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Simulation Analysis on Spatial Pattern of Urban Population in Shenyang City,China in Late 20th Century 被引量:5
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作者 QIN Zhiqin ZHANG Pingyu 《Chinese Geographical Science》 SCIE CSCD 2011年第1期110-118,共9页
The spatial distribution of urban population can reflect significantly urban functions and development status. Shenyang, as a typical old industrial city in China, has experienced considerable changes in spatial distr... The spatial distribution of urban population can reflect significantly urban functions and development status. Shenyang, as a typical old industrial city in China, has experienced considerable changes in spatial distribution of population in the process of urban transformation, resulting in the change of urban spatial structure. Based on the sub-district data of Chinese national population censuses in 1982, 1990 and 2000, this study simulates the evolution pattern of spatial distribution of urban population in Shenyang City. Using statistical method and exploratory spatial data analysis (ESDA), we found that the population distribution, on the whole, has presented a balanced and decentralized trend since the 1980s, which characterizes with Chinese suburbanization. Furthermore, based on the investigation of the pattern of population distribution, it is concluded that the negative exponential model fitted the distribution best, and population concentration in the inner suburb kept increasing gradually, meanwhile, the spatial structure of population distribution has presented a polycentric feature since the 1980s. The parameters of the model show that population in the urban core concentrate significantly all the time. The increase of population in the inner suburb influences the population distribution pattern more and more importantly, but the concentration intensity of population cores in inner suburb is still low. 展开更多
关键词 population distribution urban spatial structure simulation analysis Shenyang City
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Simulation of Potential Production and Optimum Population Quantitative Indices for the Second Hybrid Rice 被引量:1
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作者 YAN Li-Jiao YAO Zhong ZHENG Zhi-ming LI Hua-bin 《Agricultural Sciences in China》 CAS CSCD 2006年第7期498-505,共8页
The article established the HDRICE model by modifying the structure of the ORYZA1 model and revising its parameters by field experiments. The HDRICE model consists of the modules of morphological development of rice, ... The article established the HDRICE model by modifying the structure of the ORYZA1 model and revising its parameters by field experiments. The HDRICE model consists of the modules of morphological development of rice, daily dry matter accumulation and partitioning, daily CO2 assimilation of the canopy, leaf area, and tiller development. The model preferably simulated the dynamic rice development because of the thorough integration of the effects of temperature and light on the rates of rice development, photosynthesis, respiration, and. other ecophysiological processes. In addition, this model has attainable grain yield in the test experiment that showed the potential yield of cultivar Xieyou 46 ranged from 11 to 13 tons ha-~. Besides, the model was used to optimize the combinations of the transplanting date, seedling age and density for cultivar Xieyou 46 at Jinhua area, and the population quantitative indices to attain the potential yield such as maximum stems, effective panicles, filled grain number/leaf area, and so on. The result showed that the combination of transplanting date on July 25, seedling age of 35 days and base seedling density of 1.33 x 106ha-1 is the optimum combination for the second hybrid rice production in Jinhua County, China. And the maximum stems, the effective panicles, the filled grain per panicle, the peak of optimum LAI, LAI in later filling stage, and the filled grain number/leaf were 6.03×10^6ha, 3.99×10^6ha, 119.2, 8.59, 5-6, and 0.64, respectively. 展开更多
关键词 simulation MODEL potential production optimum population quantitative indices second hybrid rice
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Population synthesis of planet formation using a torque formula with dynamic effects 被引量:1
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作者 Takanori Sasaki Toshikazu Ebisuzaki 《Geoscience Frontiers》 SCIE CAS CSCD 2017年第2期215-222,共8页
