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Impacts of geography,climate,soil properties and vegetation characteristics on soil C:N and N:P stoichiometry across the Qinghai-Tibetan Plateau
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作者 Wenlan FENG Pierre MARIOTTE +5 位作者 Jun GU Xiaodong SONG Jinling YANG Fei YANG Yuguo ZHAO Ganlin ZHANG 《Pedosphere》 2025年第5期901-913,共13页
Soil organic carbon(SOC):total nitrogen(TN):total phosphorus(TP)(C:N:P)stoichiometry can give important information about biogeochemical cycling in terrestrial ecosystems.The spatial patterns and driving mechanisms of... Soil organic carbon(SOC):total nitrogen(TN):total phosphorus(TP)(C:N:P)stoichiometry can give important information about biogeochemical cycling in terrestrial ecosystems.The spatial patterns and driving mechanisms of soil C:N:P ratios are still poorly understood on the Qinghai-Tibetan Plateau of China.In this study,we therefore combined data of the geography,climate,soil properties,and vegetation characteristics from 319 sites across the plateau to investigate their relationships with the horizontal and vertical patterns of SOC,TN,and TP concentrations and their stoichiometric ratios(C:N and N:P).We observed higher SOC(30.5–46.8 mg g^(-1)),TN(2.4–3.4 mg g^(-1)),C:N(14.7–18.0),and N:P(6.9–8.0)in alpine meadows,forests,and shrublands and higher TP(1.6 mg g^(-1))in croplands.Overall,SOC,TN,TP,C:N,and N:P showed decreasing trends(by 67%,64%,19%,12%,and 54%,respectively)along the whole soil profile(0–100 cm).Soil cation exchange capacity and bulk density were the stronger environmental drivers of SOC and TN.Soil TP showed latitudinal and longitudinal increasing trends in all soil layers.Soil properties explained most of the variations in SOC(67%–90%),TN(67%–87%),C:N(61%–89%),and N:P(64%–85%),with increasing impacts along the soil profile.Geography and climate influenced soil TP directly and indirectly through their impacts on soil properties,with geography being the predominant driver(46%–65%)along the soil profile.The variation in soil C:N was mostly driven by SOC and TN,and the direct and indirect effects of the environmental factors were relatively weak.Geography,climate,soil properties,and vegetation characteristics indirectly impacted soil N:P through their impacts on TN and TP in all the soil layers.Altogether,our findings illuminate the relative contributions of geography,climate,soil properties,and vegetation characteristics to soil C:N and N:P,thus enhancing our understanding of C,N,and P cycling across the Qinghai-Tibetan Plateau. 展开更多
关键词 alpine meadow mean annual temperature nutrient stoichiometry plant cover soil depth soil organic carbon soil total nitrogen soil total phosphorus
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Mycorrhizal fungi mitigate nitrogen losses of an experimental grassland by facilitating plant uptake and soil microbial immobilization
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作者 Yangyang JIA Marcel G.A.VAN DER HEIJDEN +2 位作者 Alain Y.VALZANO-HELD Markus JOCHER Florian WALDER 《Pedosphere》 SCIE CAS CSCD 2024年第2期399-410,共12页
Nitrogen(N)is one of the most limited nutrients of terrestrial ecosystems,whose losses are prevented in tightly coupled cycles in finely tuned systems.Global change-induced N enrichment through atmospheric deposition ... Nitrogen(N)is one of the most limited nutrients of terrestrial ecosystems,whose losses are prevented in tightly coupled cycles in finely tuned systems.Global change-induced N enrichment through atmospheric deposition and application of vast amounts of fertilizer are now challenging the terrestrial N cycle.Arbuscular mycorrhizal fungi(AMF)are known drivers of plant-soil nutrient fluxes,but a comprehensive assessment of AMF involvement in N cycling under global change is still lacking.Here,we simulated N enrichment by fertilization(low/high)in experimental grassland microcosms under greenhouse conditions in the presence or absence of AMF and continuously monitored different N pathways over nine months.We found that high N enrichment by fertilization decreased the relative abundance of legumes and the plant species dominating the plant community changed from grasses to forbs in the presence of AMF,based on aboveground biomass.The presence of AMF always maintained plant N:phosphorus(P)ratios between 14 and 16,no matter how the soil N availability changed.Shifts in plant N:P ratios due to the increased plant N and P uptake might thus be a primary pathway of AMF altering plant community composition.Furthermore,we constructed a comprehensive picture of AMF’s role in N cycling,highlighting that AMF reduced N losses primarily by mitigating N leaching,while N_(2)O emissions played a marginal role.Arbuscular mycorrhizal fungi reduced N_(2)O emissions directly through the promotion of N_(2)O-consuming denitrifiers.The underlying mechanism for reducing N leaching is mainly the AMF-mediated improved nutrient uptake and AMF-associated microbial immobilization.Our results indicate that synergies between AMF and other soil microorganisms cannot be ignored in N cycling and that the integral role of AMF in N cycling terrestrial ecosystems can buffer the upcoming global changes. 展开更多
关键词 N cycling N enrichment N uptake N:P ratio plant community structure symbiotic soil fungi
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Mycorrhizae and sustainable soil solutions
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作者 Junli HU Fayuan WANG +2 位作者 Junling ZHANG Liangdong GUO Marcel G.A.VAN DER HEIJDEN 《Pedosphere》 SCIE CAS CSCD 2024年第2期267-268,共2页
