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Cat Swarm Algorithm Generated Based on Genetic Programming Framework Applied in Digital Watermarking
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作者 Shu-Chuan Chu Libin Fu +2 位作者 Jeng-Shyang Pan Xingsi Xue Min Liu 《Computers, Materials & Continua》 2025年第5期3135-3163,共29页
Evolutionary algorithms have been extensively utilized in practical applications.However,manually designed population updating formulas are inherently prone to the subjective influence of the designer.Genetic programm... Evolutionary algorithms have been extensively utilized in practical applications.However,manually designed population updating formulas are inherently prone to the subjective influence of the designer.Genetic programming(GP),characterized by its tree-based solution structure,is a widely adopted technique for optimizing the structure of mathematical models tailored to real-world problems.This paper introduces a GP-based framework(GPEAs)for the autonomous generation of update formulas,aiming to reduce human intervention.Partial modifications to tree-based GP have been instigated,encompassing adjustments to its initialization process and fundamental update operations such as crossover and mutation within the algorithm.By designing suitable function sets and terminal sets tailored to the selected evolutionary algorithm,and ultimately derive an improved update formula.The Cat Swarm Optimization Algorithm(CSO)is chosen as a case study,and the GP-EAs is employed to regenerate the speed update formulas of the CSO.To validate the feasibility of the GP-EAs,the comprehensive performance of the enhanced algorithm(GP-CSO)was evaluated on the CEC2017 benchmark suite.Furthermore,GP-CSO is applied to deduce suitable embedding factors,thereby improving the robustness of the digital watermarking process.The experimental results indicate that the update formulas generated through training with GP-EAs possess excellent performance scalability and practical application proficiency. 展开更多
关键词 Cat swarm algorithm genetic programming digital watermarking update mode mode generation framework
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A hybrid genetic algorithm to the program optimization model based on a heterogeneous network
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作者 CHEN Hang DOU Yajie +3 位作者 CHEN Ziyi JIA Qingyang ZHU Chen CHEN Haoxuan 《Journal of Systems Engineering and Electronics》 2025年第4期994-1005,共12页
Project construction and development are an impor-tant part of future army designs.In today’s world,intelligent war-fare and joint operations have become the dominant develop-ments in warfare,so the construction and ... Project construction and development are an impor-tant part of future army designs.In today’s world,intelligent war-fare and joint operations have become the dominant develop-ments in warfare,so the construction and development of the army need top-down,top-level design,and comprehensive plan-ning.The traditional project development model is no longer suf-ficient to meet the army’s complex capability requirements.Projects in various fields need to be developed and coordinated to form a joint force and improve the army’s combat effective-ness.At the same time,when a program consists of large-scale project data,the effectiveness of the traditional,precise mathe-matical planning method is greatly reduced because it is time-consuming,costly,and impractical.To solve above problems,this paper proposes a multi-stage program optimization model based on a heterogeneous network and hybrid genetic algo-rithm and verifies the effectiveness and feasibility of the model and algorithm through an example.The results show that the hybrid algorithm proposed in this paper is better than the exist-ing meta-heuristic algorithm. 展开更多
关键词 program optimization heterogeneous network genetic algorithm portfolio selection.