Population synthesis studies into planet formation have suggested that distributions consistent with observations can only be reproduced if the actual Type Ⅰ migration timescale is at least an order of magnitude long... Population synthesis studies into planet formation have suggested that distributions consistent with observations can only be reproduced if the actual Type Ⅰ migration timescale is at least an order of magnitude longer than that deduced from linear theories.Although past studies considered the effect of the Type I migration of protoplanetary embryos,in most cases they used a conventional formula based on static torques in isothermal disks,and employed a reduction factor to account for uncertainty in the mechanism details.However,in addition to static torques,a migrating planet experiences dynamic torques that are proportional to the migration rate.These dynamic torques can impact on planet migration and predicted planetary populations.In this study,we derived a new torque formula for Type Ⅰ migration by taking into account dynamic corrections.This formula was used to perform population synthesis simulations with and without the effect of dynamic torques.In many cases,inward migration was slowed significantly by the dynamic effects.For the static torque case,gas giant formation was effectively suppressed by Type I migration;however,when dynamic effects were considered,a substantial fraction of cores survived and grew into gas giants. 展开更多
关键词 Planetary formation population synthesis Type migration
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Simulation of Spread of Infectious Diseases and Population Mobility in a Deterministic Epidemic Patch Model 被引量:1
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作者 Ariel Felix Gualtieri Juan Pedro Hecht 《Journal of Life Sciences》 2013年第3期252-258,共7页
Computer simulation models are widely applied in various areas of the health care sector, including the spread of infectious diseases. Patch models involve explicit movements of people between distinct locations. The ... Computer simulation models are widely applied in various areas of the health care sector, including the spread of infectious diseases. Patch models involve explicit movements of people between distinct locations. The aim of the present work has been designed and explored a patch model with population mobility between different patches and between each patch and an external population. The authors considered a SIR (susceptible-infected-recovered) scheme. The model was explored by computer simulations. The results show how endemic levels are reached in all patches of the system. Furthermore, the performed explorations suggest that the people mobility between patches, the immigration from outside the system and the infection rate in each patch, are factors that may influence the dynamics of epidemics and should be considered in health policy planning. 展开更多
关键词 simulation spread of infectious diseases population mobility epidemic patch model SIR model.
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A Guide to Population Modelling for Simulation 被引量:2
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作者 Leif Gustafsson Mikael Sternad 《Open Journal of Modelling and Simulation》 2016年第2期55-92,共38页
This paper outlines the fundamentals of a consistent theory of numerical modelling of a population system under study. The focus is on the systematic work to construct an executable simulation model. There are six fun... This paper outlines the fundamentals of a consistent theory of numerical modelling of a population system under study. The focus is on the systematic work to construct an executable simulation model. There are six fundamental choices of model category and model constituents to make. These choices have a profound impact on how the model is structured, what can be studied, possible introduction of bias, lucidity and comprehensibility, size, expandability, performance of the model, required information about the system studied and its range of validity. The first choice concerns a discrete versus a continuous description of the population system under study—a choice that leads to different model categories. The second choice is the model representation (based on agents, entities, compartments or situations) used to describe the properties and behaviours of the objects in the studied population. Third, incomplete information about structure, transitions, signals, initial conditions or parameter values in the system under study must be addressed by alternative structures and statistical means. Fourth, the purpose of the study must be explicitly formulated in terms of the quantities used in the model. Fifth, irrespective of the choice of representation, there are three possible types of time handling: Event Scheduling, Time Slicing or Micro Time Slicing. Sixth, start and termination criteria for the simulation must be stated. The termination can be at a fixed end time or determined by a logical condition. Population models can thereby be classified within a unified framework, and population models of one type can be translated into another type in a consistent way. Understanding the pros and cons for different choices of model category, representation, time handling etc. will help the modeller to select the most appropriate type of model for a given purpose and population system under study. By understanding the rules for consistent population modelling, an appropriate model can be created in a systematic way and a number of pitfalls can be avoided. 展开更多
