The quantity of soil microbes and the structure of ammonium oxidizing bacterial （AOB） community were analyzed using the dilution plate counting and most probable number method （MPN）, and denaturing gradient gel el...The quantity of soil microbes and the structure of ammonium oxidizing bacterial （AOB） community were analyzed using the dilution plate counting and most probable number method （MPN）, and denaturing gradient gel electrophoresis （DGGE）, respectively. Fertilizer application tended to increase the number of soil microbes and alter the AOB community compared to the control with no fertilizer application （CK）. Among the eight fertilizer treatments, soil samples from the treatments of mineral fertilizers （e.g., N, P, K） in combination with farmyard manure （M） had greater number.s of soil microbes and more complex structure of AOB community than those receiving mineral fertilizers alone. The principal component analyses （PCA） for ammonium oxidizing bacterial community structure showed that the eight fertilizer treatments could be divided into two PCA groups （PCA1 and PCA2）. For the soil sampled after rice harvest, PCA1 included NP, NM, NPM and NPKM fertilizer treatments, while PCA2 was consisted of CK, N, M and NPK fertilizer treatments. For soil samples collected after wheat harvest, PCA1 was consisted of M, NM, NPM and NPKM fertilizer treatments, while PCA2 was composed of CK, N, NP and NPK fertilizer treatments. For a given rotation, the richness of AOB community in PCA1 was greater than that in PCA2. In addition, AOB community structure was more complex in the soil after rice harvest than that after wheat harvest. The results indicated that different fertilizer treatments resulted in substantial changes of soil microbe number and AOB community. Furthermore, mineral fertilizers （N, NP, NPK） combined with farmyard manure were effective for increasing the quantity of soil microbes, enriching AOB community, and improving the soil biofertility.展开更多
In semi-arid areas of China,gravel and sand mulch is a farming technique with a long history.In this study,a sample survey was conducted on long term gravel sand mulch observational fields in the Northwest Loess Plate...In semi-arid areas of China,gravel and sand mulch is a farming technique with a long history.In this study,a sample survey was conducted on long term gravel sand mulch observational fields in the Northwest Loess Plateau to determine the effects of long term mulch on soil microbial and soil enzyme activities.We found that after long term gravel-sand mulch,compared with bare ground,soil organic matter,alkali nitrogen,conductivity decreased,while pH and soil moisture increased.Urease,saccharase and catalase decreased with increased mulch thickness,while alkaline phosphatase was reversed.The results of Illumina MiSeq sequencing shows that after gravel-sand mulch,the bacterial and fungal community structure was different from bare land,and the diversity was reduced.Compared with bare land,the bacteria Proteobacteria and Acidobacteria abundance increased with increased thickness,and Actinobacteria was opposite.Also,at the fungal genus level,Fusarium abundance was significantly reduced,and Remersonia was significantly increased,compared with bare land.Redundancy analysis(RDA)revealed that soil environmental factors were important drivers of bacterial community changes.Overall,this study revealed some of the reasons for soil degradation after long term gravel-sand mulch.Therefore,it is recommended that the addition of exogenous soil nutrients after long term gravel-sand can help improve soil quality.展开更多
Studies were conducted to identify candidate soil microbes responsible for observed differences in strawberry vigour at a small spatial scale, which was not associated with visual disease symptoms. Samples were obtain...Studies were conducted to identify candidate soil microbes responsible for observed differences in strawberry vigour at a small spatial scale, which was not associated with visual disease symptoms. Samples were obtained from the soils close to the rhizosphere of ‘big＇ and ‘small＇ plants from small plots which exhibited large local heterogeneity in plant vigour. A metabarcoding approach was used to profile bacterial and fungal compositions, using two primer pairs for 16 S ribosomal RNA genes（16S r DNA） and one for the fungal internal transcribed spacer（ITS） region. Of the two 16 S r DNA primer sets, the 341F/805 R resulted in sequences of better quality. A total 28 operational taxonomic units（OTUs） had differential relative abundance between samples from ‘big＇ and ‘small＇ plants. However, plausible biological explanation was only possible for three fungal OTUs. Two were possible phytopathogens： Verticillium spp. and Alternaria alternata although the latter has never been considered as a main pathogen of strawberry in the UK. For samples from ‘small＇ plants, the abundance of these OTUs was much greater than from ‘big＇ plants. The opposite was true for a mycorrhizal OTU. These results suggest that soil microbes related to crop production can be identified using metabarcoding technique. Further research is needed to assess whether A. alternata and Verticillium spp. could affect strawberry growth in the field.展开更多
Soil microbes are one of the most important determinants of allelopathic effects in the field. However, most studies testing the role of allelopathy in biological invasions did not consider the roles of soil microbes....Soil microbes are one of the most important determinants of allelopathic effects in the field. However, most studies testing the role of allelopathy in biological invasions did not consider the roles of soil microbes. Here we tested the hypothesis that soil microbes which can degrade allelochemicals may accumulate in soils over time by adaptation and therefore increase the degradation of allelochemicals and alleviate the allelopathic effects in biological invasions. As expected, soil microbes signifi- cantly decreased the allelopathic effects of leaf leachates of eight in the nine invasive plant species studied. In addition, Ageratina adenophora showed lower allelopathic effects in soil with long or intermediately invasion history than those in soil with short invasion history. The two main allelo- chemicals of the invader were degraded more rapidly with increasing invasion history in the soil. Correspondingly,biomass and activity of the soil microbes were higher in the soils with long invasion history than in that with short invasion history. Our results indicate that soil microbes may graduaUy adapt to the allelochemicals of Ageratina and alleviate its allelopathic effects and thus support the above hypothesis. It is necessary to consider the effects of soil microbes when testing the roles of allelopathy or the novel weapons hypothesis in biological invasions.展开更多
Objective To study the effect of autotoxicity and the co-effect of autotoxicity and soil microbes from continuous cropping soil on Angelica sinensis growth, root yield and content of essential oils, and soilmicrobalpo...Objective To study the effect of autotoxicity and the co-effect of autotoxicity and soil microbes from continuous cropping soil on Angelica sinensis growth, root yield and content of essential oils, and soilmicrobalpopulation. Methods The pot experiments were conducted upon A. sinensis seedlings in continuous cropping soil. At the different growth stages, we determined the seedlings in growth parameters, root yield, content of essential oils, ethanol extract, and cultivable microbial populations in rhizosphere soil. Results A. sinensis seedlings were significantly inhibited in growth, root yield and quality. Compared with the control, the composition and structure of soil microbes were changed and the diversity indexes of bacteria functional groups were reduced in rhizosphere soil ofA. sinensis. A. sinensiscropping problems were more seriously after the treatment with combination of autotoxicity and soil microbes than with autotoxicity alone. Conclusion The autotoxicityand soil microbes from continuous cropping soil of A. sinensis could cause the continuous cropping obstacle together.展开更多
Aims Linkages formed through aquatic-terrestrial subsidies can play an important role in structuring communities and mediating ecosystem functions.Aquatic-terrestrial subsidies may be especially important in nutrient-...Aims Linkages formed through aquatic-terrestrial subsidies can play an important role in structuring communities and mediating ecosystem functions.Aquatic-terrestrial subsidies may be especially important in nutrient-poor ecosystems,such as the freshwater sand dunes surrounding Lake Michigan.Adult midges emerge from Lake Michigan in the spring,swarm to mate and die.Their carcasses form mounds at the base of plants,where they may in crease plant productivity through their nutrient inputs.However,the effect of aquatic-terrestrial subsidies on plant productivity could depend on other biotic interactions.In particular,soil microbes might play a key role in facilitating the conversion of nutrients to plant-available forms or competing for the nutrients with plants.Methods In a greenhouse experiment,we tested how carcasses from lake emerge nt midges(Chironomidae)and soil microbes indepe ndently and interactively influe need the performance of a common dune grass,Calamovilfa longifolia.To determine whether midges influenced abiotic soil properties,we measured how midge additions influe need soil nutrients and soil moisture.Important Findings Midges greatly increased plant biomass,while soil microbes in flue need the magnitude of this effect.In the absence of soil microbes plant biomass was seven times greater with midges than without midges.However,in the presence of soil microbes,plant biomass was only three times greater.The effect of midges might be driven by their nutrient inputs into the soil,as midges contained 100 times more N,10 times more P and 150 times more K than dune soils did.Our results suggest that soil microbes may be competing with plants for these nutrients.In sum,we found that midges can be an important aquatic-terrestrial subsidy that produces strong,positive effects on plant productivity along the shorelines of Lake Michigan,but that the impact of aquatic-terrestrial subsidies must be considered within the context of the complex interactions that take place within ecological communities.展开更多