Mycorrhizae are the most widespread symbioses in nature,involving plants and specialized soil fungi.In recent years,mycorrhizal research has made remarkable progress.Breakthroughs in genomics and other modern techniqu... Mycorrhizae are the most widespread symbioses in nature,involving plants and specialized soil fungi.In recent years,mycorrhizal research has made remarkable progress.Breakthroughs in genomics and other modern techniques have opened new windows in multiple domains,such as evolution,physiology,and function of mycorrhizal fungi. 展开更多
关键词 SOIL specialized SUSTAINABLE
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影响五倍子水悬浮液对马铃薯晚疫病田间防治效果的主要气象因素 被引量:4
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作者 胡同乐 王树桐 +3 位作者 闫峰 杨军玉 Hans-Rudolf Forrer 曹克强 《植物病理学报》 CAS CSCD 北大核心 2008年第6期619-625,共7页
将4.0%五倍子水悬浮液喷施田间马铃薯品种Bintje的叶片,于不同处理时间后,剪下叶片带回室内人工接种致病疫霉孢子囊悬浮液,保湿培养后调查各处理的发病情况。结果表明,喷施五倍子水悬浮液后48h内未经历降雨的处理,病情指数仅为7.41,与... 将4.0%五倍子水悬浮液喷施田间马铃薯品种Bintje的叶片,于不同处理时间后,剪下叶片带回室内人工接种致病疫霉孢子囊悬浮液,保湿培养后调查各处理的发病情况。结果表明,喷施五倍子水悬浮液后48h内未经历降雨的处理,病情指数仅为7.41,与清水对照相比,防效为92.59%;喷施后96h接种的处理,由于在田间经历了降雨,完全丧失了防效,病情指数达100。室内毒力测定结果显示,0.4%五倍子水悬浮液喷施96h后,对致病疫霉游动孢子释放的抑制率仍在80%以上,在室外避雨不避光条件下五倍子水悬浮液96h内抑菌效果无显著降低,表明日光的影响作用较小。在室内盆栽条件下,通过喷淋水滴模拟田间降雨对药液的冲刷作用。结果表明,冲刷作用可导致五倍子水悬浮液对马铃薯晚疫病的防效显著降低。进一步说明,降雨是导致五倍子水悬浮液对马铃薯晚疫病田间防治效果降低的主要气象因素。 展开更多
关键词 五倍子 致病疫霉 马铃薯晚疫病 气象因素 降雨
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养分添加对青藏高原高寒草甸丛枝菌根真菌的影响 被引量:6
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作者 黄园园 OLBRECH TLuise +1 位作者 杨晓霞 贺金生 《北京大学学报(自然科学版)》 EI CAS CSCD 北大核心 2014年第5期911-918,共8页
基于海北站的养分添加实验平台探讨养分输入对青藏高原高寒草甸丛枝菌根真菌(AMF)的影响。实验处理包括:1)对照;2)10 gN/(m2·a)的氮添加;3)5 gP/(m2·a)的磷添加;4)10 gK/(m2·a)的钾添加。利用醋酸墨水染色法定量分析各... 基于海北站的养分添加实验平台探讨养分输入对青藏高原高寒草甸丛枝菌根真菌(AMF)的影响。实验处理包括:1)对照;2)10 gN/(m2·a)的氮添加;3)5 gP/(m2·a)的磷添加;4)10 gK/(m2·a)的钾添加。利用醋酸墨水染色法定量分析各处理下植物根系的AMF侵染率。结果表明,氮添加使总的AMF侵染率显著减少27%,但对AMF的丛枝丰度和囊泡多度无显著影响;磷添加和钾添加对AMF均无显著影响,但是磷添加使AMF侵染率有降低趋势。可以得到,不同养分添加对高寒草甸植物与AMF的共生关系具有不同影响,由此可能会引起物种组成等一系列的变化,影响生态系统结构和功能,因此在评估养分添加效应时应该考虑其对AMF的影响。 展开更多
关键词 高寒草甸 丛枝菌根真菌(AMF) 养分添加 AMF侵染率
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Precise Agriculture:Effective Deep Learning Strategies to Detect Pest Insects 被引量:5
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作者 Luca Butera Alberto Ferrante +2 位作者 Mauro Jermini Mauro Prevostini Cesare Alippi 《IEEE/CAA Journal of Automatica Sinica》 SCIE EI CSCD 2022年第2期246-258,共13页
Pest insect monitoring and control is crucial to ensure a safe and profitable crop growth in all plantation types,as well as guarantee food quality and limited use of pesticides.We aim at extending traditional monitor... Pest insect monitoring and control is crucial to ensure a safe and profitable crop growth in all plantation types,as well as guarantee food quality and limited use of pesticides.We aim at extending traditional monitoring by means of traps,by involving the general public in reporting the presence of insects by using smartphones.This includes the largely unexplored problem of detecting insects in images that are taken in noncontrolled conditions.Furthermore,pest insects are,in many cases,extremely similar to other species that are harmless.Therefore,computer vision algorithms must not be fooled by these similar insects,not to raise unmotivated alarms.In this work,we study the capabilities of state-of-the-art(SoA)object detection models based on convolutional neural networks(CNN)for the task of detecting beetle-like pest insects on nonhomogeneous images taken outdoors by different sources.Moreover,we focus on disambiguating a pest insect from similar harmless species.We consider not only detection performance of different models,but also required computational resources.This study aims at providing a baseline model for this kind of tasks.Our results show the suitability of current SoA models for this application,highlighting how FasterRCNN with a MobileNetV3 backbone is a particularly good starting point for accuracy and inference execution latency.This combination provided a mean average precision score of 92.66%that can be considered qualitatively at least as good as the score obtained by other authors that adopted more specific models. 展开更多
关键词 Computer vision machine learning neural network pest insect pest monitoring Popillia japonica precise agriculture
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Impact of dietary L-arginine supply during early gestation on myofiber development in newborn pigs exposed to intra-uterine crowding 被引量:4
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作者 Johannes Gulmann Madsen Camilo Pardo +1 位作者 Michael Kreuzer Giuseppe Bee 《Journal of Animal Science and Biotechnology》 SCIE CAS CSCD 2017年第4期945-956,共12页
Background: Intra-uterine crowding(IUC) observed in hyperprolific sows impairs myofiber hyperplasia and overall fetal growth. Arginine supplementation(ARG) in gestation diets has been shown to positively affect litter... Background: Intra-uterine crowding(IUC) observed in hyperprolific sows impairs myofiber hyperplasia and overall fetal growth. Arginine supplementation(ARG) in gestation diets has been shown to positively affect litter and muscle development. The study objective was to assess whether the effect of ARG on offspring characteristics, with special emphasis on myofiber hyperplasia, differs under IUC conditions from these responses,because in that situation growth retardation is particularly prevalent due to reduced fetal nutrient supply.Unilateral oviduct ligation(OL) was used as a model for an uncrowded and hyperprolificacy(IN) as