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Neural networks and econometric models:Advancing brain connectivity for Alzheimer's drug development
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作者 Lorenzo Pini Paolo Pigato +1 位作者 Gloria Menegaz Ilaria Boscolo Galazzo 《Neural Regeneration Research》 2026年第7期2928-2929,共2页
Advances in Alzheimer's disease(AD)research have deepened our understanding,yet the mechanisms driving its progression remain unclear.Although a range of in vivo biomarkers is now available(e.g.,measurements of am... Advances in Alzheimer's disease(AD)research have deepened our understanding,yet the mechanisms driving its progression remain unclear.Although a range of in vivo biomarkers is now available(e.g.,measurements of amyloidbeta(Aβ)and ta u accumulation-the molecular hallmarks of AD-structural magnetic resonance imaging(MRI),assessments of brain metabolism,and,more recently,blood-based markers),a definitive diagnosis of AD continues to be challenging.For example,Frisoni et al. 展开更多
关键词 econometric models amyloidbeta alzheimers disease ad research drug development neural networks vivo biomarkers Alzheimers disease brain connectivity
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Transcranial direct current stimulation inhibits epileptic activity propagation in a large-scale brain network model 被引量:5
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作者 YU Ying FAN YuBo +2 位作者 HAN Fang LUAN GuoMing WANG QingYun 《Science China(Technological Sciences)》 SCIE EI CAS CSCD 2023年第12期3628-3638,共11页
Transcranial direct current stimulation(tDCS)is a noninvasive technique that uses constant,low-intensity direct current to regulate brain activities.Clinical studies have shown that cathode-tDCS(c-tDCS)is effective in... Transcranial direct current stimulation(tDCS)is a noninvasive technique that uses constant,low-intensity direct current to regulate brain activities.Clinical studies have shown that cathode-tDCS(c-tDCS)is effective in reducing seizure frequency in patients with epilepsy.Due to the heterogeneity and patient specificity of seizures,patient-specific epilepsy networks are increasingly important in exploring the regulatory role of c-tDCS.In this study,we first set the left hippocampus,parahippocampus,and amygdala as the epileptogenic zone(EZ),and the left inferior temporal cortex and ventral temporal cortex as the initial propagation zone(PZ)to establish a large-scale epilepsy network model.Then we set tDCS cathode locations according to the maximum average energy of the simulated EEG signals and systematically study c-tDCS inhibitory effects on the propagation of epileptic activity.The results show that c-tDCS is effective in suppressing the propagation of epileptic activity.Further,to consider the patient specificity,we set specific EZ and PZ according to the clinical diagnosis of 6 patients and establish patient-specific epileptic networks.We find that c-tDCS can suppress the propagation of abnormal activity in most patient-specific epileptic networks.However,when the PZ is widely distributed in both hemispheres,the treatment effect of c-tDCS is not satisfactory.Hence,we propose dual-cathode tDCS.For epilepsy models with a wide distribution of PZ,it can inhibit the propagation of epileptiform activity in other nodes except EZ and PZ without increasing the tDCS current strength.Our results provide theoretical support for the treatment of epilepsy with tDCS. 展开更多
关键词 EPILEPSY large-scale brain network modeling transcranial direct current stimulation neural mass model
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Irreversibility as a signature of non-equilibrium phase transition in large-scale human brain networks:An fMRI study
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作者 Jing Wang Kejian Wu +1 位作者 Jiaqi Dong Lianchun Yu 《Chinese Physics B》 2025年第5期636-644,共9页
It has been argued that the human brain,as an information-processing machine,operates near a phase transition point in a non-equilibrium state,where it violates detailed balance leading to entropy production.Thus,the ... It has been argued that the human brain,as an information-processing machine,operates near a phase transition point in a non-equilibrium state,where it violates detailed balance leading to entropy production.Thus,the assessment of irreversibility in brain networks can provide valuable insights into their non-equilibrium properties.In this study,we utilized an open-source whole-brain functional magnetic resonance imaging(fMRI)dataset from both resting and task states to evaluate the irreversibility of large-scale human brain networks.Our analysis revealed that the brain networks exhibited significant irreversibility,violating detailed balance,and generating entropy.Notably,both physical and cognitive tasks increased the extent of this violation compared to the resting state.Regardless of the state(rest or task),interactions between pairs of brain regions were the primary contributors to this irreversibility.Moreover,we observed that as global synchrony increased within brain networks,so did irreversibility.The first derivative of irreversibility with respect to synchronization peaked near the phase transition point,characterized by the moderate mean synchronization and maximized synchronization entropy of blood oxygenation level-dependent(BOLD)signals.These findings deepen our understanding of the non-equilibrium dynamics of large-scale brain networks,particularly in relation to their phase transition behaviors,and may have potential clinical applications for brain disorders. 展开更多