In the Loess Plateau of China,land-use pattern is a major factor in controlling underlying biological processes.Additionally,the process of land-use pattern was accompanied by abandoned lands,potentially impacting soi...In the Loess Plateau of China,land-use pattern is a major factor in controlling underlying biological processes.Additionally,the process of land-use pattern was accompanied by abandoned lands,potentially impacting soil microbe.However,limited researches were conducted to study the impacts of land-use patterns on the diversity and community of soil microorganisms in this area.The study aimed to investigate soil microbial community diversity and composition using high-throughput deoxyribonucleic acid(DNA)sequencing under different land-use patterns(apricot tree land,apple tree land,peach tree land,corn land,and abandoned land).The results showed a substantial difference(P<0.050)in bacterial alpha-diversity and beta-diversity between abandoned land and other land-use patterns,with the exception of Shannon index.While fungal beta-diversity was not considerably impacted by land-use patterns,fungal alpha-diversity indices varied significantly.The relative abundance of Actinobacteriota(34.90%),Proteobacteria(20.65%),and Ascomycota(77.42%)varied in soils with different land-use patterns.Soil pH exerted a dominant impact on the soil bacterial communities'composition,whereas soil available phosphorus was the main factor shaping the soil fungal communities'composition.These findings suggest that variations in land-use pattern had resulted in changes to soil properties,subsequently impacting diversity and structure of microbial community in the Loess Plateau.Given the strong interdependence between soil and its microbiota,it is imperative to reclaim abandoned lands to maintain soil fertility and sustain its function,which will have significant ecological service implications,particularly with regards to soil conservation in ecologically vulnerable areas.展开更多
The diversity of vegetation configuration is the key to ecological restoration in open-pit coal mine dump.However,the recovery outcomes of different areas with the same vegetation assemblage pattern are completely dif...The diversity of vegetation configuration is the key to ecological restoration in open-pit coal mine dump.However,the recovery outcomes of different areas with the same vegetation assemblage pattern are completely different after long-term evolution.Therefore,understanding the causes of differential vegetation recovery and the mechanism of plant succession is of great significance to the ecological restoration of mines.Three Pinus tabulaeformis plantations with similar initial site conditions and restoration measures but with different secondary succession processes were selected from the open-pit coal mine dump that has been restored for 30 years.Soil physicochemical properties,enzyme activities,vegetation and microbial features were investigated,while the structural equation models were established to explore the interactions between plants,soil and microbes.The results showed that original vegetation configuration and soil nutrient conditions were altered due to secondary succession.With the advancement of the secondary succession process,the coverage of plants increased from 34.8%to 95.5%(P<0.05),soil organic matter increased from 9.30 g kg^(-1)to 21.13 g kg^(-1)(P<0.05),and total nitrogen increased from 0.38 g kg^(-1)to 1.01 g kg^(-1)(P<0.05).The activities of soil urease and p-glucosidase were increased by 1.7-fold and 53.26%,respectively.Besides,the secondary succession also changed the soil microbial community structure and function.The relative abundance of Nitrospira genus which dominates the nitrification increased 5.2-fold.The results showed that urease andβ-glucosidase promoted the increase of vegetation diversity and biomass by promoting the accumulation of soil organic matter and nitrate nitrogen,which promoted the ecological restoration of mine dumps.展开更多
Nitrogen(N)is an essential nutrient for both plants and soil microbes,but it often has limited availability.Currently,little is known about the effects of different vegetation patch types on the partitioning of N betw...Nitrogen(N)is an essential nutrient for both plants and soil microbes,but it often has limited availability.Currently,little is known about the effects of different vegetation patch types on the partitioning of N between plants and soil microorganisms in grassland ecosystems.In the present study,we performed a^(15)N-labelling experiment(using^(15)N-NO_(3)^(-)and^(15)N-NH_(4)^(+))to investigate N uptake by plant biomass and microbial biomass for five common vegetation patch types in a degraded alpine steppe on the Tibetan Plateau,China.The results showed that plants and soil microorganisms in all patches showed a clear preference for the uptake of NO_(3)^(-).Plants in patches dominated by palatable species absorbed more N than plants in unpalatable species patches,while N uptake in the microbial biomass in unpalatable species patches was higher than that in palatable species patches.For the two soil depths,plants in Poa litwinowiana patches had the highest N uptake(NO_(3)^(-):13.32-51.28 mg m^(-2);NH_(4)^(+):0.35-1.36 mg m^(-2)),whereas microbial biomass in Oxytropis glacialis patches had the highest N uptake(NO_(3)^(-):846.97-1,659.87 mg m^(-2);NH_(4)^(+):108.75-185.14 mg m^(-2))among the five vegetation patch types.For both forms of N,soil microorganisms acquired relatively more N than the plants in the five vegetation patch types(i.e.,the ratio of microbial biomass N uptake to plant biomass N uptake was greater than 1).The N-absorbing capacity of plants decreased,whereas the capacity of soil microorganisms to take up N increased with the degradation of vegetation patches.Microorganisms that compete more strongly for N might reduce the uptake of nutrients by plants in degraded patches,which would not be conducive to the restoration of vegetation in N-limited alpine grasslands.展开更多
In recent years,intensive human activities have increased the intensity of desertification,driving continual desertification process of peripheral meadows.To investigate the effects of restoration on soil microbial co...In recent years,intensive human activities have increased the intensity of desertification,driving continual desertification process of peripheral meadows.To investigate the effects of restoration on soil microbial communities,we analyzed vegetation-soil relationships in the Hulun Buir Sandy Land,northern China.Through the use of high-throughput sequencing,we examined the structure and diversity in the bacterial and fungal communities within the 0-20 cm soil layer after 9-15 a of restoration.Different slope positions were analyzed and spatial heterogeneity was assessed.The results showed progressive improvements in soil properties and vegetation with the increase of restoration duration,and the following order was as follows:bottom slope>middle slope>crest slope.During the restoration in the Hulun Buir Sandy Land,the bacterial communities were dominated by Proteobacteria,Actinobacteria,and Acidobacteria,whereas the fungal communities were dominated by Ascomycota and Basidiomycota.Eutrophic bacterial abundance increased with the restoration duration,whereas oligotrophic bacterial and fungal abundance levels decreased.The soil bacterial abundance significantly increased with the increasing restoration duration,whereas the fungal diversity decreased after 11 a of restoration,except that at the crest slope.Redundancy analysis showed that pH,soil moisture content,total nitrogen,and vegetation-related factors affected the bacterial community structure(45.43%of the total variance explained).Canonical correspondence analysis indicated that pH,total phosphorus,and vegetation-related factors shaped the bacterial community structure(31.82%of the total variance explained).Structural equation modeling highlighted greater bacterial responses(R^(2)=0.49-0.79)to changes in environmental factors than those of fungi(R^(2)=0.20-0.48).The soil bacterial community was driven mainly by pH,soil moisture content,electrical conductivity,plant coverage,and litter dry weight.The abundance and diversity of the soil fungal community were mainly driven by plant coverage,litter dry weight,and herbaceous aboveground biomass,while there was no significant correlation between the soil fungal community structure and environmental factors.These findings highlighted divergent microbial succession patterns and environmental sensitivities during sandy grassland restoration.展开更多