a model for a crowded intra-uterine environment.Methods: Five OL and five IN sows were fed a diet supplemented daily with either 43 g L-alanine(Ctrl) or 25 g L-arginine from d 14 to 28 of gestation in a cross-over design(two periods: 5^( th) and 6^( th) parity). At farrowing, two male and two female offspring, respectively, with a low and intermediate birth weight(BtW) were selected. After euthanization, the Semitendinosus muscle(STM) was removed and weighed, and the light and dark portions(STM_d and STM_l) were prepared for myofiber histochemistry using ATPase staining and the entire STM for gene expression analysis of myogenesis-related genes using RT-qPCR. In addition, various organs were removed and weighed. Data were analyzed using the MIXED model in SYSTAT.Results: No effect of either IUC or dietary treatment was found in litter characteristics. Offspring of ARG sows displayed a greater muscle area in STM(P < 0.01) as a result of the greater myofiber hyperplasia(P < 0.01). The increase was more distinct in the STM_l(P < 0.05) than in the STM_d(P = 0.131). Offspring of OL sows were heavier at birth(P < 0.01), had a heavier STM(P < 0.05), liver(P < 0.01) and kidney(P < 0.05), but when expressed relative to birth weight, these differences were absent. In addition, IUC had an effect(P < 0.05) on the expression of one of the myogenesis-related genes investigated.Conclusions: Independent from the extent of IUC, ARG improved Bt W, muscle and organ weights and myofiber hyperplasia in offspring. 展开更多
关键词 DIETARY supplement EARLY GESTATION Intra-uterine growth restriction MYOFIBER hyperplasia Neonate Sow prolificacy
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Grazing Management Plans improve pasture selection by cattle and forage quality in sub-alpine and alpine grasslands 被引量:2
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作者 Marco PITTARELLO Massimiliano PROBO +3 位作者 Elisa PEROTTI Michele LONATI Giampiero LOMBARDI Simone RAVETTO ENRI 《Journal of Mountain Science》 SCIE CSCD 2019年第9期2126-2135,共10页
Over the last decades, the reduction of manpower for herd management has led to an increase of continuous grazing systems(CGS) in the Italian Alps, which allow cattle to roam freely. Under CGS, due to high selectivity... Over the last decades, the reduction of manpower for herd management has led to an increase of continuous grazing systems(CGS) in the Italian Alps, which allow cattle to roam freely. Under CGS, due to high selectivity, livestock exploit grasslands unevenly, over-and under-using specific areas at the same time with negative effects on their conservation. To counteract these effects, a specific policy and management tool(i.e. Grazing Management Plan) has been implemented by Piedmont Region since 2010. The Grazing Management Plans are based on the implementation of rotational grazing systems(RGS), with animal stocking rate adjusted to balance it with grassland carrying capacity. A case study was conducted on alpine summer pastures to test the 5-year effects produced by the implementation of a Grazing Management Plan in grasslands formerly managed under several years of CGS on 1) the selection for different vegetation communities by cattle, 2) the abundance of oligo-, meso-, and eutrophic plant species(defined according to Landolt N indicator value), and 3) forage yield, quality, and palatability. A total of 193 vegetation surveys were carried out in 2011 and repeated in 2016. Cows were tracked yearly with Global Positioning System collars to assess their grazing selectivity, and forage Pastoral Value(PV) was computed to evaluate forage yield, quality, and palatability. Five years after RGS implementation, cow selectivity significantly decreased and the preference for the different vegetation communities was more balanced than under CGS. The abundance of meso-and eutrophic species increased, whereas oligotrophic ones decreased. Moreover, the abundance of moderately to highly palatable plant species increased, whereas non-palatable plant species decreased, with a consequent significant enhancement of the PV. Our findings indicate that the implementation of Grazing Management Plans can be considered a sustainable and effective management tool for improving pasture selection by cattle and forage quality in mountain pastures. 展开更多
关键词 MOUNTAIN GPS tracking Agricultural policies LIVESTOCK PASTORAL Value Vegetation community
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Genomic prediction of fruit texture and training population optimization towards the application of genomic selection in apple 被引量:6
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作者 Morgane Roth Hélène Muranty +3 位作者 Mario Di Guardo Walter Guerra Andrea Patocchi Fabrizio Costa 《Horticulture Research》 SCIE 2020年第1期889-902,共14页
