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Coulomb attraction driven spontaneous molecule-hotspot pairing enables universal,fast,and large-scale uniform single-molecule Raman spectroscopy 被引量:1
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作者 Lihong Hong Haiyao Yang +2 位作者 Jianzhi Zhang Zihan Gao Zhi-Yuan Li 《Opto-Electronic Advances》 2025年第7期37-49,共13页
Raman spectroscopy offers a great power to detect,analyze and identify molecules,and monitor their temporal dynamics and evolution when combined with single-molecule surface-enhanced Raman scattering(SM-SERS)substrate... Raman spectroscopy offers a great power to detect,analyze and identify molecules,and monitor their temporal dynamics and evolution when combined with single-molecule surface-enhanced Raman scattering(SM-SERS)substrates.Here we present a SM-SERS scheme that involves simultaneously giant chemical enhancement from WS22D materials,giant electromagnetic enhancement from plasmonic nanogap hot spot,and inhibition of molecular fluorescence influence under near-infrared laser illumination.Remarkably we find Coulomb attraction between analyte and gold nanoparticle can trigger spontaneous formation of molecule-hotspot pairing with high precision,stability and robustness.The scheme has enabled realization of universal,robust,fast,and large-scale uniform SM-SERS detection for three Raman molecules of rhodamine B,rhodamine 6G,and crystal violet with a very low detection limit of 10−16 M and at a very fast spectrum acquisition time of 50 ms. 展开更多
关键词 single-molecule Raman spectroscopy Coulomb attractions electromagnetic enhancement chemical enhancement near-infrared laser illumination
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Single-molecule Study Reveals that Sodium Alginate is Hydrophobic
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作者 Chen-Xi Gu Rui-Xue Li +4 位作者 Wen-Tao Yuan Jiu-Long Zhou Yu-Xi Duan Yu Bao Shu-Xun Cui 《Chinese Journal of Polymer Science》 2025年第3期439-446,共8页
Sodium alginate(SA)is generally considered highly hydrophilic due to two hydroxyl groups and a carboxylate group on each pyranose ring.However,SA will form a gel after dissolving in water for a certain period.The two ... Sodium alginate(SA)is generally considered highly hydrophilic due to two hydroxyl groups and a carboxylate group on each pyranose ring.However,SA will form a gel after dissolving in water for a certain period.The two properties of SA,hydrophilicity and gelation,seem to be paradoxical.In this study,to explore the mechanism behind these paradoxical properties,the single-chain behaviors of SA in various liquid environments have been investigated by using single-molecule force spectroscopy(SMFS).In nonpolar solvents such as nonane,SA exhibits its single-chain inherent elasticity consistent with the theoretical elasticity derived from quantum mechanical(QM)calculations.Notably,the experimental curve of SA obtained in water shows a long plateau in the low force region.Further research reveals that this phenomenon is driven by the hydrophobic effect.Additionally,SA shows greater rigidity than its inherent elasticity in the middle and high force regions due to electrostatic repulsion between carboxylate groups on adjacent sugar rings.Comparative single-molecule studies suggest that SA exhibits considerable hydrophobicity,offering new insights into the gelation process in water. 展开更多
关键词 Sodium alginate HYDROPHOBICITY Inherent elasticity single-molecule force spectroscopy
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Physical properties of transition metal complexes in single-molecule junctions
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作者 Ping Duan Zi-Qi Song +2 位作者 Ming-Liang Li Chuan-Cheng Jia Xue-Feng Guo 《Rare Metals》 2025年第7期4479-4506,共28页
Transition metal possesses a unique d-orbital electronic structure,which imparts a diverse range of physical and chemical properties.These properties render them significant in fields such as chemistry and materials s... Transition metal possesses a unique d-orbital electronic structure,which imparts a diverse range of physical and chemical properties.These properties render them significant in fields such as chemistry and materials science.The distinctive optical,electrical,and magnetic properties of these complexes can be attributed to the variations in the quantity of d-orbital electrons,thereby influencing their spin and orbital characteristics.The d-orbitals facilitate the formation of stable multidirectional bonds with ligands,resulting in a variety of geometric structures and rich coordination chemistry.These interactions result in variations in energy levels,thereby producing diverse electrical properties,including low attenuation coefficients,high rectification ratios,and