关键词 large-scale brain networks FMRI IRREVERSIBILITY non-equilibrium phase transition
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Functional modular organization unfolded by chimera-like dynamics in a large-scale brain network model 被引量:2
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作者 LIU ZiLu YU Ying WANG QingYun 《Science China(Technological Sciences)》 SCIE EI CAS CSCD 2022年第7期1435-1444,共10页
The brain is organized as a complex network architecture, which can be mapped into structural(SC) and functional connectivity(FC) by advanced neuroimaging techniques. Achievements in brain network research have reveal... The brain is organized as a complex network architecture, which can be mapped into structural(SC) and functional connectivity(FC) by advanced neuroimaging techniques. Achievements in brain network research have revealed that modularity is a universal trait in brain networks and may be vital for cognitive segregation and integration. Large-scale brain network modeling is a promising computational approach to combine neuroimaging data with generative rules for brain dynamics. Recently, it has been proposed that chimera states, a type of dynamics referring to the coexistence of coherent and incoherent participants, have traits in common with cognitive functions like segregated and integrated brain processing. Previous studies have reported the existence of chimera-like dynamics in large-scale brain network models, whereas they did not account for the relationship between chimeralike dynamics and corresponding functional modular organizations of the brain network. By specifying qualitatively different network dynamics in an anatomically-constrained brain network model, we compare the different modular organizations of FC unfolded by network dynamics. Our simulations reveal that chimera-like dynamics support a meaningful pattern of functional modular organization, which promotes a diversity of node roles with a distributed pattern of functional cartography. The distinct node roles in modular FC are also found to occur with a spatial preference in speciflc brain regions, and, to some extent, reflect the underlying structure constraints. Our results support the view that chimera-like dynamics is a functionally meaningful scenario that may play a fundamental role in the segregation and integration of brain functioning. 展开更多
关键词 large-scale brain network modular network SYNCHRONIZATION chimera state functional modularity
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Long Short-Term Memory Recurrent Neural Network-Based Acoustic Model Using Connectionist Temporal Classification on a Large-Scale Training Corpus 被引量:9
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作者 Donghyun Lee Minkyu Lim +4 位作者 Hosung Park Yoseb Kang Jeong-Sik Park Gil-Jin Jang Ji-Hwan Kim 《China Communications》 SCIE CSCD 2017年第9期23-31,共9页
A Long Short-Term Memory(LSTM) Recurrent Neural Network(RNN) has driven tremendous improvements on an acoustic model based on Gaussian Mixture Model(GMM). However, these models based on a hybrid method require a force... A Long Short-Term Memory(LSTM) Recurrent Neural Network(RNN) has driven tremendous improvements on an acoustic model based on Gaussian Mixture Model(GMM). However, these models based on a hybrid method require a forced aligned Hidden Markov Model(HMM) state sequence obtained from the GMM-based acoustic model. Therefore, it requires a long computation time for training both the GMM-based acoustic model and a deep learning-based acoustic model. In order to solve this problem, an acoustic model using CTC algorithm is proposed. CTC algorithm does not require the GMM-based acoustic model because it does not use the forced aligned HMM state sequence. However, previous works on a LSTM RNN-based acoustic model using CTC used a small-scale training corpus. In this paper, the LSTM RNN-based acoustic model using CTC is trained on a large-scale training corpus and its performance is evaluated. The implemented acoustic model has a performance of 6.18% and 15.01% in terms of Word Error Rate(WER) for clean speech and noisy speech, respectively. This is similar to a performance of the acoustic model based on the hybrid method. 展开更多
