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Enhanced risk assessment framework integrating distribution dynamics,genetically inferred populations,and morphological traits of Diploderma lizards 被引量:1
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作者 Qi Xiao Xiu-Dong Shi +5 位作者 Lin Shi Zhong-Yi Yao You-Hua Chen Wei-Zhao Yang Zi-Yan Liao Yin Qi 《Zoological Research》 2025年第1期15-26,共12页
Assessing the threat status of species in response to global change is critical for biodiversity monitoring and conservation efforts.However,current frameworks,even the IUCN Red List,often neglect critical factors suc... Assessing the threat status of species in response to global change is critical for biodiversity monitoring and conservation efforts.However,current frameworks,even the IUCN Red List,often neglect critical factors such as genetic diversity and the impacts of climate and land-use changes,hindering effective conservation planning.To address these limitations,we developed an enhanced extinction risk assessment framework using Diploderma lizards as a model.This framework incorporates long-term field surveys,environmental data,and land-use information to predict distributional changes for 10 recently described Diploderma species on the Qinghai-Xizang Plateau,which hold ecological significance but remain underassessed in conservation assessment.By integrating the distribution data and genetically inferred effective population sizes(Ne),we conducted scenario analyses and used a rank-sum approach to calculate Risk ranking scores(RRS)for each species.This approach revealed significant discrepancies with the IUCN Red List assessments.Notably,D.yangi and D.qilin were identified as facing the highest extinction risk.Furthermore,D.vela,D.batangense,D.flaviceps,D.dymondi,D.yulongense,and D.laeviventre,currently classified as“Least Concern”,were found to warrant reclassification as“Vulnerable”due to considerable threat from projected range contractions.Exploring the relationship between morphology and RRS revealed that traits such as snout-vent length and relative tail length could serve as potential predictors of extinction risk,offering preliminary metrics for assessing species vulnerability when comprehensive data are unavailable.This study enhances the precision of extinction risk assessment frameworks and demonstrates their capacity to refine and update risk assessments,especially for lesser-known taxa. 展开更多
关键词 LIZARD Extinction Risk Assessment IUCN Red List Conservation Status Effective population Size Morphological Traits
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Status of the Xinjiang Ground Jay:population,breeding ecology and conservation 被引量:1
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作者 马鸣 《Chinese Birds》 2011年第1期59-62,共4页
The Xinjiang Ground Jay (Podoces biddulphi) is a bird species endemic to China. It has a restricted range, living only in the Taklimakan Desert, southern part of Xinjiang. So far, little information has been known of ... The Xinjiang Ground Jay (Podoces biddulphi) is a bird species endemic to China. It has a restricted range, living only in the Taklimakan Desert, southern part of Xinjiang. So far, little information has been known of the status and ecology of the bird in the world. Since 1988, I have been taking field investigations on the distribution, population size and breeding ecology of the Xinjiang Ground Jay in the desert.In this thesis, the desertification in relation to the eastward expansion of the ground jays was discussed. 展开更多
关键词 Xinjiang Ground Jay breeding ecology population size CONSERVATION Taklimakan Desert
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Effects of effective population size on the F_2 growth and survival of bay scallop Argopecten irradians irradians (Lamarck) 被引量:8
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作者 ZHANG Haibin LIU Xiao +1 位作者 ZHANG Guofan ZHANG Guizhen 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2005年第4期114-120,共7页
In 2002, six cohorts ofbroodstock bay scallop Argopecten irradians irradians (Ne=1, 2, 10, 30, 50 and control) were randomly chosen from a population of bay scallop to produce offspring. After one year rearing, with... In 2002, six cohorts ofbroodstock bay scallop Argopecten irradians irradians (Ne=1, 2, 10, 30, 50 and control) were randomly chosen from a population of bay scallop to produce offspring. After one year rearing, with the progeny matured, the similar experiment was done to produce the F2 generation. To determine the magnitude of Ne effects, the growth and survival rates in larvae and adult of six F2 groups were compared. Results showed that inbreeding depression existed not only in the Ne=1 group but also in the Ne=2 group. The growth and survival rates of the two groups were significantly lower than those of the other groups (Ne=10, 30, 50, control), and there were no significant differences among the latter (P〉0.05). At the same time, the amount of depression in the Ne=1 group was significantly higher than that of the Ne=2 group (P〈0.05). These results indicated that the low effective population size (Ne), which increases the possibility of inbreeding, could lead to some harmful effects on the offspring. So it is essential to maintain a high level of Ne in commercial seed production. Fta'thermore, as the high fecundity of bay scallop might lead to increased inbreeding, selecting broodstock from different growout sites is recommended. 展开更多