Soil microbes play a major role in ecological processes and are closely associated with the aboveground plant community. In order to understand the effects of vegetation type on the characteristics of soil microbial c...Soil microbes play a major role in ecological processes and are closely associated with the aboveground plant community. In order to understand the effects of vegetation type on the characteristics of soil microbial communities, the soil microbial communities were assessed by plate counts, phospholipid fatty acid （PLFA） and Biolog microplate techniques in five plant communities, i.e., soybean field （SF）, artificial turf （AT）, artificial shrub （AS）, natural shrub （NS）, and maize field （MF） in Jinan, Shandong Province, North China. The results showed that plant diversity had little discernible effect on microbial biomass but a positive impact on the evenness of utilized substrates in Biolog microplate. Legumes could significantly enhance the number of cultural microorganisms, microbial biomass, and community catabolic diversity. Except for SF dominated by legumes, the biomass of fungi and the catabolic diversity of microbial community were higher in less disturbed soil beneath NS than in frequently disturbed soils beneath the other vegetation types. These results confirmed that high number of plant species, legumes, and natural vegetation types tend to support soil microbial communities with higher function. The present study also found a significant correlation between the number of cultured bacteria and catabolic diversity of the bacterial community. Different research methods led to varied results in this study. The combination of several approaches is recommended for accurately describing the characteristics of microbial communities in many respects.展开更多
Soil properties, microbial communities and enzyme activities were studied in soil amended with replicase （RP）-transgenic or non-transgenic papaya under field conditions. Compared with non-transgenic papaya, signific...Soil properties, microbial communities and enzyme activities were studied in soil amended with replicase （RP）-transgenic or non-transgenic papaya under field conditions. Compared with non-transgenic papaya, significant differences （P〈0.05） were observed in total nitrogen in soils grown with transgenic papaya. There were also significant differences （P〈0.05） in the total number of colony forming units （CFUs） of bacteria, actinomycetes and fungi between soils amended with RP-transgenic plants and non-transgenic plants. Compared with non-transgenic papaya, the total CFUs of bacteria, actinomycetes and fungi in soil with transgenic papaya increased by 0.43-1.1, 0.21-0.80 and 0.46-0.73 times respectively. Significantly higher （P〈0.05） CFUs of bacteria, actinomycetes and fungi resistant to kanamycin （Km） were obtained in soils with RP-transgenic papaya than those with non-transgenic papaya in all concentrations of Km. Higher resistance quotients for Km＇ （kanamycin resistant） bacteria, actinomycetes and fungi were found in soil planted with RP-transgenic papaya, and the resistance quotients for Km＇ bacteria, actinomycetes and fungi in soils with transgenic papaya increased 1.6-4.46, 0.63-2.5 and 0.75-2.30 times. RP-transgenic papaya and non-transgenic papaya produced significantly different enzyme activities in arylsulfatase （5.4-5.9x）, polyphenol oxidase （0.7-1.4x）, invertase （0.5-0.79x）, cellulase （0.23-0.35x） and phosphodiesterase （0.16-0.2x）. The former three soil enzymes appeared to be more sensitive to the transgenic papaya than the others, and could be useful parameters in assessing the effects of transgenic papaya. Transgenic papaya could alter soil chemical properties, enzyme activities and microbial communities.展开更多
Distribution characteristics of soil animals, microorganisms and enzymatic activity were studied in the dry red soil and Vertisol ecosystems with different degradation degrees in the Yuanmou dry hot valley of the Jins...Distribution characteristics of soil animals, microorganisms and enzymatic activity were studied in the dry red soil and Vertisol ecosystems with different degradation degrees in the Yuanmou dry hot valley of the Jinsha River, China. Results showed that Hymenoptera, Araneae and Collembola were the dominant groups of soil animals in the plots studied. The numbers of groups and individuals and density of soil animals in the dry red soil series were higher than those in the Vertisol series, and the numbers of individuals and density of soil animals decreased with the degree of soil degradation. Bacteria dominated microbiocoenosis not only in the dry red soils but also in the Vertisols. Microbial numbers of the dry red soil series were higher than those of Vertisol series, and decreased with the degree of soil degradation. The activities of catalase, invertase, urease and alkaline phosphatase declined with the degradation degree and showed a significant decline with depth in the profiles of both the dry red soils and the Vertisols, but activities of polyphenol oxidase and acid and neutral phosphatase showed the same tendencies only in the Vertisols. It was concluded that the characteristics of soil animals, microorganisms and enzymatic activity could be used as the bio-indicators to show the degradation degree of the dry red soils and Vertisols. Correlation among these soil bio-indicators was highly significant.展开更多
The ecological effect of reclaimed water irrigation and fertilizer application on the soil environment is receiving more attention.Soil microbial activity and nitrogen（N）levels are important indicators of the effect...The ecological effect of reclaimed water irrigation and fertilizer application on the soil environment is receiving more attention.Soil microbial activity and nitrogen（N）levels are important indicators of the effect of reclaimed water irrigation on environment.This study evaluated soil physicochemical properties and microbial community structure in soils irrigated with reclaimed water and receiving varied amounts of N fertilizer.The results indicated that the reclaimed water irrigation increased soil electrical conductivity（EC）and soil water content（SWC）.The N treatment has highly significant effect on the ACE,Chao,Shannon（H）and Coverage indices.Based on a 16S ribosomal RNA（16S rRNA）sequence analysis,the Proteobacteria,Gemmatimonadetes and Bacteroidetes were more abundant in soil irrigated with reclaimed water than in soil irrigated with clean water.Stronger clustering of microbial communities using either clean or reclaimed water for irrigation indicated that the type of irrigation water may have a greater influence on the structure of soil microbial community than N fertilizer treatment.Based on a canonical correspondence analysis（CCA）between the species of soil microbes and the chemical properties of the soil,which indicated that nitrate N（NO3-–-N）and total phosphorus（TP）had significant impact on abundance of Verrucomicrobia and Gemmatimonadetes,meanwhile the p H and organic matter（OM）had impact on abundance of Firmicutes and Actinobacteria significantly.It was beneficial to the improvement of soil bacterial activity and fertility under 120 mg kg^-1 N with reclaimed water irrigation.展开更多
Soil microbes may be critical players in determining the allelopathic potential of some plants. Low levels of plant community biodiversity in Eucalyptus plantations have been attributed to the allelopathic potential o...Soil microbes may be critical players in determining the allelopathic potential of some plants. Low levels of plant community biodiversity in Eucalyptus plantations have been attributed to the allelopathic potential of these tree species. The role of soil microbes in the allelopathic effect of leaf leachates of the hybrid tree Eucalyptus grandis x E. urophylla, was tested in Petri dish assays with Brassica chinensis as a receiver plant. Soils were collected from either a local garden (soil A) or a Eucalyptus plantation (soil B) and half of each soil was sterilized to remove microbes. These soils were then treated with E. grandis x E. urophylla leachates for 0-72 h. Seed germination of B. chinensis was significantly inhibited in soils treated with leaf leachates relative to untreated soils. The inhibitory effect of the leaf leachates was more pronounced in sterilized soils. Total phenolic content was obvious lower in nonsterile leachate-treated soils than in sterile soils. Biomass of B. chinensis was negatively correlated with the total phenolic content in soils. Our findings suggest that soil microbes can alleviate the allelopathic potential of Eucalyptus and thereby its negative impact on plant growth.展开更多
Soil microorganisms are sensitive indicator of soil health and quality. Understanding the effects of vegetation biomass and seasonal change on soil microorganisms is vital to evaluate the soil quality and implement ve...Soil microorganisms are sensitive indicator of soil health and quality. Understanding the effects of vegetation biomass and seasonal change on soil microorganisms is vital to evaluate the soil quality and implement vegetation restoration. This study analyzed the soil phospholipid fatty acids(PLFAs) in fresh and withered Kudzu(Pueraria montana var. lobata) vegetation conditions in different seasons. The results showed that vegetation biomass and seasonal change significantly affected microbial biomass and its community structure. Both fresh and withered Kudzu cover significantly increased soil microbial biomass, and the growth effect of microbes in the soil with fresh Kudzu cover was more obvious than that with withered Kudzu cover. Compared with the dry season, the rainy season significantly increased the microbial biomass and the B/F(the ratio of bacterial to fungal PLFAs) ratio but dramatically reduced the G+/G-(the ratio of gram-positive to gram-negative bacteria PLFAs). Kudzu cover and seasonal change had a significant effect on microbial structure in soil covered by higher vegetation biomass. Furthermore, soil temperature and moisture had different correlations with specific microbial biomass in the two seasons. Our findings highlight the effect of Kudzu vine cover on the soil microenvironment and soil microhabitat, enhancing the soil quality in the Dry-hot Valley of Jinsha River, Southwest China.展开更多
