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Preliminary study on a quantification method and standardization for aquatic microbial loads based on microbial diversity absolute quantitative sequencing
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作者 Wen Li Jing Libin +4 位作者 Li Xiawei Lu Jing Jin Haowei Yang Yongqi Li Xueling 《China Standardization》 2026年第1期68-73,共6页
This study establishes and validates a method for the precise quantification of aquatic microbial loads using microbial diversity absolute quantitative sequencing.By adding synthetic spike-in DNA to water samples from... This study establishes and validates a method for the precise quantification of aquatic microbial loads using microbial diversity absolute quantitative sequencing.By adding synthetic spike-in DNA to water samples from the Dahei River prior to DNA extraction and 16S rRNA gene sequencing,it generates standard curves to convert sequencing data into absolute microbial copy numbers.The method,which is proved highly accurate(R^(2)>0.99),reveals a clear contrast between the river sites:the upstream community has not only a significantly higher total microbial load but also a completely different makeup of species compared to the downstream site.This approach effectively overcomes the limitations of relative abundance analysis,providing a powerful tool for environmental monitoring,and proposes key steps for future standardization to ensure data comparability and integration. 展开更多
关键词 absolute quantification microbial load 16S rRNA sequencing spike-in STANDARDIZATION aquatic microbes
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Advances in the isolation, cultivation, and identification of gut microbes
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作者 Meng-Qi Xu Fei Pan +1 位作者 Li-Hua Peng Yun-Sheng Yang 《Military Medical Research》 2025年第4期567-578,共12页
The gut microbiome is closely associated with human health and the development of diseases. Isolating, characterizing, and identifying gut microbes are crucial for research on the gut microbiome and essential for adva... The gut microbiome is closely associated with human health and the development of diseases. Isolating, characterizing, and identifying gut microbes are crucial for research on the gut microbiome and essential for advancing our understanding and utilization of it. Although culture-independent approaches have been developed, a pure culture is required for in-depth analysis of disease mechanisms and the development of biotherapy strategies. Currently, microbiome research faces the challenge of expanding the existing database of culturable gut microbiota and rapidly isolating target microorganisms. This review examines the advancements in gut microbe isolation and cultivation techniques, such as culturomics, droplet microfluidics, phenotypic and genomics selection, and membrane diffusion. Furthermore, we evaluate the progress made in technology for identifying gut microbes considering both non-targeted and targeted strategies. The focus of future research in gut microbial culturomics is expected to be on high-throughput, automation, and integration. Advancements in this field may facilitate strain-level investigation into the mechanisms underlying diseases related to gut microbiota. 展开更多
关键词 Gut microbes Culturomics microbial identification Droplet microfluidics Strain-level investigation
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Gut microbiota modulate intestinal inflammation by endoplasmic reticulum stress-autophagy-cell death signaling axis 被引量:1
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作者 Feiyang He Yi Zheng +5 位作者 Mabrouk Elsabagh Kewei Fan Xia Zha Bei Zhang Mengzhi Wang Hao Zhang 《Journal of Animal Science and Biotechnology》 2025年第4期1443-1460,共18页
The intestinal tract,a complex organ responsible for nutrient absorption and digestion,relies heavily on a balanced gut microbiome to maintain its integrity.Disruptions to this delicate microbial ecosystem can lead to... The intestinal tract,a complex organ responsible for nutrient absorption and digestion,relies heavily on a balanced gut microbiome to maintain its integrity.Disruptions to this delicate microbial ecosystem can lead to intestinal inflammation,a hallmark of inflammatory bowel disease(IBD).While the role of the gut microbiome in IBD is increasingly recognized,the underlying mechanisms,particularly those involving endoplasmic reticulum(ER)stress,autophagy,and cell death,remain incompletely understood.ER stress,a cellular response to various stressors,can trigger inflammation and cell death.Autophagy,a cellular degradation process,can either alleviate or exacerbate ER stress-induced inflammation,depending on the specific context.The gut microbiome can influence both ER stress and autophagy pathways,further complicating the interplay between these processes.This review delves into the intricate relationship between ER stress,autophagy,and the gut microbiome in the context of intestinal inflammation.By exploring the molecular mechanisms underlying these interactions,we aim to provide a comprehensive theoretical framework for developing novel therapeutic strategies for IBD.A deeper understanding of the ER stress-autophagy axis,the gut microbial-ER stress axis,and the gut microbial-autophagy axis may pave the way for targeted interventions to restore intestinal health and mitigate the impact of IBD. 展开更多
关键词 AUTOPHAGY Cell death Endoplasmic reticulum stress Gut microbes Intestinal inflammation
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Wetland types shape microbial function related to soil phosphorus cycling based on metagenomics analysis
