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Importance of Molecular Method for Detection of Microorganisms in the Exploration of the Infectious Etiology of Male Infertility in Burkina Faso
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作者 Michel Kiréopori Gomgnimbou Louis Robert W. Belem +5 位作者 Armel Moumouni Sanou Claudel Fonessoubo Gbadjolbe Arnaud Quetin Sanou Kobo Gnada Azouman Da Etienne Bilgo 《Journal of Biosciences and Medicines》 2025年第1期272-283,共12页
In Burkina Faso, as in other African countries, infertility has become a social burden for the population and a public health problem. Male infertility accounts for 30% to 40% of all infertility cases. The diagnosis o... In Burkina Faso, as in other African countries, infertility has become a social burden for the population and a public health problem. Male infertility accounts for 30% to 40% of all infertility cases. The diagnosis of male infertility or hypofertility is often made by a simple laboratory analysis of sperm to explore sperm parameters. In most African countries, such as Burkina Faso, microbiological analysis in the context of sperm analysis is still not developed, and is carried out solely based on microscopy and traditional culture, which does not allow the growth of fragile and demanding bacteria. Our study investigated the microorganisms of sperm that may be involved in male infertility, using conventional bacteriology techniques and real-time PCR. However, it did not intend to perform a multivariate statistical association analysis to estimate the association of microorganisms with abnormal semen parameters. This prospective cross-sectional pilot study was carried out on patients who visited the bacteriology laboratory of Centre MURAZ, a research Institute in Burkina Faso, for male infertility diagnosis between 2 August and 31 August 2021. Bacteria were isolated and identified using standard bacteriology techniques. In parallel, common pathogenic microorganisms known to be associated with male infertility were targeted and detected in the sperm using a multiplex real-time PCR assay. A total of 38 sperm samples were analyzed by bacteriological culture and bacteria isolated were Staphylococcus aureus (S. aureus) 5.55%, Klebsiella pneumoniae (K. pneumoniae), Enterococcus faecalis (E. faecalis), Streptococcus agalactiae (S. agalactiae) and Staphylococcus hoemalyticus (S. hoemalyticus) respectively 2.70%. Real-time PCR targeted and detected Chlamydia trachomatis (C. trachomatis) at 7.89%, Ureaplasma urealyticum (U. urealyticum) at 21.05%, Ureaplasma parvum (U. parvum) at 18.42%, Mycoplasma hominis (M. hominis) at 15.79%, Mycoplasma genitalium (M. genitalium) at 10.53% and Trichomonas vaginalis (T. vaginalis) at 2.63%. Neisseria gonorrhoeae (N. gonorrhoeae) was targeted by the real-time PCR assay and was not detected (0%) in the tested semen samples. Our study highlights critical limitations of culture performance (low sensitivity), particularly in Burkina Faso, which has a total inability to detect microorganisms (fragile and demanding microorganisms) detected by PCR-based assays. There is therefore an urgent need to at least optimize culture, procedures and algorithms for detection of microorganisms associated with male infertility in clinical laboratories of Burkina Faso. The most effective solution is the routine implementation of molecular diagnostic methods. 展开更多
关键词 Male Infertility SPERM microorganisms CULTURE Molecular Diagnostic Burkina Faso
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Isolation and Identification of Rhizosphere Microorganisms and Endophytes in Pogostemon cablin
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作者 Lei HE Guanxian CHEN +1 位作者 Yonglong ZHANG Qingqing ZHI 《Plant Diseases and Pests》 2025年第2期24-28,共5页
[Objectives]To systematically investigate the microbial community composition of rhizosphere soil and endophytes associated with Pogostemon cablin,and to explore the relationships between endophytes and rhizosphere mi... [Objectives]To systematically investigate the microbial community composition of rhizosphere soil and endophytes associated with Pogostemon cablin,and to explore the relationships between endophytes and rhizosphere microorganisms as well as their potential applications.[Methods]Microbial isolates were obtained from rhizosphere soil,root tissues,and stem tissues using the serial dilution and spread plate method.These isolates were identified through morphological characterization,physiological and biochemical assays,and molecular biological techniques.[Results]A total of 18 microbial strains were isolated,including 7 bacterial and 11 fungal strains.Among the bacterial isolates,Pseudomonas spp.and Bacillus spp.were predominant,while the fungal isolates were mainly represented by Aspergillus spp.Certain bacterial strains,notably Pseudomonas spp.,exhibited potential abilities for indole-3-acetic acid(IAA)production,nitrogen fixation,and antagonistic activity against pathogenic microorganisms,suggesting their potential utility as biocontrol agents and promoters of plant growth.[Conclusions]This study establishes a foundational understanding of the microbial community characteristics in the rhizosphere and tissues of P.cablin,as well as their roles in plant growth and development. 展开更多