unique multichannel transmission.Moreover,the unpaired electrons inthe d-orbitals can give rise to diverse magnetic behaviors,leading to magnetic effects such as spin-related interfaces,switches,and magnetoresistance.This paves the way for extensive possibilities in the design and application of single-molecule devices.This review elaborates on singlemolecule physical properties of transition metal complexes,including length attenuation,rectification,multi-channel transmission,thermoelectric effect,and spin regulation,which are vital for the functionalization and regulation of molecular electronics.In addition,this review also explores the correlation between these physical properties and the electronic structure of transition metals,discussing the broad prospects of transition metal complexes in the fields of nanoelectronics,optoelectronics,and quantum technology. 展开更多
关键词 Transition metal complexes d-orbital electrons single-molecule devices Physical properties SPIN
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Effect of side group on mechanically induced conductance switching in 4,40-dipyridyl-based single-molecule junctions
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作者 Zhen Wan Chang-Feng Zheng +5 位作者 Lin Liu Yun-Long Ge Guang-Ping Zhang Shuai Qiu Hui Wang Zong-Liang Li 《Chinese Physics B》 2025年第8期678-684,共7页
The forming processes of 4,40-dipyridyl-based single-molecule junctions and mechanically induced conductance switching as well as the side-group effects are systematically investigated by applying the ab initio-based ... The forming processes of 4,40-dipyridyl-based single-molecule junctions and mechanically induced conductance switching as well as the side-group effects are systematically investigated by applying the ab initio-based adiabatic geometric optimization method and the one-dimensional transmission combined with three-dimensional correction approximation(OTCTCA)method.The numerical results show that for the 4,40-dipyridyl with a p-conjugated phenyl-phosphoryl or diphenylsilyl side group,the pyridyl vertically anchors on the second atomic layer of the pyramid-shaped Au tip electrode at small inter-electrode distances by laterally pushing the apical Au atom aside,which induces stronger pyridyl-electrode coupling and high-conductance state of the formed junctions.As the inter-electrode distance increases,the pyridyl shifts to the apical Au atom of the tip electrode.This apical Au atom introduces additional scatterings to the tunneling electrons and significantly decreases the conductance of the junctions.Furthermore,for the 4,40-dipyridyl with a phenyl-phosphoryl side group,the probability of manifesting the high-conductance state is decreased due to the oxygen atom reducing the probability of the pyridyl adsorbing on the second layer of Au tip electrode.In contrast,for the 4,40-dipyridyl with a nonconjugated cyclohexyl-phosphoryl side group,the steric hindrance from the bulky cyclohexyl group leads the molecule to preferentially form the O-Au contact,which prevents both the high conductance and mechanically induced conductance switching of the junction.Our results provide a theoretical understanding of the side-group effects on electronic transport properties of single-molecule junctions,offering an alternative explanation for the experimental observations. 展开更多
关键词 single-molecule junction electron transport properties conductance switching side-group effects
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Single-molecule optoelectronic devices:exciton effect and spectroscopy characterization
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作者 Peng-Fei Gan Qi-Fan Yang +3 位作者 Rui-Qin Sun Chao-Chao Pan Shi-Yong Yu Zhi-Bing Tan 《Rare Metals》 2025年第10期6865-6896,共32页
The electronic structure of semiconductor materials governs the law of electron motion,which profoundly affects the properties such as conductivity and photoelectric conversion.Photo-responsive single-molecule junctio... The electronic structure of semiconductor materials governs the law of electron motion,which profoundly affects the properties such as conductivity and photoelectric conversion.Photo-responsive single-molecule junction technology provides insights into the electronic structure of photogenerated substances at the molecular scale,enabling the characterization of dynamic processes such as charge separation and energy transfer.These processes involve the unique quantum state known as the "exciton".The electrical characterization technique based on single molecule break junction facilities direct measurement of the photoelectric response of molecules at nanometer and subnanometer scale.This study reviews recent research progress of exciton effects and the characterization of optoelectronic phenomena.The mechanisms of exciton effects in three key optoelectronic phenomena—photoconductivity,photovoltaic s,and photoluminescence—are discussed.Furthermore,advanced spectral characterization techniques applied to the in-situ monitoring of single-molecule optoelectronic devices are highlighted.These include Raman spectroscopy with various enhancements,inelastic electron tunneling spectroscopy,and ultrafast spectroscopy with high resolution. 展开更多