关键词 population Model simulation Methodology simulation Modelling Theory of simulation
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Validation and Reproducibility of an Iodine-specific Food Frequency Questionnaire for Evaluating Dietary Iodine Intake in the Elderly Population of Gansu Province,China
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作者 Qi Jin Tao Wang +8 位作者 Meina Ji Jizun Wang Xing Ma Xinyi Wang Jiaqi Wang Hexi Zhang Yanling Wang Wenxing Guo Wanqi Zhang 《Biomedical and Environmental Sciences》 2025年第9期1168-1172,共5页
Iodine is an essential element for the synthesis of thyroid hormones.Iodine deficiency increases the burden on thyroid function and causes harm to health.The identification of convenient and reliable biomarkers for as... Iodine is an essential element for the synthesis of thyroid hormones.Iodine deficiency increases the burden on thyroid function and causes harm to health.The identification of convenient and reliable biomarkers for assessing iodine nutritional status is essential for evaluating iodine intake.Urinary iodine concentration(UIC)is commonly used for population level iodine status assessment but is less reliable for individuals.A 24-h urine sample is more accurate but difficult to collect[1].Thyroid volume(Tvol)and goiter rate are suitable for evaluating the long-term iodine nutritional status in populations[2].Blood indicator collection is an invasive procedure. 展开更多
关键词 goiter rate dietary iodine intake urinary iodine concentration iodine specific food frequency questionnaire thyroid volume synthesis thyroid hormonesiodine elderly population iodine concentration uic
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Relationship between trawl selectivity and fish body size in a simulated population 被引量:1
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作者 孙鹏 梁振林 +2 位作者 黄六一 唐衍力 何鑫 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 2013年第2期327-333,共7页
Trawl is a main fishing gear in Chinese fishery,capturing large fish and letting small ones at large.However,long-term use of trawl would result in changes of phenotypic traits of the fish stocks,such as smaller size-... Trawl is a main fishing gear in Chinese fishery,capturing large fish and letting small ones at large.However,long-term use of trawl would result in changes of phenotypic traits of the fish stocks,such as smaller size-at-age and earlier age-at-maturation.In this study,we simulated a fish population with size characteristics of trawl fishing and the population produces one generation of offspring and lives for one year,used trawl to exploit the simulated fish population,and captured individuals by body size.We evaluated the impact of the changes on selectivity parameters,such as selective range and the length at 50% retention.Under fishing pressure,we specified the selectivity parameters,and determined that smaller selection rates and greater length at 50% retention were associated with an increased tendency towards miniaturization. 展开更多
关键词 selectivity parameters trawl selectivity simulated population
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Resampling Simulator for the Probability of Detecting Invasive Species in Large Populations
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作者 David E. Legg Jeffrey G. Fidgen Krista L. Ryall 《Journal of Software Engineering and Applications》 2014年第6期498-505,共8页
This paper proposes a resampling simulator that will calculate probabilities of detecting invasive species infesting hosts that occur in large numbers. Different methods were examined to determine the bias of observed... This paper proposes a resampling simulator that will calculate probabilities of detecting invasive species infesting hosts that occur in large numbers. Different methods were examined to determine the bias of observed cumulative distribution functions (c.d.f.s), generated from prototype resampling simulators. One involved seeing if they matched theoretical c.d.f.s, which were generated using formulae for calculating the probability of the union of many events (union formulae), which are known to be correct. Others involved assessing the bias of observed c.d.f.s, generated from using prototype resampling simulators operating on much larger simulated populations, when computation of theoretical c.d.f.s from the union formulae was not practical. Examples are given for using the proposed resampling simulator for detecting an invasive insect pest within the context of an invasive species management system. 展开更多
关键词 RESAMPLING simulATOR Detection of INVASIVE SPECIES INVASIVE SPECIES Management System Large populationS
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A Class of Second-Order Characteristic Difference Schemes for a Model of Population Dynamics