关键词 Pogostemon cablin RHIZOSPHERE MICROORGANISM ENDOPHYTE SEPARATION and IDENTIFICATION
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Evolution and health risk of indicator microorganisms in landscape water replenished by reclaimed water 被引量:1
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作者 Yitong Chen Chang Qi +3 位作者 Yanan Yu Xiaoxin Cao Xiang Zheng Rong Cheng 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2024年第12期186-197,共12页
As an important means to solve water shortage,reclaimed water has been widely used for landscape water supply.However,with the emergence of large-scale epidemic diseases such as SARS,avian influenza and COVID-19 in re... As an important means to solve water shortage,reclaimed water has been widely used for landscape water supply.However,with the emergence of large-scale epidemic diseases such as SARS,avian influenza and COVID-19 in recent years,people are increasingly concerned about the public health safety of reclaimed water discharged into landscape water,especially the pathogenic microorganisms in it.In this study,the water quality and microorganisms of the Old Summer Palace,a landscape water body with reclaimed water as the only replenishment water source,were tracked through long-term dynamic monitoring.And the health risks of indicator microorganisms were analyzed using Quantitative Microbial Risk Assessment(QMRA).It was found that the concentration of indicator microorganisms Enterococcus(ENT),Escherichia coli(EC)and Fecal coliform(FC)generally showed an upward trend along the direction of water flow and increased by more than 0.6 log at the end of the flow.The concentrations of indicator microorganisms were higher in summer and autumn than those in spring.And there was a positive correlation between the concentration of indicator microorganisms and COD.Further research suggested that increased concentration of indicator microorganisms also led to increased health risks,which were more than 30%higher in other areas of the park than the water inlet area and required special attention.In addition,(water)surface operation exposure pathway had much higher health risks than other pathways and people in related occupations were advised to take precautions to reduce the risks. 展开更多
关键词 Reclaimed water Landscape water The old summer palace Indicator microorganisms Pearson correlation analysis Redundancy analysis Health risk Quantitative microbial risk assessment(QMRA)
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Effect of salinization on soil properties and mechanisms beneficial to microorganisms in salinized soil remediation-a review 被引量:1
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作者 Jing Pan Xian Xue +6 位作者 CuiHua Huang QuanGang You PingLin Guo RuiQi Yang FuWen Da ZhenWei Duan Fei Peng 《Research in Cold and Arid Regions》 CSCD 2024年第3期121-128,共8页
Salinized soil is an important reserved arable land resource in China.The management and utilization of salinized soil can safeguard the current size of arable land and a stable grain yield.Salt accumulation will lead... Salinized soil is an important reserved arable land resource in China.The management and utilization of salinized soil can safeguard the current size of arable land and a stable grain yield.Salt accumulation will lead to the deterioration of soil properties,destroy soil production potential and damage soil ecological functions,which in turn will threaten global water and soil resources and food security,and affect sustainable socio-economic development.Microorganisms are important components of salinized soil.Microbial remediation is an important research tool in improving salinized soil and is key to realizing sustainable development of agriculture and the ecosystem.Knowledge about the impact of salinization on soil properties and measures using microorganisms in remediation of salinized soil has grown over time.However,the mechanisms governing these impacts and the ecological principles for microbial remediation are scarce.Thus,it is imperative to summarize the effects of salinization on soil physical,chemical,and microbial properties,and then review the related mechanisms of halophilic and halotolerant microorganisms in salinized soil remediation via direct and indirect pathways.The stability,persistence,and safety of the microbial remediation effect is also highlighted in this review to further promote the application of microbial remediation in salinized soil.The objective of this review is to provide reference and theoretical support for the improvement and utilization of salinized soil. 展开更多
关键词 Salinized soil Microbial remediation Halophilic and halotolerant microorganisms Soil properties
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Role of nosZ I-carrying microorganisms in regulating nitrous oxide reduction during forest conversion:A comparison of plantations and a secondary forest in subtropical soils 被引量:1
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作者 Milin DENG Guiping YE +7 位作者 Hang-Wei HU Chao XU Ping YANG Yong ZHENG Jupei SHEN Shengsheng JIN Ji-Zheng HE Yongxin LIN 《Pedosphere》 CSCD 2024年第6期1066-1075,共10页