关键词 single-molecule junction Exciton effect Photoclectric phenomenon Spectral characterization
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Solvent-induced conformation gating of single-molecule charge transport in valinomycin and valinomycin-K^(+ )junctions
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作者 Xia Long Xiao-Chi Liu +3 位作者 Yan-Yi Yang Jia-Qing Dai Jue-Xian Cao Yong Hu 《Rare Metals》 2025年第4期2522-2533,共12页
Gaining insights into charge transport related to conformational changes and ion transport in valinomycin(VM)is crucial for understanding the underlying physiological processes and advancing ion carrier applications.O... Gaining insights into charge transport related to conformational changes and ion transport in valinomycin(VM)is crucial for understanding the underlying physiological processes and advancing ion carrier applications.Observing these processes in single molecules provides deeper insights and precision than those obtained through conventional ensemble measurements.Herein,we employed a single-molecule conductance measurement method based on the scanning tunneling microscopy break-junction(STM-BJ)to measure the charge transport of individual VM molecules in both non-polar and polar solvents,as well as when mediated by K^(+)ions.Single-molecule conductance measurements revealed that the bracelet and propeller-type conformations of VM in both non-polar and polar solvents significantly affect its conductance.In polar solvents,the propeller-type conformation of VM demonstrated a well-defined conductance signature,single-molecule rectification feature,and through-space transmission mechanism.Specifically,the introduction of K^(+)ions in polar solvents induced a conformational transition from the propeller-type to the bracelet-type form,facilitating K^(+)binding recognition.These observations were further supported by density functional theory combined with non-equilibrium Green’s function calculations.This study enhanced the fundamental understanding of the electronic transport mechanisms in VM and valinomycin-K^(+)molecular junctions,offering insights into VM ionophores and promoting supramolecular sensing applications. 展开更多
关键词 VALINOMYCIN Conformational transition Ion carrier single-molecule charge transport Molecular electronics
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Single-molecule investigation of the impacts of fluorescent DNA-binding proteins on DNA mechanical properties
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作者 Yaxi Cheng Shang Gao +2 位作者 Xianqi Ye Chuang Tan Jie Ma 《Chinese Physics B》 2025年第8期457-463,共7页
DNA imaging and visualization techniques are crucial in biological experiments and have also emerged as a powerful method for single-molecule studies.Traditional intercalating dyes(e.g.,SYTOX,EtBr,GelRed)can stain DNA... DNA imaging and visualization techniques are crucial in biological experiments and have also emerged as a powerful method for single-molecule studies.Traditional intercalating dyes(e.g.,SYTOX,EtBr,GelRed)can stain DNA but may alter its structure and mechanical properties,and cause photocleavage.Recently,a novel fluorescent DNA-binding protein(FP-DBP)was introduced,which can stain DNA without sequence preference and without inducing photocleavage.In this study,using a custom-built magnetic tweezers system,we performed DNA stretching,twisting and unzipping experiments to compare the mechanical properties of DNA with and without two kinds of intercalating dyes(SYTOX Orange and GelRed)and mCherry FP-DBP.Our results show that mCherry FP-DBP does not affect DNA structure or mechanics,unlike SYTOX Orange and GelRed,making FP-DBP a promising tool for DNA visualization in single-molecule experiments. 展开更多
关键词 fluorescent DNA-binding protein single-molecule magnetic tweezers DNA mechanical properties intercalating dye
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Automatic clustering of single-molecule break junction data through task-oriented representation learning
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作者 Yi-Heng Zhao Shen-Wen Pang +4 位作者 Heng-Zhi Huang Shao-Wen Wu Shao-Hua Sun Zhen-Bing Liu Zhi-Chao Pan 《Rare Metals》 2025年第5期3244-3257,共14页
