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Estimating interaction between surface water and groundwater in a permafrost region of the northern Tibetan Plateau using heat tracing method 被引量:1
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作者 TanGuang Gao Jie Liu +5 位作者 TingJun Zhang ShiChang Kang ChuanKun Liu ShuFa Wang Mika Sillanpaa YuLan Zhang 《Research in Cold and Arid Regions》 CSCD 2020年第2期71-82,共12页
Understanding the interaction between groundwater and surface water in permafrost regions is essential to study flood frequencies and river water quality, especially in the high latitude/altitude basins. The applicati... Understanding the interaction between groundwater and surface water in permafrost regions is essential to study flood frequencies and river water quality, especially in the high latitude/altitude basins. The application of heat tracing method,based on oscillating streambed temperature signals, is a promising geophysical method for identifying and quantifying the interaction between groundwater and surface water. Analytical analysis based on a one-dimensional convective-conductive heat transport equation combined with the fiber-optic distributed temperature sensing method was applied on a streambed of a mountainous permafrost region in the Yeniugou Basin, located in the upper Heihe River on the northern Tibetan Plateau. The results indicated that low connectivity existed between the stream and groundwater in permafrost regions.The interaction between surface water and groundwater increased with the thawing of the active layer. This study demonstrates that the heat tracing method can be applied to study surface water-groundwater interaction over temporal and spatial scales in permafrost regions. 展开更多
关键词 surface water GROUNDWATER PERMAFROST heat tracing method TIBETAN Plateau
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Deviation of the Lagrangian particle tracing method in the evaluation of the Southern Hemisphere annual subduction rate
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作者 Kai LIU Shan GAO Fan WANG 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2022年第3期891-906,共16页
The classical Lagrangian particle tracing method is widely used in the evaluation of the ocean annual subduction rate.However,our analysis indicates that in addition to neglecting the effect of mixing,there are two po... The classical Lagrangian particle tracing method is widely used in the evaluation of the ocean annual subduction rate.However,our analysis indicates that in addition to neglecting the effect of mixing,there are two possible deviations in the method:one is an overestimation due to not considering that the amount of subducted water at the source location may be inadequate during the late winter of the first year when the mixed layer becomes shallow;the other one is an underestimation due to the neglect of the effective subduction caused by strong vertical pumping.Quantitative analysis shows that these two deviations mainly exist in the low-latitude subduction areas of the South Pacific and South Atlantic.The two deviations have very similar distribution areas and can partially off set each other.However,the overall deviation is still large,and the maximum relative deviation ratio can reach 50%;therefore,it cannot be ignored. 展开更多
关键词 subduction rate Lagrangian particle tracing method mixed layer tropical water eastern subtropical mode water
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An intersection method for locating earthquakes in complex velocity models 被引量:1