The conversion of natural forests in subtropical regions to plantations or secondary forests has resulted in alterations in soil variables,microbial communities,and microbially mediated processes,including nitrous oxi... The conversion of natural forests in subtropical regions to plantations or secondary forests has resulted in alterations in soil variables,microbial communities,and microbially mediated processes,including nitrous oxide(N_(2)O)emissions.However,how forest conversion influences soil N_(2)O reduction and the abundance and community structure of N_(2)O-reducing microorganisms remains unclear.Here,we investigated the impact of converting natural forests to a secondary forest and Cunninghamia lanceolata and Pinus massoniana plantations on the abundance and community structure of N_(2)O-reducing microorganisms in both bulk soils and soil aggregates.Compared with the secondary forest,plantations had higher soil pH and available phosphorus and moisture contents,lower soil NH_(4)^(+)content,but similar aggregate sizes.Compared with the secondary forest,the conversion of natural forest to plantations resulted in significantly higher soil N_(2)O reduction rate and increased abundances of nosZⅠand nosZⅡgenes in bulk soils and soil aggregates.The abundance of nosZⅠwas higher than that of nosZⅡin all tested soils and had a stronger association with N_(2)O reduction rate,suggesting the greater role of nosZⅠ-carrying microorganisms in N_(2)O consumption.Forest conversion had a greater impact on the community composition of nosZ I than nosZⅡ,mainly by increasing the relative abundances of alpha-and beta-Proteobacteria,while decreasing gamma-Proteobacteria.However,nosZⅡ-carrying microorganisms were exclusively dominated by Gemmatimonadetes and less affected by forest conversion.Taken together,our findings significantly contribute to our understanding of the eco-physiological characteristics of N_(2)O-reducing microorganisms and highlight the importance of nosZⅠ-carrying microorganisms in N_(2)O consumption in subtropical forest soils. 展开更多
关键词 community composition community structure N_(2)O-reducing microorganisms soil aggregate subtropical forest
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Probiotic microorganisms affect the reproductive and nervous systems of male rats treated with acrylamide
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作者 Seyedhossein Hekmatimoghaddam Maryam Yadegari +2 位作者 Fateme Zare Fatemeh Zakizadeh Seyed Mohammad Seifati 《Asian pacific Journal of Reproduction》 CAS 2024年第4期178-186,共9页
Objective:To evaluate the protective effects of probiotic microorganisms on the reproductive and nervous systems of male rats treated with acrylamide.Methods:Thirty-two rats were randomly divided into 4 groups and rec... Objective:To evaluate the protective effects of probiotic microorganisms on the reproductive and nervous systems of male rats treated with acrylamide.Methods:Thirty-two rats were randomly divided into 4 groups and received normal saline through gavage(control),acrylamide 20 mg/kg body weight,acrylamide plus probiotic microorganisms(Lactobacillus acidophilus,Lactobacillus casei,Lactobacillus bulgaricus,Lactobacillus rhamnosus,Bifidobacterium breve,Bifidobacterium infantis,Streptococcus thermophilus and fructooligosaccharides,all mixed in sachets)20 or 200 mg/kg body weight,respectively.After 30 days,the testis,prostate,seminal vesicle and cerebellum were removed,fixed and stained with hematoxylin-eosin(H&E).The Johnsen score was used to classify spermatogenesis.Cavalieri's principle method was used to evaluate the total volume(in mm3)of the testes.The number of each intratubular cell type as well as intertubular Leydig cells in whole samples was measured using the physical dissector counting techniques.Stereological analysis and the grids were used to determine the volume of cerebellar layers as well as the Purkinje cell number.Results:The testis weight decreased significantly in the acrylamide-treated group compared to the other groups(P<0.001).The number of spermatogonia,spermatocytes,spermatids and Leydig cells in the acrylamide-treated group were significantly less compared to the control group(P<0.05),while they were increased significantly in the acrylamide+200 mg/kg probiotic group(P<0.05;P<0.01).The mean Johnsen score in the acrylamide-treated group was lower than in the control group(P<0.001).Acrylamide-induced changes including congestion,vacuolization in the secretory epithelial cells,and epithelial rupture were observed in the prostate and seminal vesicle.The volumes of cerebellar layers were decreased in the acrylamide group compared to the control group while recovered in both probiotic treated groups.Conclusions:Probiotic microorganisms alleviate acrylamide-induced toxicities against the reproductive and cerebellar tissues in rats. 展开更多
关键词 ACRYLAMIDE CEREBELLUM microorganisms PROBIOTICS Prostate Rats TESTIS
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Variations of phyllosphere microorganisms in asymptomatic and tobacco brown spot leaves before and after spraying 12% difenoconazole + fluxapyroxad SC
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作者 LI Tong WANG Hancheng +6 位作者 YE Guo WANG Qing NGANGUEM NZALLE Yranney Brice WANG Feng CAI Liuti FENG Ruichao ZHANG Songbai 《农药学学报》 CAS CSCD 北大核心 2024年第5期932-948,共17页