Clustering is a pivotal data analysis method for deciphering the charge transport properties of single molecules in break junction experiments.However,given the high dimensionality and variability of the data,feature ... Clustering is a pivotal data analysis method for deciphering the charge transport properties of single molecules in break junction experiments.However,given the high dimensionality and variability of the data,feature extraction remains a bottleneck in the development of efficient clustering methods.In this regard,extensive research over the past two decades has focused on feature engineering and dimensionality reduction in break junction conductance.However,extracting highly relevant features without expert knowledge remains an unresolved challenge.To address this issue,we propose a deep clustering method driven by task-oriented representation learning(CTRL)in which the clustering module serves as a guide for the representation learning(RepL)module.First,we determine an optimal autoencoder(AE)structure through a neural architecture search(NAS)to ensure efficient RepL;second,the RepL process is guided by a joint training strategy that combines AE reconstruction loss with the clustering objective.The results demonstrate that CTRL achieves excellent performance on both the generated and experimental data.Further inspection of the RepL step reveals that joint training robustly learns more compact features than the unconstrained AE or traditional dimensionality reduction methods,significantly reducing misclustering possibilities.Our method provides a general end-to-end automatic clustering solution for analyzing single-molecule break junction data. 展开更多
关键词 single-molecule conductance Break junction Deep clustering Representation learning Neural architecture search
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Tuning intramolecular dipole interactions in dinuclear single-molecule magnetic complexes of Er(Ⅲ)with monosubstituted cyclooctatetraenide ligands
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作者 Qiwei Chen Yousong Ding +2 位作者 Xiaofei Zhu Bingwu Wang Zhiping Zheng 《Journal of Rare Earths》 2025年第6期1213-1219,I0005,共8页
Manipulating magnetic couplings in molecular magnets is of great importance in improving the mag-netic properties of such materials.It has been proved that by adjusting the strength of magnetic cou-plings and the arra... Manipulating magnetic couplings in molecular magnets is of great importance in improving the mag-netic properties of such materials.It has been proved that by adjusting the strength of magnetic cou-plings and the arrangement of the intermolecular magnetic dipoles,magnetic blocking can be significantly enhanced.Herein manipulating the intramolecular dipole interactions by ligand modifica-tion was attempted with the use of three closely related dinuclear Er(Ⅲ)complexes of a common chemical formula of[(COT^(R))Er(μ-CI)(THF)]_(2)(COT^(R)is monosubstituted cyclooctatetraenide dianions with R=diphenylmethylsilyl(Ph_(2)MeS)for 1,triethylsilyl(TES)for 2,and triisopropylsilyl(TIPS)for 3).Each of these complexes features a centrosymmetric dinuclear core unit with their component Er(Ⅲ)ions doubly bridged by two chloro ligands and further coordinated with a capping substituted corR ligand and a coordinated THF molecule.Magnetic studies reveal that the complexes display similar ferromagnetic couplings with comparable single-molecule magnetic behaviors.The ferromagnetic couplings dominated by the intramolecular dipole interactions are found to be 0.7614,0.7380,and 0.5635 cm^(-1)for 1,2,and 3,respectively.The angles(θ)between the magnetic easy axes and the intramolecular Er-Er lines are 24.88(2)°,25.23(1),and 31.85(5),leading to transversal dipole fields of 0.0114,0.0113,and 0.0125 T for 1,2,and 3,respectively.Although the different ligand substitution generates a sizable difference of about 7 in theθangle,the resulting difference in the dipole interactions is not sufficiently strong to cause any significant differences in their magnetic properties.Further change in theθangles to the"side-by-side"(θ=90°)or"head-to-tail"(θ=0°)arrangement of the magnetic easy axes,achievable by rational mo-lecular design,is expected to lead to molecular magnetic materials with much enhanced properties. 展开更多
关键词 single-molecule magnet Dipole interaction Cyclooctatetraenide dianion Magnetic easy axe Ferromagnetic coupling RAREEARTHS
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Single-Molecule Detection by Silicon-based Photonic Integrated Circuits Chip
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作者 Dong Li Chengda Pan +7 位作者 Qiannan Huang Xiao Li Yan Zou Pengxiao Lv Xiujun Zheng Sarp Kerman Chunrui Hu Chang Chen 《Chinese Journal of Chemical Physics》 2025年第2期149-155,I0001,I0039,共9页
