017)/2018(NET/CSIR)Rohit Sharma thanks the Department of Biotechnology(DBT),Government of India(Grant no.BT/PR25490/NER/95/1220/2017 dated 28.06.2018),for financial supportthe grant from the Guangdong Rural Science and Technology Commissioner project(KTP20210313)the Key Laboratory of Green Prevention and Control on Fruits and Vegetables in South China,Guangdong(KA21031C501)the Innovative Team program of the Department of Education of Guangdong Province(2023KCXTD018/2022KCXTD015)Extramural Research-SERB,DST(EMR/2016/003078)Government of India for the financial assistanceto‘The PCCF’of the Tamil Nadu Forest Department for providing permission(E2/20458/2017)assistance and support during field visit in the Eastern Ghats.Malarvizhi Kaliyaperumal and Kezhocuyi Kezo thank RUSA 2.0(Theme-1,Group-1/2021/49)for providing grantthe Tamil Nadu State Council for Higher Education,Chennai(RGP/2019-20/MU/HECP-0040)for financial assistancethe National Science Foundation of China(No.31870528)support under statutory funds from the W.Szafer Institute of Botany,Polish Academy of Sciencesto ICMBio(Instituto Chico Mendes de Conservação da Biodiversidade)and IF(Instituto Florestal)for the collecting permits#38466-2 and#260108-001.102/2015,respectivelyinanced in part by Coordination of Improvement of Higher Education Personnel-Brazil(CAPES)-Finance Code 001 and by the National Council for Scientific and Technological Development(to LFPG and Proc.305269/2018-6 to AR)to LFPG and Proc.305269/2018-6 to AR)the Program CAPES-PrInt,process number 88887.310463/2018-00Mobility numbers#88887.468939/2019-00 and#88887.571230/2020-00the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior CAPES(processes numbers CAPES 88887.360774/2019-00)Conselho Nacional Desenvolvimento Científico e Tecnológico CNPq(ONDACBC:465764/2014-2 and NEXUS:441305/2017-2)the Fundação de AmparoàCiência e Tecnologia de Pernambuco-FACEPE(BFP-0046-5.01/20,APQ-0350-2.12/19 and APQ 1527-5.01/22)the Conselho Nacional de Desenvolvimento Científico e Tecnológico-CNPq(Proc.312606/2022-2)the National Natural Science Foundation of China(Project ID:32060005)and the Yunnan Fundamental Research Project(202201AW070001)the National Natural Science Foundation of China(No.32260004)Yunnan Revitalization Talents Support Plan(High-End Foreign Experts Program)the Key Laboratory of Yunnan Provincial Department of Education of the Deep-Time Evolution on Biodiversity from the Origin of the Pearl River for their support.Xing-Can Peng and Ting-Chi Wen acknowledge the support by the National Natural Science Foundation of China(No.32060012)Department of Sciences and Technology of China(No.202202AE090091)the National Natural Science Foundation of China(Grant No.32200015)the foundation of the Guangzhou bureau of science and technology(Grant No.2023A04J1425)Thailand Science Research and Innovation(TSRI)for the grant“Biodiversity,taxonomy,phylogeny and evolution of Colletotrichum on Avocado,Citrus,Durian and Mango in northern Thailand”(Grant no.652A01003)the National Natural Science Foundation of China(No.NSFC 32260004)and the Yunnan Revitalization Talents Support Plan(Young Talents Program and High-End Foreign Experts Program)The Center for Yunnan Plateau Biological Resources Protection and Utilization,College of Biological Resource and Food Engineering,Qujing Normal University for the facilities provided for the research workthe National Natural Science Foundation of China(Grant no.31600019)the Modern Agricultural Industry Technology System Flower Innovation Team of Guangdong Province(Grant no.2023KJ121)the Project of Educational Commission of Guangdong Province of China(Grant no.2021KTSCX045)the research productivity fellowship(Grant No.303834/2020-0)the Eminent scholar offered by Kyun Hee Universitythe Chinese Research Fund,Grant number E1644111K1,titled“Flexible introduction of the high-level expert program,Kunming Institute of Botany,Chinese Academy of Sciences”for financial supportthe Italian National Antarctic Research Program for funding Antarctic campaingssupport to the Mycological Section of the MNA and the Culture Collection of Antarctic fungi(MNA-CCFEE),University of Tuscia,Italy.