Texture is a complex trait and a major component of fruit quality in apple.While the major effect of MdPG1,a gene controlling firmness,has already been exploited in elite cultivars,the genetic basis of crispness remai... Texture is a complex trait and a major component of fruit quality in apple.While the major effect of MdPG1,a gene controlling firmness,has already been exploited in elite cultivars,the genetic basis of crispness remains poorly understood.To further improve fruit texture,harnessing loci with minor effects via genomic selection is therefore necessary.In this study,we measured acoustic and mechanical features in 537 genotypes to dissect the firmness and crispness components of fruit texture.Predictions of across-year phenotypic values for these components were calculated using a model calibrated with 8,294 SNP markers.The best prediction accuracies following cross-validations within the training set of 259 genotypes were obtained for the acoustic linear distance(0.64).Predictions for biparental families using the entire training set varied from low to high accuracy,depending on the family considered.While adding siblings or half-siblings into the training set did not clearly improve predictions,we performed an optimization of the training set size and composition for each validation set.This allowed us to increase prediction accuracies by 0.17 on average,with a maximal accuracy of 0.81 when predicting firmness in the‘Gala’בPink Lady’family.Our results therefore identified key genetic parameters to consider when deploying genomic selection for texture in apple.In particular,we advise to rely on a large training population,with high phenotypic variability from which a‘tailored training population’can be extracted using a priori information on genetic relatedness,in order to predict a specific target population. 展开更多
关键词 PREDICTION OPTIMIZATION FIR
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Optimizing the use of open chambers to measure ammonia volatilization in field plots amended with urea 被引量:1
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作者 Márcio R.MARTINS Leonardo F.SARKIS +9 位作者 Selenobaldo A.C.SANT’ANNA Camila A.SANTOS Karla E.ARAUJO Ricardo C.SANTOS Ednaldo S.ARAÚJO Bruno J.R.ALVES Claudia P.JANTALIA Robert M.BODDEY Mohammad ZAMAN Segundo URQUIAGA 《Pedosphere》 SCIE CAS CSCD 2021年第2期243-254,共12页
Measuring ammonia(NH_(3))volatilization from urea-fertilized soils is crucial for evaluation of practices that reduce gaseous nitrogen(N)losses in agriculture.The small area of chambers used for NH_(3)volatilization m... Measuring ammonia(NH_(3))volatilization from urea-fertilized soils is crucial for evaluation of practices that reduce gaseous nitrogen(N)losses in agriculture.The small area of chambers used for NH_(3)volatilization measurements compared with the size of field plots may cause significant errors if inadequate sampling strategies are adopted.Our aims were:i)to investigate the effect of using multiple open chambers on the variability in the measurement of NH_(3)volatilization in urea-amended field plots and ii)to define the critical period of NH_(3)-N losses during which the concentration of sampling effort is capable of reducing uncertainty.The use of only one chamber covering 0.015%of the plot(51.84 m^(2))generates a value of NH_(3)-N loss within an expected margin of error of 30%around the true mean.To reduce the error margin by half(15%),3–7 chambers were required with a mean of 5 chambers per plot.Concentrating the sampling efforts in the first two weeks after urea application,which is usually the most critical period of N losses and associated errors,represents an efficient strategy to lessen uncertainty in the measurements of NH_(3)volatilization.This strategy enhances the power of detection of NH_(3)-N loss abatement in field experiments using chambers. 展开更多
关键词 chamber method experimental error gas emission low-cost chamber nitrogen cycling nitrogen loss soil variability
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Apple whole genome sequences:recent advances and new prospects 被引量:3
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作者 Cameron P.Peace Luca Bianco +24 位作者 Michela Troggio Eric van de Weg Nicholas P.Howard Amandine Cornille Charles-Eric Durel Sean Myles ZoëMigicovsky Robert J.Schaffer Evelyne Costes Gennaro Fazio Hisayo Yamane Steve van Nocker Chris Gottschalk Fabrizio Costa David Chagné Xinzhong Zhang Andrea Patocchi Susan E.Gardiner Craig Hardner Satish Kumar Francois Laurens Etienne Bucher Dorrie Main Sook Jung Stijn Vanderzande 《Horticulture Research》 SCIE 2019年第1期1247-1270,共24页
In 2010,a major scientific milestone was achieved for tree fruit crops:publication of the first draft whole genome sequence(WGS)for apple(Malus domestica).This WGS,v1.0,was valuable as the initial reference for sequen... In 2010,a major scientific milestone was achieved for tree fruit crops:publication of the first draft whole genome sequence(WGS)for apple(Malus domestica).This WGS,v1.0,was valuable as the initial reference for sequence information,fine mapping,gene discovery,variant discovery,and tool development.A new,high quality apple WGS,GDDH13 v1.1,was released in 2017 and now serves as the reference genome for apple.Over the past decade,these apple WGSs have had an enormous impact on our understanding of apple biological functioning,trait physiology and inheritance,leading to practical applications for improving this highly valued crop.Causal gene identities for phenotypes of fundamental and practical interest can today be discovered much more rapidly.Genome-wide polymorphisms at high genetic resolution are screened efficiently over hundreds to thousands of individuals with new insights into genetic relationships and pedigrees.High-density genetic maps are constructed efficiently and quantitative trait loci for valuable traits are readily associated with positional candidate genes and/or converted into diagnostic tests for breeders.We understand the species,geographical,and genomic origins of domesticated apple more precisely,as well as its relationship to wild relatives.The WGS has turbo-charged application of these classical research steps to crop improvement and drives innovative methods to achieve more durable,environmentally sound,productive,and consumer-desirable apple production.This review includes examples of basic and practical breakthroughs and challenges in using the apple WGSs.Recommendations for“what’s next”focus on necessary upgrades to the genome sequence data pool,as well as for use of the data,to reach new frontiers in genomics-based scientific understanding of apple. 展开更多