The single-molecule detection tech-nique plays a pivotal role in elucidat-ing the fundamental mechanisms of various scientific processes at the molecular level,and holds essential im-portance in multiple fields includ... The single-molecule detection tech-nique plays a pivotal role in elucidat-ing the fundamental mechanisms of various scientific processes at the molecular level,and holds essential im-portance in multiple fields including physics,biology,and chemistry.Re-cently,single-molecule detection has garnered increasing attention owing to its practical utility in medical diagno-sis,primarily due to its exceptional sensitivity and the minimal sample volume required for analysis.However,the conventional single-molecule technique,represented by total internal reflection microscopy,faces challenges such as sophisticated operation procedures and limited detection throughput,thereby impeding its broader application.To address these limitations,we have demonstrated single-molecule detection using an integrated silicon photonic chip,of-fering a cost-effective and user-friendly alternative.By employing basic optics,we efficiently introduce the excitation source for single-molecule fluorescence by harnessing the strong evanescent field of high refractive-index waveguides.Subsequently,fluorescence signals are collected using basic optics comprising a water-immersion objective,relay optics,and a digi-tal camera.Our results highlight a low-cost,high-throughput single-molecule technique achieved through the integrated silicon photonic chip.This innovative approach is promised to facilitate the widespread adoption of single-molecule fluorescence in medical diagnosis. 展开更多
关键词 single-molecule fluorescence Silicon photonics Photonic integrated circuit To-tal internal reflection fluorescence microscopy
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Improving single-molecule conductance by the quinoid structure of furan derivatives
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作者 Yi Xiong Zhu-Wen Wei +4 位作者 Jin-Shi Li Ping-Chuan Shen Ben-Zhong Tang Shi-Fa Zhu Zu-Jin Zhao 《Rare Metals》 2025年第6期4061-4073,共13页
Quinoid structures are considered to be conducive to the charge transport of organic molecules,but this hypothesis is rarely proven at single-molecule level.Herein,as a proof of concept,the single-molecule conductance... Quinoid structures are considered to be conducive to the charge transport of organic molecules,but this hypothesis is rarely proven at single-molecule level.Herein,as a proof of concept,the single-molecule conductance of two furan-based isomers,3,3'-bis(4-(methylthio)phenyl)-2,2'-bifuran(2,2'-SMPBF)and 4,4'-bis(4-(methylthio)phenyl)-3,3'-bifuran(3,3'-SMPBF),is investigated by the scanning tunneling microscopy break junction(STM-BJ)technique and theoretical simulation.2,2'-SMPBF prefers to adopt a nearly planar conformation with intact alternating single and double bonds extended via2,2'-bifuran moiety and therefore exhibits goodπ-conjugation and a prominent quinoid structure.However,theπ-conjugation of 3,3'-SMPBF is interrupted due to ineffective cross-conjugation in the 3,3'-bifuran moiety,leading to the absence of a quinoid structure.2,2'-SMPBF displays switchable multiple conductances induced by the interconversion between folded and unfolded conformations and an abnormal rebound of conductance along with the increases of electrode displacement,which is demonstrated to be caused by the quinoid structure in a nearly planar conformation during the stretching process.However,3,3'-SMPBF without a quinoid structure in unfolded conformation exhibits extremely low conductance that cannot be captured in STM-BJ measurements.These results reveal the significant contribution of quinoid structure to molecular charge transport and provide valuable information on the structure-transport relationship for the design of efficient organic semiconductors. 展开更多
关键词 single-molecule conductance Through-space conjugation Multichannel conductance Quinoid structure Scanning tunneling microscopy break junction
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Equatorial aminopyridine ligands stabilize an unusual straightly bridging mode in dimeric dysprosium(Ⅲ)single-molecule magnets
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作者 Qian-Cheng Luo Xia-Li Ding +2 位作者 Wen-Jie Xu Yuan-Qi Zhai Yan-Zhen Zheng 《Chinese Chemical Letters》 2025年第9期613-618,共6页