Seasonal shifts play an important role in soil microbial community composition. This study examined the hypothesis that soil microbial community structure would vary with seasonal shifts in the Wuyi Mountains in South...Seasonal shifts play an important role in soil microbial community composition. This study examined the hypothesis that soil microbial community structure would vary with seasonal shifts in the Wuyi Mountains in Southeast China, and that two representative tree species （Castanopisi carlesii and Cunninghamia lanceolata） may have different soil microbial community composition. Phospholipids fatty acid analysis （PLFA） of seasonal shifts and was used to assess the effect vegetation types on soil microbial community structure. A total of 22 different PLFAs were identified from all the soil samples. The bacterial PLFAs accounted for 62.37% of the total PLFAs, followed by fungi （28.94%）, and the minimum was actinomycetes （6.41%）. Overall, the level of PLFAs in C. carlesii soil was greater than those in C. lanceolata soil, and significant differences were observed in some seasons. The amounts of total, bacteria, actinomycic and fungal PLFAs significantly changed with the seasons and followed a sequence order （summer 〉 autumn 〉 spring 〉 winter）. The bacteria/fungi PLFAs and G （＋）/G （-） PLFAs of two vegetation types also changed with the seasons and the ratios in summer and autumn were higher than those in spring and winter. The correlation analysis of microbial PLFAs and soil physicochemical properties showed that the total, bacteria, fungal, actinomycic, G （＋） and G （-） PLFAs were significantly positive correlation with TOC, TN, TP, TK and moisture content. We concluded that the seasonal shifts and vegetation types affect soil microbial community composition by changing the soil physicochemical properties.展开更多
The Tibetan Plateau of China is uniquely vulnerable to the global climate change and anthropogenic disturbances.As soil bacteria exert a considerable influence on the ecosystem function,understanding their response to...The Tibetan Plateau of China is uniquely vulnerable to the global climate change and anthropogenic disturbances.As soil bacteria exert a considerable influence on the ecosystem function,understanding their response to different climates and land-use types is important.Here,we characterized the bacterial community composition and diversity across three major ecosystems(cropland,forest,and grassland)in the Sygera Mountains of Tibet,along a typical elevational gradient(3300–4600 m).The abundance of taxa that preferentially inhabit neutral or weak alkaline soil environments(such as Actinobacteria,Thermoleophilia,and some non-acidophilus Acidobacteria)was significantly greater in the cropland than in the forest and grassland.Furthermore,the diversity of soil bacterial communities was also significantly greater in the cropland than in the forest and grassland.We observed a unimodal distribution of bacterial species diversity along the elevation gradient.The dominant phyla Acidobacteria and Proteobacteria exhibited consistent elevational distribution patterns that mirrored the abundance of their most abundant classes,while different patterns were observed for Acidobacteria and Proteobacteria at the class level.Soil pH was the primary edaphic property that regulated bacterial community composition across the different land-use types.Additionally,soil pH was the main factor distinguishing bacterial communities in managed soils(i.e.,cropland)from the communities in the natural environments(i.e.,forest and grassland).In conclusion,land use(particularly anthropogenic disturbances such as cropping)largely controlled soil environment,played a major role in driving bacterial community composition and distribution,and also surpassed climate in affecting bacterial community distribution.展开更多
Semi-sealed preservation of soil samples at different moisture of 4% and 23 %, respectively, was simulated to observe the variations of soil microbial communities and determine the contents and isotopic compositions o...Semi-sealed preservation of soil samples at different moisture of 4% and 23 %, respectively, was simulated to observe the variations of soil microbial communities and determine the contents and isotopic compositions of the total organic carbon and total nitrogen on the 7th and 30th day, respectively. The results show that during preservation, the quantity of microbial communities tended to increase first and then decrease, with a wider variation range at higher moisture （23%）. At the moisture content of 23 %, the microbial communities became more active on the 7th day, but less after 30 days, and their activity was stable with little fluctuation at the moisture content of 4%. However, there were no significant changes in the contents and isotopic compositions of the total organic carbon and total nitrogen. During preservation, the responses of soil microbes to the environment are more sensitive to changes in the total nitrogen and organic carbon contents. It is thus suggested that the variations of microbial communities have not exerted remarkable impacts on the isotope compositions of the total nitrogen and total organic carbon.展开更多
Soil drying-rewetting(DRW) events affect nutrient transformation and microbial community composition; however, little is known about the influence of drying intensity during the DRW events. Therefore, we analyzed soil...Soil drying-rewetting(DRW) events affect nutrient transformation and microbial community composition; however, little is known about the influence of drying intensity during the DRW events. Therefore, we analyzed soil nutrient composition and microbial communities with exposure to various drying intensities during an experimental drying-rewetting event, using a silt loam from a grassland of northern China, where the semi-arid climate exposes soils to a wide range of moisture conditions, and grasslands account for over 40% of the nation's land area. We also conducted a sterilization experiment to examine the contribution of soil microbes to nutrient pulses. Soil drying-rewetting decreased carbon(C) mineralization by 9%–27%. Both monosaccharide and mineral nitrogen(N) contents increased with higher drying intensities(drying to ≤ 10% gravimetric water content), with the increases being 204% and 110% with the highest drying intensity(drying to 2% gravimetric water content), respectively, whereas labile phosphorus(P)only increased(by 105%) with the highest drying intensity. Moreover, levels of microbial biomass C and N and dissolved organic N decreased with increasing drying intensity and were correlated with increases in dissolved organic C and mineral N, respectively,whereas the increases in labile P were not consistent with reductions in microbial biomass P. The sterilization experiment results indicated that microbes were primarily responsible for the C and N pulses, whereas non-microbial factors were the main contributors to the labile P pulses. Phospholipid fatty acid analysis indicated that soil microbes were highly resistant to drying-rewetting events and that drought-resistant groups were probably responsible for nutrient transformation. Therefore, the present study demonstrated that moderate soil drying during drying-rewetting events could improve the mineralization of N, but not P, and that different mechanisms were responsible for the C, N, and P pulses observed during drying-rewetting events.展开更多
基金the National Key Technology R&D Program of China (2006BAD05B06 and 2006BAD 02A14-13)
文摘The quantity of soil microbes and the structure of ammonium oxidizing bacterial （AOB） community were analyzed using the dilution plate counting and most probable number method （MPN）, and denaturing gradient gel electrophoresis （DGGE）, respectively. Fertilizer application tended to increase the number of soil microbes and alter the AOB community compared to the control with no fertilizer application （CK）. Among the eight fertilizer treatments, soil samples from the treatments of mineral fertilizers （e.g., N, P, K） in combination with farmyard manure （M） had greater number.s of soil microbes and more complex structure of AOB community than those receiving mineral fertilizers alone. The principal component analyses （PCA） for ammonium oxidizing bacterial community structure showed that the eight fertilizer treatments could be divided into two PCA groups （PCA1 and PCA2）. For the soil sampled after rice harvest, PCA1 included NP, NM, NPM and NPKM fertilizer treatments, while PCA2 was consisted of CK, N, M and NPK fertilizer treatments. For soil samples collected after wheat harvest, PCA1 was consisted of M, NM, NPM and NPKM fertilizer treatments, while PCA2 was composed of CK, N, NP and NPK fertilizer treatments. For a given rotation, the richness of AOB community in PCA1 was greater than that in PCA2. In addition, AOB community structure was more complex in the soil after rice harvest than that after wheat harvest. The results indicated that different fertilizer treatments resulted in substantial changes of soil microbe number and AOB community. Furthermore, mineral fertilizers （N, NP, NPK） combined with farmyard manure were effective for increasing the quantity of soil microbes, enriching AOB community, and improving the soil biofertility.