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作者 Meiqing Jia Zhiwei Gao +7 位作者 Xuefeng Hu Mengqiong Feng Fanhui Liu Jing Huang Ruwen Zhang Jing Li Guogang Zhang Yidong Wang 《Journal of Environmental Sciences》 2025年第12期930-943,共14页
Limitations regarding phosphorus(P)are widespread in ecosystems.Understanding the impacts of the wetland types on microbially mediated soil P availability and cycling is essential for the effective management of wetla... Limitations regarding phosphorus(P)are widespread in ecosystems.Understanding the impacts of the wetland types on microbially mediated soil P availability and cycling is essential for the effective management of wetlands.In this study,the Beidagang wetland,Baodi paddy field,and Dahuangpu wetland in Tianjin,China were chosen as representatives of the coastal wetland(B),constructed wetland(R),and swampy wetland(W),respectively.Sequential P extraction and metagenomics approaches were adopted to explore the soil P fraction and microbially regulated P cycle.Proteobacteria were the predominant microbes-related soil P cycle.IMPA,gph,rsbU_P,ugpQ,and glpK genes were dominant in organic P(Po)mineralization,while gcd,ppa,and ppx genes were dominant in inorganic P(Pi)solubilization.The salinity,NO_(3)^(-)-N concentration,the ratio of total carbon to total nitrogen(TC/TN),total carbon(TC),and the ratio of soil organic carbon to total P(SOC/TP)were the co-drivers of microbially mediated P cycle processes.Microbial network complexity-relate P cycle was the lowest in the coastal wetland.Salinity and NO_(3)^(-)-N exhibited a significant negative relation to the abundance of most genes-relate Pi solubilization and a remarkable positive correlation with the abundance of many genes-relate Po mineralization.These findings demonstrated that Po mineralization tended to occur in habitats with high salinity and nutrient imbalances,whereas the dissolution of Pi was prone to occur in low-salinity environments with relatively balanced soil nutrients.This study improves understanding of how salinity and soil nutrients jointly shape microbial-regulated soil P cycle in different types of wetlands. 展开更多
关键词 METAGENOMICS Phosphorus fraction Functional genes WETLANDS microbes
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High-throughput sequencing unveils microbial succession patterns in restored Hulun Buir Sandy Land,northern China
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作者 PENG Tiantian HAO Haojing +5 位作者 GUAN Xiao LI Junsheng DIAO Zhaoyan BU He WO Qiang SONG Ni 《Journal of Arid Land》 2025年第9期1297-1313,共17页
In recent years,intensive human activities have increased the intensity of desertification,driving continual desertification process of peripheral meadows.To investigate the effects of restoration on soil microbial co... In recent years,intensive human activities have increased the intensity of desertification,driving continual desertification process of peripheral meadows.To investigate the effects of restoration on soil microbial communities,we analyzed vegetation-soil relationships in the Hulun Buir Sandy Land,northern China.Through the use of high-throughput sequencing,we examined the structure and diversity in the bacterial and fungal communities within the 0-20 cm soil layer after 9-15 a of restoration.Different slope positions were analyzed and spatial heterogeneity was assessed.The results showed progressive improvements in soil properties and vegetation with the increase of restoration duration,and the following order was as follows:bottom slope>middle slope>crest slope.During the restoration in the Hulun Buir Sandy Land,the bacterial communities were dominated by Proteobacteria,Actinobacteria,and Acidobacteria,whereas the fungal communities were dominated by Ascomycota and Basidiomycota.Eutrophic bacterial abundance increased with the restoration duration,whereas oligotrophic bacterial and fungal abundance levels decreased.The soil bacterial abundance significantly increased with the increasing restoration duration,whereas the fungal diversity decreased after 11 a of restoration,except that at the crest slope.Redundancy analysis showed that pH,soil moisture content,total nitrogen,and vegetation-related factors affected the bacterial community structure(45.43%of the total variance explained).Canonical correspondence analysis indicated that pH,total phosphorus,and vegetation-related factors shaped the bacterial community structure(31.82%of the total variance explained).Structural equation modeling highlighted greater bacterial responses(R^(2)=0.49-0.79)to changes in environmental factors than those of fungi(R^(2)=0.20-0.48).The soil bacterial community was driven mainly by pH,soil moisture content,electrical conductivity,plant coverage,and litter dry weight.The abundance and diversity of the soil fungal community were mainly driven by plant coverage,litter dry weight,and herbaceous aboveground biomass,while there was no significant correlation between the soil fungal community structure and environmental factors.These findings highlighted divergent microbial succession patterns and environmental sensitivities during sandy grassland restoration. 展开更多
关键词 REVEGETATION soil microbes high-throughput sequencing sandy grassland DUNES
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Engineered Microbes Tackle a Cocktail of Wastewater Pollutants
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作者 YAN Fusheng 《Bulletin of the Chinese Academy of Sciences》 2025年第2期111-113,共3页
As industrial pollution continues to contaminate ecosystems worldwide,researchers have engineered a breakthrough solution:a single bacterial strain that can tackle five persistent organic pollutants at once.