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作者 赵爱华 丁志峰 《Applied Geophysics》 SCIE CSCD 2007年第4期294-300,共7页
The intersection method is one of the basic approaches for locating earthquakes and is not only robust but also efficient. However, its location accuracy is not high, especially for focal depth because the velocity mo... The intersection method is one of the basic approaches for locating earthquakes and is not only robust but also efficient. However, its location accuracy is not high, especially for focal depth because the velocity model used for the conventional intersection method is based on homogeneous or laterally homogeneous media, which is too simple. In order to improve the accuracy, we have modified the existing intersection method. In the modified approach, the earthquake loci are not assumed to be circular or hyperbolic and calculation accuracy is improved using a minimum traveltime tree algorithm for tracing rays. The numerical model shows that the modified method can locate earthquakes in complex velocity models. 展开更多
关键词 Earthquake location intersection method ray tracing minimum traveltime tree algorithm
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An efficient method for tracing planar implicit curves 被引量:2
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作者 YU Zheng-sheng CAI Yao-zhi +2 位作者 OH Min-jae KIM Tae-wan PENG Qun-sheng 《Journal of Zhejiang University-Science A(Applied Physics & Engineering)》 SCIE EI CAS CSCD 2006年第7期1115-1123,共9页
This paper presents a method for tracing a planar implicit curve f(x, y)=0 on a rectangular region based on continuation scheme. First, according to the starting track-point and the starting track-direction of the c... This paper presents a method for tracing a planar implicit curve f(x, y)=0 on a rectangular region based on continuation scheme. First, according to the starting track-point and the starting track-direction of the curve, make a new fimction F(x, y)=0 where the same curve withf(x, y)=0 is defined. Then we trace the curve between the two domains where F(x, y)〉0 and F(x, y)〈0 alternately, according to the two rules presented in this paper. Equal step size or adaptive step size can be used, when we trace the curve. An irregular planar implicit curve (such as the curve with large curvatures at some points on the curve), can be plotted if an adaptive step size is used. Moreover, this paper presents a scheme to search for the multiple points on the curve. Our method has the following advantages: (1) it can plot Co planar implicit curves; (2) it can plot the planar implicit curves with multiple points; (3) by the help of using the two rules, our method does not need to compute the tangent vector at the points on the curve, and directly searches for the direction of the tracing curve; (4) the tracing procedure costs only one of two evaluations of function f(x, y)=0 per moving step, while most existing similar methods cost more evaluations of the function. 展开更多
关键词 Planar implicit curve Curve tracing Continuation method Geometric modeling
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猪捷申病毒荧光RT-RAA检测方法的建立及应用 被引量:1
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作者 孙志华 林青 +4 位作者 康龙滨 王隆柏 周伦江 俞道进 陈秋勇 《动物医学进展》 北大核心 2025年第3期130-133,共4页