基金This study was funded by the National Key R&D Program(Grant No.2016YFC0501403-3).
文摘In semi-arid areas of China,gravel and sand mulch is a farming technique with a long history.In this study,a sample survey was conducted on long term gravel sand mulch observational fields in the Northwest Loess Plateau to determine the effects of long term mulch on soil microbial and soil enzyme activities.We found that after long term gravel-sand mulch,compared with bare ground,soil organic matter,alkali nitrogen,conductivity decreased,while pH and soil moisture increased.Urease,saccharase and catalase decreased with increased mulch thickness,while alkaline phosphatase was reversed.The results of Illumina MiSeq sequencing shows that after gravel-sand mulch,the bacterial and fungal community structure was different from bare land,and the diversity was reduced.Compared with bare land,the bacteria Proteobacteria and Acidobacteria abundance increased with increased thickness,and Actinobacteria was opposite.Also,at the fungal genus level,Fusarium abundance was significantly reduced,and Remersonia was significantly increased,compared with bare land.Redundancy analysis(RDA)revealed that soil environmental factors were important drivers of bacterial community changes.Overall,this study revealed some of the reasons for soil degradation after long term gravel-sand mulch.Therefore,it is recommended that the addition of exogenous soil nutrients after long term gravel-sand can help improve soil quality.
基金funded by Innovate UK(100867)with matching funding from several commercial companiesthe financial assistance of the China Scholarship Council(201306300133 and 201506300012)
文摘Studies were conducted to identify candidate soil microbes responsible for observed differences in strawberry vigour at a small spatial scale, which was not associated with visual disease symptoms. Samples were obtained from the soils close to the rhizosphere of ‘big＇ and ‘small＇ plants from small plots which exhibited large local heterogeneity in plant vigour. A metabarcoding approach was used to profile bacterial and fungal compositions, using two primer pairs for 16 S ribosomal RNA genes（16S r DNA） and one for the fungal internal transcribed spacer（ITS） region. Of the two 16 S r DNA primer sets, the 341F/805 R resulted in sequences of better quality. A total 28 operational taxonomic units（OTUs） had differential relative abundance between samples from ‘big＇ and ‘small＇ plants. However, plausible biological explanation was only possible for three fungal OTUs. Two were possible phytopathogens： Verticillium spp. and Alternaria alternata although the latter has never been considered as a main pathogen of strawberry in the UK. For samples from ‘small＇ plants, the abundance of these OTUs was much greater than from ‘big＇ plants. The opposite was true for a mycorrhizal OTU. These results suggest that soil microbes related to crop production can be identified using metabarcoding technique. Further research is needed to assess whether A. alternata and Verticillium spp. could affect strawberry growth in the field.
基金We are grateful to Da-Wen Li and Ailaoshan Station for Subtropical Forest Ecosystem Studies, Chinese Academy of Sciences for field assistance. This work was supported by the National Natural Science Foundation of China （31100410, 31470575 and 30830027）, the National Key Technology R＆D Program of China （2011BAD30B00）, and Chinese Academy Science 135 Program （XTBG-T01, F01）.
文摘Soil microbes are one of the most important determinants of allelopathic effects in the field. However, most studies testing the role of allelopathy in biological invasions did not consider the roles of soil microbes. Here we tested the hypothesis that soil microbes which can degrade allelochemicals may accumulate in soils over time by adaptation and therefore increase the degradation of allelochemicals and alleviate the allelopathic effects in biological invasions. As expected, soil microbes signifi- cantly decreased the allelopathic effects of leaf leachates of eight in the nine invasive plant species studied. In addition, Ageratina adenophora showed lower allelopathic effects in soil with long or intermediately invasion history than those in soil with short invasion history. The two main allelo- chemicals of the invader were degraded more rapidly with increasing invasion history in the soil. Correspondingly,biomass and activity of the soil microbes were higher in the soils with long invasion history than in that with short invasion history. Our results indicate that soil microbes may graduaUy adapt to the allelochemicals of Ageratina and alleviate its allelopathic effects and thus support the above hypothesis. It is necessary to consider the effects of soil microbes when testing the roles of allelopathy or the novel weapons hypothesis in biological invasions.
基金Natural Science Foundation of China(31060182)Agricultural Biotechnology Research and Application Development of Gansu province(GNSW-2010-18)
文摘Objective To study the effect of autotoxicity and the co-effect of autotoxicity and soil microbes from continuous cropping soil on Angelica sinensis growth, root yield and content of essential oils, and soilmicrobalpopulation. Methods The pot experiments were conducted upon A. sinensis seedlings in continuous cropping soil. At the different growth stages, we determined the seedlings in growth parameters, root yield, content of essential oils, ethanol extract, and cultivable microbial populations in rhizosphere soil. Results A. sinensis seedlings were significantly inhibited in growth, root yield and quality. Compared with the control, the composition and structure of soil microbes were changed and the diversity indexes of bacteria functional groups were reduced in rhizosphere soil ofA. sinensis. A. sinensiscropping problems were more seriously after the treatment with combination of autotoxicity and soil microbes than with autotoxicity alone. Conclusion The autotoxicityand soil microbes from continuous cropping soil of A. sinensis could cause the continuous cropping obstacle together.
基金supported by the Cougar Initiative to Engage(CITE)program(to A.B.G.)the Texas Ecological Laboratory(Ecolab)program(to H.L.)the National Science Foundation(DEB-1754287 to K.M.C.).
文摘Aims Linkages formed through aquatic-terrestrial subsidies can play an important role in structuring communities and mediating ecosystem functions.Aquatic-terrestrial subsidies may be especially important in nutrient-poor ecosystems,such as the freshwater sand dunes surrounding Lake Michigan.Adult midges emerge from Lake Michigan in the spring,swarm to mate and die.Their carcasses form mounds at the base of plants,where they may in crease plant productivity through their nutrient inputs.However,the effect of aquatic-terrestrial subsidies on plant productivity could depend on other biotic interactions.In particular,soil microbes might play a key role in facilitating the conversion of nutrients to plant-available forms or competing for the nutrients with plants.Methods In a greenhouse experiment,we tested how carcasses from lake emerge nt midges(Chironomidae)and soil microbes indepe ndently and interactively influe need the performance of a common dune grass,Calamovilfa longifolia.To determine whether midges influenced abiotic soil properties,we measured how midge additions influe need soil nutrients and soil moisture.Important Findings Midges greatly increased plant biomass,while soil microbes in flue need the magnitude of this effect.In the absence of soil microbes plant biomass was seven times greater with midges than without midges.However,in the presence of soil microbes,plant biomass was only three times greater.The effect of midges might be driven by their nutrient inputs into the soil,as midges contained 100 times more N,10 times more P and 150 times more K than dune soils did.Our results suggest that soil microbes may be competing with plants for these nutrients.In sum,we found that midges can be an important aquatic-terrestrial subsidy that produces strong,positive effects on plant productivity along the shorelines of Lake Michigan,but that the impact of aquatic-terrestrial subsidies must be considered within the context of the complex interactions that take place within ecological communities.