关键词 engineered microbes wastewater pollutants industrial pollution bacterial strain organic pollutants persistent organic pollutants
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Huayu Qutan formula(化瘀祛痰方)can improve platelet aggregationin acute coronary syndrome rats by regulating gut microbes to drivetrimethylamine/flavin containing monooxygenase 3/trimethylamineN-oxide pathway
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作者 ZHANG Ni CHEN Yanxi +2 位作者 JIA Lianqun LI Xinya MA Yixin 《Journal of Traditional Chinese Medicine》 2025年第4期747-758,共12页
OBJECTIVE:To investigate the effects of gut microbes regulation of the trimethylamine(TMA)/flavin containing monooxygenase 3(FMO3)/trimethylamine N-oxide(TMAO)pathway on platelet aggregation in acute coronary syndrome... OBJECTIVE:To investigate the effects of gut microbes regulation of the trimethylamine(TMA)/flavin containing monooxygenase 3(FMO3)/trimethylamine N-oxide(TMAO)pathway on platelet aggregation in acute coronary syndrome(ACS)rats and the intervention of Huayu Qutan formula(化瘀祛痰方).METHODS:The ACS rats with syndrome of phlegm and blood stasis rats were established.Platelet,platelet aggregation,platelet activation markers and TMA/FMO3/TMAO pathway were detected.Metagenomics technology was employed to analyze the characteristics of the gut microbiota.RESULTS:Huayu Qutan formula and gut microbes could inhibit high platelet reactivity and regulate the TMA/FMO3/TMAO pathway.The dominant bacteria in ACS rats including but not limited to the major phyla,Firmicutes,Bacteroidetes,Actinobacteria,and Proteobacteria,also including some low abundance phyla,Fusobacteria,Verrucomicrobia,Spirochaetes,and Deferribacteres.The dominant bacteria in the Huayu Qutan formula group were Synergistetes,Deferribacteres,Deferribacteraceae,Faecalibacterium and Mucispirillum.In the Huayu Qutan formula combined with fecal bacteria enema group,the dominant bacteria were Verrucomicrobia,Verrucomicrobiae,Akkermansia and Verrucomicrobium.These gut microbiota were correlated with pathways such as Riboflavin metabolism and Arachidonic acid metabolism.CONCLUSION:Huayu Qutan formula may prevent ACS by modulating gut microbes Synergistetes,Faecalibacterium and Allobaculum,regulating the iron metabolism of Deferribacteres,and driving the TMA/FMO3/TMAO pathway to regulate gut microbiota function,and improving platelet aggregation.Akkermansia may serve as a promising probiotic,which could drive TMA/FMO3/TMAO pathway to regulate Arachidonic acid metabolism to improve platelet aggregation.The findings of this study provide a theoretical basis for the theory of"the heart is connected with the small intestine". 展开更多
关键词 acute coronary syndrome platelet aggregation gut microbes Huayu Qutan formula
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Dynamic alterations in bacterial and fungal microbiome and inflammatory cytokines following SRV-8 infection in cynomolgus monkeys
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作者 Yun-Peng Yang Li-Bing Xu +3 位作者 Yong Lu Jing Wang Yan-Hong Nie Qiang Sun 《Zoological Research》 2025年第2期325-338,共14页
While viral infections can disturb the host gut microbiome,the dynamic alterations in microbial composition following infection remain poorly characterized.This study identified SRV-8-infected monkeys and classified t... While viral infections can disturb the host gut microbiome,the dynamic alterations in microbial composition following infection remain poorly characterized.This study identified SRV-8-infected monkeys and classified them into five groups based on infection progression.16S rRNA amplicon sequencing revealed significant alterations in the relative and inferred absolute abundance of bacterial genera UCG-002,Agathobacter,Coprococcus,and Holdemanella during the early stage of SRV-8 infection,coinciding with provirus formation.These microbial shifts were accompanied by functional modifications in bacterial communities at the same stage.In contrast,ITS amplicon sequencing indicated no significant differences in fungal composition between healthy wild-type and SRV-8-infected monkeys.Spearman correlation analyses demonstrated close interactions between intestinal bacteria and fungi following SRV-8 infection.Additionally,SRV-8 seropositive groups exhibited significantly elevated mRNA expression levels of pro-inflammatory(TNF-α,IFN-γ,IL-1β,and IL-6)and anti-inflammatory(IL-10)cytokine genes,highlighting close associations between inflammatory cytokines and immune responses.Overall,these findings provide a comprehensive characterization of bacterial and fungal microbiota dynamics and inflammatory cytokine responses associated with SRV-8 infection,clarifying the pathobiological mechanisms underlying SRV-8 infection from the perspective of the gut microbiome. 展开更多