为快速检测猪捷申病毒(PTV),根据PTV 5′UTR基因保守序列设计特异性引物和探针,优化荧光逆转录重组酶介导等温扩增(RT-RAA)反应条件和体系,并通过特异性、敏感性、重复性试验和临床应用对RT-RAA进行评价。结果表明,在37℃恒温反应22 mi... 为快速检测猪捷申病毒(PTV),根据PTV 5′UTR基因保守序列设计特异性引物和探针,优化荧光逆转录重组酶介导等温扩增(RT-RAA)反应条件和体系,并通过特异性、敏感性、重复性试验和临床应用对RT-RAA进行评价。结果表明,在37℃恒温反应22 min即可完成对PTV核酸扩增,最低检出限度为30.1 copies/μL;与猪流行性腹泻病毒(PEDV)、猪传染性胃肠炎病毒(TGEV)、猪轮状病毒(PoRV)、猪德尔塔冠状病毒(PDCoV)均无交叉反应;重复性试验显示,组内和组间变异系数均小于5%;23份临床样品检测显示PTV阳性率为21.74%(5/23),检测结果与RT-qPCR一致。说明建立的PTV荧光RT-RAA检测方法具有简便、高效、稳定等优点,为PTV的快速检测和流行病学调查提供了技术手段。 展开更多
关键词 猪捷申病毒 荧光逆转录重组酶介导等温扩增 检测方法
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猪流行性腹泻病毒、猪传染性胃肠炎病毒和猪δ冠状病毒三重RT-qPCR检测方法的建立 被引量:3
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作者 陈千林 李绍梅 +5 位作者 张邑帆 牟豪 刘明妮 杨柳 郭庆勇 付利芝 《中国兽医学报》 北大核心 2025年第5期905-912,共8页
猪肠道冠状病毒(SeCoV)包括猪流行性腹泻病毒(PEDV)、传染性胃肠炎病毒(TGEV)和猪德尔塔冠状病毒(PDCoV),是引起仔猪严重腹泻的主要病原体,给养猪业造成了巨大的损失。为快速、准确地检测和鉴别这3种病毒,本研究建立了一种三重实时荧光... 猪肠道冠状病毒(SeCoV)包括猪流行性腹泻病毒(PEDV)、传染性胃肠炎病毒(TGEV)和猪德尔塔冠状病毒(PDCoV),是引起仔猪严重腹泻的主要病原体,给养猪业造成了巨大的损失。为快速、准确地检测和鉴别这3种病毒,本研究建立了一种三重实时荧光定量反转录PCR(RT-qPCR)方法,用于同时检测PEDV、TGEV和PDCoV。根据PEDV M基因、TGEV ORF 1b基因和PDCoV ORF 1b基因的保守序列分别设计了特异性引物和探针。优化反应条件后,成功建立了一种能同时检测PEDV、TGEV和PDCoV的三重RT-qPCR方法。该方法对这3种病毒具有良好的特异性,与猪场常见的猪瘟病毒(CSFV)、猪圆环病毒2型(PCV2)、猪A群轮状病毒(PoRVA)、猪伪狂犬病毒(PRV)和猪繁殖与呼吸综合征病毒(PRRSV)等均无交叉反应。对重组质粒pTOPO-PEDV 128、pTOPO-TGEV 116和pTOPO-PDCoV 125线性模板的检测极限分别为16.835、17.610、17.020拷贝/μL。组内、组间变异系数均小于5%,且组间差异不显著(P>0.05)。与标准方法的符合性比较结果显示,三重RT-qPCR的检测符合率为100%,在35份组织样本的检测中,17份呈PEDV阳性,阳性率为48.57%(17/35),TGEV和PDCoV的检测结果均为阴性,未检测到混合感染。结果表明,建立的三重RT-qPCR方法特异、灵敏、稳定、快捷,可同时用于PEDV、TGEV和PDCoV的临床检测和鉴别诊断,为猪腹泻冠状病毒的检测和流行病学调查提供了一种高效、可靠的技术手段。 展开更多
关键词 猪流行性腹泻病毒 传染性胃肠炎病毒 猪德尔塔冠状病毒 三重rt-qPCR 检测方法
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Mass scale screening of common arboviral infections by an affordable,cost effective RT-PCR method 被引量:1
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作者 Debjani Taraphdar Arindam Sarkar Shyamalendu Chatterjee 《Asian Pacific Journal of Tropical Biomedicine》 SCIE CAS 2012年第2期97-101,共5页
Objective:To develop a rapid,cost effective RT-PCR method for the mass scale diagnosis of such diseases at the vireraia stage to find out the actual disease burden in that area.Methods:For this purpose,cases with the ... Objective:To develop a rapid,cost effective RT-PCR method for the mass scale diagnosis of such diseases at the vireraia stage to find out the actual disease burden in that area.Methods:For this purpose,cases with the history of only short febrile illness were considered.Thus 157 samples with the history of dengue/chikungunya like illness and only 58 samples with a history of acute encephalitis syndrome(AES)were selected.Results:Out of 157 samples,42 and 74 were detected as dengue and chikungunya,respectively and out of 58 AES cases only 23 could be detected as Japanese encephalitis by this RT-PCR method.Conclusions:This cost effective RT-PCR method can detect the total positive cases that remain undetected by EL1SA method.Moreover,this method is capable to detect the viral RNA from patients'sera even after the appearance of IgM antibody at one fifth costs as compared with the other commercially available kits. 展开更多
关键词 COST effective rt-PCR method MASS SCREENING ARBOVIRUS
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TRACING METHOD OF NATURAL SEDIMENTS BY NEUTRON ACTIVATION
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作者 茅志祥 严佩岚 +6 位作者 黄建维 戴贤凯 韩乃斌 柴之芳 钱琴芳 马淑兰 马建国 《Nuclear Science and Techniques》 SCIE CAS CSCD 1991年第2期121-128,共8页