基金supported by the Science and Technology Planning Project of Gansu Province,China(23ZDKA017).
文摘In the Loess Plateau of China,land-use pattern is a major factor in controlling underlying biological processes.Additionally,the process of land-use pattern was accompanied by abandoned lands,potentially impacting soil microbe.However,limited researches were conducted to study the impacts of land-use patterns on the diversity and community of soil microorganisms in this area.The study aimed to investigate soil microbial community diversity and composition using high-throughput deoxyribonucleic acid(DNA)sequencing under different land-use patterns(apricot tree land,apple tree land,peach tree land,corn land,and abandoned land).The results showed a substantial difference(P<0.050)in bacterial alpha-diversity and beta-diversity between abandoned land and other land-use patterns,with the exception of Shannon index.While fungal beta-diversity was not considerably impacted by land-use patterns,fungal alpha-diversity indices varied significantly.The relative abundance of Actinobacteriota(34.90%),Proteobacteria(20.65%),and Ascomycota(77.42%)varied in soils with different land-use patterns.Soil pH exerted a dominant impact on the soil bacterial communities'composition,whereas soil available phosphorus was the main factor shaping the soil fungal communities'composition.These findings suggest that variations in land-use pattern had resulted in changes to soil properties,subsequently impacting diversity and structure of microbial community in the Loess Plateau.Given the strong interdependence between soil and its microbiota,it is imperative to reclaim abandoned lands to maintain soil fertility and sustain its function,which will have significant ecological service implications,particularly with regards to soil conservation in ecologically vulnerable areas.
基金supported by the National Natural Science Foundation of China(Grant Nos.41807515,41907405,and 51974313)the Postgraduate Research&Practice Innovation Program of Jiangsu Province(Grant No.KYCX21-2118).
文摘The diversity of vegetation configuration is the key to ecological restoration in open-pit coal mine dump.However,the recovery outcomes of different areas with the same vegetation assemblage pattern are completely different after long-term evolution.Therefore,understanding the causes of differential vegetation recovery and the mechanism of plant succession is of great significance to the ecological restoration of mines.Three Pinus tabulaeformis plantations with similar initial site conditions and restoration measures but with different secondary succession processes were selected from the open-pit coal mine dump that has been restored for 30 years.Soil physicochemical properties,enzyme activities,vegetation and microbial features were investigated,while the structural equation models were established to explore the interactions between plants,soil and microbes.The results showed that original vegetation configuration and soil nutrient conditions were altered due to secondary succession.With the advancement of the secondary succession process,the coverage of plants increased from 34.8%to 95.5%(P<0.05),soil organic matter increased from 9.30 g kg^(-1)to 21.13 g kg^(-1)(P<0.05),and total nitrogen increased from 0.38 g kg^(-1)to 1.01 g kg^(-1)(P<0.05).The activities of soil urease and p-glucosidase were increased by 1.7-fold and 53.26%,respectively.Besides,the secondary succession also changed the soil microbial community structure and function.The relative abundance of Nitrospira genus which dominates the nitrification increased 5.2-fold.The results showed that urease andβ-glucosidase promoted the increase of vegetation diversity and biomass by promoting the accumulation of soil organic matter and nitrate nitrogen,which promoted the ecological restoration of mine dumps.
基金supported by the Second Tibetan Plateau Scientific Expedition and Research Program,China(2019QZKK0404)the National Natural Science Foundation of China(42271070)+1 种基金the West Light Scholar of Chinese Academy of Sciences(xbzg-zdsys-202202)the Technology Major Project of Tibetan Autonomous Region of China(XZ202201ZD0005G01)。
文摘Nitrogen(N)is an essential nutrient for both plants and soil microbes,but it often has limited availability.Currently,little is known about the effects of different vegetation patch types on the partitioning of N between plants and soil microorganisms in grassland ecosystems.In the present study,we performed a^(15)N-labelling experiment(using^(15)N-NO_(3)^(-)and^(15)N-NH_(4)^(+))to investigate N uptake by plant biomass and microbial biomass for five common vegetation patch types in a degraded alpine steppe on the Tibetan Plateau,China.The results showed that plants and soil microorganisms in all patches showed a clear preference for the uptake of NO_(3)^(-).Plants in patches dominated by palatable species absorbed more N than plants in unpalatable species patches,while N uptake in the microbial biomass in unpalatable species patches was higher than that in palatable species patches.For the two soil depths,plants in Poa litwinowiana patches had the highest N uptake(NO_(3)^(-):13.32-51.28 mg m^(-2);NH_(4)^(+):0.35-1.36 mg m^(-2)),whereas microbial biomass in Oxytropis glacialis patches had the highest N uptake(NO_(3)^(-):846.97-1,659.87 mg m^(-2);NH_(4)^(+):108.75-185.14 mg m^(-2))among the five vegetation patch types.For both forms of N,soil microorganisms acquired relatively more N than the plants in the five vegetation patch types(i.e.,the ratio of microbial biomass N uptake to plant biomass N uptake was greater than 1).The N-absorbing capacity of plants decreased,whereas the capacity of soil microorganisms to take up N increased with the degradation of vegetation patches.Microorganisms that compete more strongly for N might reduce the uptake of nutrients by plants in degraded patches,which would not be conducive to the restoration of vegetation in N-limited alpine grasslands.
基金supported by the National Ecological Environment Survey and Assessment(2024-vertical-0107)the Fundamental Research Funds for the Central Public-interest Scientific Institution(2023YSKY-26)the Hulun Buir Grassland Ecological Restoration Comprehensive Survey Project(DD20230474).
文摘In recent years,intensive human activities have increased the intensity of desertification,driving continual desertification process of peripheral meadows.To investigate the effects of restoration on soil microbial communities,we analyzed vegetation-soil relationships in the Hulun Buir Sandy Land,northern China.Through the use of high-throughput sequencing,we examined the structure and diversity in the bacterial and fungal communities within the 0-20 cm soil layer after 9-15 a of restoration.Different slope positions were analyzed and spatial heterogeneity was assessed.The results showed progressive improvements in soil properties and vegetation with the increase of restoration duration,and the following order was as follows:bottom slope>middle slope>crest slope.During the restoration in the Hulun Buir Sandy Land,the bacterial communities were dominated by Proteobacteria,Actinobacteria,and Acidobacteria,whereas the fungal communities were dominated by Ascomycota and Basidiomycota.Eutrophic bacterial abundance increased with the restoration duration,whereas oligotrophic bacterial and fungal abundance levels decreased.The soil bacterial abundance significantly increased with the increasing restoration duration,whereas the fungal diversity decreased after 11 a of restoration,except that at the crest slope.Redundancy analysis showed that pH,soil moisture content,total nitrogen,and vegetation-related factors affected the bacterial community structure(45.43%of the total variance explained).Canonical correspondence analysis indicated that pH,total phosphorus,and vegetation-related factors shaped the bacterial community structure(31.82%of the total variance explained).Structural equation modeling highlighted greater bacterial responses(R^(2)=0.49-0.79)to changes in environmental factors than those of fungi(R^(2)=0.20-0.48).The soil bacterial community was driven mainly by pH,soil moisture content,electrical conductivity,plant coverage,and litter dry weight.The abundance and diversity of the soil fungal community were mainly driven by plant coverage,litter dry weight,and herbaceous aboveground biomass,while there was no significant correlation between the soil fungal community structure and environmental factors.These findings highlighted divergent microbial succession patterns and environmental sensitivities during sandy grassland restoration.