12%difenoconazole+fluxapyroxad SC(commercial name:Jiangong)was first released by BASF in China in 2016.It has been registered to control many diseases,including pear scab,apple Alternaria leaf spot,tomato early blight... 12%difenoconazole+fluxapyroxad SC(commercial name:Jiangong)was first released by BASF in China in 2016.It has been registered to control many diseases,including pear scab,apple Alternaria leaf spot,tomato early blight,cucumber powdery mildew,etc.This study evaluated the bioactivity of Jiangong against Alternaria alternata and explored variations of phyllosphere microorganisms in both asymptomatic and tobacco brown spot leaves at different persistence periods(0,5,10,and 15 days post-fungicide application)using high-throughput sequencing technology.The results indicated that Jiangong effectively inhibited mycelial growth(average EC_(50) value of 0.51μg/mL),conidia germination(average EC_(50) value of 3.47μg/mL),and the carbon metabolism of A.alternata.Both asymptomatic and symptomatic leaves presented complex microbial communities.Higher fungal diversity was noted in asymptomatic leaves,while higher bacterial diversity was found in symptomatic leaves.After application,the diversity and abundance of microbial community structures in both types of leaves changed over time.Fungal microbiome communities showed greater sensitivity than bacterial groups,with the microbiome communities of asymptomatic leaves being more affected than those of symptomatic leaves.Fungal community diversity decreased for both symptomatic and asymptomatic leaves after 5 days of application,while the diversity of fungal community in symptomatic leaves showed an upward trend after 10 days of application.Meanwhile,bacterial community diversity increased in both symptomatic and asymptomatic leaves after 5 days of application but then declined in asymptomatic leaves after 15 days.The abundance of the dominant function group of phyllosphere bacteria(metabolism,genetic information processing,environmental information processing)was not affected by the application of Jiangong.However,the abundance of the dominant function group of phyllosphere fungi(animal pathogen-endophyte-wood saprotroph,endophyte-plant pathogen,plant pathogen-undefined saprotroph)was significantly affected by the application of Jiangong,and high variation was found in symptomatic leaves than that of asymptomatic leaves.The application of Jiangong-induced alterations in the community structure of the tobacco phyllosphere microbiome provides a basis for future tobacco brown spot control strategies based on phyllospheric microecology. 展开更多
关键词 tobacco brown spot DIFENOCONAZOLE fluxapyroxad microorganism communities diversity high-throughput sequencing
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The Combination of Achnatherum inebrians Extracts and Soil Microorganisms Inhibited Seed Germination and Seedling Growth in Elymus nutans
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作者 Rui Zhang Taixiang Chen +4 位作者 Zhenjiang Chen Hao Chen Xuekai Wei Malik Kamran Chunjie Li 《Phyton-International Journal of Experimental Botany》 SCIE 2024年第3期567-580,共14页
In a greenhouse experiment,the effects of soil microorganisms and extracts of Achnatherum inebrians on the seed germination and seedling growth of Elymus nutans were studied.The results showed that both the extracts f... In a greenhouse experiment,the effects of soil microorganisms and extracts of Achnatherum inebrians on the seed germination and seedling growth of Elymus nutans were studied.The results showed that both the extracts from aboveground and belowground parts of A.inebrians significantly inhibited the germination rate,germination potential,germination index,vigor index,seedling height,root length,and fresh weight of E.nutans,but increased malondialdehyde content,catalase,peroxidase and superoxide dismutase activity of E.nutans seedlings(p<0.05).The allelopathy of aqueous extracts of the aboveground parts of A.inebrians was stronger than that of the pre-cipitates.Aqueous extracts of the aboveground parts of A.inebrians decreased seed germination rate,germination potential,germination index,vigor index,seedling length,root length,and seedling fresh weight by 10.45%-74.63%,24.18%-32.50%,19.03%-73.36%,37.83%-88.41%,21.42%-53.14%,2.65%-40.21%,and 20.45%-61.36%,respectively,and malondialdehyde content,peroxidase,catalase,and superoxide dismutase activity increased by 8.09%-62.24%,27.83%-86.47%,22.90%-93.17%,and 11.15%-75.91%,respectively.The above indexes were higher in live soil than in sterilized soil.Soil microorganisms increased the allelopathy of A.inebrians.The seed germination rate,germination potential,germination index,vigor index,seedling length,and seedling fresh weight of E.nutans planted in live soil decreased by 8.22%-48.48%,10.00%-51.85%,8.19%-53.26%,16.43%-60.03%,12.91%-28.81%,and 9.09%-22.86%compared with sterilized soil,respectively.Malondialdehyde content,peroxidase,catalase,and superoxide dismutase activity of E.nutans planted in live soil increased by 53.91%-81.06%,15.71%-57.34%,33.33%-86.31%,and 9.78%-52.51%compared with sterilized soil,respectively.The existence of soil microorganisms enhanced the allelopathy of the secondary metabolites of A.inebrians.A combination of microorganisms and aqueous extracts from the aboveground parts of A.inebrians had the strongest allelopathic effect on E.nutans. 展开更多