文摘This article is the 17th in the Fungal Diversity Notes series which allows the researchers to publish fungal collections with updated reports of fungus-host and fungus-geography.Herein we report 97 taxa with four new genera distributed in three phyla(Ascomycota,Glomeromycota and Mucoromycota),11 classes,38 orders and 62 families collected from various regions worldwide.This collection is further classified into taxa from 69 genera with four novel genera namely Jinshana,Lithophyllospora,Parapolyplosphaeria and Stegonsporiicola.Furthermore,71 new species,21 new records,one new combination and four novel phylogenetic placements are provided.The new species comprise Acrocalymma estuarinum,Aggregatorygma isidiatum,Alleppeysporonites elsikii,Amphibambusa aquatica,Apiospora hongheensis,Arthrobotrys tachengensis,Calonectria potisiana,Collariella hongheensis,Colletotrichum squamosae,Corynespora chengduensis,Diaporthe beijingensis,Dicellaesporites plicatus,Dicellaesporites verrucatus,Dictyoarthrinium endophyticum,Distoseptispora chiangraiensis,Dothiora eucalypti,Epicoccum indicum,Exesisporites chandrae,Fitzroyomyces pseudopandanicola,Fomitiporia exigua,Fomitiporia rondonii,Fulvifomes subthailandicus,Gigaspora siqueirae,Gymnopus ailaoensis,Hyalorbilia yunnanensis,Hygrocybe minimiholatra,H.mitsinjoensis,H.parviholatra,H.solis,H.vintsy,Helicogermslita kunmingensis,Jinshana tangtangiae,Kirschsteiniothelia dujuanhuensis,Lamproderma subcristatum,Leucoagaricus madagascarensis,Leucocoprinus mantadiaensis,Lithophyllospora australis,Marasmius qujingensis,Melomastia aquilariae,Monoporisporites jansoniusii,M.pattersonii,Monoporisporites valdiyae,Mucispora maesotensis,Mucor soli,Muyocopron yunnanensis,Nigrospora tomentosae,Ocellularia psorirregularis,Ophiocordyceps duyunensis,Oxneriaria nigrodisca,Oxydothis aquatica,O.filiforme,Phacidiella xishuangbannaensis,Phlebiopsis subgriseofuscescens,Pleurothecium takense,Pleurotus tuber-regium,Pseudochaetosphaeronema puerensis,Pseudodactylaria guttulate,Racheliella chinensis,Rhexoacrodictys fangensis,Roussoella neoaquatica,Rubroboletus pruinosus,Sanghuangporus subzonatus,Scytalidium assmuthi,Shrungabeeja kudremukhensis,Spirographa skorinae,Stanjehughesia bambusicola,Stegonsporiicola aurantiaca,Umbelopsis hingganensis,Vararia tenuata,Verruconis pakchongensis,Wongia bandungensis,and Zygosporium cymodoceae.The new combination is Parapolyplosphaeria thailandica(≡Polyplosphaeria thailandica).The 21 new hosts,geographical and habitat records comprise Acrocalymma fici,Apiculospora spartii,Aspergillus subramanianii,Camposporium ramosum,Clonostachys rogersoniana,Colletotrichum brevisporum,C.plurivorum,Collybiopsis gibbosa,Dictyosporium tratense,Distoseptispora adscendens,Exosporium livistonae,Ganoderma gibbosum,Graphis mikuraensis,Gymnosporangium paraphysatum,Lasiodiplodia thailandica,Moesziomyces bullatus,Penicillium cremeogriseum,P.echinulonalgiovense,P.javanicum,P.lanosocoeruleum,P.polonicum,and Pleurotus tuber-regium.Graphis chlorotica,G.panhalensis and G.parilis are given as novel phylogenetic placements.In addition,we provide the morphology of Tarzetta tibetensis which was missing in the previous Fungal Diversity Notes 1611–1716.Identification of characterization of all these taxa are supported by morphological and multigene phylogenetic analyses.
基金The authors extend their appreciation to the International Scientific Partnership Program ISPP at King Saud University for funding this research work through ISPP#0089.Kevin D.Hyde would like to thank the Molecular Biology Experimental Center for the help on molecular work,the Mushroom Research Foundation(MRF),Chiang Rai,Thailand,the Thailand Research Fund grant no RSA5980068 entitled Biodiversity,Phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans,the Chinese Academy of Sciences,Project Number 2013T2S0030for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany and Mae Fah Luang University for a grants“Biodiversity,phylogeny and role of fungal endophytes of Pandanaceae”(Grant number:592010200112)+11 种基金“Diseases of mangrove trees and maintenance of good forestry practice”(Grant number:60201000201 for supporting this study.K.D.Hyde is an Adjunct Professor at Chiang Mai University.Financial support by the German Academic Exchange Service(DAAD)and the Thai Royal Golden Ph.D.Jubilee-Industry program(RGJ)for a joint TRF-DAAD PPP(2012-2014)academic exchange grant to Kevin D.Hyde and Marc Stadler,and the RGJ for a personal grant to Benjarong Thongbai(No.Ph.D/0138/2553 in 4.S.MF/53/A.3)is gratefully acknowledged.Satinee Suetrong thanks to Apilux Loilong for collecting samples.This work was supported by the TRF/BIOTEC program for Biodiversity Research and Training Grant BRT R_352112,R_249001,R_251006.For their continued interest and support we also thank BIOTEC,Prof.Morakot Tanticharoen,Dr.Kanyawim Kirtikara and Dr.Lily Eurwilaichitr.Rungtiwa Phookamsak expresses appreciation to The CAS President’s International Fellowship for Postdoctoral Researchers,project number 2017PB0072the Research Fund from China Postdoctoral Science Foundation(Grant No.Y71B283261)and Chiang Mai University for