关键词 acoustic model connectionisttemporal classification large-scale trainingcorpus LONG SHORT-TERM memory recurrentneural network
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A Game-Theoretic Perspective on Resource Management for Large-Scale UAV Communication Networks 被引量:12
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作者 Jiaxin Chen Ping Chen +3 位作者 Qihui Wu Yuhua Xu Nan Qi Tao Fang 《China Communications》 SCIE CSCD 2021年第1期70-87,共18页
As a result of rapid development in electronics and communication technology,large-scale unmanned aerial vehicles(UAVs)are harnessed for various promising applications in a coordinated manner.Although it poses numerou... As a result of rapid development in electronics and communication technology,large-scale unmanned aerial vehicles(UAVs)are harnessed for various promising applications in a coordinated manner.Although it poses numerous advantages,resource management among various domains in large-scale UAV communication networks is the key challenge to be solved urgently.Specifically,due to the inherent requirements and future development trend,distributed resource management is suitable.In this article,we investigate the resource management problem for large-scale UAV communication networks from game-theoretic perspective which are exactly coincident with the distributed and autonomous manner.By exploring the inherent features,the distinctive challenges are discussed.Then,we explore several gametheoretic models that not only combat the challenges but also have broad application prospects.We provide the basics of each game-theoretic model and discuss the potential applications for resource management in large-scale UAV communication networks.Specifically,mean-field game,graphical game,Stackelberg game,coalition game and potential game are included.After that,we propose two innovative case studies to highlight the feasibility of such novel game-theoretic models.Finally,we give some future research directions to shed light on future opportunities and applications. 展开更多
关键词 large-scale UAV communication networks resource management game-theoretic model
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The enlightenment of artificial intelligence large-scale model on the research of intelligent eye diagnosis in traditional Chinese medicine 被引量:1
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作者 GAO Yuan WU Zixuan +4 位作者 SHENG Boyang ZHANG Fu CHENG Yong YAN Junfeng PENG Qinghua 《Digital Chinese Medicine》 CAS CSCD 2024年第2期101-107,共7页
Eye diagnosis is a method for inspecting systemic diseases and syndromes by observing the eyes.With the development of intelligent diagnosis in traditional Chinese medicine(TCM);artificial intelligence(AI)can improve ... Eye diagnosis is a method for inspecting systemic diseases and syndromes by observing the eyes.With the development of intelligent diagnosis in traditional Chinese medicine(TCM);artificial intelligence(AI)can improve the accuracy and efficiency of eye diagnosis.However;the research on intelligent eye diagnosis still faces many challenges;including the lack of standardized and precisely labeled data;multi-modal information analysis;and artificial in-telligence models for syndrome differentiation.The widespread application of AI models in medicine provides new insights and opportunities for the research of eye diagnosis intelli-gence.This study elaborates on the three key technologies of AI models in the intelligent ap-plication of TCM eye diagnosis;and explores the implications for the research of eye diagno-sis intelligence.First;a database concerning eye diagnosis was established based on self-su-pervised learning so as to solve the issues related to the lack of standardized and precisely la-beled data.Next;the cross-modal understanding and generation of deep neural network models to address the problem of lacking multi-modal information analysis.Last;the build-ing of data-driven models for eye diagnosis to tackle the issue of the absence of syndrome dif-ferentiation models.In summary;research on intelligent eye diagnosis has great potential to be applied the surge of AI model applications. 展开更多
关键词 Traditional Chinese medicine(TCM) Eye diagnosis Artificial intelligence(AI) large-scale model Self-supervised learning Deep neural network
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Research on Modeling Approach of Brain Function Network Based on Anatomical Distance
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作者 杨艳丽 郭浩 +1 位作者 陈俊杰 李海芳 《Journal of Shanghai Jiaotong university(Science)》 EI 2015年第6期758-762,共5页