A new method of NAA for sediment movement study is presented in this paper. Through analyzing the natural sediment, the information about natural tracing agents has been obtained, which can show the direction of sedim... A new method of NAA for sediment movement study is presented in this paper. Through analyzing the natural sediment, the information about natural tracing agents has been obtained, which can show the direction of sediment movement and relative discharge of sediment transportation. Test results in some areas, such as Shantou Harbour and Hangzhou Bay, are in good agreement with those from normal hydrologic measurements and some results are not obtainable with the latter. The NAA is economical, practical and reliable, and should be widely used in engineering practice. 展开更多
关键词 tracing method NATURAL SEDIMENT NEUTRON activation NAA
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Indirect-approach method for specified-end points seismic ray tracing in three dimen-sional inhomogeneous media
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作者 徐朝繁 张先康 +3 位作者 杨健 杨卓欣 邓宏钊 宋松岩 《Acta Seismologica Sinica(English Edition)》 EI CSCD 1998年第3期56-63,共8页
Generally speaking, the factors of both medium and tectonic that give rise to heterogeneity of the earth crust and mantle structures should be taken into account simultaneously in three dimensional seismic ray tracin... Generally speaking, the factors of both medium and tectonic that give rise to heterogeneity of the earth crust and mantle structures should be taken into account simultaneously in three dimensional seismic ray tracing. In this paper, the three dimensional structure models are constructed with the model similar to generation system in computer aid design and manufacturing (CAD/CAM). Based on the algorithm proposed by Cerveny et al . for complete seismic ray tracing in complex three dimensional structures, a new technique called the indirect approach method for two point seismic ray tracing in three dimensional laterally heterogeneous media has been put forward, and its numerical computing examples were given. 展开更多
关键词 3 D ray tracing CRUST mantle structure indirect approach method
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Variations of trace elements and rare earth elements(REEs)treated by two different methods for snow-pit samples on the Qinghai-Tibetan Plateau and their implications
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作者 YueFang Li Zhen Li +4 位作者 Ju Huang Giulio Cozzi Clara Turetta Carlo Barbante LongFei Xiong 《Research in Cold and Arid Regions》 CSCD 2017年第6期656-667,共12页
Although previous investigations of the trace elements in snow and ice from the Qinghai-Tibetan Plateau obtained interesting information about pollution from human activities on the plateau, most were based on traditi... Although previous investigations of the trace elements in snow and ice from the Qinghai-Tibetan Plateau obtained interesting information about pollution from human activities on the plateau, most were based on traditional acidification methods.To emphasize the influence of the different sample-preparation methods on the records of trace elements and rare earth elements, snow samples were collected from glaciers on the Qinghai-Tibetan Plateau in China and prepared using two methods: traditional acidification and total digestion. Concentrations of 18 trace elements(Al, Ti, Fe, Rb, Sr, Ba, V, Cr, Mn, Li,Cu, Co, Mo, Cs, Sb, Pb, Tl, and U), along with 14 rare earth elements(REEs: La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er,Tm, Yb, and Lu), Y, and Th in the snow samples, were measured using inductively coupled plasma-sector field mass spectrometry(ICP-SFMS). The results showed that the mass fraction of the trace elements(defined as ratio