关键词 Cynomolgus monkeys SRV-8 infection Dynamic alterations Bacterial and fungal microbes Inflammatory cytokines
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Research on the Jilin Oilfield Field Trials of Microbial Enhanced Oil Recovery 被引量:1
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作者 崔吉 张忠智 +3 位作者 宋绍富 李羡春 黄春霞 洪承燮 《Petroleum Science》 SCIE CAS CSCD 2004年第4期30-35,共6页
This paper describes the experience of Jilin oilfield trials for Microbial Enhanced Oil Recovery (MEOR). A new technique to identify microbes with DNA for MEOR has been established, and useful microbes selected f... This paper describes the experience of Jilin oilfield trials for Microbial Enhanced Oil Recovery (MEOR). A new technique to identify microbes with DNA for MEOR has been established, and useful microbes selected for use in field trials. Behaviors of bacteria activated in the reservoir, oil recovery and water cut, and the viscosity of crude oil produced through huff & puff testing and flooding with molasses-injection tests, have been investigated in situ. CJF-002, which produces biopolysaccharide, is the best among the microbes used for field trials, as it can use molasses as nutrient and produce a small quantity of CO2 and a mass of water-insoluble biopolymer. The metabolic behavior in the reservoir showed that CJF-002 had a good potentiality for MEOR. 展开更多
关键词 microbial enhanced oil recovery BIOPOLYMER TRACER huff & puff flooding with microbes
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The microbial content of unexpired pasteurized milk from selected supermarkets in a developing country 被引量:3
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作者 Melisa Anderson Patrice Hinds +3 位作者 Stacyann Hurditt Princena Miller Donovan McGrowder Ruby Alexander-Lindo 《Asian Pacific Journal of Tropical Biomedicine》 SCIE CAS 2011年第3期205-211,共7页
Objective:To determine the presence and levels of microbes in unexpired pasteurized milk from randomly selected supermarkets in Kingston,Jamaica.Methods:The quantitative study used a stratified random sampling techniq... Objective:To determine the presence and levels of microbes in unexpired pasteurized milk from randomly selected supermarkets in Kingston,Jamaica.Methods:The quantitative study used a stratified random sampling technique in the selection of the 20 representative milk samples from six(6) supermarkets.Microbiological tests such as methylene blue reduction,standard plate count(SPC),coliform plate count(CPC),purity plate culture,gram staining and biochemical tests were performed to examine the microbes in purchased unexpired pasteurized milk.Results:One sample(BCr016) had a pH of 4.0.a rancid odour and curdled appearance.It decolourized within one hour during the methylene blue reduction test and was classified as class 4 milk.Seven of the samples were sterile with no microbe growth on the plate count agar and violet red bile salt agar(VRBA).The milk samples that appeared to be safe for consumption were all 10,11,12 and 13 days before expiration.The VRBA sample BCr016,had a colony count of 13 400 CFU/ mL.There was the presence of Escherichia coli in sample LCr021 which had a standard plate count of 1 580 SPC/mL and a coliform count of 500 CFU/mL.Enterobacter sp.was present in colonies from BCr016 and all the other milk samples.Conclusions:Unacceptable levels of Entembacter spp.and Escherichia coli were found in most of the samples.Effective measures to ensure safe milk for human consumption such as the phosphatase test and methylene blue reduction test should be routinely performed on each batch of milk processed by dairy plants. 展开更多
关键词 microbIAL content Pasteurized MILK Supermarkets microbE microbIOLOGICAL test ESCHERICHIA coli ENTEROBACTER spp MILK Dairy plant Developing country
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Effect of Soil Drying Intensity During an Experimental Drying-Rewetting Event on Nutrient Transformation and Microbial Community Composition 被引量:3
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作者 SUN Dashend BI Qingfang +5 位作者 LI Kejie ZHU Jun ZHANG Qichun JIN Chongwei LU Lingli LIN Xianyong 《Pedosphere》 SCIE CAS CSCD 2018年第4期644-655,共12页
