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Bioinformatics and in vitro study reveal the roles of microRNA-346 in high glucose-induced human retinal pigment epithelial cell damage 被引量:1
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作者 Peng Li Li Wang +1 位作者 Qing Liu Zhao-Jiang Du 《International Journal of Ophthalmology(English edition)》 SCIE CAS 2023年第11期1756-1765,共10页
AIM:To study microRNAs(miRNAs)and their potential effects in high glucose-induced human retinal pigment epithelial cell damage.METHODS:We screened the GSE52233 miRNA expression dataset for differentially expressed miR... AIM:To study microRNAs(miRNAs)and their potential effects in high glucose-induced human retinal pigment epithelial cell damage.METHODS:We screened the GSE52233 miRNA expression dataset for differentially expressed miRNAs(DEMs).The target genes of the top 10 DEMs were predicted using miRWalk 2.0 database,followed by function enrichment and protein-protein interaction analysis.miRNA expression was determined in the human retinal pigment epithelial cell line ARPE-19 treated with high glucose(HG)by quantitative reverse transcription-polymerase chain reaction(qRT-PCR).Cell proliferation was determined using cell counting kit(CCK)-8 assay.Cell cycle,apoptosis,and reactive oxygen species(ROS)levels were determined by flow cytometry.The direct interaction between miRNA and targets was validated using dual-luciferase reporter assay.RESULTS:Thirty-nine DEMs were screened,and we predicted 125 miRNA-mRNA pairs for the top 10 DEMs,including 119 target genes of seven DEMs such as miR-346,which was upregulated in diabetic retinopathy(DR).miR-346 target genes were substantially enriched in the regulation of intracellular transport and retinoic acidinducible gene I(RIG-I)-like receptor signaling pathway.Expression of three upregulated and downregulated miRNAs were verified by qRT-PCR in HG-treated ARPE-19 cells.Expression of miR-346 was elevated in HG treated ARPE-19 cells in a dose-dependent manner.HG inhibited cell proliferation and induced apoptosis,which were partly reversed by transfecting an miR-346 inhibitor,which even decreased the ROS levels elevated due to HG.Argonaute 2(AGO2)was a target of miR-346.CONCLUSION:miR-346 is a key miRNA and plays an important role in HG-induced damage in human retinal pigment epithelial cells. 展开更多
关键词 MIRNA mirna-346 ARPE-19 bioinformatics analysis
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微小RNA-346与IDH基因野生型胶质瘤TRIM38基因表达和患者预后的关系
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作者 马坤 陈晓燕 +1 位作者 殷安安 田锐峰 《脑与神经疾病杂志》 CAS 2022年第11期670-674,共5页
目的探讨微小RNA(miR)-346与异柠檬酸脱氢酶(IDH)基因野生型胶质瘤中三基序蛋白质38(TRIM38)基因表达水平和患者总体生存期(OS)的关系。方法利用中国胶质瘤基因组图谱计划(CGGA)数据库的多组学分子数据,比较miR-346在胶质瘤中的表达改... 目的探讨微小RNA(miR)-346与异柠檬酸脱氢酶(IDH)基因野生型胶质瘤中三基序蛋白质38(TRIM38)基因表达水平和患者总体生存期(OS)的关系。方法利用中国胶质瘤基因组图谱计划(CGGA)数据库的多组学分子数据,比较miR-346在胶质瘤中的表达改变以及与TRIM38基因表达和患者OS的关系;采用细胞转染和双荧光素酶实验检测miR-346与TRIM38基因在胶质瘤细胞中的相互关系。结果共纳入CGGA中各级别胶质瘤样本198例及对照脑组织样本5例进行比较,发现miR-346表达水平随肿瘤级别的增加而降低(P<0.05),且IDH基因野生型肿瘤表达水平低于IDH基因突变型肿瘤(P<0.05)。Pearson相关性分析发现IH基因野生型胶质瘤中,miR-346与TRIM38基因表达之间呈显著负向相关性(P<0.05)。生存分析显示miR-346低表达组患者的OS与miR-346高表达组患者相比显著缩短(P=0.05),其预后指示能力独立于患者年龄及治疗方案等因素(~均P<0.05),但不独立于肿瘤级别(P>0.05)。细胞实验发现转染miR-346类似物可降低U251细胞中TRIM38基因的表达水平(P<0.05)。双荧光素酶实验证实miR-346与TRIM38存在特异性结合。结论miR346在IDH野生型胶质瘤样本中表达下降,且与患者的不良预后相关,这可能与其靶向调控促癌基因TRIM38表达有关。 展开更多
关键词 微小RNA-346 三基序蛋白质38基因 胶质瘤 异柠檬酸脱氢酶
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