Due to the ionic feature of the lanthanide ions,to straightly bridge two lanthanide(Ln)ions is rather challenging though this bridging mode is much beneficial to suppress the zero-field quantum tunneling of the magnet... Due to the ionic feature of the lanthanide ions,to straightly bridge two lanthanide(Ln)ions is rather challenging though this bridging mode is much beneficial to suppress the zero-field quantum tunneling of the magnetization(QTM)for single-molecule magnets(SMMs),a kind of nanosized magnetic materials for high-density information storage and magnetic resonance imaging contrast agent.Here we used an unusual terminal amino pyridine ligand which utilizes extensive supramolecular interactions to stabilize such an unusual linear bridging mode and obtained a series of such dimeric Ln(Ⅲ)complexes-{[LnL_(A)(4-NH_(2)py)_(5)]_(2)(μ-Cl)}[BPh_(4)]_(3)(For L_(A)^(-)=1-AdO^(-),1Ln;for L_(A)^(-)=~tBuO^(-),2Ln;Ln=Dy,Gd).More uniquely,the bridging chloride sits in the center of two improper rotation symmetry related Ln(Ⅲ)ions with local C_(5v)symmetry.The dimeric compounds 1Dy and 2Dy exhibit much slower low-temperature magnetic relaxation and thousands of times longer relaxation times at 2 K(τ_(2K)=2706.89 and 1437.05 s for 1Dy and 2Dy)compared to the diluted ones with the approaching magnetic property of the C_(5v)motifs(τ_(2K)=0.77 and 1.29 s for 1Dy@1Y and 2Dy@2Y).Though magnetic interactions mediated via the chloride bridge in both 1Dy and 2Dy are weak and antiferromagnetic,it is still very effective due to such a linear geometry to reduce the QTM effect in SMMs. 展开更多
关键词 single-molecule magnets Lanthanide complexes Slow magnetic relaxation Magnetic coupling Quantum tunneling of the magnetization
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Single-molecule dynamic dissociation and polymerization-governed in situ repair and encapsulation for high-performance perovskite solar cells
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作者 Xianfei Cao Yong Qi +6 位作者 Wenshuai Zhao Zengyao Guo Tong Hu Zhengyang Gao Wenchao Han Lei Li Shufen Zhang 《Journal of Energy Chemistry》 2025年第10期923-930,共8页
Despite the ongoing increase in the efficiency of perovskite solar cells(PSCs),residual lead iodide(PbI2and moisture sensitivity issues continue to constrain their further commercialization.Herein,we propose a thermal... Despite the ongoing increase in the efficiency of perovskite solar cells(PSCs),residual lead iodide(PbI2and moisture sensitivity issues continue to constrain their further commercialization.Herein,we propose a thermally mediated in situ repair and encapsulation strategy to construct high-performance PSCs by incorporating piperazine thioctic acid salt(TAPPZ)as a dopant into the perovskite precursor Thermally dissociated piperazine(PPZ)from TAPPZ integrates microcrystals to form larger grain(>2000 nm),while the carboxylic acid in thioctic acid(TA)and the amine salt in TAPPZ synergistically passivate and transform PbI_(2),significantly reducing its residual amount.Additionally,TAPPZ undergoe thermal self-crosslinking during perovskite annealing,enabling melt-polymerization to form in situ encapsulation for enhanced water resistance.The TAPPZ-incorporated device achieves a remarkable efficiency of 25.65% and exhibits excellent operational stability,retaining over 90% of its initial efficiency after 2000 h under ambient conditions(20-30℃,20%-30% relative humidity).This study provide new insights into the construction of high-performance perovskite solar cells by designing and synthe sizing multifunctional single molecules for in situ repair and encapsulation of perovskites. 展开更多
关键词 Perovskite solar cells Multifunctional single-molecule Piperazine thioctic acid salt In situ repair In situ encapsulation
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A DNA Force Circuit for Exploring Protein-Protein Interactions at the Single-Molecule Level
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作者 Kangkang Ma Luoan Xiong +5 位作者 Zhuofei Wang Xin Hu Lihua Qu Xuetong Zhao Yao Li Zhongbo Yu 《Chinese Journal of Chemistry》 SCIE CAS CSCD 2024年第13期1456-1464,共9页
Protein-protein interactions(PPls)play a crucial role in drug discovery and disease treatment.However,the development of effective drugs targeting PPls remains challenging due to limited methodologies for probing thei... Protein-protein interactions(PPls)play a crucial role in drug discovery and disease treatment.However,the development of effective drugs targeting PPls remains challenging due to limited methodologies for probing their spatiotemporal anisotropy.Here,we propose a single-molecule approach using a unique force circuit to investigate Ppl dynamics and anisotropy under mechanical forces.Unlike conventional techniques,this approach enables the manipulation and real-time monitoring of individual proteins at specific amino acids with defined geometry,offering insights into molecular mechanisms at the single-molecule level.The DNA force circuit was constructed using click chemistry conjugation methods and genetic code expansion techniques,facilitating orthogonal conjugation between proteins and nucleic acids.The SET domain of the MLL1 protein and the tail of histone H3 were used as a model system to demonstrate the application of the DNA force circuit.With the use of atomic force microscopy and magnetic tweezers,optimized assembly procedures were developed.The DNA force circuit provides an exceptional platform for studying the anisotropy of PPis and holds promise for advancing drug discovery research targeted at PPIs. 展开更多