The number of common neighbor between nodes is applied to the modeling of resting-state brain function network in order to analyze the effect of anatomical distance on the modeling of resting-state brain function netw... The number of common neighbor between nodes is applied to the modeling of resting-state brain function network in order to analyze the effect of anatomical distance on the modeling of resting-state brain function network. Three models based on anatomical distance, the number of common neighbor, or anatomical distance and the number of common neighbor are designed. Basing on residuals creates the evaluation criteria for selecting the optimal brain function model network in each class model. The model is selected to simulate the human real brain function network by comparison with real data functional magnetic resonance imaging(f MRI)network. Finally, the result shows that the best model only is based on anatomical distance. 展开更多
关键词 resting-state brain function network model network connection distance minimization topological property anatomical distance common neighbor
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Energy-Efficient Routing Algorithm Based on Multipath Routing in Large-Scale Networks
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作者 Haijun Geng Qidong Zhang +4 位作者 Jiangyuan Yao Wei Wang Zikun Jin Han Zhang Yangyang Zhang 《Computers, Materials & Continua》 SCIE EI 2021年第8期2029-2039,共11页
A reduction in network energy consumption and the establishment of green networks have become key scientific problems in academic and industrial research.Existing energy efficiency schemes are based on a known traffic... A reduction in network energy consumption and the establishment of green networks have become key scientific problems in academic and industrial research.Existing energy efficiency schemes are based on a known traffic matrix,and acquiring a real-time traffic matrix in current complex networks is difficult.Therefore,this research investigates how to reduce network energy consumption without a real-time traffic matrix.In particular,this paper proposes an intra-domain energy-efficient routing scheme based on multipath routing.It analyzes the relationship between routing availability and energy-efficient routing and integrates the two mechanisms to satisfy the requirements of availability and energy efficiency.The main research focus is as follows:(1)A link criticality model is evaluated to quantitatively measure the importance of links in a network.(2)On the basis of the link criticality model,this paper analyzes an energy-efficient routing technology based on multipath routing to achieve the goals of availability and energy efficiency simultaneously.(3)An energy-efficient routing algorithm based on multipath routing in large-scale networks is proposed.(4)The proposed method does not require a real-time traffic matrix in the network and is thus easy to apply in practice.(5)The proposed algorithm is verified in several network topologies.Experimental results show that the algorithm can not only reduce network energy consumption but can also ensure routing availability. 展开更多
关键词 Energy-efficient routing multipath routing link criticality model energy-saving ratio large-scale network
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Multi-layer Tectonic Model for Intraplate Deformation and Plastic-Flow Network in the Asian Continental Lithosphere 被引量:4
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作者 Wang Shengzu Institute of Geology, State Seismological Bureau, Beijing Liu Linqun 《Acta Geologica Sinica(English Edition)》 SCIE CAS CSCD 1993年第3期247-271,共25页
In a large area of the east—central Asian continent there is a unified seismic network system composed of two families of large—seismic belts that intersect conjugately. Such a seismic network in the middle—upper c... In a large area of the east—central Asian continent there is a unified seismic network system composed of two families of large—seismic belts that intersect conjugately. Such a seismic network in the middle—upper crust is actually a response to the plastic flow network in the lower lithosphere including the lower crust and lithospheric mantle. The existence of the unified plastic flow system confirms that the driving force for intraplate tectonic deformation results mainly from the compression of the India plate, while the long-range transmission of the force is carried out chiefly by means of plastic flow. The plastic flow network has a control over the intraplate tectonic deformation. 展开更多
关键词 Continental lithosphere tectonic deformation multi-layer tectonic model large-scale seismic belt seismic network plastic flow network
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Brain Encoding and Decoding in fMRI with Bidirectional Deep Generative Models 被引量:2
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作者 Changde Du Jinpeng Li +1 位作者 Lijie Huang Huiguang He 《Engineering》 SCIE EI 2019年第5期948-953,共6页