关键词 BREAKTHROUGH hundreds FRONTIER
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An integrated approach for increasing breeding efficiency in apple and peach in Europe 被引量:10
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作者 Francois Laurens Maria JoséAranzana +19 位作者 Pere Arus Daniele Bassi Marco Bink Joan Bonany Andrea Caprera Luca Corelli-Grappadelli Evelyne Costes Charles-Eric Durel Jehan-Baptiste Mauroux Hélène Muranty Nelson Nazzicari Thierry Pascal Andrea Patocchi Andreas Peil Bénédicte Quilot-Turion Laura Rossini Alessandra Stella Michela Troggio Riccardo Velasco Eric van de Weg 《Horticulture Research》 SCIE 2018年第1期825-838,共14页
Despite the availability of whole genome sequences of apple and peach,there has been a considerable gap between genomics and breeding.To bridge the gap,the European Union funded the FruitBreedomics project(March 2011 ... Despite the availability of whole genome sequences of apple and peach,there has been a considerable gap between genomics and breeding.To bridge the gap,the European Union funded the FruitBreedomics project(March 2011 to August 2015)involving 28 research institutes and private companies.Three complementary approaches were pursued:(i)tool and software development,(ii)deciphering genetic control of main horticultural traits taking into account allelic diversity and(iii)developing plant materials,tools and methodologies for breeders.Decisive breakthroughs were made including the making available of ready-to-go DNA diagnostic tests for Marker Assisted Breeding,development of new,dense SNP arrays in apple and peach,new phenotypic methods for some complex traits,software for gene/QTL discovery on breeding germplasm via Pedigree Based Analysis(PBA).This resulted in the discovery of highly predictive molecular markers for traits of horticultural interest via PBA and via Genome Wide Association Studies(GWAS)on several European genebank collections.FruitBreedomics also developed pre-breeding plant materials in which multiple sources of resistance were pyramided and software that can support breeders in their selection activities.Through FruitBreedomics,significant progresses were made in the field of apple and peach breeding,genetics,genomics and bioinformatics of which advantage will be made by breeders,germplasm curators and scientists.A major part of the data collected during the project has been stored in the FruitBreedomics database and has been made available to the public.This review covers the scientific discoveries made in this major endeavour,and perspective in the apple and peach breeding and genomics in Europe and beyond. 展开更多
关键词 BREEDING GERMPLASM BREED
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The apple REFPOP—a reference population for genomics-assisted breeding in apple 被引量:3
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作者 Michaela Jung Morgane Roth +19 位作者 Maria JoséAranzana Annemarie Auwerkerken Marco Bink Caroline Denancé Christian Dujak Charles-Eric Durel Carolina Font i Forcada Celia M.Cantin Walter Guerra Nicholas P.Howard Beat Keller Mariusz Lewandowski Matthew Ordidge Marijn Rymenants Nadia Sanin Bruno Studer Edward Zurawicz François Laurens Andrea Patocchi Hélène Muranty 《Horticulture Research》 SCIE 2020年第1期364-379,共16页
Breeding of apple is a long-term and costly process due to the time and space requirements for screening selection candidates.Genomics-assisted breeding utilizes genomic and phenotypic information to increase the sele... Breeding of apple is a long-term and costly process due to the time and space requirements for screening selection candidates.Genomics-assisted breeding utilizes genomic and phenotypic information to increase the selection efficiency in breeding programs,and measurements of phenotypes in different environments can facilitate the application of the approach under various climatic conditions.Here we present an apple reference population:the apple REFPOP,a large collection formed of 534 genotypes planted in six European countries,as a unique tool to accelerate apple breeding.The population consisted of 269 accessions and 265 progeny from 27 parental combinations,representing the diversity in cultivated apple and current European breeding material,respectively.A high-density genome-wide dataset of 303,239 SNPs was produced as a combined output of two SNP arrays of different densities using marker imputation with an imputation accuracy of 0.95.Based on the genotypic data,linkage disequilibrium was low and population structure was weak.Two well-studied phenological traits of horticultural importance were measured.We found marker–trait associations in several previously identified genomic regions and maximum predictive abilities of 0.57 and 0.75 for floral emergence and harvest date,respectively.With decreasing SNP density,the detection of significant marker–trait associations varied depending on trait architecture.Regardless of the trait,10,000 SNPs sufficed to maximize genomic prediction ability.We confirm the suitability of the apple REFPOP design for genomics-assisted breeding,especially for breeding programs using related germplasm,and emphasize the advantages of a coordinated and multinational effort for customizing apple breeding methods in the genomics era. 展开更多