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作者 陈绍炳 孙志忠 《Journal of Southeast University(English Edition)》 EI CAS 1998年第2期135-139,共5页
In this paper, a three level characteristic difference scheme is proposed for the model of age structured population with history dependent mortality and natality. It is proved that the scheme is second order converge... In this paper, a three level characteristic difference scheme is proposed for the model of age structured population with history dependent mortality and natality. It is proved that the scheme is second order convergent in the discrete l ∞ norm. 展开更多
关键词 finite difference simulation population dynamics CONVERGENCE
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AN^2 APPLICATION IN THE METRODS OF POPULATION GEOGRAPHY
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作者 Zhang Shulin(Dept. of Geography, Chongqing Teachers College, Chongqing 630047,People’s Republic of China) 《Journal of Geographical Sciences》 SCIE CSCD 1995年第1期87-90,共4页
This paper tries to present another theoretical view in the study of population geography by applying the principle of artificial neural network.It is our view that the approach to population geography study is of two... This paper tries to present another theoretical view in the study of population geography by applying the principle of artificial neural network.It is our view that the approach to population geography study is of two kinds so far: the synthetic analysis and An2 synthetic analysis. 展开更多
关键词 Aritifical Neural Network (AN^2) CONNECTIONISM population geography research approach analysis by synthesis
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Effect of localized oil spills on Atlantic loggerhead population dynamics
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作者 Margaret-Rose Leung Melissa Marchand +2 位作者 Samantha Stykel My Huynh José D. Flores 《Open Journal of Ecology》 2012年第3期109-114,共6页
The purpose of this study is to analyze the population dynamics of loggerhead sea turtles (Caretta caretta) affected by localized oil spills. Methods include development of a spatial, stage-classified matrix model par... The purpose of this study is to analyze the population dynamics of loggerhead sea turtles (Caretta caretta) affected by localized oil spills. Methods include development of a spatial, stage-classified matrix model parameterized for the following primary loggerhead populations: Gulf of Mexico, western North Atlantic Ocean, and Florida peninsula. Oil spills are simulated deterministically in each population's nesting region, with 1) oil-induced mortality ranging from 25% to 100% and 2) stage classes affected either proportionally or equally. A transient sensitivity analysis was performed to determine the parameters most influential to the population growth rate. Results suggest that increased protection and understanding of young sea turtles found in the Sargasso Sea is essential to the survival of the species. In addition, findings provide insights into the population dynamics of the At- lantic loggerhead turtles and identify conservation measures appropriate in each oil spill case. 展开更多
关键词 LOGGERHEAD Sea TURTLE OILS SPILL Matrix Model simulations population Ecology
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The Probability of Pairwise Shared Ancestry and the Expected Number of Pairs of k-th Cousins in a Population Sample
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作者 Philip M. Service 《Natural Science》 CAS 2022年第11期472-482,共11页
An analytical solution is derived for the probability that a random pair of individuals from a panmictic population of size N will share ancestors who lived G generations previously. The analysis is extended to obtain... An analytical solution is derived for the probability that a random pair of individuals from a panmictic population of size N will share ancestors who lived G generations previously. The analysis is extended to obtain 1) the probability that a sample of size s will contain at least one pair of (G - 1)<sup>th</sup> cousins;and 2) the expected number of pairs of (G - 1)<sup>th</sup> cousins in that sample. Solutions are given for both monogamous and promiscuous (non-monogamous) cases. Simulation results for a population size of N = 20,000 closely approximate the analytical expectations. Simulation results also agree very well with previously derived expectations for the proportion of unrelated individuals in a sample. The analysis is broadly consistent with genetic estimates of relatedness among a sample of 406 Danish school children, but suggests that a different genetic study of a heterogenous sample of Europeans overestimates the frequency of cousin pairs by as much as one order of magnitude. 展开更多
关键词 Pairwise Shared Ancestry simulation Denmark Number of Cousins population Sample population Structure
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Hydrate agglomeration modeling and pipeline hydrate slurry flow behavior simulation 被引量:8