Brain encoding and decoding via functional magnetic resonance imaging(fMRI)are two important aspects of visual perception neuroscience.Although previous researchers have made significant advances in brain encoding and... Brain encoding and decoding via functional magnetic resonance imaging(fMRI)are two important aspects of visual perception neuroscience.Although previous researchers have made significant advances in brain encoding and decoding models,existing methods still require improvement using advanced machine learning techniques.For example,traditional methods usually build the encoding and decoding models separately,and are prone to overfitting on a small dataset.In fact,effectively unifying the encoding and decoding procedures may allow for more accurate predictions.In this paper,we first review the existing encoding and decoding methods and discuss the potential advantages of a“bidirectional”modeling strategy.Next,we show that there are correspondences between deep neural networks and human visual streams in terms of the architecture and computational rules.Furthermore,deep generative models(e.g.,variational autoencoders(VAEs)and generative adversarial networks(GANs))have produced promising results in studies on brain encoding and decoding.Finally,we propose that the dual learning method,which was originally designed for machine translation tasks,could help to improve the performance of encoding and decoding models by leveraging large-scale unpaired data. 展开更多
关键词 brain encoding and DECODING Functional magnetic resonance imaging DEEP neural networks DEEP GENERATIVE models Dual learning
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Epileptic brain network mechanisms and neuroimaging techniques for the brain network 被引量:1
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作者 Yi Guo Zhonghua Lin +1 位作者 Zhen Fan Xin Tian 《Neural Regeneration Research》 SCIE CAS CSCD 2024年第12期2637-2648,共12页
Epilepsy can be defined as a dysfunction of the brain network,and each type of epilepsy involves different brain-network changes that are implicated diffe rently in the control and propagation of interictal or ictal d... Epilepsy can be defined as a dysfunction of the brain network,and each type of epilepsy involves different brain-network changes that are implicated diffe rently in the control and propagation of interictal or ictal discharges.Gaining more detailed information on brain network alterations can help us to further understand the mechanisms of epilepsy and pave the way for brain network-based precise therapeutic approaches in clinical practice.An increasing number of advanced neuroimaging techniques and electrophysiological techniques such as diffusion tensor imaging-based fiber tra ctography,diffusion kurtosis imaging-based fiber tractography,fiber ball imagingbased tra ctography,electroencephalography,functional magnetic resonance imaging,magnetoencephalography,positron emission tomography,molecular imaging,and functional ultrasound imaging have been extensively used to delineate epileptic networks.In this review,we summarize the relevant neuroimaging and neuroelectrophysiological techniques for assessing structural and functional brain networks in patients with epilepsy,and extensively analyze the imaging mechanisms,advantages,limitations,and clinical application ranges of each technique.A greater focus on emerging advanced technologies,new data analysis software,a combination of multiple techniques,and the construction of personalized virtual epilepsy models can provide a theoretical basis to better understand the brain network mechanisms of epilepsy and make surgical decisions. 展开更多
关键词 electrophysiological techniques EPILEPSY functional brain network functional magnetic resonance imaging functional near-infrared spectroscopy machine leaning molecular imaging neuroimaging techniques structural brain network virtual epileptic models
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Studies in Brain Functional Networks Based on Complex Networks
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作者 Bin Nie Jinchi Zhang +2 位作者 Lanhua Zhang Yujuan Li Shaowei Xue 《Journal of Control Science and Engineering》 2014年第1期28-34,共7页
The purpose of the paper is to provide a way to model the brain functional network based on the complex networks with brain anatomical architecture. We introduce the brain structural and functional researches, and del... The purpose of the paper is to provide a way to model the brain functional network based on the complex networks with brain anatomical architecture. We introduce the brain structural and functional researches, and delineate the brain anatomical and functional networks based on complex networks, then we discuss the brain functional complex network models; at last we put forward the brain functional networks modeling process and the data processing with fMRI (functional magnetic resonance imaging) in detailed. 展开更多
关键词 Complex network brain functional network NEURON modeling.