financial supportWe would like to thank DrsRobert Lucking,AndreAptroot and Cecile Gueidan for available suggestion.Saranyaphat Boonmee would like to thank the National Research Council of Thailand(no.2560A30702021)the Thailand Research Fund(Project No.TRG5880152)Chayanard Phukhamsakda would like to thank Royal Golden Jubilee Ph.D.Program under Thailand Research Fund,for the award of a scholarship no.PHD/0020/2557.Ausana Mapook is grateful to Research and Researchers for Industries(RRI)PHD57I0012.Ting-Chi Wen and Yuan-Pin Xiao are grateful to The National Natural Science Foundation of China(Nos.31460012 and 3161113034)Samantha C.Karunarathna thanks Yunnan Provincial Department of Human Resources and Social Security funded postdoctoral project(Number 179122)for supporting his postdoctoral research study.Ivana Kusan and Zdenko Tkalcec have been partially supported by Croatian Science Foundation under the project HRZZIP-11-2013-2202(ACCTA)We would also like to thank Roman Ozimec and Najla Bakovicfor collecting the samples and partially Oikon Ltd.for financing the fieldwork.We would like to thank Dr.Shaun Pennycook for checking most of the Latin names.Qing Tian and Putarak Chomnunti extend their sincere thanks to the National Research Council of Thailand(grant for Dothideomycetes No.2560A30702014)Putarak Chomnunti would like to thanks for Thailand Research Fund grant no.MRG6080089Dr.Rajesh Jeewon is grateful to University of Mauritius and Mae Fah Luang University for research support.Olinto L.Pereira thank the CAPES,CNPq and FAPEMIG for financial support and ICMBio/FLONA-Paraopeba for providing facilities and permits for the exploration surveys of the mycodiversity in their protected areas.Young Woon Lim and Hyun Lee are grateful to the National Institute of Biological Resources(NIBR 20171104)Republic of Korea.The study was partially supported by the National Science Centre,Poland under grant No.2015/17/D/NZ8/00778 to Julia Pawłowska and UMO-2016/23/B/NZ8/00897 to Marta Wrzosek.Anna Bazzicalupo,Bart Buyck,Daniel Miller and Mary L.Berbee thank WTU and the Burke Museum for scanned images of Benjamin Woo’s datasheets and photographs of Russula specimens and for the loan of Woo’s specimens.Mary L.Berbee acknowledges support by Discovery Grant RGPIN-2016-03746National Science and Engineering Research Council of Canada.Anna Bazzicalupo acknowledges the student grants for field work and study abroad from the NSERC CREATE Training Program in Biodiversity Research,Sonoma County Mycological Association Student Grant,and Daniel E.Stuntz Memorial Foundation Individual Grant.The Key Research Program of Frontier Sciences of the Chinese Academy of Sciences(grant number QYZDY-SSW-SMC014)is also thanked for support.
文摘This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomycetes.We also introduce the new ascomycete genera Acericola,Castellaniomyces,Dictyosporina and Longitudinalis and new species Acericola italica,Alternariaster trigonosporus,Amarenomyces dactylidis,Angustimassarina coryli,Astrocystis bambusicola,Castellaniomyces rosae,Chaetothyrina artocarpi,Chlamydotubeufia krabiensis,Colletotrichum lauri,Collodiscula chiangraiensis,Curvularia palmicola,Cytospora mali-sylvestris,Dictyocheirospora cheirospora,Dictyosporina ferruginea,Dothiora coronillae,Dothiora spartii,Dyfrolomyces phetchaburiensis,Epicoccum cedri,Epicoccum pruni,Fasciatispora calami,Fuscostagonospora cytisi,Grandibotrys hyalinus,Hermatomyces nabanheensis,Hongkongmyces thailandica,Hysterium rhizophorae,Jahnula guttulaspora,Kirschsteiniothelia rostrata,Koorchalomella salmonispora,Longitudinalis nabanheensis,Lophium zalerioides,Magnibotryascoma mali,Meliola clerodendri-infortunati,Microthyrium chinense,Neodidymelliopsis moricola,Neophaeocryptopus spartii,Nigrograna thymi,Ophiocordyceps cossidarum,Ophiocordyceps issidarum,Ophiosimulans plantaginis,Otidea pruinosa,Otidea stipitata,Paucispora kunmingense,Phaeoisaria microspora,Pleurothecium floriforme,Poaceascoma halophila,Periconia aquatica,Periconia submersa,Phaeosphaeria acaciae,Phaeopoacea muriformis,Pseudopithomyces kunmingnensis,Ramgea ozimecii,Sardiniella celtidis,Seimatosporium italicum,Setoseptoria scirpi,Torula gaodangensis and Vamsapriya breviconidiophora.We also provide an amended account of Rhytidhysteron to include apothecial ascomata and a J?hymenium.The type species of Ascotrichella hawksworthii(Xylariales genera incertae sedis),Biciliopsis leptogiicola(Sordariomycetes genera incertae sedis),Brooksia tropicalis(Micropeltidaceae),Bryochiton monascus(Teratosphaeriaceae),Bryomyces scapaniae(Pseudoperisporiaceae),Buelliella minimula(Dothideomycetes genera incertae sedis),Carinispora nypae(Pseudoastrosphaeriellaceae),Cocciscia hammeri(Verrucariaceae),Endoxylina astroidea(Diatrypaceae),Exserohilum turcicum(Pleosporaceae),Immotthia hypoxylon(Roussoellaceae),Licopolia franciscana(Vizellaceae),Murispora rubicunda(Amniculicolaceae)and Doratospora guianensis(synonymized under Rizalia guianensis,Trichosphaeriaceae)were reexamined and descriptions,illustrations and discussion on their familial placement are given based on phylogeny and morphological