关键词 Argopecten irradians irradians effective population size inbreeding depression GROWTH SURVIVAL
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SEIR Model of Rumor Spreading in Online Social Network with Varying Total Population Size 被引量:7
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作者 董苏雅拉图 邓燕斌 黄永畅 《Communications in Theoretical Physics》 SCIE CAS CSCD 2017年第10期545-552,共8页
Based on the infectious disease model with disease latency, this paper proposes a new model for the rumor spreading process in online social network. In this paper what we establish an SEIR rumor spreading model to de... Based on the infectious disease model with disease latency, this paper proposes a new model for the rumor spreading process in online social network. In this paper what we establish an SEIR rumor spreading model to describe the online social network with varying total number of users and user deactivation rate. We calculate the exact equilibrium points and reproduction number for this model. Furthermore, we perform the rumor spreading process in the online social network with increasing population size based on the original real world Facebook network. The simulation results indicate that the SEIR model of rumor spreading in online social network with changing total number of users can accurately reveal the inherent characteristics of rumor spreading process in online social network. 展开更多
关键词 online social network rumor spreading model equilibrium point varying population size
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Patterns of change in the population and spatial distribution of oriental white storks (Ciconia boyciana) wintering in Poyang Lake 被引量:6
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作者 Zhen-Hua WEI Yan-Kuo LI +3 位作者 Peng XU Fa-Wen QIAN Ji-Hong SHAN Xiao-Bin TU 《Zoological Research》 CAS CSCD 2016年第6期338-346,共9页
Using total counts in simultaneous annual surveys, we monitored the population size and spatial distribution of oriental white storks (Ciconia boyciana) wintering in Poyang Lake between 1998 and 2011. Results showed... Using total counts in simultaneous annual surveys, we monitored the population size and spatial distribution of oriental white storks (Ciconia boyciana) wintering in Poyang Lake between 1998 and 2011. Results showed that Poyang Lake wetland is an important wintering ground for oriental white storks, with an annual average population number of 2 305+326. The population sizes in 2004, 2005, 2010, and 2011 were higher than the highest-ever estimate of its global population. In 2005, we recorded 3 789 individuals, which was the maximum population number within the period of 1998-2011. The storks inhabited 52 lakes, with the greatest distance between these lakes being 180.3 km. The storks presented a clustered distribution pattern in the Poyang Lake wetland, irrespective of the number of individuals or occurrence frequencies. Shahu, Dahuchi, Banghu, and Hanchihu were most frequently used lakes and had the largest annual average numbers of storks. There was a significant positive correlation between occurrence frequency and annual average number of storks in the lakes. Most of the lakes important for storks were covered by existing nature reserves, though some lakes outside the reserves were also frequently used. About 64.9%+ 5.5% of the storks were found in nature reserves. In addition, the storks more frequently used and clumped in significantly larger flocks in lakes within nature reserves than lakes outside. 展开更多
关键词 Oriental white stork Poyang Lake population size Spatial distribution
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Genetic diversity analysis of spawner and recaptured populations of Chinese shrimp(Fenneropenaeus chinensis)during stock enhancement in the Bohai Bay based on an SSR marker 被引量:13
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作者 WANG Mosang WANG Weiji +5 位作者 XIAO Guangxia LIU Kefeng HU Yulong TIAN Tao KONG Jie JIN Xianshi 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2016年第8期51-56,共6页
Eight microsatellite markers were used to analyze genetic diversity, level of inbreeding, and effective population size of spawner and recaptured populations of Chinese shrimp(Fenneropenaeus chinensis) during stock ... Eight microsatellite markers were used to analyze genetic diversity, level of inbreeding, and effective population size of spawner and recaptured populations of Chinese shrimp(Fenneropenaeus chinensis) during stock enhancement in the Bohai Bay in 2013. A total of 254 and 238 alleles were identified in the spawner and recaptured populations, respectively, and the numbers of alleles(N_a) were 8–63 and 6–60, respectively. The numbers of effective alleles(N_e) were 2.52–21.60 and 2.67–20.72, respectively. The polymorphism information content ranged from 0.529 to 0.952. The observed heterozygosity(H_o) values(0.638–0.910 and 0.712–0.927) were lower than the expected heterozygosity(H_e) values(0.603–0.954 and 0.625–0.952), which indicated that the two populations possessed a rich genetic diversity. In 16 tests(2 populations×8 loci), 13 tests deviated from the HardyWeinberg equilibrium. F_(is) values were positive at seven loci and