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不同类型元认知反思的特异性与协同神经机制:一个整合性理论模型
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作者 岳丽明 刘振南 高湘萍 《心理科学进展》 北大核心 2026年第3期487-498,共12页
元认知反思是自主学习和高阶思维发展的核心机制,其神经基础已成为认知神经科学与教育科学交叉领域的重要议题。然而,现有研究尚缺乏能够系统解释不同类型反思的神经特异性及其网络协同机制的统一框架。本文首先梳理了元认知反思的核心... 元认知反思是自主学习和高阶思维发展的核心机制,其神经基础已成为认知神经科学与教育科学交叉领域的重要议题。然而,现有研究尚缺乏能够系统解释不同类型反思的神经特异性及其网络协同机制的统一框架。本文首先梳理了元认知反思的核心成分,并提出一个前瞻/回溯与即时/延迟相结合的二维分类框架。在此基础上,系统回顾了前额叶、顶叶和扣带回三大关键脑区的功能证据,并总结其在不同类型反思中的作用。通过整合空间网络与时间动态的研究成果,本文进一步提出特异性-协同模型,强调大规模脑网络的动态交互既体现不同类型元认知反思监控的神经通路特异性,也揭示跨网络的协同规律。最后,文章展望了未来在动态网络建模、生态效度提升和个体化干预等方向的研究前景,旨在为元认知反思的机制研究提供统一的理论框架,并为教育实践中的反思性学习提供新的神经科学视角。 展开更多
关键词 元认知反思 神经机制 大规模脑网络 时空整合 特异性-协同模型
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睡眠剥夺影响风险决策的大尺度脑网络模型
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作者 陈星 郭博文 +2 位作者 闫凯凯 毛天欣 饶恒毅 《心理科学》 北大核心 2026年第1期68-81,共14页
随着科技发展,睡眠不足问题日益普遍,这会显著损害个体的认知和情绪功能。风险决策在生活中无处不在,并受到睡眠不足的影响。近年来,越来越多研究开始探讨睡眠剥夺对风险决策的影响,但大多关注不同程度睡眠剥夺对特定脑区和单一脑网络... 随着科技发展,睡眠不足问题日益普遍,这会显著损害个体的认知和情绪功能。风险决策在生活中无处不在,并受到睡眠不足的影响。近年来,越来越多研究开始探讨睡眠剥夺对风险决策的影响,但大多关注不同程度睡眠剥夺对特定脑区和单一脑网络激活水平的影响,忽略了大尺度脑网络的整体作用。研究比较了完全睡眠剥夺和部分睡眠剥夺对风险决策的影响,并分别从大尺度脑网络视角分析其作用机制。研究强调了中央执行网络、奖赏网络和凸显网络在这一过程中的执行控制、奖惩预期和风险评估作用,共同决定个体的决策表现。最后,本文讨论了未来研究可以从建立神经计算模型、探究动态影响等方面继续探究。 展开更多
关键词 完全睡眠剥夺 部分睡眠剥夺 风险决策 大尺度脑网络模型
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On developing data-driven turbulence model for DG solution of RANS 被引量:11
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作者 Liang SUN Wei AN +1 位作者 Xuejun LIU Hongqiang LYU 《Chinese Journal of Aeronautics》 SCIE EI CAS CSCD 2019年第8期1869-1884,共16页
High-order Discontinuous Galerkin(DG) methods have been receiving more and more attentions in the area of Computational Fluid Dynamics(CFD) because of their high-accuracy property. However, it is still a challenge to ... High-order Discontinuous Galerkin(DG) methods have been receiving more and more attentions in the area of Computational Fluid Dynamics(CFD) because of their high-accuracy property. However, it is still a challenge to obtain converged solution rapidly when solving the Reynolds Averaged Navier–Stokes(RANS) equations since the turbulence models significantly increase the nonlinearity of discretization system. The overall goal of this research is to develop an Artificial Neural Networks(ANNs) model with low complexity acting as an algebraic turbulence model to estimate the turbulence eddy viscosity for RANS. The ANN turbulence model is off-line trained using the training data generated by the widely used Spalart–Allmaras(SA) turbulence model before the Optimal Brain Surgeon(OBS) is employed to determine the relevancy of input features.Using the selected relevant features, a fully connected ANN model is constructed. The performance of the developed ANN model is numerically tested in the framework of DG for RANS, where the‘‘DG+ANN' method provides robust and steady convergence compared to the ‘‘DG+SA' method. The results demonstrate the promising potential to develop a general turbulence model based on artificial intelligence in the future given the training data covering a large rang of flow conditions. 展开更多