关键词 single-molecule studies Protein-protein interactions Click chemistry Genetic code expansion Molecular dynamics
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DNA-FRET Constructs Enable Multiplexed Fluorescence Detection at the Single-Molecule Level
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作者 Juan Wang Hanyang Yu 《Chemical & Biomedical Imaging》 2024年第9期592-594,共3页
Multiplexed fluorescence measurement at the singlemolecule level provides unique insight into the molecular composition and interaction within a complex system.1,2 However,fluorescence-based detection is typically res... Multiplexed fluorescence measurement at the singlemolecule level provides unique insight into the molecular composition and interaction within a complex system.1,2 However,fluorescence-based detection is typically restricted to 3-4 colors at a time,due to a low signal-to-noise ratio,high spectral overlap,and the need to maintain chemical compatibility of dyes.Although chemically diverse fluorophores offer a potentially broad spectroscopic palette,further multiplexing is ultimately constrained by the chemical compatibility and varying labeling performance of different fluorophores. 展开更多
关键词 chemical compatibility multiplexed fluorescence detection molecular composition single molecule level spectral overlap chemically diverse fluorophores DNA FRET signal noise ratio
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Monomeric type I and type III transforming growth factor-β receptors and their dimerization revealed by single-molecule imaging 被引量:10
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作者 Wei Zhang Jinghe Yuan +5 位作者 Yong Yang Li Xu Qiang Wang Wei Zuo Xiaohong Fang Ye-Guang Chen 《Cell Research》 SCIE CAS CSCD 2010年第11期1216-1223,共8页
Transforming growth factor-β (TGF-β) binds with two transmembrane serine/threonine kinase receptors, type Ⅱ (TβRII) and type Ⅰ receptors (TβRⅠ), and one accessory receptor, type Ⅲ receptor (TβRⅢ), to... Transforming growth factor-β (TGF-β) binds with two transmembrane serine/threonine kinase receptors, type Ⅱ (TβRII) and type Ⅰ receptors (TβRⅠ), and one accessory receptor, type Ⅲ receptor (TβRⅢ), to transduce signals across cell membranes. Previous biochemical studies suggested that TβRI and TβRIII are preexisted homo-dimers. Using single-molecule microscopy to image green fluorescent protein-labeled membrane proteins, for the first time we have demonstrated that TβRI and TβRⅢ could exist as monomers at a low expression level. Upon TGF-β1 stimu- lation, TβRI follows the general ligand-induced receptor dimerization model for activation, but this process is TβRⅡ- dependent. The monomeric status of the non-kinase receptor TβRⅢ is unchanged in the presence of TGF-β1. With the increase of receptor expression, both TβRI and TβRIII can be assembled into dimers on cell surfaces. 展开更多
关键词 single-molecule fluorescence TGF-β signaling Type I TGF-β receptor Type TGF-β receptor subunit stoi-chiometry
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Single-molecule optoelectronic devices:physical mechanism and beyond 被引量:4
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作者 Peihui Li Yijian Chen +4 位作者 Boyu Wang Mengmeng Li Dong Xiang Chuancheng Jia Xuefeng Guo 《Opto-Electronic Advances》 SCIE EI 2022年第5期1-21,共21页
Single-molecule devices not only promise to provide an alternative strategy to break through the miniaturization and functionalization bottlenecks faced by traditional semiconductor devices,but also provide a reliable... Single-molecule devices not only promise to provide an alternative strategy to break through the miniaturization and functionalization bottlenecks faced by traditional semiconductor devices,but also provide a reliable platform for exploration of the intrinsic properties of matters at the single-molecule level.Because the regulation of the electrical properties of single-molecule devices will be a key factor in enabling further advances in the development of molecular electronics,it is necessary to clarify the interactions between the charge transport occurring in the device and the external fields,particularly the optical field.This review mainly introduces the optoelectronic effects that are involved in single-molecule devices,including photoisomerization switching,photoconductance,plasmon-induced excitation,photovoltaic effect,and electroluminescence.We also summarize the optoelectronic mechanisms of single-molecule devices,with particular emphasis on the photoisomerization,photoexcitation,and photo-assisted tunneling processes.Finally,we focus the discussion on the opportunities and challenges arising in the single-molecule optoelectronics field and propose further possible breakthroughs. 展开更多