the inbreeding coefficients(F) of the two populations estimated by trio ML were 13.234% and 11.603%, suggesting that there was a relatively high degree of inbreeding. A certain level of inbreeding depression had occurred in the Chinese shrimp population. F_(st) values ranged from 0 to 0.059, with a mean of 0.028, displaying a low level of genetic differentiation in the two populations. Effective population sizes(3 060.2 and 3 842.8) were higher than the minimum number suggested for retaining the evolutionary potential to adapt to new environmental conditions. For enhancement activity in 2014,the ideal number of captured shrimp spawners should have ranged from 7 686 to 19 214 to maintain genetic diversity and effective population size. Further strategies to adjust the balance of economic cost, fishing effort and ideal number of shrimp spawners to maintain a satisfactory effective population size for ensuring the sustainability of Chinese shrimp are proposed. 展开更多
关键词 Fenneropenaeus chinensis SSR genetic diversity inbreeding effective population size
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Resurvey After 20 Years:Updating the Distribution,Population,and Potential Threats of the Chinting Alpine Toad 被引量:2
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作者 Yuezheng FAN Qingfeng CHEN +7 位作者 Yuwen CHENG Kaicheng TANG Ling SUN Yonghao HUANG Lan ZHAO Dong LIANG Xiaoyi WANG Junhua HU 《Asian Herpetological Research》 SCIE CSCD 2024年第2期73-81,共9页
Considering the increased anthropogenic impacts,species with a limited range and low detectability often lack fundamental information and conservation actions,placing them at a high risk of endangerment.The Chinting a... Considering the increased anthropogenic impacts,species with a limited range and low detectability often lack fundamental information and conservation actions,placing them at a high risk of endangerment.The Chinting alpine toad Scutiger chintingensis is a rare mountain amphibian endemic to the eastern margin of the Qinghai-Xizang Plateau in China.Within its whole distribution range,only three known populations(Wolong,Emei,and Wawu)exist and no recent population status report has been documented for this species over the past two decades.From 2020 to 2023,we investigated the species distribution,and assessed the risk factors for the main populations.We recorded this species in all distribution areas,and updated a new distribution site with a lower elevation limit.The relative population density was 0.024±0.012 ind./m^(2)on Mount Emei,whereas only 0.008±0.017 ind./m^(2)on Mount Wawu.No significant difference was observed in the number of individuals between the two populations;however,the relative population density was significantly different.Sewage and waste discharge resulting from the construction of scenic areas,as well as disturbances from tourism,were the primary anthropogenic factors that influenced the survival of this species.Our results provide the updated information on the distribution and population status of the Chinting alpine toad,and suggest that unrecorded populations,as well as a wider elevation range,may exist for this species.Our findings emphasise the importance of timely updates of species distribution and population information and offer a basis for the future conservation of endangered amphibians. 展开更多
关键词 DISTRIBUTION endemic amphibian population size Scutiger chintingensis threat factor
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Individual variability in life-history traits drives population size stability 被引量:1
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作者 Ned A. DOCHTERMANN C. M. GIENGER 《Current Zoology》 SCIE CAS CSCD 2012年第2期358-362,共5页
Understanding how population sizes vary over time is a key aspect of ecological research. Unfortunately, our under- standing of population dynamics has historically been based on an assumption that individuals are ide... Understanding how population sizes vary over time is a key aspect of ecological research. Unfortunately, our under- standing of population dynamics has historically been based on an assumption that individuals are identical with homogenous life-history properties. This assumption is certainly false for most natural systems, raising the question of what role individual variation plays in the dynamics of populations. While there has been an increase of interest regarding the effects of within popula- tion variation on the dynamics of single populations, there has been little study of the effects of differences in within population variation on patterns observed across populations. We found that life-history differences (clutch size) among individuals ex- plained the majority of the variation observed in the degree to which population sizes of eastern fence lizards Sceloporus undula- tus fluctuated. This finding suggests that differences across populations cannot be understood without an examination of differences at the level of a system rather than at the level of the individual 展开更多
关键词 Individual variation population size variability Ecological stability Demographic stochasticity Demographic heterogeneity Sceloporus undulatus
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An instantaneous coalescent method insensitive to population structure 被引量:1