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Solution for integer linear bilevel programming problems using orthogonal genetic algorithm 被引量:10
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作者 Hong Li Li Zhang Yongchang Jiao 《Journal of Systems Engineering and Electronics》 SCIE EI CSCD 2014年第3期443-451,共9页
An integer linear bilevel programming problem is firstly transformed into a binary linear bilevel programming problem, and then converted into a single-level binary implicit programming. An orthogonal genetic algorith... An integer linear bilevel programming problem is firstly transformed into a binary linear bilevel programming problem, and then converted into a single-level binary implicit programming. An orthogonal genetic algorithm is developed for solving the binary linear implicit programming problem based on the orthogonal design. The orthogonal design with the factor analysis, an experimental design method is applied to the genetic algorithm to make the algorithm more robust, statistical y sound and quickly convergent. A crossover operator formed by the orthogonal array and the factor analysis is presented. First, this crossover operator can generate a smal but representative sample of points as offspring. After al of the better genes of these offspring are selected, a best combination among these offspring is then generated. The simulation results show the effectiveness of the proposed algorithm. 展开更多
关键词 integer linear bilevel programming problem integer optimization genetic algorithm orthogonal experiment design
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Improved genetic algorithm for nonlinear programming problems 被引量:8
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作者 Kezong Tang Jingyu Yang +1 位作者 Haiyan Chen Shang Gao 《Journal of Systems Engineering and Electronics》 SCIE EI CSCD 2011年第3期540-546,共7页
An improved genetic algorithm(IGA) based on a novel selection strategy to handle nonlinear programming problems is proposed.Each individual in selection process is represented as a three-dimensional feature vector w... An improved genetic algorithm(IGA) based on a novel selection strategy to handle nonlinear programming problems is proposed.Each individual in selection process is represented as a three-dimensional feature vector which is composed of objective function value,the degree of constraints violations and the number of constraints violations.It is easy to distinguish excellent individuals from general individuals by using an individuals' feature vector.Additionally,a local search(LS) process is incorporated into selection operation so as to find feasible solutions located in the neighboring areas of some infeasible solutions.The combination of IGA and LS should offer the advantage of both the quality of solutions and diversity of solutions.Experimental results over a set of benchmark problems demonstrate that IGA has better performance than other algorithms. 展开更多
关键词 genetic algorithm(GA) nonlinear programming problem constraint handling non-dominated solution optimization problem.
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Application of numerical modeling and genetic programming to estimate rock mass modulus of deformation 被引量:6
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作者 Ebrahim Ghotbi Ravandi Reza Rahmannejad +1 位作者 Amir Ehsan Feili Monfared Esmaeil Ghotbi Ravandi 《International Journal of Mining Science and Technology》 SCIE EI 2013年第5期733-737,共5页
Estimation of the rock mass modulus of deformation(Em)is one of the most important design parameters in designing many structures in and on rock.This parameter can be obtained by in situ tests,empirical relations betw... Estimation of the rock mass modulus of deformation(Em)is one of the most important design parameters in designing many structures in and on rock.This parameter can be obtained by in situ tests,empirical relations between deformation modulus and rock mass classifcation,and estimating from laboratory tests results.In this paper,a back analysis calculation is performed to present an equation for estimation of the rock mass modulus of deformation using genetic programming(GP)and numerical modeling.A database of 40,960 datasets,including vertical stress(rz),horizontal to vertical stresses ratio(k),Poisson’s ratio(m),radius of circular tunnel(r)and wall displacement of circular tunnel on the horizontal diameter(d)for input parameters and modulus of deformation for output,was established.The selected parameters are easy to determine and rock mass modulus of deformation can be obtained from instrumentation data of any size circular galleries.The resulting RMSE of 0.86 and correlation coeffcient of97%of the proposed equation demonstrated the capability of the computer program(CP)generated by GP. 展开更多
关键词 Modulus of deformation(Em) DISPLACEMENT Numerical modeling genetic programming(GP) Back analysis
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Data-Driven Prediction of Sintering Burn-Through Point Based on Novel Genetic Programming 被引量:5
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作者 SHANG Xiu-qin LU Jian-gang SUN You-xian LIU Jun YING Yu-qian 《Journal of Iron and Steel Research International》 SCIE EI CAS CSCD 2010年第12期1-5,10,共6页