基金Project supported by the Outstanding Young Scientists Foundation Grant of Shandong Province (No.2005BS08010)China Geological Survey Project (No.1212010310306)Key Project of Natural Science Foundation of Shandong Province (No.Z2006D04).
文摘Soil microbes play a major role in ecological processes and are closely associated with the aboveground plant community. In order to understand the effects of vegetation type on the characteristics of soil microbial communities, the soil microbial communities were assessed by plate counts, phospholipid fatty acid （PLFA） and Biolog microplate techniques in five plant communities, i.e., soybean field （SF）, artificial turf （AT）, artificial shrub （AS）, natural shrub （NS）, and maize field （MF） in Jinan, Shandong Province, North China. The results showed that plant diversity had little discernible effect on microbial biomass but a positive impact on the evenness of utilized substrates in Biolog microplate. Legumes could significantly enhance the number of cultural microorganisms, microbial biomass, and community catabolic diversity. Except for SF dominated by legumes, the biomass of fungi and the catabolic diversity of microbial community were higher in less disturbed soil beneath NS than in frequently disturbed soils beneath the other vegetation types. These results confirmed that high number of plant species, legumes, and natural vegetation types tend to support soil microbial communities with higher function. The present study also found a significant correlation between the number of cultured bacteria and catabolic diversity of the bacterial community. Different research methods led to varied results in this study. The combination of several approaches is recommended for accurately describing the characteristics of microbial communities in many respects.
文摘Soil properties, microbial communities and enzyme activities were studied in soil amended with replicase （RP）-transgenic or non-transgenic papaya under field conditions. Compared with non-transgenic papaya, significant differences （P〈0.05） were observed in total nitrogen in soils grown with transgenic papaya. There were also significant differences （P〈0.05） in the total number of colony forming units （CFUs） of bacteria, actinomycetes and fungi between soils amended with RP-transgenic plants and non-transgenic plants. Compared with non-transgenic papaya, the total CFUs of bacteria, actinomycetes and fungi in soil with transgenic papaya increased by 0.43-1.1, 0.21-0.80 and 0.46-0.73 times respectively. Significantly higher （P〈0.05） CFUs of bacteria, actinomycetes and fungi resistant to kanamycin （Km） were obtained in soils with RP-transgenic papaya than those with non-transgenic papaya in all concentrations of Km. Higher resistance quotients for Km＇ （kanamycin resistant） bacteria, actinomycetes and fungi were found in soil planted with RP-transgenic papaya, and the resistance quotients for Km＇ bacteria, actinomycetes and fungi in soils with transgenic papaya increased 1.6-4.46, 0.63-2.5 and 0.75-2.30 times. RP-transgenic papaya and non-transgenic papaya produced significantly different enzyme activities in arylsulfatase （5.4-5.9x）, polyphenol oxidase （0.7-1.4x）, invertase （0.5-0.79x）, cellulase （0.23-0.35x） and phosphodiesterase （0.16-0.2x）. The former three soil enzymes appeared to be more sensitive to the transgenic papaya than the others, and could be useful parameters in assessing the effects of transgenic papaya. Transgenic papaya could alter soil chemical properties, enzyme activities and microbial communities.
基金Project supported by the Foundation for 100 Distinguished Young Scientists, the Chinese Academy of Sciences (No. B010108) the Foundation for the Cooperation Between the Chinese Academy of Sciences Yunnan Province.
文摘Distribution characteristics of soil animals, microorganisms and enzymatic activity were studied in the dry red soil and Vertisol ecosystems with different degradation degrees in the Yuanmou dry hot valley of the Jinsha River, China. Results showed that Hymenoptera, Araneae and Collembola were the dominant groups of soil animals in the plots studied. The numbers of groups and individuals and density of soil animals in the dry red soil series were higher than those in the Vertisol series, and the numbers of individuals and density of soil animals decreased with the degree of soil degradation. Bacteria dominated microbiocoenosis not only in the dry red soils but also in the Vertisols. Microbial numbers of the dry red soil series were higher than those of Vertisol series, and decreased with the degree of soil degradation. The activities of catalase, invertase, urease and alkaline phosphatase declined with the degradation degree and showed a significant decline with depth in the profiles of both the dry red soils and the Vertisols, but activities of polyphenol oxidase and acid and neutral phosphatase showed the same tendencies only in the Vertisols. It was concluded that the characteristics of soil animals, microorganisms and enzymatic activity could be used as the bio-indicators to show the degradation degree of the dry red soils and Vertisols. Correlation among these soil bio-indicators was highly significant.
基金the financial support for this research from the National High-Tech R&D Program of China (2012AA101404)the National Natural Science Foundation of China (51209208, 51479201)
文摘The ecological effect of reclaimed water irrigation and fertilizer application on the soil environment is receiving more attention.Soil microbial activity and nitrogen（N）levels are important indicators of the effect of reclaimed water irrigation on environment.This study evaluated soil physicochemical properties and microbial community structure in soils irrigated with reclaimed water and receiving varied amounts of N fertilizer.The results indicated that the reclaimed water irrigation increased soil electrical conductivity（EC）and soil water content（SWC）.The N treatment has highly significant effect on the ACE,Chao,Shannon（H）and Coverage indices.Based on a 16S ribosomal RNA（16S rRNA）sequence analysis,the Proteobacteria,Gemmatimonadetes and Bacteroidetes were more abundant in soil irrigated with reclaimed water than in soil irrigated with clean water.Stronger clustering of microbial communities using either clean or reclaimed water for irrigation indicated that the type of irrigation water may have a greater influence on the structure of soil microbial community than N fertilizer treatment.Based on a canonical correspondence analysis（CCA）between the species of soil microbes and the chemical properties of the soil,which indicated that nitrate N（NO3-–-N）and total phosphorus（TP）had significant impact on abundance of Verrucomicrobia and Gemmatimonadetes,meanwhile the p H and organic matter（OM）had impact on abundance of Firmicutes and Actinobacteria significantly.It was beneficial to the improvement of soil bacterial activity and fertility under 120 mg kg^-1 N with reclaimed water irrigation.
基金supported by the Sci-technology program of Guangxi Province(No.Guikezhong 1347001)
文摘Soil microbes may be critical players in determining the allelopathic potential of some plants. Low levels of plant community biodiversity in Eucalyptus plantations have been attributed to the allelopathic potential of these tree species. The role of soil microbes in the allelopathic effect of leaf leachates of the hybrid tree Eucalyptus grandis x E. urophylla, was tested in Petri dish assays with Brassica chinensis as a receiver plant. Soils were collected from either a local garden (soil A) or a Eucalyptus plantation (soil B) and half of each soil was sterilized to remove microbes. These soils were then treated with E. grandis x E. urophylla leachates for 0-72 h. Seed germination of B. chinensis was significantly inhibited in soils treated with leaf leachates relative to untreated soils. The inhibitory effect of the leaf leachates was more pronounced in sterilized soils. Total phenolic content was obvious lower in nonsterile leachate-treated soils than in sterile soils. Biomass of B. chinensis was negatively correlated with the total phenolic content in soils. Our findings suggest that soil microbes can alleviate the allelopathic potential of Eucalyptus and thereby its negative impact on plant growth.