of concentration in the acid-leachable fraction to that in the digested sample) such as Mo, Ti, Al, Rb, and V, varied from 0.06 to 0.5. The mass fraction of other trace elements varied from about 0.6 to more than 0.9; those of the REEs, Y, and Th varied from 0.34 to0.75. Lower mass fractions will lead to an overestimated contribution of other sources, especially human activities, and the underestimated fluxes of these trace elements(especially REEs, Y, and Th, as well as dust) if the REEs are used as the proxy for the crust dust. The two sample-preparation methods exhibited different REE normalized distribution patterns,REE ratios, and provenance-tracing results. The REE normalized distribution patterns and proxies in the digested samples are more reliable and integrated than those found in traditional acidification method for dust-provenance tracing. 展开更多
关键词 sample-preparation methodS trace elements REES mass fraction SNOW SAMPLES Qinghai-Tibetan Plateau
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Study of a 105 GHz short-pulse dummy load for the electron cyclotron resonance heating system with the quasi-optical method
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作者 Shouqi XIONG Donghui XIA +4 位作者 Mei HUANG Gangyu CHEN Wenting WENG Guoyao FAN Yuan PAN 《Plasma Science and Technology》 SCIE EI CAS CSCD 2022年第10期139-146,共8页
The accurate power measurement is important for an ECRH system in tokamak.The dummy load is designed and developed for the measurement of the millimeter wave power.This work analyzes the dummy load based on the quasi-... The accurate power measurement is important for an ECRH system in tokamak.The dummy load is designed and developed for the measurement of the millimeter wave power.This work analyzes the dummy load based on the quasi-optical method and the ray tracing method.The reflectivity and thermal deposition of the dummy load have been considered to ensure the safety of the entire system.High-power tests have been carried out at a 105 GHz/500 kW ECRH system.The results of the tests indicate that the designed dummy load is stable and valid. 展开更多
关键词 dummy load power measurement quasi-optical method ray tracing ECRH
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Travel time tomography by ray tracing using the fast sweeping method
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作者 Huai-gu Tang Ren-jun Xie +3 位作者 Yi Wu Chang-suo Zhou Jun-liang Yuan Wei Qin 《Applied Geophysics》 SCIE CSCD 2024年第4期697-714,879,共19页
This paper presents a gradient-descent travel time tomography method for solving the acoustictype velocity model inversion problem.Similarly to the adjoint-state method,the proposed method is based on the Eikonal equa... This paper presents a gradient-descent travel time tomography method for solving the acoustictype velocity model inversion problem.Similarly to the adjoint-state method,the proposed method is based on the Eikonal equation,enabling simultaneous calculation of contributions from all common-source receivers to the gradient.This overcomes the inefficiency inherent in conventional travel time tomography methods,which rely on a two-point ray tracing process.By directly calculating Fréchet derivatives,our method avoids the complex derivation processes associated with the adjoint-state method.The key to calculating the Fréchet derivatives is to calculate a so-called ray-path term.Consequently,compared to the adjoint-state method,the proposed method can explicitly obtain the ray paths,resulting in a