Soil drying-rewetting(DRW) events affect nutrient transformation and microbial community composition; however, little is known about the influence of drying intensity during the DRW events. Therefore, we analyzed soil... Soil drying-rewetting(DRW) events affect nutrient transformation and microbial community composition; however, little is known about the influence of drying intensity during the DRW events. Therefore, we analyzed soil nutrient composition and microbial communities with exposure to various drying intensities during an experimental drying-rewetting event, using a silt loam from a grassland of northern China, where the semi-arid climate exposes soils to a wide range of moisture conditions, and grasslands account for over 40% of the nation's land area. We also conducted a sterilization experiment to examine the contribution of soil microbes to nutrient pulses. Soil drying-rewetting decreased carbon(C) mineralization by 9%–27%. Both monosaccharide and mineral nitrogen(N) contents increased with higher drying intensities(drying to ≤ 10% gravimetric water content), with the increases being 204% and 110% with the highest drying intensity(drying to 2% gravimetric water content), respectively, whereas labile phosphorus(P)only increased(by 105%) with the highest drying intensity. Moreover, levels of microbial biomass C and N and dissolved organic N decreased with increasing drying intensity and were correlated with increases in dissolved organic C and mineral N, respectively,whereas the increases in labile P were not consistent with reductions in microbial biomass P. The sterilization experiment results indicated that microbes were primarily responsible for the C and N pulses, whereas non-microbial factors were the main contributors to the labile P pulses. Phospholipid fatty acid analysis indicated that soil microbes were highly resistant to drying-rewetting events and that drought-resistant groups were probably responsible for nutrient transformation. Therefore, the present study demonstrated that moderate soil drying during drying-rewetting events could improve the mineralization of N, but not P, and that different mechanisms were responsible for the C, N, and P pulses observed during drying-rewetting events. 展开更多
关键词 drought-resistant microbial groups gravimetric water content microbial biomass nutrient mineralization nutrient pulse soil microbes soil respiration
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Research Progress of Soil Microbiology 被引量:1
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作者 Lide WANG Tuo YAO +4 位作者 Chunxiu GUO Fugui HAN Fangling WANG Tao SUN Yinhua ZHANG 《Agricultural Science & Technology》 CAS 2015年第11期2367-2371,共5页
This paper aims at summarized the research progress of soil microbes,in amount of soil microbes including bacteria,fungi and actinomycetes,soil microbial biomass,including microbial biomass carbon,microbial biomass ni... This paper aims at summarized the research progress of soil microbes,in amount of soil microbes including bacteria,fungi and actinomycetes,soil microbial biomass,including microbial biomass carbon,microbial biomass nitrogen and microbial biomass phosphorus,function of microbial and screening and application of beneficial microorganisms etc.,and future research are discussed combined with our project team for many years of work. 展开更多
关键词 Soil microbiology Soil microbes microbial biomass Research progress
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Relationship between Microbial Activity and the Formation of Polymetallic Concretions in the Central Pacific Ocean 被引量:1
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作者 Yan Baorui Zhang Sheng Hu Dachun Institute of Hydrogeology and Engineering Geology, Chinese Academy of Geological Sciences, Zhengding, Hebei Liu Linqun 《Acta Geologica Sinica(English Edition)》 SCIE CAS CSCD 1992年第4期357-370,共14页
Using the concept of the interactive water rock- microbe system of ocean floor, the microbialmineralization of ocean-floor polymetallic concretions in the central Pacific Ocean has been studied for the firsttime. Thro... Using the concept of the interactive water rock- microbe system of ocean floor, the microbialmineralization of ocean-floor polymetallic concretions in the central Pacific Ocean has been studied for the firsttime. Through the correlation and study of the microbial activity and formation mechanism of polymetallicconcretions, the microbial and chemical processes for. transforming mineralizing materials and the observationand determination of the concentration of mineralizing material in the system and the variation ofenvironmental parameters, this paper reveals the reaction rate and evolutionary direction of mineralizing com-ponents caused by microbial activity, expounds the microbial mineralization mechanism and formation modelof polymetallic concretions from the angle of microbial geochemical action, and suggests a threefold division ofthe microbial mineralization stages 展开更多
