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Docking Studies on Binding Modes between the CatechoI-O-Methyltransferase and Catechol Derivatives for Antiparkinson Drug
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作者 Wassila Soufi Meriem Merad Faiza Boukli Fatima Lebbad Said Ghalem 《Journal of Chemistry and Chemical Engineering》 2014年第10期978-984,共7页
Inhibition of the enzyme COMT (catechol-O-methyltransferase) is an important approach in the treatment of Parkinson's disease. A series of potent catechols for COMT may give insight to develop new ways of antiparki... Inhibition of the enzyme COMT (catechol-O-methyltransferase) is an important approach in the treatment of Parkinson's disease. A series of potent catechols for COMT may give insight to develop new ways of antiparkinson drug. COMT inhibitors represent a new class of antiparkinson drugs, when they are coadministered with levodopa. Our goal of research is to study the inhibition of catechol-O-methyltransferase by molecular modeling methods. Different molecular modeling tools are used to perform this work (molecular mechanics, molecular dynamics and molecular docking (molegro virtnaldocker)). The results obtained from this work, into which the inhibition of catechol-O-methyltransferase by molecular modeling methods was elucidated, allow us to conclude that different catechols presents a more optimised inhibition of catechol-O-methyltransferase. The results suggest reducing the severity of Parkinson's disease. 展开更多
关键词 Parkinson's disease COMT CATECHOLS DFT (density functional theory) molecular docking molegro.
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小分子凝血酶抑制剂的分子设计与计算机模拟 被引量:3
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作者 翁羽 张莉娇 +1 位作者 陆群 吴坚 《中南药学》 CAS 2013年第8期565-568,共4页
目的设计5种小分子并研究其与凝血酶的对接,以研究新型凝血酶抑制剂。方法根据PPACK结构设计5种小分子凝血酶抑制剂,并通过autodock 4.2和MVD2010.4.0(molegro virtual docker)模拟这5种分子与凝血酶的对接。最后合成这5种分子,并测定... 目的设计5种小分子并研究其与凝血酶的对接,以研究新型凝血酶抑制剂。方法根据PPACK结构设计5种小分子凝血酶抑制剂,并通过autodock 4.2和MVD2010.4.0(molegro virtual docker)模拟这5种分子与凝血酶的对接。最后合成这5种分子,并测定凝血酶抑制剂的活性。结果 autodock对接数据显示分子1、2、5具有较高活性。MVD对接数据显示分子1、2、3具有较高活性。实验测定结果显示分子1、2、3、5均有一定活性。结论实验结果证明计算机模拟数据有一定的参考价值。 展开更多
关键词 分子对接 凝血酶抑制剂 抗凝多肽 AUTODOCK MVD
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Design, Synthesis and Characterization of Novel Sulfonamides Derivatives as Anticancer Agent Targeting EGFR TK, and Development of New Methods of Synthesis by Microwave Irradiation
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作者 Souad Akili Djamila Ben Hadda +2 位作者 Yaser Bitar Amir Balash Mustapha Fawaz Chehna 《International Journal of Organic Chemistry》 CAS 2021年第4期199-223,共25页
Some novel sulfonamide-derivatives were designed to develop novel kinase inhibitors. The molecular docking study was performed for the designed compounds against epidermal growth factor kinase receptor T790M/L858R (TM... Some novel sulfonamide-derivatives were designed to develop novel kinase inhibitors. The molecular docking study was performed for the designed compounds against epidermal growth factor kinase receptor T790M/L858R (TMLR) (PDB ID: 5EDQ) to identify new drug candidates for treating cancer. Binding free energy was calculated by Molegro virtual docker (MVD) to select the most promising hits. The corresponding docking score values into EGFR (TMLR) of 4b gave the best energy docking -147.213 Kcal/mol. And some of the designed sulfonamide derivatives have been synthesized by conventional method in addition to a microwave-assisted method of synthesis. The reaction of an amino group-containing drug;sulfamethoxazole and sulfanilamide with carbonyl group in benzoyl chloride and phthalic acid in basic media, generated a series of sulfonamide derivatives. The structures of all the synthesized compounds were well characterized by Mass spectrometry (MS), Infrared spectroscopy (IR), <sup><span style="font-family:Verdana;">1</sup><span style="font-family:Verdana;">H nuclear magnetic resonance (<sup><span style="font-family:Verdana;">1</sup><span style="font-family:Verdana;">H NMR), <sup><span style="font-family:Verdana;">13</sup><span style="font-family:Verdana;">C nuclear magnetic resonance (<sup><span style="font-family:Verdana;">13</sup><span style="font-family:Verdana;">C NMR) and elemental analysis. After obtaining experimental data regarding the yield and the time taken for the synthesis by both the approaches, conventional and microwave-assisted method, it was shown that the microwave-assisted method gave higher yield with shorter time and higher temperature compared to conventional heating methods. 展开更多
关键词 SULFONAMIDE Anticancer EGFR TMLR 5EDQ molegro Virtual Docker Sul-famethoxazole SULFANILAMIDE Microwave
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Computer-Aid Design of Novel Sulfonamide Derivatives as EGFR Kinase Inhibitors for Cancer Treatment
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作者 Souad Akili Djamila Ben Hadda +2 位作者 Yasser Bitar Abdulkarim Najjar Mustapha Fawaz Chehna 《International Journal of Organic Chemistry》 CAS 2021年第4期171-186,共16页
Several novel sulfonamide-derivatives were designed and studied their physicochemical properties to develop novel kinase inhibitors. Therefore, molecular docking was performed for the designed compounds against epider... Several novel sulfonamide-derivatives were designed and studied their physicochemical properties to develop novel kinase inhibitors. Therefore, molecular docking was performed for the designed compounds against epidermal growth factor receptor (PDB ID: 2ITY) to identify new drug candidates for treating cancer. Binding free energy was calculated by Molegro virtual docker (MVD) to select the most promising hits. The corresponding docking score values into EGFR of 4b gave the best energy docking —128.819 Kcal/mol. The identified hits can serve as starting points for further chemical synthesis and optimization to develop new potent anticancer agents. 展开更多
关键词 SULFONAMIDE ANTICANCER EGFR 2ITY KINASES Molecular Docking molegro Virtual Docker MVD MarvinSketch
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