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作者 Guangchun Song Yuxing Li +3 位作者 Wuchang Wang Kai Jiang Zhengzhuo Shi Shupeng Yao 《Chinese Journal of Chemical Engineering》 SCIE EI CAS CSCD 2019年第1期32-43,共12页
Dynamic modeling and numerical simulation of hydrate slurry flow behavior are of great importance to offshore hydrate management.For this purpose, a dynamic model of hydrate agglomeration was proposed in this paper.Ba... Dynamic modeling and numerical simulation of hydrate slurry flow behavior are of great importance to offshore hydrate management.For this purpose, a dynamic model of hydrate agglomeration was proposed in this paper.Based on population balance equation, the frame of the dynamic model was established first, which took both hydrate agglomeration and hydrate breakage into consideration.Then, the calculating methods of four key parameters involved in the dynamic model were given according to hydrate agglomeration dynamics.The four key parameters are collision frequency, agglomeration efficiency, breakage frequency and the size distribution of sub particles resulting from particle breakage.After the whole dynamic model was built, it was combined with several traditional solid–liquid flow models and then together solved by the CFD software FLUENT 14.5.Finally, using this method, the influences of flow rate and hydrate volume fraction on hydrate particle size distribution, hydrate volume concentration distribution and pipeline pressure drop were simulated and analyzed. 展开更多
关键词 HYDRATE AGGLOMERATION Flow behavior Dynamic model Numerical simulation population BALANCE
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Modeling and simulation for individualized therapy of amisulpride in Chinese patients with schizophrenia:focus on inter interindi⁃vidual variability,therapeutic reference range and laboratory alert level 被引量:7
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作者 HUANG Shan-qing LI Lu +7 位作者 WANG Zhan-zhang XIAO Tao LI Xiao-lin LIU Shu-jing ZHANG Ming LU Hao-yang WEN Yu-guan SHANG De-wei 《中国药理学与毒理学杂志》 CAS 北大核心 2021年第9期661-662,共2页
OBJECTIVE To explain the high inter-individual variability and the frequency of exceeding the therapeutic reference range and the laboratory alert level of amisulpride,a popula⁃tion pharmacokinetic model in Chinese pa... OBJECTIVE To explain the high inter-individual variability and the frequency of exceeding the therapeutic reference range and the laboratory alert level of amisulpride,a popula⁃tion pharmacokinetic model in Chinese patients with schizophrenia was built based on therapeu⁃tic drug monitoring data to guide individualized therapy.METHODS Plasma concentration data(330 measurements from 121 patients)were ana⁃lyzed using a nonlinear mixed-effects model⁃ing approach with first-order conditional estima⁃tion with interaction(FOCE I).The concentra⁃tions of amisulpride were detected by HPLC-MS/MS.Age,weight,sex,combination medication history and renal function status were evaluated as main covariates.The model was internally val⁃idated using goodness-of-fit,bootstrap and nor⁃malized prediction distribution error.Recom⁃mended dosage regimens for patients with key covariates were estimated on the basis of Monte Carlo simulations and the established model.RESULTS A one-compartment model with first-order absorption and elimination was found to adequately characterize amisulpride concentra⁃tion in Chinese patients with schizophrenia.The population estimates of the apparent volume of distribution(V/F)and apparent clearance(CL/F)were 12.7 L and 1.12 L·h-1,respectively.Age sig⁃nificantly affected the clearance of amisulpride and the final model was as follow:CL/F=1.04×(AGE/32)-0.624(L·h-1).To avoid exceeding the lab⁃oratory alert level(640μg·L-1),the model-based simulation results showed that the recommended dose of amisulpride was no more than 600 mg per day for patients aged 60 years,800 mg per day for those aged 40 years and 1200 mg per day for those aged 20 years,respectively.CON⁃CLUSION Dosage optimization of amisulpride can be carried out according to age to reduce the risk of adverse reactions.The model can be used as a suitable tool for designing individual⁃ized therapy for Chinese patients with schizo⁃phrenia. 展开更多
关键词 AMISULPRIDE population pharmacoki⁃netics therapeutic drug monitoring modeling and simulation individualized therapy
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A state-of-the-art review on single drop study in liquid–liquid extraction:Experiments and simulations 被引量:2
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作者 Jiyizhe Zhang Yundong Wang +1 位作者 Geoffrey WStevens Weiyang Fei 《Chinese Journal of Chemical Engineering》 SCIE EI CAS CSCD 2019年第12期2857-2875,共19页
