Quantitative analysis of clinical function parameters from MRI images is crucial for diagnosing and assessing cardiovascular disease.However,the manual calculation of these parameters is challenging due to the high va...Quantitative analysis of clinical function parameters from MRI images is crucial for diagnosing and assessing cardiovascular disease.However,the manual calculation of these parameters is challenging due to the high variability among patients and the time-consuming nature of the process.In this study,the authors introduce a framework named MultiJSQ,comprising the feature presentation network(FRN)and the indicator prediction network(IEN),which is designed for simultaneous joint segmentation and quantification.The FRN is tailored for representing global image features,facilitating the direct acquisition of left ventricle(LV)contour images through pixel classification.Additionally,the IEN incorporates specifically designed modules to extract relevant clinical indices.The authors’method considers the interdependence of different tasks,demonstrating the validity of these relationships and yielding favourable results.Through extensive experiments on cardiac MR images from 145 patients,MultiJSQ achieves impressive outcomes,with low mean absolute errors of 124 mm^(2),1.72 mm,and 1.21 mm for areas,dimensions,and regional wall thicknesses,respectively,along with a Dice metric score of 0.908.The experimental findings underscore the excellent performance of our framework in LV segmentation and quantification,highlighting its promising clinical application prospects.展开更多
The appearanee of blood vessels is an important biomarker to distinguish diseased from healthy tissues in several fields of medical applications. Photoacoustie microangiography has the advantage of directly visualizin...The appearanee of blood vessels is an important biomarker to distinguish diseased from healthy tissues in several fields of medical applications. Photoacoustie microangiography has the advantage of directly visualizing blood vessel networks within mierocireulatory tissue. Usually these images are interpreted qualitatively. However, a quantitative analysis is needed to better describe the characteristics of the blood vessels. This Letter addresses this problem by leveraging an efficient multiscale Hessian filter-based segmentation method, and four measure- ment parameters are acquired. The feasibility of our approach is demonstrated on experimental data and we expect the proposed method to be beneficial for several microcireulatory disease studies.展开更多
An accurate segmentation and quantification of the superficial foveal avascular zone(sFAZ)is important to facilitate the diagnosis and treatment of many retinal diseases,such as diabetic retinopathy and retinal vein o...An accurate segmentation and quantification of the superficial foveal avascular zone(sFAZ)is important to facilitate the diagnosis and treatment of many retinal diseases,such as diabetic retinopathy and retinal vein occlusion.We proposed a method based on deep learning for the automatic segmentation and quantification of the sFAZ in optical coherence tomography angiography(OCTA)images with robustness to brightness and contrast(B/C)variations.A dataset of 405 OCTA images from 45 participants was acquired with Zeiss Cirrus HD-OCT 5000 and the ground truth(GT)was manually segmented subsequently.A deep learning network with an encoder–decoder architecture was created to classify each pixel into an sFAZ or non-sFAZ class.Subsequently,we applied largestconnected-region extraction and hole-filling to fine-tune the automatic segmentation results.A maximum mean dice similarity coefficient(DSC)of 0.976±0.011 was obtained when the automatic segmentation results were compared against the GT.The correlation coefficient between the area calculated from the automatic segmentation results and that calculated from the GT was 0.997.In all nine parameter groups with various brightness/contrast,all the DSCs of the proposed method were higher than 0.96.The proposed method achieved better performance in the sFAZ segmentation and quantification compared to two previously reported methods.In conclusion,we proposed and successfully verified an automatic sFAZ segmentation and quantification method based on deep learning with robustness to B/C variations.For clinical applications,this is an important progress in creating an automated segmentation and quantification applicable to clinical analysis.展开更多
基金Hefei Municipal Natural Science Foundation,Grant/Award Number:2022009Suqian Guiding Program Project,Grant/Award Number:Z202309Suqian Traditional Chinese Medicine Science and Technology Plan,Grant/Award Number:MS202301。
文摘Quantitative analysis of clinical function parameters from MRI images is crucial for diagnosing and assessing cardiovascular disease.However,the manual calculation of these parameters is challenging due to the high variability among patients and the time-consuming nature of the process.In this study,the authors introduce a framework named MultiJSQ,comprising the feature presentation network(FRN)and the indicator prediction network(IEN),which is designed for simultaneous joint segmentation and quantification.The FRN is tailored for representing global image features,facilitating the direct acquisition of left ventricle(LV)contour images through pixel classification.Additionally,the IEN incorporates specifically designed modules to extract relevant clinical indices.The authors’method considers the interdependence of different tasks,demonstrating the validity of these relationships and yielding favourable results.Through extensive experiments on cardiac MR images from 145 patients,MultiJSQ achieves impressive outcomes,with low mean absolute errors of 124 mm^(2),1.72 mm,and 1.21 mm for areas,dimensions,and regional wall thicknesses,respectively,along with a Dice metric score of 0.908.The experimental findings underscore the excellent performance of our framework in LV segmentation and quantification,highlighting its promising clinical application prospects.
基金supported by the National Natural Science Foundation of China(Nos.61201307,61371045,and 61171197)the Fundamental Research Funds for the Central Universities(No.HIT.NSRIF.2013132)
文摘The appearanee of blood vessels is an important biomarker to distinguish diseased from healthy tissues in several fields of medical applications. Photoacoustie microangiography has the advantage of directly visualizing blood vessel networks within mierocireulatory tissue. Usually these images are interpreted qualitatively. However, a quantitative analysis is needed to better describe the characteristics of the blood vessels. This Letter addresses this problem by leveraging an efficient multiscale Hessian filter-based segmentation method, and four measure- ment parameters are acquired. The feasibility of our approach is demonstrated on experimental data and we expect the proposed method to be beneficial for several microcireulatory disease studies.
文摘An accurate segmentation and quantification of the superficial foveal avascular zone(sFAZ)is important to facilitate the diagnosis and treatment of many retinal diseases,such as diabetic retinopathy and retinal vein occlusion.We proposed a method based on deep learning for the automatic segmentation and quantification of the sFAZ in optical coherence tomography angiography(OCTA)images with robustness to brightness and contrast(B/C)variations.A dataset of 405 OCTA images from 45 participants was acquired with Zeiss Cirrus HD-OCT 5000 and the ground truth(GT)was manually segmented subsequently.A deep learning network with an encoder–decoder architecture was created to classify each pixel into an sFAZ or non-sFAZ class.Subsequently,we applied largestconnected-region extraction and hole-filling to fine-tune the automatic segmentation results.A maximum mean dice similarity coefficient(DSC)of 0.976±0.011 was obtained when the automatic segmentation results were compared against the GT.The correlation coefficient between the area calculated from the automatic segmentation results and that calculated from the GT was 0.997.In all nine parameter groups with various brightness/contrast,all the DSCs of the proposed method were higher than 0.96.The proposed method achieved better performance in the sFAZ segmentation and quantification compared to two previously reported methods.In conclusion,we proposed and successfully verified an automatic sFAZ segmentation and quantification method based on deep learning with robustness to B/C variations.For clinical applications,this is an important progress in creating an automated segmentation and quantification applicable to clinical analysis.