关键词 optoelectronic device single-molecule junction light-matter interaction SWITCH ELECTROLUMINESCENCE PLASMON
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A series of heterometallic 3d-4f polyoxometalates as single-molecule magnets 被引量:2
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作者 Shurong Li Zhenzhang Weng +5 位作者 Linpeng Jiang Rongjia Wei Haifeng Su Lasheng Long Lansun Zheng Xiangjian Kong 《Chinese Chemical Letters》 SCIE CAS CSCD 2023年第3期438-441,共4页
Three sandwich-like[Ln_(2)Fe_(2)(B-α-FeW_9O_(34))_(2)]^(10-) clusters(Ln_(2)Fe_(4),Ln=Dy(1),Ho(2),and Y(3)) were obtained by reacting Na_9[B-α-SbW_9O_(33)],Ln_(2)O_(3),FeCl_(3)·6H_(2)O and KH_(2)PO_(4).The[B-α... Three sandwich-like[Ln_(2)Fe_(2)(B-α-FeW_9O_(34))_(2)]^(10-) clusters(Ln_(2)Fe_(4),Ln=Dy(1),Ho(2),and Y(3)) were obtained by reacting Na_9[B-α-SbW_9O_(33)],Ln_(2)O_(3),FeCl_(3)·6H_(2)O and KH_(2)PO_(4).The[B-α-FeW_9O_(34)]^(11-) units were formed via the in situ conversion of lacunary polyoxometalates(POM)[B-α-SbW_9O_(33)]^(9-)and the Ln^(3+)ions were generated from the slow dissolution of Ln_(2)O_(3),both of which play important roles in the synthesis of Ln_(2)Fe_(4).Ln_(2)Fe_(4) is the first 3d-4f cluster assembled from d-metal heteroatom-containing POM.The Dy_(2)Fe_(4) cluster exhibits single-molecule magnet properties with an 80 K energy barrier in an optimal DC field.Cyclic voltammetry tests and controlled-potential coulometry experiments show that the polyoxometalate Fe heteroatom in clusters 1-3 is also electrochemically active. 展开更多
关键词 POLYOXOMETALATES 3d-4f CLUSTER LANTHANIDE single-molecule magnet
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The N^6-adenine methylation in yeast genome profiled by single-molecule technology 被引量:3
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作者 Zhe Liang Guoliang Yu +5 位作者 Jingrong Liu Yuke Geng Jinghui Mao Depeng Wang Jiapeng Zhou Xiaofeng Gu 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2018年第4期223-225,共3页
The most common and abundant DNA modification is 5-methylcytosine(5mC),which has been well-established as an epigenetic mark regulating gene expression in eukaryotes(Jones,2012).Another DNA modification N^6-methyl... The most common and abundant DNA modification is 5-methylcytosine(5mC),which has been well-established as an epigenetic mark regulating gene expression in eukaryotes(Jones,2012).Another DNA modification N^6-methyldeoxyadenosine(6mA),previously reported as a widespread DNA methylation in prokaryotes. 展开更多
关键词 DNA TSS The N~6-adenine methylation in yeast genome profiled by single-molecule technology
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Simultaneous, hybrid single-molecule method by optical tweezers and fluorescence 被引量:1
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作者 Guoteng Ma Chunguang Hu +3 位作者 Shuai Li Xiaoqin Gao Hongbin Li Xiaotang Hu 《Nanotechnology and Precision Engineering》 EI CAS CSCD 2019年第4期145-156,共12页
As studies on life sciences progress toward the single-molecule level,new experiments have put forward more requirements for simultaneously displaying the mechanical properties and conformational changes of biomolecul... As studies on life sciences progress toward the single-molecule level,new experiments have put forward more requirements for simultaneously displaying the mechanical properties and conformational changes of biomolecules.Optical tweezers and fluorescence microscopy have been combined to solve this problem.The combination of instruments forms a new generation of hybrid single-molecule technology that breaks through the limitations of traditional biochemical analysis.Powerfulmanipulation and fluorescence visualization have beenwidely used,and these techniques provide new possibilities for studying complex biochemical reactions at the singlemolecule level.This paper explains the features of this combined technique,including the application characteristics of single-trap and dual-traps,the anti-bleaching method,and optical tweezers combined with epifluorescence,confocal fluorescence,total internal reflection fluorescence,and other fluorescence methods.Using typical experiments,we analyze technical solutions and explain the factors and principles that instrument designers should consider.This review aims to give an introduction to this novel fusion technology process and describe important biological results. 展开更多
关键词 single-molecule Optical tweezers Confocal fluorescence FRET TIRF
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