关键词 Achnatherum inebrians water immersion liquid aqueous leachate precipitate ALLELOPATHY Elymus nutans soil microorganisms
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Functions and Applications of Intestinal Symbiotic Microorganisms in Insects
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作者 Cong CHEN Junyu LIN +4 位作者 Zhaoyan LIN Qianrou LI Jingyi HUANG Qijing WU Qianhua JI 《Asian Agricultural Research》 2024年第8期23-28,共6页
Insects represent a diverse group of organisms on earth that carry a vast array of symbiotic microorganisms in their intestines.These microorganisms have established a complex and intimate symbiotic relationship with ... Insects represent a diverse group of organisms on earth that carry a vast array of symbiotic microorganisms in their intestines.These microorganisms have established a complex and intimate symbiotic relationship with their host insects over an extended period of evolutionary adaptation.The population structure of intestinal symbiotic microorganisms in insects exhibits a high degree of diversity,with notable differences among insect species.Conversely,within the same insect species,the population structure of symbiotic microorganisms in specific intestinal sites demonstrates a certain degree of stability and specificity.These symbiotic microorganisms perform various physiological functions in the host insect.Their biological functions encompass nutrient and material metabolism and immune and protective mechanisms,which have significant effects on host insect longevity,development,and reproductive capacity.These microorganisms have diverse applications,including pest control,bioenergy production,the development of insect resources,etc.Recent advancements in high-throughput sequencing technology have revealed a growing diversity and biological properties of these microorganisms.The application of these techniques has significantly contributed to the advancement of research in the field of insect intestinal microbial research,providing researchers with powerful tools for a deeper understanding and utilization of these symbiotic microorganisms.This study reviewed the research progress of insect intestinal microorganisms in three aspects:diversity,biological functions,and applications.The objective was to provide useful references and insights for further research and applications of insect intestinal microorganisms. 展开更多
关键词 SYMBIOTIC microorganisms INTESTINAL FLORA Population structure Diversity HIGH-THROUGHPUT sequencing
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Numerical Study on 3D MHD Darcy-Forchheimer Flow Caused by Gyrotactic Microorganisms of the Bio-Convective Casson Nanofluid across a Stretched Sheet
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作者 S.H.Elhag 《Frontiers in Heat and Mass Transfer》 EI 2024年第1期377-395,共19页
A review of the literature revealed that nanofluids are more effective in transferring heat than conventional fluids.Since there are significant gaps in the illumination of existing methods for enhancing heat transmis... A review of the literature revealed that nanofluids are more effective in transferring heat than conventional fluids.Since there are significant gaps in the illumination of existing methods for enhancing heat transmission in nanomaterials,a thorough investigation of the previously outlined models is essential.The goal of the ongoing study is to determine whether the microscopic gold particles that are involved in mass and heat transmission drift in freely.The current study examines heat and mass transfer on 3D MHD Darcy–Forchheimer flow of Casson nanofluid-induced bio-convection past a stretched sheet.The inclusion of the nanoparticles is a result of their peculiar properties,such as remarkable thermal conductivity,which are important in heat exchangers and cutting-edge nanotechnology.The gyrotactic microorganisms must be included to prevent the potential deposition of minute particles.The proposed flow dynamics model consists of an evolving nonlinear system of PDEs,which is subsequently reduced to a system of dimensionless ODEs utilizing similarity approximations.MATLAB software was utilized to create an effective code for the Runge-Kutta technique using a shooting tool to acquire numerical results.This method is extensively used to solve these issues since it is accurate to fourth order,efficient,and affordable.The influence of submerged factors on the velocity,temperature,concentration,and density of motile microorganisms is shown in the figures.Additionally,tables and bar charts are used to illustrate the physical characteristics of the Nusselt and Sherwood numbers for the densities of both nanoparticles and motile microorganisms.The dimensionless velocities are observed declining when the casson,magnetic,porosity,and forchheimer parameters grow,whereas the dimensionless temperature and concentration rise as the thermophoresis parameter rises.This work provides insights into practical applications such nanofluidic,energy conservation,friction reduction,and power generation.Furthermore,in a concentration field,the Brownian and thermophoresis parameters exhibit very distinct behaviours.However,the work makes a significant point that the flow of a Casson fluid including nanoparticles can be regulated by appropriately modifying the Casson parameter,thermophoresis parameter,and Brownian motion parameter. 展开更多