关键词 Central Pacific water-rock-microbe system microbial minerogenesis element transformation rate microbial geochemica1 action
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Effects of Urbanization on the Quantity Changes of Microbes in Urban-to-rural Gradient Forest Soil 被引量:13
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作者 赵哲霞 郭恢财 《Agricultural Science & Technology》 CAS 2010年第3期118-122,共5页
Three typical rural-suburban-urban artificial wetlands Pinus elliottii forest in Nanchang City were selected as research objects to mensurate the soil nutrient content.And the annual average values and seasonal change... Three typical rural-suburban-urban artificial wetlands Pinus elliottii forest in Nanchang City were selected as research objects to mensurate the soil nutrient content.And the annual average values and seasonal changes of microbes in forest soil were analyzed.The results showed that soil bulk density,total phosphorus (TP) and pH increased,while soil organic carbon (SOC),total nitrogen (TN) declined with rural-to-urban gradient.At different eco-boundary,annual average values showed that actinomycetes quantity bacteria quantity fungi quantity.Total microbe number was urban suburb rural areas.The number of bacteria and fungi was urban suburbs rural areas,but the number of actinomycetes was suburb urban rural areas.Eco-boundary,season and microbes actinomycetes and fungi reached an extreme significant level (P 0.001).Bacteria in soil at different eco-boundary had significant effects,but season had no significant effect on bacteria.Eco-boundary and season had a very significant interaction on actinomycetes and fungi (P 0.001),but they had no significant interaction on bacteria (P 0.05).Eco-boundary showed significantly positive correlation with actinomycetes and fungi (P 0.001),but season had no significant corelation with microbes.In conclusion,urbanization process caused the physical-chemical properties changes of forest soil and affected the amount of soil microbes obviously. 展开更多
关键词 URBANIZATION Urban-to-rural gradient Amount of microbes
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Fecal microbiota transplantation broadening its application beyond intestinal disorders 被引量:70
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作者 Meng-Que Xu Hai-Long Cao +4 位作者 Wei-Qiang Wang Shan Wang Xiao-Cang Cao Fang Yan Bang-Mao Wang 《World Journal of Gastroenterology》 SCIE CAS 2015年第1期102-111,共10页
Intestinal dysbiosis is now known to be a complication in a myriad of diseases.Fecal microbiota transplantation(FMT),as a microbiota-target therapy,is arguably very effective for curing Clostridium difficile infection... Intestinal dysbiosis is now known to be a complication in a myriad of diseases.Fecal microbiota transplantation(FMT),as a microbiota-target therapy,is arguably very effective for curing Clostridium difficile infection and has good outcomes in other intestinal diseases.New insights have raised an interest in FMT for the management of extra-intestinal disorders associated with gut microbiota.This review shows that it is an exciting time in the burgeoning science of FMT application in previously unexpected areas,including metabolic diseases,neuropsychiatric disorders,autoimmune diseases,allergic disorders,and tumors.A randomized controlled trial was conducted on FMT in metabolic syndrome by infusing microbiota from lean donors or from self-collected feces,with the resultant findings showing that the lean donor feces group displayed increased insulin sensitivity,along with increased levels of butyrate-producing intestinal microbiota.Case reports of FMT have also shown favorable outcomes in Parkinson's disease,multiple sclerosis,myoclonus dystonia,chronic fatigue syndrome,and idiopathic thrombocytopenic purpura.FMT is a promising approach in the manipulation of the intestinal microbiota and has potential applications in a variety of extra-intestinal conditions associated with intestinal dysbiosis. 展开更多
关键词 FECAL microbIOTA TRANSPLANTATION INTESTINAL microb
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Effects of vegetation type on soil microbial community structure and catabolic diversity assessed by polyphasic methods in North China 被引量:63
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作者 HAN Xue-mei WANG Ren-qing +3 位作者 LIU Jian WANG Meng-cheng ZHOU Juan GUO Wei-hua 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2007年第10期1228-1234,共7页