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作者 Zeqi Yao Kehui Liu +1 位作者 Shanjun Deng Xionglei He 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2021年第3期219-224,共6页
Conventional coalescent inferences of population history make the critical assumption that the population under examination is panmictic.However,most populations are structured.This complicates the prevailing coalesce... Conventional coalescent inferences of population history make the critical assumption that the population under examination is panmictic.However,most populations are structured.This complicates the prevailing coalescent analyses and sometimes leads to inaccurate estimates.To develop a coalescent method unhampered by population structure,we perform two analyses.First,we demonstrate that the coalescent probability of two randomly sampled alleles from the immediate preceding generation(one generation back)is independent of population structure.Second,motivated by this finding,we propose a new coalescent method:i-coalescent analysis.The i-coalescent analysis computes the instantaneous coalescent rate by using a phylogenetic tree of sampled alleles.Using simulated data,we broadly demonstrate the capability of i-coalescent analysis to accurately reconstruct population size dynamics of highly structured populations,although we find this method often requires larger sample sizes for structured populations than for panmictic populations.Overall,our results indicate i-coalescent analysis to be a useful tool,especially for the inference of population histories with intractable structure such as the developmental history of cell populations in the organs of complex organisms. 展开更多
关键词 COALESCENT population structure Demographic history population size Phylogenetic tree
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Evolution of the North Atlantic Current and Barents Ice Sheet as revealed by grain size populations in the northern Norwegian Sea during the last 60 ka 被引量:1
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作者 Weiguo Wang Mengwei Zhao +3 位作者 Yanguang Liu Min Jiang Chengqiang Wu Yang Liu 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2021年第10期106-117,共12页
The grain size distribution of bulk sediment samples was decomposed in a core to reconstruct paleoceanographic evolution over the past 60 ka in the northern Norwegian Sea.The results show that sediments consisted of 3... The grain size distribution of bulk sediment samples was decomposed in a core to reconstruct paleoceanographic evolution over the past 60 ka in the northern Norwegian Sea.The results show that sediments consisted of 3–4 grain populations derived from the North Atlantic Current(NAC)and Barents Ice Sheet(BIS).The grain size data suggest three palaeoceanographic evolution stages:(1)an environment affected by BIS and NAC and changed with the interstadial/stadial transition in phase with the Greenland ice-core record at 60–31 ka BP,during which discharge of icebergs and the content of the coarsest population containing ice-rafted debris(IRD)in the sediments increased significantly during stadial,while the fine silt population containing volcanic glasses increased with the enhancement of NAC during the interstadial;(2)an extreme environment controlled by BIS at31–13 ka BP.BIS reached to its maximum at about 31 ka BP and the turbid plumes that formed at the leading edge of BIS contributed to a significant increase in the clayey population in sediments.Icebergs drained into the northern Norwegian Sea with periodical calving of the BIS at 31–19 ka BP.Subsequently,the ablation of the BIS discharged massive floods with clayey sediments and icebergs into the Norwegian Sea at 19–13 ka BP,resulting in a constant increase in clay and IRD in sediments;and(3)a marine environment similar to the present one under the strong influence of NAC following the complete melting of the BIS after 13 ka BP,NAC is the dominant transport agent and no IRD occurred in sediments.The fine silt populations containing volcanic glasses transported by NAC significantly increased. 展开更多
关键词 Norwegian Sea SEDIMENTS grain size population North Atlantic Current Barents Ice Sheet PALEOCEANOGRAPHY last glacial
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African Lion Population Estimates in Tanzania’s Ruaha National Park 被引量:1
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作者 Michael H. Kimaro Hillary T. Mrosso +12 位作者 Simon J. Chidodo Nyemo A. Chilagane Fenrick F. Msigwa George B. Bulenga Rose P. Kicheleri Charles P. Mgeni Rajabu J. Kangile Elisante A. Kimambo Courtney Hughes Camille Warbington Helen Mchaki Daniel Mathayo Halima R. Kiwango 《Open Journal of Ecology》 2022年第8期558-569,共12页