关键词 Casson fluid 3D stretching sheet convective conditions Darcy-Forchheimer Runge-Kutta-Fehlberg technique gyrotactic microorganisms
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Bioconvective Hybrid Flow with Microorganisms Migration and Buongiorno’s Model under Convective Condition
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作者 Azad Hussain Saira Raiz +2 位作者 Ali Hassan Mohamed R.Ali Abdulkafi Mohammed Saeed 《Frontiers in Heat and Mass Transfer》 EI 2024年第2期433-453,共21页
Heat transfer improves significantly when the working fluid has high thermal conductivity.Heat transfer can be found in fields such as food processing,solar through collectors,and drug delivery.Considering this notabl... Heat transfer improves significantly when the working fluid has high thermal conductivity.Heat transfer can be found in fields such as food processing,solar through collectors,and drug delivery.Considering this notable fact,this work is focused on investigating the bio-convection-enhanced heat transfer in the existence of convective boundary conditions in the flow of hybrid nanofluid across a stretching surface.Buongiorno fluid model with hybrid nanoparticles has been employed along the swimming microorganisms to investigate the mixture base working fluid.The developed nonlinear flow governing equations have been tackled numerically with the help of the bvp4c.The effects of relevant parameters on the flowdynamic have been portrayed in a graphical representation.The velocity profile decreases by raising the levels of buoyancy ratio and mixed convection in the range of 0.1<λ≤0.3.It has been discovered thatwhen bioconvection levels rise,motile microbemigration abruptly slows,which results in a decrease in fluid acceleration.The concentration of fluid flow declined for the Lewis number,but the opposite trend has been observed for the elastic parameter,thermophoresis parameter,and buoyancy ratio.With rising values of Brownian motion and thermophoretic diffusion,the surface drag and Nusselt number decrease significantly.Whereas,the opposite trend has been observed when the values of the thermal Biot number,Prandtl number and buoyancy ratio are enhanced.Additionally,data from this study have been validated by comparison with those that have previously been published,and an appropriate rate of agreement has been observed. 展开更多
关键词 Prandtl hybrid nanofluid mixed convection stretched sheet BIOCONVECTION motile microorganisms
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Identification of Microorganisms in Poultry Farms in N’djamena and the Border Areas of Hadjer-Lamis and Chari-Baguirmi Chad
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作者 Abakar Abbo Zakaria Bebanto Antipas Ban-Bo +2 位作者 Nadine Terei Bongo Naré Richard Gandolo Abdelsalam Adoum Doutoum 《Journal of Agricultural Chemistry and Environment》 2024年第2期223-234,共12页
Introduction: On the outskirts of Ndjamena, semi-industrial poultry farming and traditional poultry farming are practised informally on almost all poultry farms in Chad. This type of poultry farming is faced with real... Introduction: On the outskirts of Ndjamena, semi-industrial poultry farming and traditional poultry farming are practised informally on almost all poultry farms in Chad. This type of poultry farming is faced with real health problems attributable to a lack of monitoring of the vaccination schedule, inadequate compliance with biosecurity measures and poor application of the Ichikawa rule based on the 5 M’s. Objective: The aim of this article is to identify the microorganisms responsible for contamination of poultry farms in the study area. Method: The study was carried out from 28/04/2022 to 31/01/2023 on the basis of 300 samples taken from feed, drinking water, droppings and scrapings from poultry housing surfaces in the 30 farms that served as a framework for our research. Sampling was of the simple random type, and farms were selected on the basis of the farmers’ consent. The data were recorded on pre-established survey forms. Our study was cross-sectional, descriptive and prospective. Bacteria were isolated using the reference method NF EN ISO 6579 for Salmonella spp. and cultured on the specific medium eosin methylene blue (EMB) for Escherichia coli, Pseudomonas and Citrobacter freundii. Results: The following results emerged from this study: Escherichia coli (5.33%), Pseudomonas (1.33%), Citrobacter freundii (12%) and Salmonella paratyphi (21.68%). Conclusion: Of the 300 samples analysed, 121 (40.33%) were contaminated with pathogens. This high level of contamination is a health problem. The study shows that biosecurity is less satisfactory on the farms visited. Nevertheless, farms with a very satisfactory level of biosafety ensure food safety and variety for the population. 展开更多
关键词 microorganisms Identification Poultry Farms N’Djamena Hadjer-Lamis Chari-Baguirmi(Chad)
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Influence of Microorganisms Effective against Basal Rot and on Agronomic Parameters of Onion [Allium cepa L. (Amaryllidaceae)]