data.New host records or new country reports are provided for Chlamydotubeufia huaikangplaensis,Colletotrichum fioriniae,Diaporthe subclavata,Diatrypella vulgaris,Immersidiscosia eucalypti,Leptoxyphium glochidion,Stemphylium vesicarium,Tetraploa yakushimensis and Xepicula leucotricha.Diaporthe baccae is synonymized under Diaporthe rhusicola.A reference specimen is provided for Periconia minutissima.Updated phylogenetic trees are provided for most families and genera.We introduce the new basidiomycete species Agaricus purpurlesquameus,Agaricus rufusfibrillosus,Lactifluus holophyllus,Lactifluus luteolamellatus,Lactifluus pseudohygrophoroides,Russula benwooii,Russula hypofragilis,Russula obscurozelleri,Russula parapallens,Russula phoenicea,Russula pseudopelargonia,Russula pseudotsugarum,Russula rhodocephala,Russula salishensis,Steccherinum amapaense,Tephrocybella constrictospora,Tyromyces amazonicus and Tyromyces angulatus and provide updated trees to the genera.We also introduce Mortierella formicae in Mortierellales,Mucoromycota and provide an updated phylogenetic tree.
基金the Foreign Experts Bureau of Yunnan Province,Foreign Talents Program(2018,Grant No.YNZ2018002)Thailand Research grants entitled Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans(Grant No.RSA5980068)+60 种基金the future of specialist fungi in a changing climate:baseline data for generalist and specialist fungi associated with ants,Rhododendron species and Dracaena species(Grant No.DBG6080013)Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion(Grant No.RDG6130001)Chiang Mai University for the award of visiting ProfessorCAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Grant No.2018PC0006)the National Science Foundation of China(NSFC,project code 31750110478)supported by the Graduate Program for the Undiscovered Taxa of Koreain part by the Project on Survey and Discovery of Indigenous Fungal Species of Korea funded by NIBR and Project on Discovery of Fungi from Freshwater and Collection of Fungarium funded by NNIBR of the Ministry of Environment(MOE)in part carried out with the support of Cooperative Research Program for Agriculture Science and Technology Development(PJ013744),Rural Development Administration,Republic of Koreain part supported by the BK21 plus program through the National Research Foundation(NRF)funded by the Ministry of Education of Korea.Jian-Kui Liu thanks the National Natural Science Foundation of China(NSFC 31600032)the CNPq(Conselho Nacional de Desenvolvimento Cientifico e Tecnologico)for a research grant(309058/2015-5)funding for collecting trips(401186/2014-8)a collaborative project with RL as Special Visiting Professor(314570/2014-4)Funding for phylogenetic work on Graphidaceae was provided by a grant from the National Science Foundation(NSF)to The Field Museum:DEB-1025861"ATM-Assembling a taxonomic monograph:The lichen family Graphidaceae"PI Thorsten Lumbsch,CoPI Robert Luckingthe CAPES,CNPq,and FAPEMIG for financial support and ICMBio/FLONA-Paraopeba for providing facilities and permits for the exploration surveys of the mycodiversity in their protected areasthe Graduate Program for the Biodiversity and Biotechnology Network of the Legal Amazon(UFPA-MPEG,Brazil)the Conselho Nacional de Desenvolvimento Cientifico Programa de Capacitacao for the scholarship to AMSS(Programa de Capacitacao Institucional 303073/2018-7)CNPq(Sisbiota 563342/2010-2,PROTAX 562106/2010-3)FACEPE(APQ 0788-2.03/12)for funding this researchsupport by a long-term research development project No.RVO 67985939 of the Czech Academy of Sciences,Institute of Botanyfinancial support from Conselho Nacional de Pesquisa e Desenvolvimento Cientifico(CNPq)National Natural Science Foundation of China(Project IDs GJL:31500013,RLZ:31470152 and 31360014)for financial supportjoint project of the Charles Darwin Foundation(CDF)and the Galapagos National Park(DPNG),part of a national biodiversity assessment"Biodiversidad Genetica del Ecuador"led by the Instituto Nacional de Biodiversidad del Ecuador(INABIO)Thailand Research Fund(TRF)Grant No.MRG6080089 entitledTaxonomy and phylogeny of foliar fungi from Mangrove and to Dr.Putarak Chomnuntithe Thailand Research Fund(No.TRG6180001)the National Research Council of Thailand(No.61215320023)Plant Genetic Conservation Project under the Royal Initiation of Her Royal Highness Princess Maha Chakri Sirindhorn-Mae Fah Luang Universitygrateful to Croatian Science Foundation for their financial support under the project HRZZ-IP-2018-01-1736(For-FungiDNA)the Royal Golden Jubilee PhD Program under Thailand Research Fund(RGJ)for a personal grant to C.Phukhamsakda(The scholarship no.PHD/0020/2557 to study towards a PhD)China-Thailand Joint Lab on Microbial Biotechnology(Most KY201701011)for financial supportCAS President’s International Fellowship Initiative(PIFI)for young staff(Grant No.2019FYC0003)the Research Fund from China Postdoctoral Science Foundation(Grant No.Y71B283261)the Yunnan Provincial Department of Human Resources and Social Security(Grant No.Y836181261)National Science Foundation of China(NSFC)project code 31850410489 for financial supportthe National Research Council of Thailand(Grant No.256108A3070006)for financial supportthe National Natural Science Foundation of China(No.31760014)the Science and Technology Foundation of Guizhou Province(No.