Tanzania is considered a country with the largest number of African lions (Panthera leo). However, the continued absence of ecological population estimates and understanding of the associated factors influencing lion ... Tanzania is considered a country with the largest number of African lions (Panthera leo). However, the continued absence of ecological population estimates and understanding of the associated factors influencing lion distribution hinders the development of conservation planning. This is particularly true in the Ruaha-Rungwa landscape, where it was estimated that more than 10% of the global lion population currently resides. By using a call-back survey method, we aimed to provide population estimates (population size and density) of African lions in the Ruaha National Park, between wet (March 2019) and dry (October 2019) seasons. We also assessed the key factors that influenced the distribution of the observed lions towards call-back stations. Ferreira & Funston’s (2010) formula was used to calculate population size and in turn used to estimate density in the sampled area, while the Generalized Linear Model (GLMM) with zero-inflated Poisson error distribution was used to determine factors that influence the distribution of the observed lions to call-back stations. The population size we calculated for the sampled area of 3137.2 km<sup>2 </sup>revealed 286 lions (95% CI, 236 - 335) during the wet season, and 196 lions (95% CI, 192 - 200) during the dry season. The density of lions was 9.1/100 km<sup>2 </sup>during the wet season, and 6.3/100 km<sup>2</sup> during the dry season. Distance to water source had a significant negative effect on the distribution of the observed lions to the call-back stations, while habitat had a marginal effect. Our findings show that, although lion population estimates were larger during the wet season than the dry season, the season had no effect on the distribution of the observed lions to call-back stations. We suggest that the proximity to water sources is important in study design. Further, we suggest that density and population size are useful indices in identifying conservation area priorities and lion coexistence strategies. 展开更多
关键词 population Size Density Estimate Call-Back Survey African Lion CONSERVATION
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Comparative Study on Population Ageing Between China and Other Asian Countries 被引量:1
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作者 Hui Yang Peng Du 《Sociology Study》 2011年第2期96-100,共5页
Compared with developed countries, the main characteristics of population ageing in China have been regarded as a rapid ageing society. However, China and other Asian countries have been experiencing the demographic t... Compared with developed countries, the main characteristics of population ageing in China have been regarded as a rapid ageing society. However, China and other Asian countries have been experiencing the demographic transition simultaneously, it is better to understand the characteristics of population ageing in China when compared with other Asian countries. Using the latest UN data, this paper compares the percentage of elderly population, the speed of ageing and the size of aged population among China and other Asian countries. The result indicates that China has a relatively high percentage of aged population, relatively rapid ageing population and will keep the largest size of aged population of the world in the next 60 years. 展开更多
关键词 population ageing speed of ageing size of aged population
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Assessment of parental contribution and effective population size from a 3×3 diallel cross of clam Meretrix meretrix
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作者 代平 王鸿霞 刘保忠 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2014年第2期306-315,共10页
Unbalanced parental contribution and small effective population size (Ne) are common issues during the artificial breeding of marine bivalves. The impact of hatchery-spawning practices on parental contribution, effe... Unbalanced parental contribution and small effective population size (Ne) are common issues during the artificial breeding of marine bivalves. The impact of hatchery-spawning practices on parental contribution, effective population size, the Ne/Nratio, and genetic diversity are largely unknown. To address this, we conducted a parentage analysis on a complete 3×3 diallel cross of clam Meretrix meretrix using eight microsatellite markers. The genetic diversity of the parents was higher than that of their respective offspring in most crosses (8/9). Sires or dams from the same family contributed unequally to the pool of offspring from a particular cross, and the same parent clam exhibited large variation in parental contribution among different crosses. The variance in male contribution was higher than that of the female contribution in most crosses, suggesting that male contribution was more skewed than for females. The No/N ratio for nine crosses ranged from 0.58 to 0.86. There was no linear relationship between the sex ratio and the Ne/Nratio (P〉0.05). Moreover, a sex ratio closer to one-to-one does not necessarily mean a larger effective population size. A solution to small effective population size in commercial breeding programs is increasing broodstoek numbers and attempting to maintain a balanced sex ratio. 展开更多
关键词 effective population size (No) Meretrix meretrix microsatellite markers parental contribution sex ratio
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Genetic identification and reiterated captures suggest that the Astyanax mexicanus El Pachón cavefish population is closed and declining
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作者 Laurent Legendre Julie Rode +11 位作者 Isabelle Germon Marie Pavie Carla Quiviger Maxime Policarpo Julien Leclercq Stéphane Père Julien Fumey Carole Hyacinthe Patricia Ornelas-García Luis Espinasa Sylvie Rétaux Didier Casane 《Zoological Research》 SCIE CSCD 2023年第4期701-711,共11页