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作者 Henriette Doukahonon Guigui Bi Zaï Pacôme Zaouli +1 位作者 Alain Serge Coulibaly Juliette Ky Dedi 《Journal of Agricultural Chemistry and Environment》 2024年第3期282-299,共18页
Onions are a horticultural crop of great economic, dietary and medicinal importance, and are highly prized by the Ivorian population. However, production remains low, due to a number of constraints, including parasiti... Onions are a horticultural crop of great economic, dietary and medicinal importance, and are highly prized by the Ivorian population. However, production remains low, due to a number of constraints, including parasitic attacks. The most frequent is fusariosis caused by Fusarium sp., a pathogen that causes enormous damage to onion crops. Faced with these attacks, chemical control appears to be ineffective, with consequences for human health and the environment. This is why the search for effective alternative methods that respect the environment and human health is so necessary. It is in this context that this study was carried out, with the general aim of controlling fusarium wilt in onion crops, with a view to improving onion production in Ivory Coast through the use of effective microorganisms. The experimental set-up used for this purpose was a fisher block with complete randomization, comprising three replicates. A fungal spore concentration of 106 spore/mL of Fusarium sp., three doses (1%;2.5% and 5% v/v) of EM and one dose of a chemical fungicide (30 mL/16L) were tested on young onion plants. Each block consisted of nine sub-plots with nine treatments. Health parameters (incidence and severity) and agronomic parameters (growth and yield) were assessed. Microbiological analysis of the EM revealed the presence of nine morphotypes of Trichoderma sp., Aspergillus clavatus, Aspergillus flavus, Aspergillus sp., Penicillium sp., Rhizopus sp., lactic acid bacteria of the Bacillus family and the yeast Saccharomyces cerevisiae. Field experimentation showed that the 5% EM microbial solution reduced the incidence and severity of fusariosis compared with the chemical fungicide, and proved to be the best. This dose reduced yield losses by 7.14%, while improving onion growth and yield by over 5%. The results demonstrated the ability of the EM solution to effectively control the causal agent of basal rot in onion crops. 展开更多
关键词 Basal Rot Effective microorganisms (EM) Fusarium sp. ONION
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Effects of Biogas Slurry Application Years on Remediation of Pennisetum×sinese on Soil Physical and Chemical Properties and Microorganisms of Rare Earth Tailings
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作者 Shiyi FU Zhimei WANG +3 位作者 Wei LOU Zhiyong WU Sha LUO Guorong NI 《Agricultural Biotechnology》 2024年第6期22-27,33,共7页
[Objectives]This study was conducted to analyze the effects of continuous application of biogas slurry for many years on soil ecosystem restoration of rare earth tailings by planting Pennisetum×sinese,in order to... [Objectives]This study was conducted to analyze the effects of continuous application of biogas slurry for many years on soil ecosystem restoration of rare earth tailings by planting Pennisetum×sinese,in order to provide basis for scientific application of biogas slurry.[Methods]The fields with different years of continuous application of biogas slurry in Dingnan Rare Earth Tailings Ecological Restoration Demonstration Park were selected as the research object,and the differences in soil physical and chemical properties and microbial community structure after application of biogas slurry for different years(0,3 and 5 years)were studied.[Results]The bulk density of soil with continuous application of biogas slurry showed a downward trend,while the maximum water holding capacity,capillary water holding capacity,porosity,aeration,pH,organic matter,nitrogen,phosphorus and potassium,alkali-hydrolyzable nitrogen and available phosphorus showed an upward trend.Moreover,the effects achieved by application for 5 years were better than those by application for 3 years.Continuous application of biogas slurry could significantly improve the activity of soil urease,acid phosphatase,sucrase and cellulase,and it effects increased with the application year increasing.Continuous application of biogas slurry could significantly improve the abundance of dominant bacteria in soil,and with the increase of application years,the abundances of dominant bacteria also increased.[Conclusions]Continuous application of biogas slurry effectively improved soil physical and chemical properties and soil fertility in rare earth tailings areas where Pennisetum×sinese was planted to restore rare earth tailings.This study provides a theoretical support for establishing key ecological restoration technoiques. 展开更多
关键词 Biogas slurry Application period Rare earth tailings Soil physical and chemical properties Soil microorganism
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运动员的肠道菌群特征 被引量:1
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作者 张秋萍 徐倩 +4 位作者 田华君 褚羽丹 何俊良 马国强 邱俊 《中国组织工程研究》 CAS 北大核心 2025年第14期3051-3060,共10页