[2016]2863)partially supported by Chiang Mai Universitythe Graduate Program for the Biodiversity and Biotechnology Network of the Legal Amazon(UFPA-MPEG),the Museu Paraense Emilio Goeldi(MPEG),the Universidade do Estado do Amapa and the Universidade Federal de Pernambuco for the logistical support of their laboratories and herbariaCNPq for the scholarship of AMSS(Programa de Capacitacao Institucional 303073/2018-7)CNPq(Sisbiota 563342/2010-2,PROTAX 562106/2010-3)and FACEPE(APQ 0788-2.03/12)for funding this researchthe ATM of the Paris'Museum and"l'Institut Ecologie et Environnement"(CNRS-INEE)for funding the field trip with Shelly Masi to Africaall the practical help and sharing her experiencemade possible through research permit 034/MENESR/DIRCAB/DGESRSTI/DRSTSPI/SSSTI/16 from the"Ministere de l'education nationale,de l’enseignement superieur et de la recherche scientifique"of the Central African Republicfinanced in part by the National Geographic Society(grants 6365-98,7921-05)in more recent years by the ATM-project"Past and present biodiversity"of the Museum national d’histoire naturelle(Dirs.Ph.Janvier and S.Peigne)University of Mauritius for research supportthe Thailand Research Fund(PHD60K0147)contribution number 2248 of the Charles Darwin Foundation for the Galapagos IslandsLakmali Dissanayake and Binu Samarakoon for their supportCAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Number 2019PC0008)the National Science Foundation of China and the Chinese Academy of Sciences for financial support under the following grants:41761144055,41771063 and Y4ZK111B01CAS President’s International Fellowship Initiative(Grant No.2018VBB0021)German Academic Exchange Service Fellowship(Grant No.57314018)Ministry of innovative development of the Republic of Uzbekistan(Projects No.P3-2014-0830174425 and PP-20170921183)for funding his research projectsthe 5th batch of Postdoctoral Orientation Training Personnel in Yunnan Province(Grant No.Y934283261)the 64th batch of China Postdoctoral Science Foundation(Grant No.Y913082271)their kind support on manuscript writing.Jianchu Xu thanks Key Research Program of Frontier Sciences"Response of Asian mountain ecosystems to global change",CAS(Grant No.QYZDYSSW-SMC014)the 64th batch of China Postdoctoral Science Foundation(Grant No.Y913083271)the support from UID/MULTI/04046/2019 Research Unit grant from FCT,Portugal to BioISI.
文摘This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and illustrated.Taxa described in the present study include one new family(viz.Pseudoberkleasmiaceae in Dothideomycetes),five new genera(Caatingomyces,Cryptoschizotrema,Neoacladium,Paramassaria and Trochilispora)and 71 new species,(viz.Acrogenospora thailandica,Amniculicola aquatica,A.guttulata,Angustimassarina sylvatica,Blackwellomyces lateris,Boubovia gelatinosa,Buellia viridula,Caatingomyces brasiliensis,Calophoma humuli,Camarosporidiella mori,Canalisporium dehongense,Cantharellus brunneopallidus,C.griseotinctus,Castanediella meliponae,Coprinopsis psammophila,Cordyceps succavus,Cortinarius minusculus,C.subscotoides,Diaporthe italiana,D.rumicicola,Diatrypella delonicis,Dictyocheirospora aquadulcis,D.taiwanense,Digitodesmium chiangmaiense,Distoseptispora dehongensis,D.palmarum,Dothiorella styphnolobii,Ellisembia aurea,Falciformispora aquatic,Fomitiporia carpinea,F.lagerstroemiae,Grammothele aurantiaca,G.micropora,Hermatomyces bauhiniae,Jahnula queenslandica,Kamalomyces mangrovei,Lecidella yunnanensis,Micarea squamulosa,Muriphaeosphaeria angustifoliae,Neoacladium indicum,Neodidymelliopsis sambuci,Neosetophoma miscanthi,N.salicis,Nodulosphaeria aquilegiae,N.thalictri,Paramassaria samaneae,Penicillium circulare,P.geumsanense,P.mali-pumilae,P.psychrotrophicum,P.wandoense,Phaeoisaria siamensis,Phaeopoacea asparagicola,Phaeosphaeria penniseti,Plectocarpon galapagoense,Porina sorediata,Pseudoberkleasmium chiangmaiense,Pyrenochaetopsis sinensis,Rhizophydium koreanum,Russula prasina,Sporoschisma chiangraiense,Stigmatomyces chamaemyiae,S.cocksii,S.papei,S.tschirnhausii,S.vikhrevii,Thysanorea uniseptata,Torula breviconidiophora,T.polyseptata,Trochilispora schefflerae and Vaginatispora palmae).Further,twelve new combinations(viz.Cryptoschizotrema cryptotrema,Prolixandromyces australi,P.elongatus,P.falcatus,P.longispinae,P.microveliae,P.neoalardi,P.polhemorum,P.protuberans,P.pseudoveliae,P.tenuistipitis and P.umbonatus),an epitype is chosen for Cantharellus goossensiae,a reference specimen for Acrogenospora sphaerocephala and new synonym Prolixandromyces are designated.Twenty-four new records on new hosts and new geographical distributions are also reported(i.e.Acrostalagmus annulatus,Cantharellus goossensiae,Coprinopsis villosa,Dothiorella plurivora,Dothiorella rhamni,Dothiorella symphoricarposicola,Dictyocheirospora rotunda,Fasciatispora arengae,Grammothele brasiliensis,Lasiodiplodia iraniensis,Lembosia xyliae,Morenoina palmicola,Murispora cicognanii,Neodidymelliopsis farokhinejadii,Neolinocarpon rachidis,Nothophoma quercina,Peroneutypa scoparia,Pestalotiopsis aggestorum,Pilidium concavum,Plagiostoma salicellum,Protofenestella ulmi,Sarocladium kiliense,Tetraploa nagasakiensis and Vaginatispora armatispora).