The sizes of Astyanax mexicanus blind cavefish populations of North-East Mexico are demographic parameters of great importance for investigating a variety of ecological,evolutionary,and conservation issues.However,few... The sizes of Astyanax mexicanus blind cavefish populations of North-East Mexico are demographic parameters of great importance for investigating a variety of ecological,evolutionary,and conservation issues.However,few estimates have been obtained.For these mobile animals living in an environment difficult to explore as a whole,methods based on capture-mark-recapture are appropriate,but their feasibility and interpretation of results depend on several assumptions that must be carefully examined.Here,we provide evidence that minimally invasive genetic identification from captures at different time intervals(three days and three years)can give insights into cavefish population size dynamics as well as other important demographic parameters of interest.We also provide tools to calibrate sampling and genotyping efforts necessary to reach a given level of precision.Our results suggest that the El Pachón cave population is currently very small,of an order of magnitude of a few hundreds of individuals,and is distributed in a relatively isolated area.The probable decline in population size in the El Pachón cave since the last census in 1971 raises serious conservation issues. 展开更多
关键词 CAVEFISH population size Conservation SWABBING Genetic identification
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Role of intraspecific competition in intrinsic growth rate regulation in an Oikopleura dioica(Tunicata)population
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作者 Shuai LI Guangtao ZHANG 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2021年第2期609-622,共14页
Planktonic Oikopleura dioica respond almost instantly to opportunistic algal blooms,but it is unknown whether the population increase can change from an exponential to a logistic model to avoid a final sudden collapse... Planktonic Oikopleura dioica respond almost instantly to opportunistic algal blooms,but it is unknown whether the population increase can change from an exponential to a logistic model to avoid a final sudden collapse.To test the hypothesis that intraspecific competition regulates the intrinsic rate of natural increase(r),density-dependent effects on growth and reproduction performance were investigated in O.dioica via laboratory incubations.Over a large food concentration range,batch maturation was observed above the per capita food supply(PFS)of 8.1µgC/ind.in 4.5 d.Somatic growth was saturated beyond this PFS value,whereas gonad length increased continuously.Below this threshold,individuals reached small body and gonad lengths,and maturation was rarely observed during the incubation period.The gonad/body volume and maturation ratios also increased with the PFS.Instead of the food concentration,the r values were regulated by competition pressure via variability in maturation duration and the proportion of mature individuals in the cohorts.When the minimum food demand was satisfied in the designated generation time,the r value tended to be regulated by the spawning proportion in the population.Otherwise,prolonged development duration and decreased r values were expected. 展开更多
关键词 Oikopleura dioica population size intraspecific competition growth FECUNDITY r_(max)
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Population Size, Genetic Diversity and Molecular Evidence of a Recent Population Bottleneck in Hynobius chinensis, an Endangered Salamander Species
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作者 Eric Gilbert KAZITSA Shichao WEI +7 位作者 Yunhai PU Xingyan WU Lin SONG Lei GAO Fuyuan QIU Yue GUO Zhaoquan ZHU Hua WU 《Asian Herpetological Research》 SCIE CSCD 2018年第3期149-164,共16页
Severe population declines can reduce species to small populations, offering permissive conditions for deleterious processes. For example, following such events, species can become prone to inbreeding and genetic drif... Severe population declines can reduce species to small populations, offering permissive conditions for deleterious processes. For example, following such events, species can become prone to inbreeding and genetic drift which can lead to a loss of genetic diversity and evolutionary potentials. Hynobius chinensis is a poorly studied very rare and declining endangered amphibian species endemic to China in Changyang County. We investigated adult census population size by monitoring breeding populations from 2015 to 2018, developed microsatellite markers from the transcriptome and used them to investigate genetic diversity, and a population bottleneck in this species. We found H. chinensis in 4 different localities in a total area of 2.18 km^2 and estimated the overall adult census population size at 386–404 individuals. The adult census size(mean ± SE) per breeding pond ranged from 44 ± 6 to 141 ± 8 individuals and appeared smaller than that reported in closely related species in undisturbed habitats. We developed and characterized 13 microsatellite markers in total. Analysis of data at 7 loci(N = 118) in Hardy-Weinberg equilibrium gathered from the largest population showed that genetic diversity level was low. The average number of alleles per locus was 2.14. The observed and expected heterozygosities averaged 0.38 and 0.40, respectively. The inbreeding coefficient was –0.06. All tests performed to investigate a population bottleneck, i.e. The Garza-Williamson test, Heterozygosity excess test, Mode shift test of allele frequency, and effective population size estimates detected a population bottleneck. The contemporary and the historical effective population sizes were estimated at 36 and 234 individuals, respectively. We argue that as bottleneck effects, the studied population may have become prone to genetic drift and inbreeding, losing microsatellite alleles and heterozygosity. Our results suggest that populations of H. chinensismay have been extirpated in the study area. 展开更多