An empirical dynamic model of burn-through point(BTP)in sintering process was developed.The K-means clustering was used to feed distribution according to the cold bed permeability,which was estimated by the superfic... An empirical dynamic model of burn-through point(BTP)in sintering process was developed.The K-means clustering was used to feed distribution according to the cold bed permeability,which was estimated by the superficial gas velocity in the cold stage.For each clustering,a novel genetic programming(NGP)was proposed to construct the empirical model of the waste gas temperature and the bed pressure drop in the sintering stage.The least square method(LSM)and M-estimator were adopted in NGP to improve the ability to compute and resist disturbance.Simulation results show the superiority of the proposed method. 展开更多
关键词 burn-through point genetic programming K-means clustering
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Exponential distribution-based genetic algorithm for solving mixed-integer bilevel programming problems 被引量:4
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作者 Li Hecheng Wang Yuping 《Journal of Systems Engineering and Electronics》 SCIE EI CSCD 2008年第6期1157-1164,共8页
Two classes of mixed-integer nonlinear bilevel programming problems are discussed. One is that the follower's functions are separable with respect to the follower's variables, and the other is that the follower's f... Two classes of mixed-integer nonlinear bilevel programming problems are discussed. One is that the follower's functions are separable with respect to the follower's variables, and the other is that the follower's functions are convex if the follower's variables are not restricted to integers. A genetic algorithm based on an exponential distribution is proposed for the aforementioned problems. First, for each fixed leader's variable x, it is proved that the optimal solution y of the follower's mixed-integer programming can be obtained by solving associated relaxed problems, and according to the convexity of the functions involved, a simplified branch and bound approach is given to solve the follower's programming for the second class of problems. Furthermore, based on an exponential distribution with a parameter λ, a new crossover operator is designed in which the best individuals are used to generate better offspring of crossover. The simulation results illustrate that the proposed algorithm is efficient and robust. 展开更多
关键词 mixed-integer nonlinear bilevel programming genetic algorithm exponential distribution optimalsolutions
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Genetic Programming Approach for Predicting Surface Subsidence Induced by Mining 被引量:4
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作者 翟淑花 高谦 宋建国 《Journal of China University of Geosciences》 SCIE CSCD 2006年第4期361-366,共6页
The surface subsidence induced by mining is a complex problem, which is related with many complex and uncertain factors. Genetic programming (GP) has a good ability to deal with complex and nonlinear problems, there... The surface subsidence induced by mining is a complex problem, which is related with many complex and uncertain factors. Genetic programming (GP) has a good ability to deal with complex and nonlinear problems, therefore genetic programming approach is propesed to predict mining induced surface subsidence in this article. First genetic programming technique is introduced, second, surface subsidence genetic programming model is set up by selecting its main affective factors and training relating to practical engineering data, and finally, predictions are made by the testing of data, whose results show that the relative error is approximately less than 10%, which can meet the engineering needs, and therefore, this proposed approach is valid and applicable in predicting mining induced surface subsidence. The model offers a novel method to predict surface subsidence in mining. 展开更多
关键词 mining induced surface subsidence genetic programming parameters.
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Orthogonal genetic algorithm for solving quadratic bilevel programming problems 被引量:4
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作者 Hong Li Yongchang Jiao Li Zhang 《Journal of Systems Engineering and Electronics》 SCIE EI CSCD 2010年第5期763-770,共8页
A quadratic bilevel programming problem is transformed into a single level complementarity slackness problem by applying Karush-Kuhn-Tucker(KKT) conditions.To cope with the complementarity constraints,a binary encod... A quadratic bilevel programming problem is transformed into a single level complementarity slackness problem by applying Karush-Kuhn-Tucker(KKT) conditions.To cope with the complementarity constraints,a binary encoding scheme is adopted for KKT multipliers,and then the complementarity slackness problem is simplified to successive quadratic programming problems,which can be solved by many algorithms available.Based on 0-1 binary encoding,an orthogonal genetic algorithm,in which the orthogonal experimental design with both two-level orthogonal array and factor analysis is used as crossover operator,is proposed.Numerical experiments on 10 benchmark examples show that the orthogonal genetic algorithm can find global optimal solutions of quadratic bilevel programming problems with high accuracy in a small number of iterations. 展开更多
关键词 orthogonal genetic algorithm quadratic bilevel programming problem Karush-Kuhn-Tucker conditions orthogonal experimental design global optimal solution.