more concise and intuitive derivation process.Furthermore,our method retains the benefits of the adjoint-state method,such as speed,low memory usage,and robustness.This paper focuses on elucidating the principles and algorithms for calculating the raypath term based on the fast sweeping method.The algorithms could be further speeded up by using parallel computational techniques.Synthetic tests demonstrate that our proposed travel time tomographic method accurately calculates ray paths,regardless of the complexity of the model and recording geometry. 展开更多
关键词 TOMOGRAPHY velocity model building ray tracing fast-sweeping method
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Distinguishing the main components of submarine groundwater and estimating the corresponding fluxes based on radium tracing method—taking the Maowei Sea for example
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作者 Linwei Li Jinzhou Du +1 位作者 Xilong Wang Yanling Lao 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2023年第8期1-23,共23页
Submarine groundwater discharge(SGD)is an important part in the land-sea interactions,which mainly contains three components:submarine fresh groundwater discharge(SFGD),tidal flat recirculated saline groundwater disch... Submarine groundwater discharge(SGD)is an important part in the land-sea interactions,which mainly contains three components:submarine fresh groundwater discharge(SFGD),tidal flat recirculated saline groundwater discharge(tidal flat RSGD)and subtidal recirculated saline groundwater discharge(subtidal RSGD).In order to make a more accurate assessment of the impact of SGD on coastal ecological environment,it is necessary to distinguish the main components of SGD.In this study,the Maowei Sea,located in the northern part of the Beibu Gulf,was selected as the study area.Based on the radium(Ra)tracing method,we present a new analytical method for distinguishing the three main components of SGD in this area combined with field data.The average daily flow along the coastline of the Maowei Sea of tidal flat RSGD was slightly higher than that of SFGD,and both two were on the magnitude of 1×10^(5)m^(3)/d.The average daily flow for the subtidal RSGD of the entire subtidal zone of the Maowei Sea reached to the magnitude of 1×10^(6)-1×10^(7)m^(3)/d.The long-term variation trend of terrestrial SGD is a valuable information for the study of the influence of terrigenous material on the coastal ecological environment.Based on the results of four sampling periods,it is found that the fluxes of SFGD and tidal flat RSGD in the Maowei Sea had good linear correlation with the net precipitation.As an example,January 2015 to August 2022 were selected as the study periods,and the variation trends of SFGD and tidal flat RSGD were calculated by linear function with net precipitation as the independent variable.The results showed that the flux of tidal flat RSGD was slightly higher than that of SFGD,and the difference between the two is larger in flood season while smaller in dry season.In general,in the coastal range of China,the total SGD flux in the Maowei Sea area is at a high level,and the SFGD flux is at a medium level. 展开更多
关键词 submarine groundwater discharge bottom sediment radium tracing method offshore transport long-term monitoring
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Partial Trace Method for Deriving Density Operators of Light Field
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作者 范洪义 唐绪兵 胡利云 《Communications in Theoretical Physics》 SCIE CAS CSCD 2010年第1期45-48,共4页