背景:了解运动员肠道菌群的特征及影响因素有助于确定相关运动项目的最佳肠道微生物组成,寻求提高运动表现和恢复的有效途径,并为个性化营养方案提供独特视角。目的:总结运动员的肠道菌群特征,从运动训练和饮食摄入两方面阐述影响运动... 背景:了解运动员肠道菌群的特征及影响因素有助于确定相关运动项目的最佳肠道微生物组成,寻求提高运动表现和恢复的有效途径,并为个性化营养方案提供独特视角。目的:总结运动员的肠道菌群特征,从运动训练和饮食摄入两方面阐述影响运动员肠道菌群特征的重要因素。方法:检索PubMed、ScienceDirect、中国知网、万方和维普数据库2004-2024年发表的文献,英文检索词为“microbiota,microbiome,athlete,exercise,training,diet,nutrition,dietary fiber,protein,ketogenic,fat”,中文检索词为“肠道菌群,肠道微生物,运动员,训练,比赛,饮食,营养”。排除研究质量较差及内容不相关的文献后,最终纳入65篇文献进行综述分析。结果与结论:①与普通人群相比,精英运动员的肠道菌群以α多样性增加、厚壁菌门/拟杆菌门比值升高、健康有益菌丰度增加、有助于运动表现的功能途径富集为主要特征;②项目类型和训练负荷与运动员肠道菌群物种结构及功能表达密切相关;③由代谢物介导的宿主与肠道微生物间的双向交流,是运动影响肠道菌群的重要机制;④阶段训练通常能够引发肠道微生物群产生适应性变化,并且菌群在结构或功能上的改变具有持续效应;⑤宏量营养素的种类、数量及组合形式能够显著影响肠道菌群结构和功能,并与运动训练发挥协同叠加或削弱抵消的作用;⑥未来应持续加强对运动员肠道菌群的相关探索,明确因果关系,建立运动训练干预新靶点。 展开更多
关键词 肠道菌群 运动员 运动 训练 饮食 肠道微生物 综述
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不同发酵工艺安化红茶的挥发性风味物质与微生物多样性分析 被引量:1
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作者 侯爱香 杨晓露 +4 位作者 吴文亮 肖愈 李适 黄义文 居荣芳 《茶叶科学》 北大核心 2025年第4期637-654,共18页
采用顶空固相微萃取-气相色谱-质谱联用(HS-SPME-GC-MS)技术、16 S rRNA和内在转录间隔区(ITS)高通量测序技术,探究了安化红茶的深发酵和浅发酵工艺过程中红茶的香气特征成分和微生物多样性。结果表明,在不同发酵工艺的安化红茶中共检测... 采用顶空固相微萃取-气相色谱-质谱联用(HS-SPME-GC-MS)技术、16 S rRNA和内在转录间隔区(ITS)高通量测序技术,探究了安化红茶的深发酵和浅发酵工艺过程中红茶的香气特征成分和微生物多样性。结果表明,在不同发酵工艺的安化红茶中共检测出82种挥发性成分,主要为醇类、酯类和醛类,占比约为85%;挥发性成分总量随着加工过程的进行呈现先增加后降低的趋势。以气味活度值(OAV)>1且变量投影重要性(VIP)>1为依据,在浅发酵与深发酵工艺的安化红茶中筛选出柠檬醛、芳樟醇、苯乙醇、苯乙醛、水杨酸甲酯、β-月桂烯等14种关键差异挥发性成分。安化红茶的优势细菌为鞘氨醇单胞菌属(Sphingomonas)、甲基杆菌属(Methylobacterium)、橙黄单胞菌属(Aureimonas),优势真菌为枝孢属(Cladosporium)、链格孢属(Alternaria)、Setophoma。橙黄单胞菌属、肠杆菌属(Enterobacter)、曲霉属(Aspergillus)、Pseudopithomyces与不同发酵过程显著相关。研究结果为安化红茶科学加工、风味解析提供理论参考与依据。 展开更多
关键词 红茶 工艺 发酵 挥发性成分 微生物
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功能微生物对花生根际土壤生物学肥力和养分利用的影响 被引量:1
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作者 司贤宗 张翔 +9 位作者 索炎炎 李亮 徐凤丹 李倩 闫萌 程培军 周彦忠 李飞 李南 王旭浩 《中国油料作物学报》 北大核心 2025年第2期443-449,共7页
为消减花生连作土壤障碍,服务花生优质高产,研究功能微生物对花生根际土壤生物学肥力和养分利用的影响。采用大田随机区组设计试验,研究了哈茨木霉菌、淡紫拟青霉菌、米曲霉3种真菌和枯草芽孢杆菌、地衣芽孢杆菌2种细菌对根际土壤微生... 为消减花生连作土壤障碍,服务花生优质高产,研究功能微生物对花生根际土壤生物学肥力和养分利用的影响。采用大田随机区组设计试验,研究了哈茨木霉菌、淡紫拟青霉菌、米曲霉3种真菌和枯草芽孢杆菌、地衣芽孢杆菌2种细菌对根际土壤微生物、酶活性、微生物碳、微生物氮、微生物磷和花生仁中养分、花生农艺性状及荚果产量的影响,旨在为砂姜黑土区夏花生科学施用微生物菌剂及发挥土壤生物肥力提供科学依据。结果表明,施用功能微生物增加了花生根际土壤中真菌、细菌的数量,降低放线菌数量;提高花生根际土壤中微生物量碳、微生物量氮、微生物量磷的含量;增加花生根际土壤中过氧化氢酶、磷酸酶、脲酶、蛋白酶、蔗糖酶的活性;提高花生仁中氮、磷、钾、锌的含量;增加花生主茎高、侧枝长、侧枝数、饱果数,降低秕果数;施用功能微生物的花生荚果产量增加252.5~480.4 kg/hm^(2),增产率为5.1%~9.6%,其中,施用真菌微生物的荚果产量比细菌微生物肥料平均增加153.9 kg/hm^(2),增产率为3.0%。本试验条件下,在氮(N)、磷(P2O5)、钾(K2O)施用量为120 kg/hm^(2)、90 kg/hm^(2)、120 kg/hm^(2)的基础上,施用功能微生物75 kg/hm^(2),花生荚果产量平均增加349.6 kg/hm^(2),增产率为7.0%,其中,施用哈茨木霉菌75 kg/hm^(2)的花生荚果产量最高,为5464.2 kg/hm^(2),可在夏花生主产区推广应用。 展开更多
关键词 花生 功能微生物 根际土壤生物学肥力 养分利用 产量
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湖泊铁硫循环微生物研究进展 被引量:1
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作者 袁媛 刘勇勤 《地球科学》 北大核心 2025年第3期887-907,共21页
湖泊作为内陆水体的重要组成部分,因将大气、岩石和水圈等联系起来而成为物质元素循环的关键作用场所.铁是地壳中含量排名第四的元素,普遍存在于各种矿物相中.硫以多种价态存在于多种无机和有机化合物中.湖泊中铁和硫在不同价态之间的... 湖泊作为内陆水体的重要组成部分,因将大气、岩石和水圈等联系起来而成为物质元素循环的关键作用场所.铁是地壳中含量排名第四的元素,普遍存在于各种矿物相中.硫以多种价态存在于多种无机和有机化合物中.湖泊中铁和硫在不同价态之间的相互转变和相互影响构成了湖泊铁硫循环过程,而微生物在其中发挥着主导作用,是循环中不可或缺的环节.本文总结了参与湖泊铁循环和硫循环的微生物类型、代谢途径及环境影响因子,特别聚焦于青藏高原湖泊铁硫循环相关微生物研究现状,并对未来青藏高原湖泊微生物驱动的铁硫循环研究方向进行了展望. 展开更多
关键词 湖泊 微生物 铁循环 硫循环 青藏高原
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病原微生物与菌群特征在预测和诊断化脓性扁桃体炎的价值研究 被引量:1
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作者 岳磊 刘云 +1 位作者 袁果 郭宾 《中国病原生物学杂志》 北大核心 2025年第4期455-459,共5页
目的探究病原微生物与菌群特征在预测和诊断化脓性扁桃体炎中的应用价值。方法选取148例疑似化脓性扁桃体炎患者,采集患者咽部分泌物,进行病原微生物的培养与鉴定,以综合诊断结果为判定标准,分为化脓性扁桃体炎组(n=67)和非化脓性扁桃... 目的探究病原微生物与菌群特征在预测和诊断化脓性扁桃体炎中的应用价值。方法选取148例疑似化脓性扁桃体炎患者,采集患者咽部分泌物,进行病原微生物的培养与鉴定,以综合诊断结果为判定标准,分为化脓性扁桃体炎组(n=67)和非化脓性扁桃体炎组(n=81),分析病原微生物与菌群特征在预测和诊断化脓性扁桃体炎中的临床价值。结果经高通量测序分析,化脓性扁桃体炎组患者菌群Ace指数、Chao指数、Shannon指数低于非化脓性扁桃体炎组,Simpson指数高于非化脓性扁桃体炎组(P<0.05);化脓性扁桃体炎组患者葡萄球菌属(χ^(2)=6.473,P=0.011)、嗜血杆菌属(χ^(2)=15.457,P<0.001)较非化脓性扁桃体炎组患者培养阳性率更高。化脓性扁桃体炎组患者流感嗜血杆菌、金黄色葡萄球菌、化脓性链球菌、EB病毒阳性检出率显著高于非化脓性扁桃体炎组(P<0.05);以综合检查为判断标准,病原微生物与菌群特征检查诊断化脓性扁桃体炎的Kappa值=0.692,AUC为0.889。经Logistic回归分析,血清白细胞计数(WBC)、血小板计数(PLT)、C-反应蛋白(CRP)、单核细胞百分数(MONO)、中性粒细胞百分数(NEUT)、淋巴细胞百分数(LYM)水平高表达是诊断化脓性扁桃体炎的独立预测因子(P<0.05)。结论临床中通过病原微生物检测及菌群多样性分析较为准确的区分化脓性扁桃体炎。 展开更多
关键词 化脓性扁桃体炎 病原微生物 菌群特征 诊断 预测
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有机肥和秸秆覆盖对黄土高原区山地果园土壤微生物群落结构及功能的影响 被引量:3
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作者 王琦 王媛媛 +3 位作者 李阳 田鑫 李夏媛 温云杰 《应用与环境生物学报》 北大核心 2025年第6期963-974,共12页
为促进黄土高原山地果园土壤肥力提升和健康发展,基于2016年开展的田间试验,设置化肥(CK)、化肥+有机肥(MC)和化肥+有机肥+秸秆覆盖(MG)3种培肥处理,分析土壤理化性质,采用Illumina Miseq测序技术分析微生物群落组成,利用KEGG数据库进... 为促进黄土高原山地果园土壤肥力提升和健康发展,基于2016年开展的田间试验,设置化肥(CK)、化肥+有机肥(MC)和化肥+有机肥+秸秆覆盖(MG)3种培肥处理,分析土壤理化性质,采用Illumina Miseq测序技术分析微生物群落组成,利用KEGG数据库进行基因功能注释.结果表明,与CK和MC处理相比,MG处理的土壤有机碳(SOC)、全氮(TN)、有效磷、速效钾含量以及含水量(SW)分别显著提高了3.3和1.0倍、2.4和1.1倍、3.4和1.9倍、2.9和1.5倍以及0.2和0.1倍,pH值降低了2.1%和1.0%;MG处理显著影响了土壤微生物群落结构,提升了细菌群落多样性,但是降低了真菌群落多样性;在门水平上,MG处理增加了Proteobacteria、Acidobacteria、Actinobacteria和Gemmatimonadetes细菌以及Mortierellomycota和Basidiomycota真菌的相对丰度,但降低了Bacteroidetes、Firmicutes细菌以及Ascomycota真菌的相对丰度;在属水平,MG处理增加了Nitrospira、Sphingomonas等细菌以及Mortierella真菌的相对丰度.冗余分析表明细菌群落结构主要受SW、SOC和pH值的影响,真菌群落结构主要受SOC和TN的影响.KEGG注释发现,MG处理提高了参与碳、氮等养分代谢和营腐类微生物的相对丰度,降低了病原真菌的相对丰度.本研究表明长期施用有机肥和秸秆覆盖可显著提高果园土壤养分含量,增加参与养分循环和有机质分解的微生物群落的相对丰度,促进土壤中养分的活化与释放. 展开更多
关键词 黄土高原 果园土壤 有机肥 秸秆覆盖 微生物
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