关键词 Artificial neural network DISCONTINUOUS GALERKIN method Fluid Optimal brain SURGEON Spalart–Allmaras TURBULENCE model
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Brain organoids are new tool for drug screening of neurological diseases 被引量:2
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作者 Jin-Qi Zhou Ling-Hui Zeng +5 位作者 Chen-Tao Li Da-Hong He Hao-Duo Zhao Yan-Nan Xu Zi-Tian Jin Chong Gao 《Neural Regeneration Research》 SCIE CAS CSCD 2023年第9期1884-1889,共6页
At the level of in vitro drug screening,the development of a phenotypic analysis system with highcontent screening at the core provides a strong platform to support high-throughput drug screening.There are few systema... At the level of in vitro drug screening,the development of a phenotypic analysis system with highcontent screening at the core provides a strong platform to support high-throughput drug screening.There are few systematic reports on brain organoids,as a new three-dimensional in vitro model,in terms of model stability,key phenotypic fingerprint,and drug screening schemes,and particula rly rega rding the development of screening strategies for massive numbers of traditional Chinese medicine monomers.This paper reviews the development of brain organoids and the advantages of brain organoids over induced neurons or cells in simulated diseases.The paper also highlights the prospects from model stability,induction criteria of brain organoids,and the screening schemes of brain organoids based on the characteristics of brain organoids and the application and development of a high-content screening system. 展开更多
关键词 brain organoids disease modeling high-content system multiple omic analysis network pharmacology NEURODEGENERATION phenotypic fingerprint psychiatric diseases stem cells traditional Chinese medicine drug screening
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权重基因共表达网络分析筛选乳腺癌脑转移相关通路及预测模型构建
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作者 胡萍 朱丽佳 +2 位作者 王秋婷 谢嘉欣 林美珍 《中国优生与遗传杂志》 2025年第3期491-498,共8页