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Genetic programming for predictions of effectiveness of rolling dynamic compaction with dynamic cone penetrometer test results 被引量:3
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作者 R.A.T.M.Ranasinghe M.B.Jaksa +1 位作者 F.Pooya Nejad Y.L.Kuo 《Journal of Rock Mechanics and Geotechnical Engineering》 SCIE CSCD 2019年第4期815-823,共9页
Rolling dynamic compaction (RDC),which employs non-circular module towed behind a tractor,is an innovative soil compaction method that has proven to be successful in many ground improvement applications.RDC involves r... Rolling dynamic compaction (RDC),which employs non-circular module towed behind a tractor,is an innovative soil compaction method that has proven to be successful in many ground improvement applications.RDC involves repeatedly delivering high-energy impact blows onto the ground surface,which improves soil density and thus soil strength and stiffness.However,there exists a lack of methods to predict the effectiveness of RDC in different ground conditions,which has become a major obstacle to its adoption.For this,in this context,a prediction model is developed based on linear genetic programming (LGP),which is one of the common approaches in application of artificial intelligence for nonlinear forecasting.The model is based on in situ density-related data in terms of dynamic cone penetrometer (DCP) results obtained from several projects that have employed the 4-sided,8-t impact roller (BH-1300).It is shown that the model is accurate and reliable over a range of soil types.Furthermore,a series of parametric studies confirms its robustness in generalizing data.In addition,the results of the comparative study indicate that the optimal LGP model has a better predictive performance than the existing artificial neural network (ANN) model developed earlier by the authors. 展开更多
关键词 Ground improvement ROLLING DYNAMIC compaction (RDC) Linear genetic programming (LGP) DYNAMIC cone PENETROMETER (DCP) test
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Use Genetic Programming to Rank Web Images 被引量:2
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作者 Li Piji Ma Jun 《China Communications》 SCIE CSCD 2010年第1期80-92,共13页
Web image retrieval is a challenging task. One central problem of web image retrieval is to rank a set of images according to how well they meet the user information need. The problem of learning to rank has inspired ... Web image retrieval is a challenging task. One central problem of web image retrieval is to rank a set of images according to how well they meet the user information need. The problem of learning to rank has inspired numerous approaches to resolve it in the text information retrieval, related work for web image retrieval, however, are still limited. We focus on the problem of learning to rank images for web image retrieval, and propose a novel ranking model, which employs a genetic programming architecture to automatically generate an effective ranking function, by combining various types of evidences in web image retrieval, including text information, image visual content features, link structure analysis and temporal information. The experimental results show that the proposed algorithms are capable of learning effective ranking functions for web image retrieval. Significant improvement in relevancy obtained, in comparison to some other well-known ranking techniques, in terms of MAP, NDCG@n and D@n. 展开更多
关键词 web image RETRIEVAL learning to RANKING temporal information genetic programming results diversity
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Linear-in-Parameter Models Based on Parsimonious Genetic Programming Algorithm and Its Application to Aero-Engine Start Modeling 被引量:3
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作者 李应红 尉询楷 《Chinese Journal of Aeronautics》 SCIE EI CAS CSCD 2006年第4期295-303,共9页