关键词 BREEDING planted utilize
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Alpine tundra species phenology is mostly driven by climate-related variables rather than by photoperiod
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作者 QUAGLIA Elena RAVETTO ENRI Simone +3 位作者 PEROTTI Elisa PROBO Massimiliano LOMBARDI Giampiero LONATI Michele 《Journal of Mountain Science》 SCIE CSCD 2020年第9期2081-2096,共16页
The study of plant phenology has frequently been used to link phenological events to various factors,such as temperature or photoperiod.In the high-alpine environment,proper timing of the phenological cycle has always... The study of plant phenology has frequently been used to link phenological events to various factors,such as temperature or photoperiod.In the high-alpine environment,proper timing of the phenological cycle has always been crucial to overcome harsh conditions and potential extreme events(i.e.spring frosts)but little is known about the response dynamics of the vegetation,which could shape the alpine landscape in a future of changing climate.Alpine tundra vegetation is composed by an array of species belonging to different phytosociological optima and with various survival strategies,and snowbed communities are a relevant expression of such an extreme-climate adapted flora.We set eight permanent plots with each one in a snowbed located on the Cimalegna plateau in Northwestern Italy and then we selected 10 most recurring species among our plots,all typical of the alpine tundra environment and classified in 3different pools:snowbed specialists,grassland species and rocky debris species.For 3 years we registered the phenophases of each species during the whole growing season using an adaptation of the BBCH scale.We later focused on the three most biologically relevant phenophases,i.e.,flower buds visible,full flowering,and beginning of seed dispersion.Three important season-related variables were chosen to investigate their relationship with the phenological cycle of the studied species:(i)the Day Of Year(DOY),the progressive number of days starting from the 1 st of January,used as a proxy of photoperiod,(ii)Days From Snow Melt(DFSM),selected to include the relevance of the snow dynamics,and(iii)Growing Degree Days(GDD),computed as a thermal sum.Our analysis highlighted that phenological development correlated better with DFSM and GDD than with DOY.Indeed,models showed that DOY was always a worse predictor since it failed to overcome interannual variations,while DFSM and marginally GDD were better suited to predict the phenological development of most of the species,despite differences intemperature and snowmelt date among the three years.Even if the response pattern to the three variables was mainly consistent for all the species,the timing of their phenological response was different.Indeed,species such as Salix herbacea and Ranunculus glacialis were always earlier in the achievement of the phenophases,while Agrostis rupestris and Euphrasia minima developed later and the remaining species showed an intermediate behavior.However,we did not detect significant differences among the three functional pools of species. 展开更多
关键词 Alpine plants Climate change Growing degree days Italian Alps Salix herbacea Snowbed vegetation
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A simple and easy method to measure ammonia volatilization:Accuracy under field conditions
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作者 Márcio R.MARTINS Leonardo F.SARKIS +8 位作者 Roni F.GUARESCHI Camila A.SANTOS Selenobaldo A.C.SANT’ANNA Mohammad ZAMAN Claudia P.JANTALIA Bruno J.R.ALVES Robert M.BODDEY Ednaldo S.ARAÚJO Segundo URQUIAGA 《Pedosphere》 SCIE CAS CSCD 2021年第2期255-264,共10页
Field studies on soil ammonia(NH_(3))volatilization are restricted in many countries owing to the high costs commonly demanded for accurate quantification.We assessed the accuracy of a simple,open chamber design to ca... Field studies on soil ammonia(NH_(3))volatilization are restricted in many countries owing to the high costs commonly demanded for accurate quantification.We assessed the accuracy of a simple,open chamber design to capture NH_(3)under field conditions,as affected by different chamber placement schemes.Urea-15 N was surface applied to lysimeters installed in the spaces between maize rows.Open chambers made from plastic bottles were installed on each lysimeter with variations in i)N rates(3,8,13,and 18 g m^(-2)),ii)the height of the chamber above the soil surface(0,5,and 10 mm),and iii)chamber relocation(static vs.dynamic).Reference lysimeters without chambers were used to measure NH_(3)losses by^(15)N-balance.Losses of NH_(3)-N accounted for more than 50%of the applied N.Relocation of the chambers had no impact on their NH_(3)-trapping efficiencies,proving to be an unnecessary procedure.Variation in the height of the chambers above the soil surface affected the capture of NH_(3),but the results still maintained high linearity with the NH_(3)losses quantified by the reference method(R^(2)>0.98).When the same placement scheme used in the introductory study describing the chamber was utilized(static and touching the soil surface),we found a trapping efficiency of 60%,which was very similar to that(57%)obtained in the previous study.Our results show that this simple,open chamber design can be used with satisfactory accuracy under field conditions,provided that simple,standardized procedures are warranted. 展开更多
关键词 ammonia collector chamber method field sampler gas emission low-cost chamber nitrogen cycling