Soil microbes play a major role in ecological processes and are closely associated with the aboveground plant community. In order to understand the effects of vegetation type on the characteristics of soil microbial c... Soil microbes play a major role in ecological processes and are closely associated with the aboveground plant community. In order to understand the effects of vegetation type on the characteristics of soil microbial communities, the soil microbial communities were assessed by plate counts, phospholipid fatty acid (PLFA) and Biolog microplate techniques in five plant communities, i.e., soybean field (SF), artificial turf (AT), artificial shrub (AS), natural shrub (NS), and maize field (MF) in Jinan, Shandong Province, North China. The results showed that plant diversity had little discernible effect on microbial biomass but a positive impact on the evenness of utilized substrates in Biolog microplate. Legumes could significantly enhance the number of cultural microorganisms, microbial biomass, and community catabolic diversity. Except for SF dominated by legumes, the biomass of fungi and the catabolic diversity of microbial community were higher in less disturbed soil beneath NS than in frequently disturbed soils beneath the other vegetation types. These results confirmed that high number of plant species, legumes, and natural vegetation types tend to support soil microbial communities with higher function. The present study also found a significant correlation between the number of cultured bacteria and catabolic diversity of the bacterial community. Different research methods led to varied results in this study. The combination of several approaches is recommended for accurately describing the characteristics of microbial communities in many respects. 展开更多
关键词 BIOLOG LEGUME microbial biomass plant diversity phospholipid fatty acid (PLFA) soil microbes
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Microbially induced deposition of barium phosphates and its ingredient,morphology and size under different pH values 被引量:1
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作者 於孝牛 钱春香 王欣 《Journal of Southeast University(English Edition)》 EI CAS 2015年第4期506-510,共5页
A phosphate-mineralization microbe was used to induce barium phosphates precipitation, and the precipitates with different types were obtained under different pH values. The average crystallite size of the barium phos... A phosphate-mineralization microbe was used to induce barium phosphates precipitation, and the precipitates with different types were obtained under different pH values. The average crystallite size of the barium phosphates was calculated by particle size distribution curves, and the size of the products was 33.40, 29. 37, 24. 13, 47.76 and 96. 53 μm when the pH values of the mixed solution are 7, 8, 9, 10 and 11, respectively. The results of X-ray diffraction (XRD) show that the structures of the particles controlled by the mixed solution are mainly BaaPO4 when pH 〈 10; the barium phosphates are synthesized by biological deposition which is the mixture of BaHPO4 and Ba5 (PO4)3OH when pH = 10; when pH = 11, the barium phosphates are also the mixtures, which are Ba5 (PO4)3OH and BaNaPO4. The above results indicate that the phosphate-mineralization microbe can produce a certain enzyme which constantly hydrolyzes phosphate monoester in the mixed solution, and then PO4^3- ions are obtained. 展开更多
关键词 phosphate-mineralization microbe bariumphosphates MORPHOLOGY X-ray diffraction phosphate monoester
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Soil-Plant-Microbe Interactions in Stressed Agriculture Management:A Review 被引量:30
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作者 Shobhit Raj VIMAL Jay Shankar SINGH +1 位作者 Naveen Kumar ARORA Surendra SINGH 《Pedosphere》 SCIE CAS CSCD 2017年第2期177-192,共16页
The expected rise in temperature and decreased precipitation owing to climate change and unabated anthropogenic activities add complexity and uncertainty to agro-industry. The impact of soil nutrient imbalance, misman... The expected rise in temperature and decreased precipitation owing to climate change and unabated anthropogenic activities add complexity and uncertainty to agro-industry. The impact of soil nutrient imbalance, mismanaged use of chemicals, high temperature, flood or drought, soil salinity, and heavy metal pollutions, with regard to food security, is increasingly being explored worldwide. This review describes the role of soil-plant-microbe interactions along with organic manure in solving stressed agriculture problems. Beneficial microbes associated with plants are known to stimulate plant growth and enhance plant resistance to biotic (diseases) and abiotic (salinity, drought, pollutions, etc.) stresses. The plant growth-promoting rhizobemteria (PGPR) and mycorrhizae, a key component of soil microbiota, could play vital roles in