A novel Parsimonious Genetic Programming (PGP) algorithm together with a novel aero-engine optimum data-driven dynamic start process model based on PGP is proposed. In application of this method, first, the traditio... A novel Parsimonious Genetic Programming (PGP) algorithm together with a novel aero-engine optimum data-driven dynamic start process model based on PGP is proposed. In application of this method, first, the traditional Genetic Programming(GP) is used to generate the nonlinear input-output models that are represented in a binary tree structure; then, the Orthogonal Least Squares algorithm (OLS) is used to estimate the contribution of the branches of the tree (refer to basic function term that cannot be decomposed anymore according to special rule) to the accuracy of the model, which contributes to eliminate complex redundant subtrees and enhance GP's convergence speed; and finally, a simple, reliable and exact linear-in-parameter nonlinear model via GP evolution is obtained. The real aero-engine start process test data simulation and the comparisons with Support Vector Machines (SVM) validate that the proposed method can generate more applicable, interpretable models and achieve comparable, even superior results to SVM. 展开更多
关键词 aerospace propulsion system linear-in-parameter nonlinear model Parsimonious genetic programming (PGP) aero-engine dynamic start model
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Prediction of Concrete Faced Rock Fill Dams Settlements Using Genetic Programming Algorithm 被引量:3
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作者 Seyed Morteza Marandi Seyed Mahmood VaeziNejad Elyas Khavari 《International Journal of Geosciences》 2012年第3期601-609,共9页
In the present study a Genetic Programing model (GP) proposed for the prediction of relative crest settlement of concrete faced rock fill dams. To this end information of 30 large dams constructed in seven countries a... In the present study a Genetic Programing model (GP) proposed for the prediction of relative crest settlement of concrete faced rock fill dams. To this end information of 30 large dams constructed in seven countries across the world is gathered with their reported settlements. The results showed that the GP model is able to estimate the dam settlement properly based on four properties, void ratio of dam’s body (e), height (H), vertical deformation modulus (Ev) and shape factor (Sc) of the dam. For verification of the model applicability, obtained results compared with other research methods such as Clements’s formula and the finite element model. The comparison showed that in all cases the GP model led to be more accurate than those of performed in literature. Also a proper compatibility between the GP model and the finite element model was perceived. 展开更多
关键词 CONCRETE FACED Rock-Fill DAMS SETTLEMENT genetic programming ALGORITHM Finite Element Model
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A High Precision Comprehensive Evaluation Method for Flood Disaster Loss Based on Improved Genetic Programming 被引量:2
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作者 ZHOU Yuliang LU Guihua +2 位作者 JIN Juliang TONG Fang ZHOU Ping 《Journal of Ocean University of China》 SCIE CAS 2006年第4期322-326,共5页
Precise comprehensive evaluation of flood disaster loss is significant for the prevention and mitigation of flood disasters. Here, one of the difficulties involved is how to establish a model capable of describing the... Precise comprehensive evaluation of flood disaster loss is significant for the prevention and mitigation of flood disasters. Here, one of the difficulties involved is how to establish a model capable of describing the complex relation between the input and output data of the system of flood disaster loss. Genetic programming (GP) solves problems by using ideas from genetic algorithm and generates computer programs automatically. In this study a new method named the evaluation of the grade of flood disaster loss (EGFD) on the basis of improved genetic programming (IGP) is presented (IGP-EGFD). The flood disaster area and the direct economic loss are taken as the evaluation indexes of flood disaster loss. Obviously that the larger the evaluation index value, the larger the corresponding value of the grade of flood disaster loss is. Consequently the IGP code is designed to make the value of the grade of flood disaster be an increasing function of the index value. The result of the application of the IGP-EGFD model to Henan Province shows that a good function expression can be obtained within a bigger searched function space; and the model is of high precision and considerable practical significance. Thus, IGP-EGFD can be widely used in automatic modeling and other evaluation systems. 展开更多
关键词 automatic modeling evaluation of flood disaster loss genetic algorithm genetic programming
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A predictive equation for residual strength using a hybrid of subset selection of maximum dissimilarity method with Pareto optimal multi-gene genetic programming 被引量:2