关键词 TRANSCRIPTOME microsatellites adult census population size effective population size genetic drift INBREEDING
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An Effective Runge-Kutta Optimizer Based on Adaptive Population Size and Search Step Size
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作者 Ala Kana Imtiaz Ahmad 《Computers, Materials & Continua》 SCIE EI 2023年第9期3443-3464,共22页
A newly proposed competent population-based optimization algorithm called RUN,which uses the principle of slope variations calculated by applying the Runge Kutta method as the key search mechanism,has gained wider int... A newly proposed competent population-based optimization algorithm called RUN,which uses the principle of slope variations calculated by applying the Runge Kutta method as the key search mechanism,has gained wider interest in solving optimization problems.However,in high-dimensional problems,the search capabilities,convergence speed,and runtime of RUN deteriorate.This work aims at filling this gap by proposing an improved variant of the RUN algorithm called the Adaptive-RUN.Population size plays a vital role in both runtime efficiency and optimization effectiveness of metaheuristic algorithms.Unlike the original RUN where population size is fixed throughout the search process,Adaptive-RUN automatically adjusts population size according to two population size adaptation techniques,which are linear staircase reduction and iterative halving,during the search process to achieve a good balance between exploration and exploitation characteristics.In addition,the proposed methodology employs an adaptive search step size technique to determine a better solution in the early stages of evolution to improve the solution quality,fitness,and convergence speed of the original RUN.Adaptive-RUN performance is analyzed over 23 IEEE CEC-2017 benchmark functions for two cases,where the first one applies linear staircase reduction with adaptive search step size(LSRUN),and the second one applies iterative halving with adaptive search step size(HRUN),with the original RUN.To promote green computing,the carbon footprint metric is included in the performance evaluation in addition to runtime and fitness.Simulation results based on the Friedman andWilcoxon tests revealed that Adaptive-RUN can produce high-quality solutions with lower runtime and carbon footprint values as compared to the original RUN and three recent metaheuristics.Therefore,with its higher computation efficiency,Adaptive-RUN is a much more favorable choice as compared to RUN in time stringent applications. 展开更多
关键词 Optimization Runge Kutta(RUN) metaheuristic algorithm exploration EXPLOITATION population size adaptation adaptive search step size
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Population assessment and habitat associations of the Visayan Hornbill(Penelopides panini)in Northwest Panay,Philippines
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作者 Holly Isabelle Mynott David Charles Lee +4 位作者 Rhea Aranas Santillan Christian Jürgen Schwarz Benjamin Tacud Arcel Dryden Fernandez Daphne Kerhoas 《Avian Research》 SCIE CSCD 2021年第4期612-622,共11页
Background:Seven out of ten hornbill species in the Philippines are threatened with extinction.Among these is the endangered Visayan Hornbill(Penelopides panini),found on the islands of Panay and Negros.Threatened by ... Background:Seven out of ten hornbill species in the Philippines are threatened with extinction.Among these is the endangered Visayan Hornbill(Penelopides panini),found on the islands of Panay and Negros.Threatened by habitat loss and hunting,its population size is thought to have declined from 1800 individuals 20 years ago to less than 1000.However,a recent study on Negros estimated 3564 individuals across three core forest blocks.This study aims to quantify the Visayan Hornbill population size in and around the Northwest Panay Peninsula Natural Park(NWPPNP)on Panay,the largest contiguous low-elevation forest landscape remaining across its range,and its broad habitat associations across a gradient of environmental degradation.Methods:Hornbills were surveyed using 10-min distance sampling point counts(n=367)along transects(average length 1.1 km).Environmental variables were recorded along transects,while habitat was classified into primary forest,secondary forest,plantation,or open habitat.Distance software was used to estimate population densities stratified by habitat,with the overall population estimate taken as a mean of habitat density estimates