the maintenance of plant fitness and soil health under stressed environments. The application of organic manure as a soil conditioner to stressed soils along with suitable microbial strains could further enhance the plant-microbe associations and increase the crop yield. A combination of plant, stress-tolerant microbe, and organic amendment represents the tripartite association to offer a favourable environment to the proliferation of beneficial rhizosphere microbes that in turn enhance the plant growth performance in disturbed agro-ecosystem. Agriculture land use patterns with the proper exploitation of plant-microbe associations, with compatible beneficial microbial agents, could be one of the most effective strategies in the management of the concerned agriculture lands owing to climate change resilience. However, the association of such microbes with plants for stressed agriculture management still needs to be explored in greater depth. 展开更多
关键词 beneficial microbes FUNGI microbial agents rnycorrhiza organic manure PATHOGEN plant health plant growth-promoting rhizobacteria
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Exploration of the key microbes and composition stability of microbial consortium GF-20 with efficiently decomposes corn stover at low temperatures 被引量:6
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作者 YU Xiao-fang BORJIGIN Qinggeer +6 位作者 GAO Ju-lin WANG Zhi-gang HU Shu-ping BORJIGIN Naoganchaolu WANG Zhen SUN Ji-ying HAN Sheng-cai 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2019年第8期1893-1904,共12页
The microbial consortium GF-20(GF-20) can efficiently decompose corn stover at low temperatures. The present study explored the key microbes of GF-20 and evaluated different culture conditions on its composition stabi... The microbial consortium GF-20(GF-20) can efficiently decompose corn stover at low temperatures. The present study explored the key microbes of GF-20 and evaluated different culture conditions on its composition stability to promote the utilization of corn stover decomposing microbes in low temperature regions. GF-20 was subcultured to the 15 th generation under different temperatures, pHs, carbon, and nitrogen sources. Then, the dynamics of fermenting pH, cellulose enzyme activities, carbohydrate concentration, and oxidation reduction potential were determined to estimate the degradation efficiency of corn stover with GF-20. Furthermore, the structural stability and functional microbes of GF-20 were identified on the basis of PCR-denaturing gradient gel electrophoresis(DGGE) profiling and principal component analysis. The results showed that the offspring of GF-20 subcultured under different temperatures(4–30°C) and pH(6.0–9.0) conditions maintained stable growth, decomposition function, and composition structure. Furthermore, consortia GF-20 had a stable composition structure, which induced GF-20 to secrete cellulose and promote substrate decomposition as corn stover and ammonium were used as sources of carbon and nitrogen, respectively. According to the PCR-DGGE profiles, the key strains of GF-20 were determined to be Bacillus licheniformis, Cellvibrio mixtus subsp. mixtus, Bacillus tequilensis, Clostridium populeti, and Clostridium xylanolyticum. 展开更多
关键词 microbIAL CONSORTIUM DECOMPOSITION of CORN stalks low temperature functional microbE structure STABILITY
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Isolation,Screening and Identification of High-temperature Cellulolytic Microbes in Pig Manure 被引量:5
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作者 郭艳 张进良 Jin-liang 《Agricultural Science & Technology》 CAS 2010年第5期28-30,147,共4页
[Objective] The research aimed to lay the foundation for high-efficiency biological degradation microbial inoculums. [Method] under the 60℃ temperature the cellulolytic microbes in pig manure were isolated and determ... [Objective] The research aimed to lay the foundation for high-efficiency biological degradation microbial inoculums. [Method] under the 60℃ temperature the cellulolytic microbes in pig manure were isolated and determined the CMCase and Fpase,then proceeded the 16S rRNA gene analysis. [Result]The results showed that:BC1 and BC3 strains characterized higher carboxymethyl cellulose enzyme activity and higher filter paper activity,but their difference was small,then the 16S rDNA sequence of BC1 and BC3 strains were related to pseudomonas sp. (98% and 99% similarities,respectively).[Conclusion] the experiment laid foundation for high-efficiency biological heating agent. 展开更多
关键词 Pig manure High-temperature cellulolytic microbes 16S rRNA gene
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