With the help of technique of integration within an ordered product of operators we can fully display the partial trace method to deduce some new density operators of light field. The general form of single-mode densi... With the help of technique of integration within an ordered product of operators we can fully display the partial trace method to deduce some new density operators of light field. The general form of single-mode density operator is derived in this way from a normalized two-mode generalized squeezed pure state density operator. 展开更多
关键词 IWOP technique partial trace method two-mode generalized squeezed pure state
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基于N基因的RT-LAMP技术检测PEDV、TGEV、PDCoV三种猪腹泻冠状病毒的研究 被引量:1
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作者 邓可辉 陈志飞 +6 位作者 俞婷 王志林 王修武 郭智轩 李松倍 魏文康 贺东生 《中国动物传染病学报》 北大核心 2025年第2期70-79,共10页
本研究成功建立了检测猪流行性腹泻病毒(PEDV)、猪传染性胃肠炎病毒(TGEV)、猪丁型冠状病毒(PDCoV)3种猪冠状病毒的反转录环介导等温扩增技术(RT-LAMP),为现场快速诊断提供技术支持。根据GenBank公布的PEDV、TGEV、PDCoV的N基因保守序... 本研究成功建立了检测猪流行性腹泻病毒(PEDV)、猪传染性胃肠炎病毒(TGEV)、猪丁型冠状病毒(PDCoV)3种猪冠状病毒的反转录环介导等温扩增技术(RT-LAMP),为现场快速诊断提供技术支持。根据GenBank公布的PEDV、TGEV、PDCoV的N基因保守序列作为靶序列设计了3套LAMP检测引物,并通过反应条件优化、敏感性试验、特异性试验以及临床样品检测,分别建立了3种快捷、敏感的猪冠状病毒RT-LAMP检测方法。结果显示:所建立的PEDV、TGEV、PDCoV 3种冠状病毒RT-LAMP检测方法的最佳反应温度分别为65℃、63℃、63℃,3种检测方法均可在45 min左右完成恒温扩增,扩增出特异性阶梯状条带,且不依赖于PCR仪等昂贵设备,仅需普通恒温装置即可反应。所建立的检测方法对PEDV、TGEV、PDCoV分别可以达到的检测下限为20、23、10拷贝/μL,敏感性较好;所建立的3种检测方法分别只检测出PEDV、TGEV、PDCoV,且与常见的猪源性病毒均无交叉反应,特异性好。用所建立的3种RT-LAMP检测方法对45份猪腹泻病料进行检测,PEDV、TGEV、PDCoV阳性率分别为33.33%(15/45)、22.22%(10/45)、13.33%(6/45),均比常规RT-PCR检测阳性率高。与常规RT-PCR相比较,本研究建立的方法操作简便快速、经济,且检测设备门槛低,更适用于基层临床检测。 展开更多
关键词 冠状病毒 反转录环介导等温扩增 检测方法
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月季3种病毒RT-LAMP检测方法的建立及应用
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作者 李振锋 袁志豪 +4 位作者 陆月霞 罗云 黄冬华 王国平 蔡丽 《山西农业大学学报(自然科学版)》 北大核心 2025年第1期1-9,共9页
[目的]月季是我国重要的观赏花卉,李属坏死环斑病毒(prunus necrotic ringspot virus,PNRSV)、苹果茎沟病毒(apple stem grooving virus,ASGV)、月季潜隐病毒1(rose cryptic virus 1,RCV1)是侵染月季的主要病毒,与其它病毒复合侵染月季... [目的]月季是我国重要的观赏花卉,李属坏死环斑病毒(prunus necrotic ringspot virus,PNRSV)、苹果茎沟病毒(apple stem grooving virus,ASGV)、月季潜隐病毒1(rose cryptic virus 1,RCV1)是侵染月季的主要病毒,与其它病毒复合侵染月季时,对其生长和发育可造成严重影响。本文旨在建立灵敏、便捷地检测月季中这3种病毒的RT-LAMP检测方法。[方法]本研究以病毒CP基因为靶序列设计特异性引物,建立侵染月季的PNRSV、ASGV和RCV1的RT-LAMP检测方法,并对反应体系中Mg^(2+)浓度和dNTP使用浓度、反应温度和反应时间进行了优化,并对反应灵敏度和特异性进行了检测。[结果]该方法在恒温条件(61℃)下即可对目标病毒实现可视化特异性检测,检测体系中Mg^(2+)和dNTP最佳使用浓度分别为5.0 mmol/L和1.2 mmol/L;本研究所建立的RT-LAMP检测方法,RCV1、PNRSV和ASGV可以检测到病毒的最低浓度分别为3.19×10^(5)、6.44×10^(4)和4.04×10^(4)拷贝/μL,灵敏度是RT-PCR的100~1000倍,而且检测体系具有很好的反应特异性,与侵染月季的其它病毒之间不存在交叉反应;使用该RT-LAMP检测方法随机对田间19个样品进行检测,可通过颜色变化,能准确检测出样品中的目标病毒,而无需借助琼脂糖凝胶电泳或其它专门仪器。[结论]该方法可通过直接添加染料实现可视化,具有快速、便捷、特异性好特点,适用于侵染月季的PNRSV、ASGV和RCV1的快速诊断及田间监测。 展开更多
关键词 月季 病毒 rt-LAMP 检测方法
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人星状病毒和人札幌病毒双重荧光定量RT-PCR检测方法的建立与应用
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作者 林鹏 吴毓薇 +6 位作者 赵昕宇 蒋富凤 万强 薛亮 徐环 蔡芷荷 吴清平 《微生物学通报》 北大核心 2025年第4期1810-1829,共20页
【背景】人星状病毒(human Astrovirus,HAstV)和人札幌病毒(human Sapovirus,HuSaV)是引起人类急性胃肠炎的重要病原体,尤其对婴幼儿、老年人和免疫力低下等人群造成严重的威胁。目前尚无疫苗和特异性手段防控病毒的感染与传播,因此加... 【背景】人星状病毒(human Astrovirus,HAstV)和人札幌病毒(human Sapovirus,HuSaV)是引起人类急性胃肠炎的重要病原体,尤其对婴幼儿、老年人和免疫力低下等人群造成严重的威胁。目前尚无疫苗和特异性手段防控病毒的感染与传播,因此加强检测对防控病毒的传播具有重要的意义。【目的】建立能同时检测HAstV和HuSaV的双重荧光定量RT-PCR方法,为HAstV和HuSaV的快速检测和流行病学调查提供技术支持。【方法】针对HAstV和HuSaV保守区域基因序列,设计特异性检测引物和探针并优化反应体系,建立HAstV和HuSaV双重荧光定量RT-PCR检测方法,并分析其特异性、敏感性和重复性。【结果】HAstV和HuSaV双重荧光定量RT-PCR检测方法针对HAstV和HuSaV最低检测线分别为15 copies/μL和2.1 copies/μL;与其他常见的食源性病毒、致病菌和乳酸菌无交叉反应;批内和批间重复性试验变异系数均小于3.5%。采用人工模拟不同浓度的病毒污染牡蛎样品,结果显示HAstV和HuSaV双重荧光定量RT-PCR检测方法能检测出所有受污染的牡蛎样品,与阳性对照组检测结果差异不显著(P>0.05);利用所建立的HAstV和HuSaV双重荧光定量RT-PCR检测方法检测不同食品样品的HAstV和HuSaV,其阳性率分别为10.83%和0%。【结论】本研究建立的HAstV和HuSaV双重荧光定量RT-PCR检测方法具有较好的敏感性、特异性和重复性,适用于食品样品中HAstV和HuSaV的快速检测及大规模流行病学调查。 展开更多