weighted by habitat area.Using generalized linear mixed models,hornbill occurrence was modelled using combinations of nine environmental variables as main and two-way fixed effects.Results:Surveys covered 204.4 km^(2) of the 374.8 km^(2) Northwest Panay Peninsula.Hornbills were not recorded in plantations or open habitats.Hornbill density was significantly higher in primary forest(17.8 individuals/km~2±26.9%CV)than in secondary forest(3.7 individuals/km^(2)±33.2%CV;z=15.212,P<0.001).The overall population estimate for the NWPPNP and environs is 2109 individuals,and 2673 individuals for the entire Northwest Panay Peninsula.Hornbill presence was best explained by a model including distance from the Park boundary alongside five interaction effects and transect as a random effect.Distance,and the interaction between distance and medium-sized trees were significant predictors of hornbill presence.Conclusions:Our study evidences the habitat preference of the Visayan Hornbill,highlights the importance of the NWPPNP for the species'conservation,and provides strong evidence for re-assessing the global population size. 展开更多
关键词 Distance sampling Endangered species GLMM Hornbill Point count population size Protected area
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Population size and distribution of seabirds in the Cosmonaut Sea,Southern Ocean
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作者 LIN Zixuan LIU Meijun +3 位作者 YAN Denghui GAO Kai LIU Xiangwan DENG Wenhong 《Advances in Polar Science》 CSCD 2022年第3期291-298,共8页
The Cosmonaut Sea is one of the less studied ecosystems in the Southern Hemisphere.Unlike other seas which were near to coastal regions,however,few studies exist on the top predators in this zone.From December 2019 to... The Cosmonaut Sea is one of the less studied ecosystems in the Southern Hemisphere.Unlike other seas which were near to coastal regions,however,few studies exist on the top predators in this zone.From December 2019 to January 2020,a survey of seabirds was carried out on the board icebreaker R/V Xuelong 2 in the Cosmonaut Sea and the Cooperation Sea.Twenty-three bird species were recorded.Antarctic petrel(Thalassoica antarctica),Antarctic prion(Pachyptila desolata),and Arctic tern(Sterna paradisaea)were the most abundant species.A total of about 37500 birds belonging to 23 species were recorded.Around 23%of the region had no record of birds.A large number of birds was recorded in 39°E-40°E,44°E-46°E and 59°E-60°E.Many areas,such as 33°E-35°E,39°E-41°E,44°E-46°E and 59°E-60°E show a great richness.More than two-thirds of seabirds(71%)were observed in the zone near the ocean front.The prediction of the distributions of the most dominant species Antarctic petrel also showed that the area near the ocean front region had an important ecological significance for seabirds.The results suggest that the distribution of seabirds in the Cosmonaut Sea is highly heterogenous. 展开更多
关键词 Cosmonaut Sea seabirds DISTRIBUTION DIVERSITY population size
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Habitat suitability and influencing factors of a threatened highland flagship species,the Black-necked Crane(Grus nigricollis)
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作者 Hongying Xu Ru Jia +7 位作者 Hongrui Lv Ge Sun Dongping Liu Hongyan Yu Cunxin Ma Tian Ma Wenhong Deng Guogang Zhang 《Avian Research》 2025年第2期138-148,共11页
Evaluating the habitat suitability of flagship species and its key influencing factors is vital for understanding potential conservation issues and developing coping strategies.We surveyed the wintering population siz... Evaluating the habitat suitability of flagship species and its key influencing factors is vital for understanding potential conservation issues and developing coping strategies.We surveyed the wintering population size and distribution of the Black-necked Crane(Grus nigricollis)in the Yarlung Zangbo River Basin(YZRB)from 10 to 29 January 2022,and predicted the current potentially suitable habitat distribution and its effective factors using the Max Ent model.A total of 9337 wintering Black-necked Cranes were recorded in the YZRB in 2022,76.58%of which were primarily found in Lhunzub,Samzhubze,Namling,and Lhaze.Compared to 2018,the crane population has exhibited a notable decline in Samzhubze and Taktse,likely due to farmland plowing,winter irrigation,changes in agricultural practices,road construction and hydraulic projects.The crane population within various counties exhibited a significant positive correlation with the suitable habitat area(r=0.70,P=0.002,n=17).We also found that the currently suitable habitat area covered 17,204 km~2,of which only 3244 km~2(18.86%)was effectively protected at the national level,which was predominantly distributed in farmland and rangeland habitats characterized by gentle slopes,altitudes not exceeding 4500 m,and proximity to human settlements along rivers,where suitable isothermal values(51)and less seasonal precipitation(20 mm)prevail.Our study will be helpful for formulating reasonable conservation strategies to protect the core population of this threatened highland flagship species. 展开更多
关键词 Black-necked Crane Flag species Max Ent model population size Potentially suitable habitat Yarlung Zangbo River
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