目的通过权重基因共表达网络分析(WGCNA)筛选乳腺癌脑转移(BCBM)相关通路,构建预测模型。方法从基因表达综合数据库(GEO)获取GSE125989、GSE52604数据集,基于GSE125989数据集构建WGCNA,识别与BCBM相关的关键模块并进行基因本体论(GO)、K... 目的通过权重基因共表达网络分析(WGCNA)筛选乳腺癌脑转移(BCBM)相关通路,构建预测模型。方法从基因表达综合数据库(GEO)获取GSE125989、GSE52604数据集,基于GSE125989数据集构建WGCNA,识别与BCBM相关的关键模块并进行基因本体论(GO)、KEGG分析。分析WGCNA关键模块基因与BCBM与非肿瘤性脑组织之间差异表达基因的交集,通过LASSO-Cox回归分析筛选BCBM相关基因,建立风险评分模型,根据中位风险评分将GSE125989、GSE52604数据集患者分为高、低风险组,绘制生存曲线。通过基因集富集分析(GSEA)获得高、低风险组显著富集的生物学通路。单、多因素Cox回归分析BCBM独立预测因素,建立列线图模型并进行模型评价。结果WGCNA中黄色模块(104个基因)与BCBM显著相关(r=0.63),该模块基因可能与分支上皮的形态发生、分支结构的形态发生等生物学过程和信号通路相关。经维恩图、LASSO-Cox回归分析最终获得了12个BCBM相关基因。训练集、验证集低风险组生存率均高于高风险组(P<0.05),时间依赖性ROC曲线AUC分别为0.731、0.667。风险评分、癌症分期、年龄为BCBM的独立预测因素(P<0.05),列线图预测模型预测能力较高。结论基于WGCNA关键模块筛选获得的BCBM相关基因建立的BCBM预测模型预测能力较高,探索与这些基因相关的信号通路利于预测BCBM的发生发展。 展开更多
关键词 权重基因共表达网络分析 乳腺癌 脑转移 信号通路 预测模型
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METHOD FOR QUICKLY INFERRING THE MECHANISMS OF LARGE-SCALE COMPLEX NETWORKS BASED ON THE CENSUS OF SUBGRAPH CONCENTRATIONS 被引量:1
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作者 Bo YANG Xiaorong CHEN 《Journal of Systems Science & Complexity》 SCIE EI CSCD 2009年第2期252-259,共8页
A Mechanism-Inferring method of networks exploited from machine learning theory caneffectively evaluate the predicting performance of a network model.The existing method for inferringnetwork mechanisms based on a cens... A Mechanism-Inferring method of networks exploited from machine learning theory caneffectively evaluate the predicting performance of a network model.The existing method for inferringnetwork mechanisms based on a census of subgraph numbers has some drawbacks,especially the needfor a runtime increasing strongly with network size and network density.In this paper,an improvedmethod has been proposed by introducing a census algorithm of subgraph concentrations.Networkmechanism can be quickly inferred by the new method even though the network has large scale andhigh density.Therefore,the application perspective of mechanism-inferring method has been extendedinto the wider fields of large-scale complex networks.By applying the new method to a case of proteininteraction network,the authors obtain the same inferring result as the existing method,which approvesthe effectiveness of the method. 展开更多
关键词 large-scale complex networks mechanism-inferring model evaluation subgraph census.
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基于卷积自注意力机制的KAN神经网络对脑机接口视觉电刺激信号分类
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作者 高健云 刘松丽 李澍 《中国医疗设备》 2025年第7期10-14,26,共6页
目的对P300视觉电刺激信号分类面临的诸多挑战进行分析,探讨新的潜在解决方案。方法本文提出一种卷积自注意力机制的KAN神经网络模型,该模型能够捕获P300信号的全局特征信息,同时在引入了KAN层后模型能更好地处理非线性数据。在脑机接口... 目的对P300视觉电刺激信号分类面临的诸多挑战进行分析,探讨新的潜在解决方案。方法本文提出一种卷积自注意力机制的KAN神经网络模型,该模型能够捕获P300信号的全局特征信息,同时在引入了KAN层后模型能更好地处理非线性数据。在脑机接口CompetitionⅢChallenge 2004数据集上进行实验验证,并与现行P300视觉电刺激信号分类方法进行比较。结果本文所提模型在验证集上展现出更高的分类准确度,对于P300信号分类准确度为100.0%,优于VGG-16的98.9%和ResNet-18的99.0%。同时在快速梯度下降法攻击实验中准确度为82%。结论本研究不仅为P300视觉电刺激信号的分类提供了一种新的解决方案,也为其他类似的脑信号处理任务提供了新的研究思路。 展开更多
关键词 卷积自注意力机制 KAN神经网络模型 P300视觉信号 脑机接口 脑电图 非线性数据
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