基金financial support from European Funds through COMPETENational Funds through the Portuguese Foundation for Science and Technology(FCT)within projects PTDC/AGR-FOR/3807/2012-FCOMP-01-0124-FEDER-027979 and PEst-C/MAR/LA0017/2013+4 种基金supported by National Science Foundation Grant DBI 1046115supported by FFG,BMWFJ,BMVIT,ZIT,Zukunftsstiftung Tirol,and Land Steiermark within the Austrian COMET program FFG Grant 824186Financial support to JP was partially provided by the Polish Ministry of Science and Higher Education(MNiSW),grant no.NN303_548839financial support from FAPEMIG and CNPqfunded by the Government of Canada through Genome Canada and the Ontario Genomics Institute through the Biomonitoring 2.0 project(OGI-050).
文摘Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours.These taxa often have complex and poorly understood life cycles,lack observable,discriminatory morphological characters,and may not be amenable to in vitro culturing.As a result,species identification is frequently difficult.Molecular(DNA sequence)data have emerged as crucial information for the taxonomic identification of plant pathogenic fungi,with the nuclear ribosomal internal transcribed spacer(ITS)region being the most popular marker.However,international nucleotide sequence databases are accumulating numerous sequences of compromised or low-resolution taxonomic annotations and substandard technical quality,making their use in the molecular identification of plant pathogenic fungi problematic.Here we report on a concerted effort to identify high-quality reference sequences for various plant pathogenic fungi and to re-annotate incorrectly or insufficiently annotated public ITS sequences from these fungal lineages.A third objective was to enrich the sequences with geographical and ecological metadata.The results-a total of 31,954 changes-are incorporated in and made available through the UNITE database for molecular identification of fungi(http://unite.ut.ee),including standalone FASTA files of sequence data for local BLAST searches,use in the next-generation sequencing analysis platforms QIIME and mothur,and related applications.The present initiative is just a beginning to cover the wide spectrum of plant pathogenic fungi,and we invite all researchers with pertinent expertise to join the annotation effort.
基金Wen are grateful to The National Natural Science Foundation of China(No.31460012,No.31200016).
文摘Taxonomic names are key links between various databases that store information on different organisms.Several global fungal nomenclural and taxonomic databases(notably Index Fungorum,Species Fungorum and MycoBank)can be sourced to find taxonomic details about fungi,while DNA sequence data can be sourced from NCBI,EBI and UNITE databases.Although the sequence data may be linked to a name,the quality of the metadata is variable and generally there is no corresponding link to images,descriptions or herbarium material.There is generally no way to establish the accuracy of the names in these genomic databases,other than whether the submission is from a reputable source.To tackle this problem,a new database(FacesofFungi),accessible at www.facesoffungi.org(FoF)has been established.This fungal database allows deposition of taxonomic data,phenotypic details and other useful data,which will enhance our current taxonomic understanding and ultimately enable mycologists to gain better and updated insights into the current fungal classification system.In addition,the database will also allow access to comprehensive metadata including descriptions of voucher and type specimens.This database is user-friendly,providing links and easy access between taxonomic ranks,with the classification system based primarily on molecular data(from the literature and via updated web-based phylogenetic trees),and to a lesser extent on morphological data when molecular data are unavailable.In FoF species are not only linked to the closest phylogenetic representatives,but also relevant data is provided,wherever available,on various applied aspects,such as ecological,industrial,quarantine and chemical uses.The data include the three main fungal groups(Ascomycota,Basidiomycota,Basal fungi)and fungus-like organisms.The FoF webpage is an output funded by the Mushroom Research Foundation which is an NGO with seven directors with mycological expertise.The webpage has 76 curators,and with the help of these specialists,FoF will provide an updated natural classification of the fungi,with illustrated accounts of species linked to molecular data.The present paper introduces the FoF database to the scientific community and briefly reviews some of the problems associated with classification and identification of the main fungal groups.The structure and use of the database is then explained.We would like to invite all mycologists to contribute to these web pages.