基金supported by the National Key Research and Development Program of China (2017YFC0505102)the National Basic Research Programme (973 Programme) of China (2015CB452704)+1 种基金the National Natural Science Foundation of China (No.41571277)the Key Programme of the “Western Light” Talents Cultivation programme of the Chinese Academy of Sciences (2014)
文摘Soil microorganisms are sensitive indicator of soil health and quality. Understanding the effects of vegetation biomass and seasonal change on soil microorganisms is vital to evaluate the soil quality and implement vegetation restoration. This study analyzed the soil phospholipid fatty acids(PLFAs) in fresh and withered Kudzu(Pueraria montana var. lobata) vegetation conditions in different seasons. The results showed that vegetation biomass and seasonal change significantly affected microbial biomass and its community structure. Both fresh and withered Kudzu cover significantly increased soil microbial biomass, and the growth effect of microbes in the soil with fresh Kudzu cover was more obvious than that with withered Kudzu cover. Compared with the dry season, the rainy season significantly increased the microbial biomass and the B/F(the ratio of bacterial to fungal PLFAs) ratio but dramatically reduced the G+/G-(the ratio of gram-positive to gram-negative bacteria PLFAs). Kudzu cover and seasonal change had a significant effect on microbial structure in soil covered by higher vegetation biomass. Furthermore, soil temperature and moisture had different correlations with specific microbial biomass in the two seasons. Our findings highlight the effect of Kudzu vine cover on the soil microenvironment and soil microhabitat, enhancing the soil quality in the Dry-hot Valley of Jinsha River, Southwest China.
基金supported by the National Natural Science Foundation of China (Grant No.31500443)Fujian Province Department of Education Foundation (Grant No.JA15178)
文摘Seasonal shifts play an important role in soil microbial community composition. This study examined the hypothesis that soil microbial community structure would vary with seasonal shifts in the Wuyi Mountains in Southeast China, and that two representative tree species （Castanopisi carlesii and Cunninghamia lanceolata） may have different soil microbial community composition. Phospholipids fatty acid analysis （PLFA） of seasonal shifts and was used to assess the effect vegetation types on soil microbial community structure. A total of 22 different PLFAs were identified from all the soil samples. The bacterial PLFAs accounted for 62.37% of the total PLFAs, followed by fungi （28.94%）, and the minimum was actinomycetes （6.41%）. Overall, the level of PLFAs in C. carlesii soil was greater than those in C. lanceolata soil, and significant differences were observed in some seasons. The amounts of total, bacteria, actinomycic and fungal PLFAs significantly changed with the seasons and followed a sequence order （summer 〉 autumn 〉 spring 〉 winter）. The bacteria/fungi PLFAs and G （＋）/G （-） PLFAs of two vegetation types also changed with the seasons and the ratios in summer and autumn were higher than those in spring and winter. The correlation analysis of microbial PLFAs and soil physicochemical properties showed that the total, bacteria, fungal, actinomycic, G （＋） and G （-） PLFAs were significantly positive correlation with TOC, TN, TP, TK and moisture content. We concluded that the seasonal shifts and vegetation types affect soil microbial community composition by changing the soil physicochemical properties.
基金supported by the National Natural Science Foundation of China(Nos.41930754 and 41661061)the Natural Science Foundation of Tibet Autonomous Region of China(Nos.XZ2018ZRG-34(Z))
文摘The Tibetan Plateau of China is uniquely vulnerable to the global climate change and anthropogenic disturbances.As soil bacteria exert a considerable influence on the ecosystem function,understanding their response to different climates and land-use types is important.Here,we characterized the bacterial community composition and diversity across three major ecosystems(cropland,forest,and grassland)in the Sygera Mountains of Tibet,along a typical elevational gradient(3300–4600 m).The abundance of taxa that preferentially inhabit neutral or weak alkaline soil environments(such as Actinobacteria,Thermoleophilia,and some non-acidophilus Acidobacteria)was significantly greater in the cropland than in the forest and grassland.Furthermore,the diversity of soil bacterial communities was also significantly greater in the cropland than in the forest and grassland.We observed a unimodal distribution of bacterial species diversity along the elevation gradient.The dominant phyla Acidobacteria and Proteobacteria exhibited consistent elevational distribution patterns that mirrored the abundance of their most abundant classes,while different patterns were observed for Acidobacteria and Proteobacteria at the class level.Soil pH was the primary edaphic property that regulated bacterial community composition across the different land-use types.Additionally,soil pH was the main factor distinguishing bacterial communities in managed soils(i.e.,cropland)from the communities in the natural environments(i.e.,forest and grassland).In conclusion,land use(particularly anthropogenic disturbances such as cropping)largely controlled soil environment,played a major role in driving bacterial community composition and distribution,and also surpassed climate in affecting bacterial community distribution.
基金supported by the National Natural Science Foundation of China (Grant no.40772112 and 40302024)the President Foundation of Graduate University of the Chinese Academy of Sciences.
文摘Semi-sealed preservation of soil samples at different moisture of 4% and 23 %, respectively, was simulated to observe the variations of soil microbial communities and determine the contents and isotopic compositions of the total organic carbon and total nitrogen on the 7th and 30th day, respectively. The results show that during preservation, the quantity of microbial communities tended to increase first and then decrease, with a wider variation range at higher moisture （23%）. At the moisture content of 23 %, the microbial communities became more active on the 7th day, but less after 30 days, and their activity was stable with little fluctuation at the moisture content of 4%. However, there were no significant changes in the contents and isotopic compositions of the total organic carbon and total nitrogen. During preservation, the responses of soil microbes to the environment are more sensitive to changes in the total nitrogen and organic carbon contents. It is thus suggested that the variations of microbial communities have not exerted remarkable impacts on the isotope compositions of the total nitrogen and total organic carbon.
基金supported by the Scientific and Technological Innovation Fund of Shanxi Agricultural University,China(No.2017YJ17)the Outstanding Doctor Funding Award of Shanxi Province,China(No.SXYBKY201720)+2 种基金the National Basic Research Program(973 Program)of China(No.2013CB127403)the Strategic Priority Research Program of Chinese Academy of Sciences(No.XDB15020402)the National Natural Science Foundation of China(No.41571130061)
文摘Soil drying-rewetting(DRW) events affect nutrient transformation and microbial community composition; however, little is known about the influence of drying intensity during the DRW events. Therefore, we analyzed soil nutrient composition and microbial communities with exposure to various drying intensities during an experimental drying-rewetting event, using a silt loam from a grassland of northern China, where the semi-arid climate exposes soils to a wide range of moisture conditions, and grasslands account for over 40% of the nation's land area. We also conducted a sterilization experiment to examine the contribution of soil microbes to nutrient pulses. Soil drying-rewetting decreased carbon(C) mineralization by 9%–27%. Both monosaccharide and mineral nitrogen(N) contents increased with higher drying intensities(drying to ≤ 10% gravimetric water content), with the increases being 204% and 110% with the highest drying intensity(drying to 2% gravimetric water content), respectively, whereas labile phosphorus(P)only increased(by 105%) with the highest drying intensity. Moreover, levels of microbial biomass C and N and dissolved organic N decreased with increasing drying intensity and were correlated with increases in dissolved organic C and mineral N, respectively,whereas the increases in labile P were not consistent with reductions in microbial biomass P. The sterilization experiment results indicated that microbes were primarily responsible for the C and N pulses, whereas non-microbial factors were the main contributors to the labile P pulses. Phospholipid fatty acid analysis indicated that soil microbes were highly resistant to drying-rewetting events and that drought-resistant groups were probably responsible for nutrient transformation. Therefore, the present study demonstrated that moderate soil drying during drying-rewetting events could improve the mineralization of N, but not P, and that different mechanisms were responsible for the C, N, and P pulses observed during drying-rewetting events.