The experimental and numerical investigations of single drop in liquid/liquid extraction system have been reviewed with particular focus on experimental techniques and computational fluid dynamic simulation approaches... The experimental and numerical investigations of single drop in liquid/liquid extraction system have been reviewed with particular focus on experimental techniques and computational fluid dynamic simulation approaches.Comprehensive surveys of available experimental techniques and numerical approaches for single drop rising and falling were given.Subsequently,single drop mass transfer was also reviewed both experimentally and numerically.Additionally,single drop breakage and coalescence process and the influencing factors were summarized and compared,so as to establish sub-models for population balance model.Future directions on single drop mass transfer,drop breakage and coalescence were suggested.It is believed that the single drop is a powerful tool to assist extraction process design from lab-scale to pilot-scale. 展开更多
关键词 SOLVENT extraction Mass transfer Single DROP DROP BREAKAGE and COALESCENCE CFD simulation population BALANCE model
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CFD-PBE simulation of gas-phase hydrodynamics in a gas-liquid-solid combined loop reactor 被引量:2
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作者 Qi Nana Zhang Kai +2 位作者 Xu Gang Yang Yongping Zhang Hu 《Petroleum Science》 SCIE CAS CSCD 2013年第2期251-261,共11页
The computational fluid dynamics (CFD)-population balance equations (PBE) coupled model is employed to investigate the hydrodynamics in a gas-slurry internal loop reactor with external slurry circulation. The pred... The computational fluid dynamics (CFD)-population balance equations (PBE) coupled model is employed to investigate the hydrodynamics in a gas-slurry internal loop reactor with external slurry circulation. The predicted radial profiles of local gas holdup and bubble diameter are in good agreement with the corresponding experimental data. The spatio-temporal velocity profile of the gas phase reveals that the upward movement of gas is slowed down and the residence time of gas is prolonged by the downward momentum of the slurry, introduction of the external slurry can greatly improve the uniformity of gas holdup distribution in the reactor, especially in the downcomer-tube action region. Moreover, the interaction between the downward slurry and upward gas can lead to small bubble size and high interfacial area as well as good mass and heat transfer. The above results suggest the function of external slurry circulation for the internal loop reactor and would be helpful for optimizing the design and scale up of reactors. 展开更多
关键词 CFD-PBE simulation external slurry circulation GAS-LIQUID-SOLID hydrodynamics population balance model
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Numerical simulation of flocculation and settling behavior of whole-tailings particles in deep-cone thickener 被引量:13
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作者 阮竹恩 李翠平 石聪 《Journal of Central South University》 SCIE EI CAS CSCD 2016年第3期740-749,共10页
Rapid dewatering and thickening of whole-tailings with ultrafine particles is one of the most important processes for the whole-tailings paste preparation. Deep-cone thickener, a kind of such process for the flocculat... Rapid dewatering and thickening of whole-tailings with ultrafine particles is one of the most important processes for the whole-tailings paste preparation. Deep-cone thickener, a kind of such process for the flocculation and settling of whole-tailings, is particularly necessary to study. However, there exist many problems in observing the flocculation and settling process of whole-tailings, as well as the particle size distribution(PSD) of whole-tailings floccules in deep-cone thickener. Population balance model(PBM) is applied to predict the PSD in deep-cone thickener, and LUO model and GHADIRI model are employed to study the aggregation and fragmentation mechanism of the whole-tailings particles, respectively. Through three-dimensional numerical simulation on the whole-tailings flocculation and settling in deep-cone thickener using computational fluid dynamics(CFD)-PBM, the distribution of density and turbulent kinetic energy in deep-cone thickener were obtained, at the same time the spatio-temporal changes of whole-tailings floccules particle size distribution are analyzed. Finally, the major flocculation position in deep-cone thickener is found and the flocculation settling rules of whole-tailings are achieved. 展开更多
关键词 whole-tailings particles flocculation settling numerical simulation deep-cone thickener population balance model
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Bubble size modeling approach for the simulation of bubble columns 被引量:2
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作者 Xibao Zhang Zhenghong Luo 《Chinese Journal of Chemical Engineering》 SCIE EI CAS CSCD 2023年第1期194-200,共7页
