Self-occlusions are common in rice canopy images and strongly influence the calculation accuracies of panicle traits. Such interference can be largely eliminated if panicles are phenotyped at the 3 D level.Research on...Self-occlusions are common in rice canopy images and strongly influence the calculation accuracies of panicle traits. Such interference can be largely eliminated if panicles are phenotyped at the 3 D level.Research on 3 D panicle phenotyping has been limited. Given that existing 3 D modeling techniques do not focus on specified parts of a target object, an efficient method for panicle modeling of large numbers of rice plants is lacking. This paper presents an automatic and nondestructive method for 3 D panicle modeling. The proposed method integrates shoot rice reconstruction with shape from silhouette, 2 D panicle segmentation with a deep convolutional neural network, and 3 D panicle segmentation with ray tracing and supervoxel clustering. A multiview imaging system was built to acquire image sequences of rice canopies with an efficiency of approximately 4 min per rice plant. The execution time of panicle modeling per rice plant using 90 images was approximately 26 min. The outputs of the algorithm for a single rice plant are a shoot rice model, surface shoot rice model, panicle model, and surface panicle model, all represented by a list of spatial coordinates. The efficiency and performance were evaluated and compared with the classical structure-from-motion algorithm. The results demonstrated that the proposed method is well qualified to recover the 3 D shapes of rice panicles from multiview images and is readily adaptable to rice plants of diverse accessions and growth stages. The proposed algorithm is superior to the structure-from-motion method in terms of texture preservation and computational efficiency. The sample images and implementation of the algorithm are available online. This automatic, cost-efficient, and nondestructive method of 3 D panicle modeling may be applied to high-throughput 3 D phenotyping of large rice populations.展开更多
可靠、准确的点云聚类是后续高精度场景目标分析与解译的基础.该文提出了一种基于上下文特征和图割算法的车载点云聚类方法.首先用DBSCAN(density-based spatial clustering of applications with noise)对点云数据进行过分割,得到密度...可靠、准确的点云聚类是后续高精度场景目标分析与解译的基础.该文提出了一种基于上下文特征和图割算法的车载点云聚类方法.首先用DBSCAN(density-based spatial clustering of applications with noise)对点云数据进行过分割,得到密度可达的超体素;然后引入空间和属性上下文特征来描述超体素间的关联,并用于定义超体素构建的图模型边的权值;最后基于多标记的图割优化算法得到最佳超体素聚簇.实验结果表明,该方法能够有效改善点云聚类过分割,从而提高聚类的精度.展开更多
基金supported by the National Natural Science Foundation of China (U21A20205)Key Projects of Natural Science Foundation of Hubei Province (2021CFA059)+1 种基金Fundamental Research Funds for the Central Universities (2021ZKPY006)cooperative funding between Huazhong Agricultural University and Shenzhen Institute of Agricultural Genomics (SZYJY2021005,SZYJY2021007)。
文摘Self-occlusions are common in rice canopy images and strongly influence the calculation accuracies of panicle traits. Such interference can be largely eliminated if panicles are phenotyped at the 3 D level.Research on 3 D panicle phenotyping has been limited. Given that existing 3 D modeling techniques do not focus on specified parts of a target object, an efficient method for panicle modeling of large numbers of rice plants is lacking. This paper presents an automatic and nondestructive method for 3 D panicle modeling. The proposed method integrates shoot rice reconstruction with shape from silhouette, 2 D panicle segmentation with a deep convolutional neural network, and 3 D panicle segmentation with ray tracing and supervoxel clustering. A multiview imaging system was built to acquire image sequences of rice canopies with an efficiency of approximately 4 min per rice plant. The execution time of panicle modeling per rice plant using 90 images was approximately 26 min. The outputs of the algorithm for a single rice plant are a shoot rice model, surface shoot rice model, panicle model, and surface panicle model, all represented by a list of spatial coordinates. The efficiency and performance were evaluated and compared with the classical structure-from-motion algorithm. The results demonstrated that the proposed method is well qualified to recover the 3 D shapes of rice panicles from multiview images and is readily adaptable to rice plants of diverse accessions and growth stages. The proposed algorithm is superior to the structure-from-motion method in terms of texture preservation and computational efficiency. The sample images and implementation of the algorithm are available online. This automatic, cost-efficient, and nondestructive method of 3 D panicle modeling may be applied to high-throughput 3 D phenotyping of large rice populations.
文摘可靠、准确的点云聚类是后续高精度场景目标分析与解译的基础.该文提出了一种基于上下文特征和图割算法的车载点云聚类方法.首先用DBSCAN(density-based spatial clustering of applications with noise)对点云数据进行过分割,得到密度可达的超体素;然后引入空间和属性上下文特征来描述超体素间的关联,并用于定义超体素构建的图模型边的权值;最后基于多标记的图割优化算法得到最佳超体素聚簇.实验结果表明,该方法能够有效改善点云聚类过分割,从而提高聚类的精度.
