Gene innovation plays an essential role in trait evolution.Rhizobial symbioses,the most important N2-fixing agent in agricultural systems that exists mainly in Leguminosae,is one of the most attractive evolution event...Gene innovation plays an essential role in trait evolution.Rhizobial symbioses,the most important N2-fixing agent in agricultural systems that exists mainly in Leguminosae,is one of the most attractive evolution events.However,the gene innovations underlying Leguminosae root nodule symbiosis(RNS)remain largely unknown.Here,we investigated the gene gain event in Leguminosae RNS evolution through comprehensive phylogenomic analyses.We revealed that Leguminosae-gain genes were acquired by gene duplication and underwent a strong purifying selection.Kyoto Encyclopedia of Genes and Genomes analyses showed that the innovated genes were enriched in flavonoid biosynthesis pathways,particular downstream of chalcone synthase(CHS).Among them,Leguminosae-gain typeⅡchalcone isomerase(CHI)could be further divided into CHI1A and CHI1B clades,which resulted from the products of tandem duplication.Furthermore,the duplicated CHI genes exhibited exon–intron structural divergences evolved through exon/intron gain/loss and insertion/deletion.Knocking down CHI1B significantly reduced nodulation in Glycine max(soybean)and Medicago truncatula;whereas,knocking down its duplication gene CHI1A had no effect on nodulation.Therefore,Leguminosae-gain typeⅡCHI participated in RNS and the duplicated CHI1A and CHI1B genes exhibited RNS functional divergence.This study provides functional insights into Leguminosae-gain genetic innovation and sub-functionalization after gene duplication that contribute to the evolution and adaptation of RNS in Leguminosae.展开更多
目的初步探究肾虚证亚健康人群认知功能改变的神经影像学机制。方法对35例肾虚型亚健康受试者和35例健康对照进行重复性成套神经心理状态测验(Repeatable Battery for the Assessment of Neuropsychological Status,RBANS)及评估,并进...目的初步探究肾虚证亚健康人群认知功能改变的神经影像学机制。方法对35例肾虚型亚健康受试者和35例健康对照进行重复性成套神经心理状态测验(Repeatable Battery for the Assessment of Neuropsychological Status,RBANS)及评估,并进行静息态功能磁共振扫描。应用皮质分析方法计算两组被试脑区的低频震荡振幅(amplitude of low frequency fluctuations,ALFF)值和分数低频振幅(fractional ALFF,fALFF)值,并分析异常功能活动脑区与认知功能及临床症状之间的相关性。结果与健康受试者相比,肾虚型亚健康受试者的即刻记忆、注意编码及RBANS测验总分显著降低;并发现其左侧初级视觉皮质、左侧背侧枕叶皮质及右侧辅助运动皮质等脑区的ALFF/fALFF值异常改变。此外,左侧背侧枕叶皮质、右侧额叶眼动区ALFF值,左侧初级视觉皮质fALFF值与肾虚证积分均成正比。右侧额叶眼动区ALFF值,右侧辅助运动皮质fALFF值与测验总分成反比。结论肾虚型亚健康受试者的记忆与注意功能受损,左侧枕叶和右侧额叶等多个脑区神经活动的改变可能是肾虚证亚健康人群认知功能改变的潜在神经机制。展开更多
基金The National Natural Science Foundation of China(grant nos.32388201,32300512 and U22A20467)“Strategic Priority Research Program”of the Chinese Academy of Sciences(grant no.XDA24030501)+1 种基金CAS Project for Young Scientists in Basic Research(YSBR-078)the Xplorer Prize。
文摘Gene innovation plays an essential role in trait evolution.Rhizobial symbioses,the most important N2-fixing agent in agricultural systems that exists mainly in Leguminosae,is one of the most attractive evolution events.However,the gene innovations underlying Leguminosae root nodule symbiosis(RNS)remain largely unknown.Here,we investigated the gene gain event in Leguminosae RNS evolution through comprehensive phylogenomic analyses.We revealed that Leguminosae-gain genes were acquired by gene duplication and underwent a strong purifying selection.Kyoto Encyclopedia of Genes and Genomes analyses showed that the innovated genes were enriched in flavonoid biosynthesis pathways,particular downstream of chalcone synthase(CHS).Among them,Leguminosae-gain typeⅡchalcone isomerase(CHI)could be further divided into CHI1A and CHI1B clades,which resulted from the products of tandem duplication.Furthermore,the duplicated CHI genes exhibited exon–intron structural divergences evolved through exon/intron gain/loss and insertion/deletion.Knocking down CHI1B significantly reduced nodulation in Glycine max(soybean)and Medicago truncatula;whereas,knocking down its duplication gene CHI1A had no effect on nodulation.Therefore,Leguminosae-gain typeⅡCHI participated in RNS and the duplicated CHI1A and CHI1B genes exhibited RNS functional divergence.This study provides functional insights into Leguminosae-gain genetic innovation and sub-functionalization after gene duplication that contribute to the evolution and adaptation of RNS in Leguminosae.
文摘目的初步探究肾虚证亚健康人群认知功能改变的神经影像学机制。方法对35例肾虚型亚健康受试者和35例健康对照进行重复性成套神经心理状态测验(Repeatable Battery for the Assessment of Neuropsychological Status,RBANS)及评估,并进行静息态功能磁共振扫描。应用皮质分析方法计算两组被试脑区的低频震荡振幅(amplitude of low frequency fluctuations,ALFF)值和分数低频振幅(fractional ALFF,fALFF)值,并分析异常功能活动脑区与认知功能及临床症状之间的相关性。结果与健康受试者相比,肾虚型亚健康受试者的即刻记忆、注意编码及RBANS测验总分显著降低;并发现其左侧初级视觉皮质、左侧背侧枕叶皮质及右侧辅助运动皮质等脑区的ALFF/fALFF值异常改变。此外,左侧背侧枕叶皮质、右侧额叶眼动区ALFF值,左侧初级视觉皮质fALFF值与肾虚证积分均成正比。右侧额叶眼动区ALFF值,右侧辅助运动皮质fALFF值与测验总分成反比。结论肾虚型亚健康受试者的记忆与注意功能受损,左侧枕叶和右侧额叶等多个脑区神经活动的改变可能是肾虚证亚健康人群认知功能改变的潜在神经机制。