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作者 Hossien Riahi-Madvar Mahsa Gholami +1 位作者 Bahram Gharabaghi Seyed Morteza Seyedian 《Geoscience Frontiers》 SCIE CAS CSCD 2021年第5期342-354,共13页
More accurate and reliable estimation of residual strength friction angle(/r)of clay is crucial in many geotechnical engineering applications,including riverbank stability analysis,design,and assessment of earthen dam... More accurate and reliable estimation of residual strength friction angle(/r)of clay is crucial in many geotechnical engineering applications,including riverbank stability analysis,design,and assessment of earthen dam slope stabilities.However,a general predictive equation for/r,with applicability in a wide range of effective parameters,remains an important research gap.The goal of this study is to develop a more accurate equation for/r using the Pareto Optimal Multi-gene Genetic Programming(POMGGP)approach by evaluating a comprehensive dataset of 290 experiments compiled from published literature databases worldwide.A new framework for integrated equation derivation proposed that hybridizes the Subset Selection of Maximum Dissimilarity Method(SSMD)with Multi-gene Genetic Programming(MGP)and Pareto-optimality(PO)to find an accurate equation for/r with wide range applicability.The final predictive equation resulted from POMGGP modeling was assessed in comparison with some previously published machine learning-based equations using statistical error analysis criteria,Taylor diagram,revised discrepancy ratio(RDR),and scatter plots.Base on the results,the POMGGP has the lowest uncertainty with U95=2.25,when compared with Artificial Neural Network(ANN)(U95=2.3),Bayesian Regularization Neural Network(BRNN)(U95=2.94),Levenberg-Marquardt Neural Network(LMNN)(U95=3.3),and Differential Evolution Neural Network(DENN)(U95=2.37).The more reliable results in estimation of/r derived by POMGGP with reliability 59.3%,and resiliency 60%in comparison with ANN(reliability=30.23%,resiliency=28.33%),BRNN(reliability=10.47%,resiliency=10.39%),LMNN(reliability=19.77%,resiliency=20.29%)and DENN(reliability=27.91%,resiliency=24.19%).Besides the simplicity and ease of application of the new POMGGP equation to a broad range of conditions,using the uncertainty,reliability,and resilience analysis confirmed that the derived equation for/r significantly outperformed other existing machine learning methods,including the ANN,BRNN,LMNN,and DENN equations。 展开更多
关键词 Earth slopes Friction angle Maximum dissimilarity Multi-gene genetic programming PARETO-OPTIMALITY Residual strength
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Genetic Programming-based Self-reconfiguration Planning for Metamorphic Robot 被引量:1
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作者 Tarek Ababsa Noureddine Djedi Yves Duthen 《International Journal of Automation and computing》 EI CSCD 2018年第4期431-442,共12页
This paper presents a genetic programming based reconfiguration planner for metamorphic modular robots. Initially used for evolving computer programs that can solve simple problems, genetic programming (GP) has been... This paper presents a genetic programming based reconfiguration planner for metamorphic modular robots. Initially used for evolving computer programs that can solve simple problems, genetic programming (GP) has been recently used to handle various kinds of problems in the area of complex systems. This paper details how genetic programming can be used as an automatic programming tool for handling reconfiguration-planning problem. To do so, the GP evolves sequences of basic operations which are required for transforming the robot's geometric structure from its initial configuration into the target one while the total number of modules and their connectedness are preserved. The proposed planner is intended for both Crystalline and TeleCube modules which are achieved by cubical compressible units. The target pattern of the modular robot is expressed in quantitative terms of morphogens diffused on the environment. Our work presents a solution for self recontlguration problem with restricted and unrestricted free space available to the robot during reconfiguration, The planner outputs a near optimal explicit sequence of low-level actions that allows modules to move relative to each other in order to form the desired shape. 展开更多
关键词 Modular robots unit-compressible modules SELF-RECONFIGURATION genetic programming reconfiguration planning.