基金the National Natural Science Foundation of China(Grant No.32200015)the Foundation of Guangzhou Municipal Science and Technology Bureau(Grant No.2023A04J1425)+46 种基金the Foundation of Guangzhou Municipal Science and Technology Bureau(Grant No.2023A04J1426)the National Research Council of Thailand(NRCT)Grant“Total fungal diversity in a given forest area with implications towards species numbers,chemical diversity and biotechnology”(Grant No.N42A650547)the Mushroom Research Foundation,Thailand for funding this workthe Distinguished Scientist Fellowship Program(DSFP),King Saud University,Kingdom of Saudi Arabia.Huang Zhang thanks the National Natural Science Foundation of Shandong(Project ID ZR2022MC071 to Huang Zhang)Taishan Scholar Foundation of Shandong Province(tsqn202306276)supported by the Sichuan Science and Technology Program of China(No.2022NSFSC1011)the Scientific and Technical Research Council of Türkiye(TUBİTAK)for the 2219 International Postdoctoral Research Fellowship Programme(Grant No.1059B192202880)the National Science,Research and Innovation Fund:Thailand Science Research Innovation(Basic Research Fund 2021,2022 and 2023)“Biodiversity,taxonomy,phylogeny and evolution of Colletotrichum on avocado,citrus,durian and mango in northern Thailand”,Grant No.652A01003“Biodiversity,taxonomy and phylogeny of Colletotrichum on Citrus and Mango in Northern Thailand,Grant No.662A01002 and 672A010002the National Natural Science Foundation of China(No.32060012)SERB(CRG/2020/006053),DST,New DelhiInstitution of Eminence(R/Dev./D/IoE/Incentive/2021-22/32387)BHU,Varanasi and Bridge Grant(No.SRICC/Bridge Grant/2024-25/3151),BHU,Varanasi for providing the financial supportsfinancially supported by the“Iranian Mycological Society”the National Natural Science Foundation of China(32260004)the Yunnan Revitalization Talents Support Plan(High-End Foreign Experts Program)Yunnan Provincial Department of Science and Technology“Zhihui Yunnan”Plan(202403AM140023)the Key Laboratory of Yunnan Provincial Department of Education of the Deep-Time Evolution on Biodiversity from the Origin of the Pearl River for their supportthe International Research Support Initiative Program(IRSIP)Schemegrateful to JSPS for an Award of a Postdoctoral Fellowship and the Research Grants No.185701000001 and No.18-06620Extramural Research-SERB,DST(EMR/2016/003078),Government of India for the financial assistancegrateful to‘The PCCF’of Tamil Nadu Forest Department for providing permission(E2/20458/2017),assistance and support during field visit in Eastern Ghats of Tamil NaduRUSA 2.0(Theme-1,Group-1/2021/49)for providing GrantTamil Nadu State Council for Higher Education,Chennai(RGP/2019-20/MU/HECP-0040)for financial assistanceCSIR,New Delhi,India(09/0115(13300)/2022-EMR-I)for the financial assistancethe Beijing Natural Science Foundation-International Scientist Project(Project Number 1S24085)for the financial supportgrateful to DST-PURSE Programme PhaseⅡ,University of Calcutta,India for financial supportChiang Mai University for providing financial support and laboratory facilitiesgrateful to the UP System Balik PhD Program(OVPAA-BPhD2022-02)Grant entitled“Unraveling the hidden diversity of aquatic fungi from Panay Island,Philippines”Govt.of India for financial assistance(BT/PR29521/FCB/125/15/2018)financial support provided by DGAPA-PAPIIT,UNAM(Grant Number IN203524)the Department of Science and Technology,Govt.of India for the Award of the JC Bose Fellowship(Grant No.JCB/2017/000053),DBT-BUILDER(BT/INF/22/SP41176/2020)grant to School of life Sciences,Ministry of EducationGovt.of India and Institution of Excellence Directorate,University of Hyderabad for the award of the Project(Grant No.UOH-IOE-RC3-21-065)and Fellowship(RA)to PVSRN Sarmathe IOE-PDRF(UOH/IOE/SEST/PDRF/1)Grant from University of Hyderabadthe Yunnan Provincial Department of Science and Technology“Zhihui Yunnan”Plan(202403AM140023)the High-Level Talent Recruitment Plan of Yunnan Provinces(High-End Foreign Experts Programs and“Young Talents”)the National Natural Science Foundation of China(No.32460002)the Meemann Chang Academician Workstation in Yunnan Province(202225AF150002)Yunnan Province Young and Middle-aged Academic and Technical Leaders Reserve Talents Program(202305AC350252)Fundacao Arthur Bernardes(FUNARBE)for financial support.the CMU Proactive Researcher,Chiang Mai University(Grant Numbers 796/2567 and EX010059)the Doi Tung Development Project for Sample Collection(Permission Number 7700/17142 with the title‘The diversity of saprobic fungi on selected hosts in forest northern Thailand’),Chiang Rai,ThailandChiang Mai University for partially supportthe support from the Agency of Innovative Development under the Ministry of Higher Education,Science and Innovation of the Republic of Uzbekistan(Project No.AL-8724052922)the National Key R&D Program of China(Project No.2025YFE0104500)The Slovak Grant Agency VEGA(grant No.1/0295/20)for financial supportfinancial support from the Institute of Botany,Jagiellonian University,scientific funds(N18/DBS/000002)financial support by the statutory funds of the W.Szafer Institute of Botany,Polish Academy of Sciences.