The constant bubble size modeling approach(CBSM)and variable bubble size modeling approach(VBSM)are frequently employed in Eulerian–Eulerian simulation of bubble columns.However,the accuracy of CBSM is limited while ... The constant bubble size modeling approach(CBSM)and variable bubble size modeling approach(VBSM)are frequently employed in Eulerian–Eulerian simulation of bubble columns.However,the accuracy of CBSM is limited while the computational efficiency of VBSM needs to be improved.This work aims to develop method for bubble size modeling which has high computational efficiency and accuracy in the simulation of bubble columns.The distribution of bubble sizes is represented by a series of discrete points,and the percentage of bubbles with various sizes at gas inlet is determined by the results of computational fluid dynamics(CFD)–population balance model(PBM)simulations,whereas the influence of bubble coalescence and breakup is neglected.The simulated results of a 0.15 m diameter bubble column suggest that the developed method has high computational speed and can achieve similar accuracy as CFD–PBM modeling.Furthermore,the convergence issues caused by solving population balance equations are addressed. 展开更多
关键词 Bubble column Bubble size modeling Numerical simulation population balance equations Computational efficiency
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Numerical Simulation of Mixing in a Micro-well Scale Bioreactor by Computational Fluid Dynamics
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作者 Hu Zhang Sally Lamping Parviz Ayazi Shamlou 《Chemical Research in Chinese Universities》 SCIE CAS CSCD 2002年第2期113-116,共4页
The introduction of the multi well plate miniaturisation technology with its associated automated dispensers, readers and integrated systems coupled with advances in life sciences has a propelling effect on the rate ... The introduction of the multi well plate miniaturisation technology with its associated automated dispensers, readers and integrated systems coupled with advances in life sciences has a propelling effect on the rate at which new potential drug molecules are discovered. The translation of these discoveries to real outcome now demands parallel approaches which allow large numbers of process options to be rapidly assessed. The engineering challenges in achieving this provide the motivation for the proposed work. In this work we used computational fluid dynamics(CFD) analysis to study flow conditions in a gas liquid contactor which has the potential to be used as a fermenter on a multi well format. The bioreactor had a working volume of 6 5 mL with the major dimensions equal to those of a single well of a 24 well plate. The 6 5 mL bioreactor was mechanically agitated and aerated by a single sparger placed beneath the bottom impeller. Detailed numerical procedure for solving the governing flow equations is given. The CFD results are combined with population balance equations to establish the size of the bubbles and their distribution in the bioreactor. Power curves with and without aeration are provided based on the simulated results. 展开更多
关键词 CFD Numerical simulation Fermenter Snapshot method Two fluid population balance
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An Algorithm for the Stochastic Simulation of Gene Expression and Heterogeneous Population Dynamics
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作者 Daniel A.Charlebois Jukka Intosalmi +1 位作者 Dawn Fraser Mads Kærn 《Communications in Computational Physics》 SCIE 2011年第1期89-112,共24页
We present an algorithm for the stochastic simulation of gene expression and heterogeneous population dynamics.The algorithm combines an exact method to simulate molecular-level fluctuations in single cells and a cons... We present an algorithm for the stochastic simulation of gene expression and heterogeneous population dynamics.The algorithm combines an exact method to simulate molecular-level fluctuations in single cells and a constant-number Monte Carlo method to simulate time-dependent statistical characteristics of growing cell populations.To benchmark performance,we compare simulation results with steadystate and time-dependent analytical solutions for several scenarios,including steadystate and time-dependent gene expression,and the effects on population heterogeneity of cell growth,division,and DNA replication.This comparison demonstrates that the algorithm provides an efficient and accurate approach to simulate how complex biological features influence gene expression.We also use the algorithm to model gene expression dynamics within"bet-hedging"cell populations during their adaption to environmental stress.These simulations indicate that the algorithm provides a framework suitable for simulating and analyzing realistic models of heterogeneous population dynamics combining molecular-level stochastic reaction kinetics,relevant physiological details and phenotypic variability. 展开更多
关键词 Constant-number Monte Carlo stochastic simulation algorithm gene expression heterogeneous population dynamics
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