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Seed Protein Electrophoresis for Assessment of Genetic Diversity among Festuca pratensis Huds, Local Ecotypes
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作者 S. D. Stoyanova B. Boller +1 位作者 Y. K. Guteva S. A. Angelova 《Journal of Agricultural Science and Technology(B)》 2011年第8期1176-1183,共8页
Fifty two accessions of Festuca pratensis Huds. were analysed of which 18 had been collected in Switzerland and 32 in Bulgaria. SDS-PAGE of seed proteins was implemented to detect genetic variation among ecotype popul... Fifty two accessions of Festuca pratensis Huds. were analysed of which 18 had been collected in Switzerland and 32 in Bulgaria. SDS-PAGE of seed proteins was implemented to detect genetic variation among ecotype populations using a modification of UPOV method for barley. The modification concerns mainly protein extracting procedure as detailed described in the protocol. The two cultivars Preval and Cosmolit were used as standards. Cluster analyses and correspondence analyses/scatter plot were used as statistic approaches for determining genetic diversity among individual ecotypes and groups of ecotypes. Electrophoretic spectra of proteins show clear differences among local accessions in relation to their origin. In Swiss ecotypes 32 protein fragments were determined whereas in Bulgarian local populations their number was 68. Each of the two eco-groups possesses fragments that appear in all accessions of the group. The number of monomorphic bands within Bulgarian local ecotypes is four whereas their number in Swiss ecotypes is 12. Four monomorphic bands appearing in all proteinograms no difference of eco-groups was identified with Rm values of: 0.43, 0.55, 0.58, 0.82. A higher level of protein band polymorphism was proven in Bulgarian ecotypes in comparison with Swiss ecotypes. Thirty seven polymorphic bands occurred exclusively in the Bulgarian local ecotypes and had a frequency of 0.03 or higher whereas within Swiss ecotypes was detected one unique protein fragment. SDS-PAGE "fingerprinting" is suggested as a fast and easy approach to differentiate F. pratensis ecotypes by their origin as well for detection of foreign germplasm for inclusion in breeding programs. 展开更多
关键词 Festuca pratensis ELECTROPHORESIS SEED identification diversity.
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Climate Change Favors Grapevine Production in Temperate Zones
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作者 Bruno Koch Fritz Oehl 《Agricultural Sciences》 2018年第3期247-263,共17页
Wine production has a long-standing history in Palatinate (Southwestern Germany), dating back to Roman times. Especially “Riesling”, but also several “Pinot” varieties gained major significance. Red wine varieties... Wine production has a long-standing history in Palatinate (Southwestern Germany), dating back to Roman times. Especially “Riesling”, but also several “Pinot” varieties gained major significance. Red wine varieties gained prominence over the last 20 years only, which may be a consequence of climate change. Our objective was to review temperature and rainfall data over the last 40 years, measured “on-winery” in Hainfeld and correlate these data with grapevine growth parameters: the development of bud break, flowering, veraison and harvest dates, yields and grape sugar concentrations of “Pinot Gris”, “Pinot Noir”, “Riesling”, “Silvaner” and “Müller-Thurgau”. Since the 1970s, bud break, flowering and veraison are 11 - 15, 18 - 22 and 16 - 22 days earlier;harvest dates are 25 - 40 days earlier. Sugar concentrations increased significantly, but yields decreased. Annual rainfall has not significantly risen, while the mean annual minimum and maximum air-temperatures rose by ~0.9°C, and by ~3.4°C, respectively, resulting in an average increase of the mean annual temperature of ~2.1°C. Remarkably, both mean monthly minimum and maximum temperatures rose especially in springtime, which should have been the driver for earlier bud break and flowering. A change in the climatic conditions, therefore, appears to be one of the key reasons for more favorable grapevine production in Palatinate, especially for “Pinot Noir”, which showed the highest increase in sugar concentrations. The Huglin-index, a measure for the suitability of growing specific grapevine varieties in given environments, increased from 1685 to 2063. According to this index, the climate change may be favorable already for growing grape varieties so far rarely grown in temperate zones, such as “Cabernet Sauvignon”, “Syrah” and “Tempranillo” that are more suited to warmer, Mediterranean climates. 展开更多
关键词 Central EUROPE CLIMATIC Diversity VITICULTURE VITIS VINIFERA
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Effect of Equi-Strath<sup>&#174;</sup>on Leucocyte Occurrence in the Haired Skin of Horses
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作者 Danja D. Wiederkehr Elise Jeannerat +2 位作者 Paivi Nussbaumer Dominik Burger Hendrika Anette van Dorland 《Agricultural Sciences》 2018年第1期1-7,共7页