文摘This article is the 19th contribution to the fungal diversity notes series,in which 106 taxa distributed in 3 phyla,11 classes,35 orders,and 64 families are treated.Taxa described in the present study include a new family,5 new genera,69 new species,3 new combinations,25 new host,habitat,and geographical records,a new name,a new collection,as well as reinstating a previously suppressed genus.The newly established family is Parasporidesmiaceae and the five new genera described herein are Dematiodidymosporum,Neoacrogenospora,Parasporidesmium,Speluncomyces,and Uniomyces.The 69 new species are Acrocalymma triseptatum,Agaricus darjeelingensis,Annellophorella aquatica,Anteaglonium menghaiense,Balsamia microspora,Bambusicola dehongensis,Barriopsis menglaense,Benjaminiomyces bergonzoi,Camporesiomyces aquaticus,Camporesiomyces wurfbainiae,Cercospora palmata,Chrysomphalina cantharella,Colletotrichum heteropanacicola,Conioscypha guizhouensis,Conioscypha yadongensis,Cora dalfornoae,Cylindromonium brasiliense,Dematiodidymosporum aquaticum,Distoseptispora dinghuensis,Distoseptispora zunyiensis,Ebollia neocarnea,Eudimeromyces aequatorialis,Eudimeromyces euconni,Funalia indica,Fuscosporella ovalis,Fuscosporella yunnanensis,Halobasidium csapodyae,Halokirschsteiniothelia hunanensis,Hongkongmyces xishuangbannaensis,Inocybe ispartaensis,Laboulbenia neofrancoisiana,Lachnella kunmingensis,Lasmenia thailandica,Leptospora cannabini,Lycoperdon sridharii,Myxospora neomasonii,Natipusilla aquatica,Neoacrogenospora aquatica,Neomassaria sinensis,Neovaginatispora juglandis,Niesslia yunnanensis,Ophiocordyceps aseptatospora,Oxneriaria sheosarensis,Paramicrosphaeropsis vitis,Paramyrothecium strychni,Parapaucispora aquatica,Parasporidesmium aquaticum,Parmelia neosaxatilis,Periconia bambusicola,Periconia neohongheensis,Peroneutypa thailandica,Polyozellus albus,Porina magnoliae,Porostereum subspadiceum,Pseudosperma subvolvatum,Pseudothyridariella caseariae,Rhexocercosporidium ferulae,Russula rubroglutinata,Septoriella iranica,Seriascoma asexuale,Sesquicillium flavum,Sirastachys zhongkaiensis,Speluncomyces lunatus,Sporidesmiella yunnanensis,Striaticonidium xishuangbannaensis,Trametopsis indica,Tulostoma hyderabadensis,Uniomyces hakkeijimanus,and Virgaria guizhouensis.The three new combinations are Lycoperdon alpinum,Lycoperdon lloydii,and Lycoperdon macrogemmae.The 25 new records comprise Acremonium sclerotigenum,Agroathelia rolfsii,Alfaria terrestris,Aspergillus cejpii,Colletotrichum brevisporum,Coriolopsis brunneoleuca,Coriolopsis hainanensis,Cytospora tamaricicola,Fomitopsis malicola,Fulvifomes fastuosus,Fulvifomes thailandicus,Funalia cystidiata,Funalia subgallica,Longididymella vitalbae,Lopharia mirabilis,Metarhizium viridulum,Neopestalotiopsis haikouensis,Occultibambusa aquatica,Phaeoacremonium scolyti,Phaeocytostroma virdimurae,Puccinia mysuruensis,Rhizopus stolonifer,Serpula similis,Trametes ellipsospora,and Vamsapriya shiwandashanensis.In addition,the new name is Irpiciporus pseudoxuchilensis,and the new collection is Aspergillus sydowii.The previously suppressed genus Eudimeromyces has been taxonomically reinstated.