关键词 人星状病毒 人札幌病毒 双重荧光定量rt-PCR检测方法
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B亚型禽偏肺病毒可视化荧光RT-LAMP方法的建立 被引量:1
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作者 赵俊柯 谢芝勋 +7 位作者 余丹 张艳芳 谢志勤 范晴 尹文巧 杨冰怡 黄青红 喻华英 《黑龙江畜牧兽医》 北大核心 2025年第8期92-98,共7页
为了能快速鉴别B亚型禽偏肺病毒(Avian metapneumovirus B,aMPVB)与其他禽类常见病毒,试验基于aMPVB F基因的保守区域设计一套特异性环介导等温扩增(loop-mediated isothermal amplilication,LAMP)引物,包括外引物F3和B3,内引物FIP(F1c+... 为了能快速鉴别B亚型禽偏肺病毒(Avian metapneumovirus B,aMPVB)与其他禽类常见病毒,试验基于aMPVB F基因的保守区域设计一套特异性环介导等温扩增(loop-mediated isothermal amplilication,LAMP)引物,包括外引物F3和B3,内引物FIP(F1c+F2)和BIP(B1c+B2),环引物Floop和Bloop,其中FIP的5′端用淬灭基团BHQ2标记,同时在F3、B3之间引入1条探针FD,其3′端用CY5荧光基团标记,建立可视化荧光RT-LAMP方法,对该方法进行反应条件优化及特异性、敏感性检测,并利用该方法对临床样品进行检测。结果表明:建立的可视化荧光RTLAMP方法的最佳探针复合物浓度为0.32μmol/L,最佳反应温度为63℃;该方法仅能检测到aMPVB,其他17种禽类常见病毒均呈阴性;对aMPVB的最低检出限为1.2×10^(2)copies/μL,敏感性是普通PCR方法(1.2×10^(3)copies/μL)的10倍。该方法的反应时间为60 min,约为普通PCR方法的一半,大大提高了检测效率。利用该方法对采自广西地区的23份临床样本进行检测,结果与普通PCR方法完全一致。说明该方法能够快速、准确地检测aMPVB,特异性好,敏感性高,具有良好的实际应用价值。 展开更多
关键词 禽偏肺病毒 荧光rt-LAMP 可视化 FD探针 检测方法
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A型牛轮状病毒SYBR Green I RT-qPCR检测方法的建立
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作者 焦迪 王瑞 +8 位作者 郝艳霞 张晓倩 崔强 王海艳 陈林军 延涵 罗晓平 李军燕 赵治国 《中国动物检疫》 2025年第9期69-76,共8页
A型牛轮状病毒(BRV-A)是引起牛腹泻的重要病原之一,对养牛业危害最大。为建立一种针对BRV-A的快速、高通量、低成本检测方法,根据BRV-A的VP6基因保守区设计特异性引物,建立了检测BRV-A的SYBR Green I RT-qPCR方法。该方法对浓度梯度为4.... A型牛轮状病毒(BRV-A)是引起牛腹泻的重要病原之一,对养牛业危害最大。为建立一种针对BRV-A的快速、高通量、低成本检测方法,根据BRV-A的VP6基因保守区设计特异性引物,建立了检测BRV-A的SYBR Green I RT-qPCR方法。该方法对浓度梯度为4.41×10^(8)~4.41×10^(2) copies/μL质粒标准品的扩增Ct值与拷贝数浓度呈良好的线性关系,熔解曲线为单峰;与其他引起牛腹泻的常见病原无交叉反应,最低检测限为4.41×10^(1) copies/μL,批内、批间重复性试验Ct值变异系数均低于1%;对临床粪便样品的阳性检出率高于地方标准中的PCR方法,且检测结果符合性较好。综上,本研究建立的BRV-A SYBR Green I RT-qPCR检测方法灵敏、特异、稳定,且操作简单、成本低,为临床样品的大规模BRV-A检测及其感染的早期诊断提供了技术支撑。 展开更多
关键词 牛轮状病毒 SYBR Green I荧光rt-PCR 检测方法
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A群轮状病毒和塞内卡病毒双重RT-qPCR检测方法的建立及应用
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作者 刘星 罗霆宇 +5 位作者 张玉 李凯丽 尹博曌 李昌文 夏长友 高彩霞 《实验动物科学》 2025年第3期30-37,共8页
目的 建立A群轮状病毒(PoRVA)和塞内卡病毒(SVA)双重RT-qPCR检测方法,并对其进行初步应用。方法 通过比对A群轮状病毒和塞内卡病毒毒株序列,选取PoRVA NSP3基因、SVA VP1基因保守区域分别设计引物和探针,建立PoRVA和SVA双重RT-qPCR检测... 目的 建立A群轮状病毒(PoRVA)和塞内卡病毒(SVA)双重RT-qPCR检测方法,并对其进行初步应用。方法 通过比对A群轮状病毒和塞内卡病毒毒株序列,选取PoRVA NSP3基因、SVA VP1基因保守区域分别设计引物和探针,建立PoRVA和SVA双重RT-qPCR检测方法。随后对方法的特异性和敏感性进行检测;取浓度为10~6~10^(3)copies/μL 10倍系列稀释的重组质粒标准品,每个浓度做3个平行,重复检测3次,计算组内和组间变异系数,评估方法的重复性和稳定性;用建立的双重RT-qPCR检测方法与《GB/T34756—2017猪轮状病毒病病毒RT-PCR检测方法》和《SN/T 5486—2022塞内卡病毒病检疫技术规范》的检测方法进行比对,并检测15份猪粪便样品和35份猪肛拭子样品,评估该方法的实际应用性。结果 建立的双重RT-qPCR方法在10~9~10~1 copies/μL范围Ct值与质粒浓度呈线性关系,PoRVA标准曲线Slope为-3.085,r^(2)值为0.993,扩增效率为110.956%,SVA标准曲线Slope为-3.085,r^(2)值为0.993,扩增效率为110.935%,可检测到的PoRVA和SVA最低限均为10~1 copies/μL;且与其他7种实验猪常见病原不发生交叉反应;重复检测10~6~10^(3 )copies/μL质粒标准品,组内变异系数小于0.15%,组间变异系数小于1.50%。用建立的双重RT-qPCR方法与《GB/T34756—2017猪轮状病毒病病毒RT-PCR检测方法》和《SN/T 5486—2022塞内卡病毒病检疫技术规范》方法检测15份猪粪便样品和35份猪肛拭子样品,结果显示,RT-qPCR检测出PoRVA阳性100%(50/50),SVA阳性66%(33/50),《GB/T34756—2017猪轮状病毒病病毒RT-PCR检测方法》检测阳性率100%(50/50),《SN/T 5486—2022塞内卡病毒病检疫技术规范》检测阳性率24%(12/50),阳性符合率达到100%。结论 本研究建立的双重RT-qPCR检测方法可以有效地检测PoRVA和SVA,可为猪群的疫病检测和日常监测提供技术支撑。 展开更多
关键词 A群轮状病毒 塞内卡病毒 双重rt-qPCR检测方法建立及应用
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