Strath?/Bio-Strath? is a plasmolyzed herbal yeast product with malt, honey and orange syrup. Its ability to support the immune system of the human being is well known and was tested in several studies. Equi-Strath?, t... Strath?/Bio-Strath? is a plasmolyzed herbal yeast product with malt, honey and orange syrup. Its ability to support the immune system of the human being is well known and was tested in several studies. Equi-Strath?, the adapted product for horses was tested in this study. The aim of the study was to analyze the effects of Equi-Strath? on skin condition in the horse. The study included twenty healthy Franches-Montagnes stallions which were divided into two groups. The study group (SG, n = 10) received 0.06 ml/kg bodyweight of Equi-Strath?, the control group (CG, n = 10) the same amount of placebo, daily. The supplement and the placebo were given from week 1 until week 10 of the trial, orally. Skin biopsies were taken three times, once at the beginning of the study (week 0), once at half time (week 5) and once at the end of the study (week 10), followed by histological analysis including leucocytes count twice in five vision fields of each slide. No alterations of hair, adnexal structures or skin thickness were found. However, the number of perivascular lymphocytes turned out to be increased at the end of the study in 9 out of 10 animals of the study group, whereas number of lymphocytes in biopsies of the control group where increased only in 4 out of 10 animals. The increase of lymphocytes in the study group suggests an activation of the immune system due to the application of Equi-Strath?. 展开更多
关键词 EQUINE Skin BIOPSIES Plasmolyzed HERBAL Yeast LYMPHOCYTES
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Vegetation Resources and Goat Foraging Behaviour in Rangeland System in Southern of Madagascar
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作者 Arsene Jules Randrianariveloseheno Jean de Neupomuscene Rakotozandriny Roger Daccord 《Journal of Life Sciences》 2014年第11期902-907,共6页
Goat satisfying energy requirements of goat are determined by anatomical body and browse leaves. In High Bassin zone of Mandrare in Southern Madagascar, sampling area of 400 m^2 has been monitored to analysis floristi... Goat satisfying energy requirements of goat are determined by anatomical body and browse leaves. In High Bassin zone of Mandrare in Southern Madagascar, sampling area of 400 m^2 has been monitored to analysis floristic diversity and Shannon-Weaver index and to establish rangeland typology. With one ram, two castrated goats and three ewes, foraging behaviour, bite rate and forage nutritive value were analyzed in native pastureland during six days at two browsing periods. As results, four pastureland groups were classified with dominant shrubs plants Acacia farnesiana, Poupartia caffra, Kigelianthe madagascariensis and Rhigozum madagascariense. Rangelands sites have presented lower heterogeneity with floristic density (236-658 plants per hectare), Shannon-Weaver index (0.28-0.95), maximum diversity (1.04 ± 0.07) with P 〈 0.05. Most of 42 identified fodder plants presented significant difference (P 〈 0.05) and higher nutritive value (35-54% Dry Matter or DM); mineral matter (70-162 g·kg DM^-1); Crude Protein (124-175 g·kg DM^-1); Crude Fibre (203-376 g·kg DM^-1); Neutral Detergent Fiber (388-548 g·kg DM^-1) and gross energy (3617-4464 kcal·kg DM^-1). Acaciafarnesiana rangeland was overgrazed with 4.00 to 9.00 bites·mn^-1. In fact, relationships between phytosociology, nutritional parameters and foraging behaviour have been analyzed to improve with autochthonous plants and to manage rangeland in semi arid environment. 展开更多
关键词 BITE goats FORAGING BEHAVIOUR Madagascar.
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Demand and Supply of Water for Agriculture: Influence of Topography and Climate in Pre-Alpine, Mesoscale Catchments
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作者 Jürg Fuhrer Karsten Jasper 《Natural Resources》 2012年第3期145-155,共11页
With climate change, water may become limited for intensive agriculture even in regions presently considered “water-rich”. Information about the potential water requirement and its temporal and spatial variability c... With climate change, water may become limited for intensive agriculture even in regions presently considered “water-rich”. Information about the potential water requirement and its temporal and spatial variability can help to develop future water management plans. A case study was carried out for Switzerland with its highly complex pre-alpine topography and steep gradients in climate. The hydrological model WaSiM-ETH was used to simulate net irrigation requirement (NIR) for cropland, grassland and orchards using criteria to define irrigation periods based either on the water stress level (expressed by the ratio of actual (aET) to potential evapotranspiration ((pET) (Method 1) or on thresholds for soil water potential (Method 2). Simulations for selected catchments were carried out with a daily time step for the period 1981-2010 using a 500 × 500 m spatial resolution. Catchment-scale NIR ranged between 0 and 4.3 million m3 and 0 and 7.3 million m3 for the two methods, respectively, with no trend over the observation period in any catchment. During the heat wave in 2003, NIR increased by a factor of 1.5 to 2.3 relative to the mean, and in catchments where discharge is directly dependent on precipitation, NIR in the summer of 2003 reached the limits of river water availability. In contrast, in a region with water supply from glacier melt water, highest NIR in 2003 still remained far below total river discharge. The results show that NIR varies strongly between years and across the landscape, and even in a presently cool-temperate climate, irrigation may put pressure on regional water resources under extreme climatic conditions that may become more frequent by the end of the 21st century. 展开更多
关键词 AGRICULTURE Irrigation CLIMATE Discharge WaSim-ETH
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