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Genetic Algorithm for Solving Quadratic Bilevel Programming Problem 被引量:1
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作者 WANG Guangmin WAN Zhongping +1 位作者 WANG Xianjiai FANG Debin 《Wuhan University Journal of Natural Sciences》 CAS 2007年第3期421-425,共5页
By applying Kuhn-Tucker condition the quadratic bilevel programming, a class of bilevel programming, is transformed into a single level programming problem, which can be simplified by some rule. So we can search the o... By applying Kuhn-Tucker condition the quadratic bilevel programming, a class of bilevel programming, is transformed into a single level programming problem, which can be simplified by some rule. So we can search the optimal solution in the feasible region, hence reduce greatly the searching space. Numerical experiments on several literature problems show that the new algorithm is both feasible and effective in practice. 展开更多
关键词 quadratic bilevel programming genetic algorithm optimal solution
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Hierarchical On-line Scheduling of Multiproduct Batch Plants with a Combined Approach of Mathematical Programming and Genetic Algorithm 被引量:1
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作者 陈理 王克峰 +1 位作者 徐霄羽 姚平经 《Chinese Journal of Chemical Engineering》 SCIE EI CAS CSCD 2004年第1期78-84,共7页
In this contribution we present an online scheduling algorithm for a real world multiproduct batch plant. The overall mixed integer nonlinear programming (MINLP) problem is hierarchically structured into a mixed integ... In this contribution we present an online scheduling algorithm for a real world multiproduct batch plant. The overall mixed integer nonlinear programming (MINLP) problem is hierarchically structured into a mixed integer linear programming (MILP) problem first and then a reduced dimensional MINLP problem, which are optimized by mathematical programming (MP) and genetic algorithm (GA) respectively. The basis idea relies on combining MP with GA to exploit their complementary capacity. The key features of the hierarchical model are explained and illustrated with some real world cases from the multiproduct batch plants. 展开更多
关键词 online scheduling multiproduct batch plant mixed integer nonlinear programming mathematical programming genetic algorithm
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Inference of General Mass Action-Based State Equations for Oscillatory Biochemical Reaction Systems Using <i>k</i>-Step Genetic Programming 被引量:1
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作者 Tatsuya Sekiguchi Hiroyuki Hamada Masahiro Okamoto 《Applied Mathematics》 2019年第8期627-645,共19页
Systems biology requires the development of algorithms that use omics data to infer interaction networks among biomolecules working within an organism. One major type of evolutionary algorithm, genetic programming (GP... Systems biology requires the development of algorithms that use omics data to infer interaction networks among biomolecules working within an organism. One major type of evolutionary algorithm, genetic programming (GP), is useful for its high heuristic ability as a search method for obtaining suitable solutions expressed as tree structures. However, because GP determines the values of parameters such as coefficients by random values, it is difficult to apply in the inference of state equations that describe oscillatory biochemical reaction systems with high nonlinearity. Accordingly, in this study, we propose a new GP procedure called “k-step GP” intended for inferring the state equations of oscillatory biochemical reaction systems. The k-step GP procedure consists of two algorithms: 1) Parameter optimization using the modified Powell method—after genetic operations such as crossover and mutation, the values of parameters such as coefficients are optimized by applying the modified Powell method with secondary convergence. 2) GP using divided learning data—to improve the inference efficiency, imposes perturbations through the addition of learning data at various intervals and adaptations to these changes result in state equations with higher fitness. We are confident that k-step GP is an algorithm that is particularly well suited to inferring state equations for oscillatory biochemical reaction systems and contributes to solving inverse problems in systems biology. 展开更多
关键词 SYSTEMS Biology genetic programming Inverse Problems OSCILLATORY BIOCHEMICAL Reaction SYSTEMS GMA-Based State Equations
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Efficient Graph-based Genetic Programming Representation with Multiple Outputs 被引量:1
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作者 Edgar Galvan-Lopez 《International Journal of Automation and computing》 EI 2008年第1期81-89,共9页
In this work, we explore and study the implication of having more than one output on a genetic programming (GP) graph-representation. This approach, called multiple interactive outputs in a single tree (MIOST), is... In this work, we explore and study the implication of having more than one output on a genetic programming (GP) graph-representation. This approach, called multiple interactive outputs in a single tree (MIOST), is based on two ideas. First, we defined an approach, called interactivity within an individual (IWI), which is based on a graph-GP representation. Second, we add to the individuals created with the IWI approach multiple outputs in their structures and as a result of this, we have MIOST. As a first step, we analyze the effects of IWI by using only mutations and analyze its implications (i.e., presence of neutrality). Then, we continue testing the effectiveness of IWI by allowing mutations and the standard GP crossover in the evolutionary process. Finally, we tested the effectiveness of MIOST by using mutations and crossover and conducted extensive empirical results on different evolvable problems of different complexity taken from the literature. The results reported in this paper indicate that the proposed approach has a better overall performance in terms of consistency reaching feasible solutions. 展开更多
关键词 Interactivity within an individual (IWI) multiple interactive outputs in a single tree (MIOST) NEUTRALITY evolvable hardware genetic programming (GP)
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