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RNA editing generates mRNA isoforms with distinct stabilities that may expand the thermal tolerance of mRNA and proteins in Mytilus species
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作者 Ming-Ling Liao Ya-Jie Zhu +2 位作者 Xiao-Lu Zhu George N.Somero Yun-Wei Dong 《Zoological Research》 2025年第3期527-537,共11页
Ectothermic organisms may expand their thermal tolerance by producing multiple protein isoforms with differing thermal sensitivities.While such isoforms commonly originate from allelic variation at a single locus(allo... Ectothermic organisms may expand their thermal tolerance by producing multiple protein isoforms with differing thermal sensitivities.While such isoforms commonly originate from allelic variation at a single locus(allozymes)or from gene duplication that gives rise to paralogs with distinct thermal responses,this study investigated mRNA editing as an alternative,post-transcriptional mechanism for generating mRNA variants.Cytosolic malate dehydrogenase(cMDH)was examined in foot tissue of two congeners of the marine mussel genus Mytilus,which occupy different thermal environments.Multiple editing events were detected within the mRNA coding region in both species.Editing sites were species-specific,with no shared positions identified.In M.coruscus,editing occurred at 117,123,135,190,195,204,279,and 444,while in M.galloprovincialis,editing was detected at 216 and 597.Each species exhibited multiple edited mRNA variants,and these isoforms were associated with differential protein expression.These findings suggest that mRNA editing may contribute an additional layer of molecular variation.The generation of diverse mRNA isoforms from a single DNA coding sequence may enhance enzymatic flexibility across temperature ranges,supporting eurythermal physiological performance and mitigating thermal stress.Moreover,the presence of multiple edited transcripts within individual organisms raises important caveats about the limitations of approaches that deduce amino acid sequences or estimate adaptive variation solely from genomic data. 展开更多
关键词 RNA editing mRNA stability mRNA isoform Temperature adaptation
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Identification and analysis of immunological activity of two isoforms of tropomyosin in Alectryonella plicatula
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作者 Shiqiang Yang Yexin Chen +5 位作者 Fei Huan Xinrong He Xiao Yun Hong Liu Guixia Chen Guangming Liu 《Food Science and Human Wellness》 SCIE CAS CSCD 2024年第6期3697-3707,共11页
Oyster,as a common aquatic food,play an important role in shellfish allergy.In this study,2 tropomyosin(TM)isoforms TM-αand TM-β(TM-α/-β)in Alectryonella plicatula were identified.The sequences of 852 bp encoding ... Oyster,as a common aquatic food,play an important role in shellfish allergy.In this study,2 tropomyosin(TM)isoforms TM-αand TM-β(TM-α/-β)in Alectryonella plicatula were identified.The sequences of 852 bp encoding 284 amino acids of TM-α/-βand 2 recombinant proteins were obtained,respectively.There were 12 amino acid differences between TM-α/-β.The results of immunological experiments indicated that TM-βhad stronger immunobinding activity and immunoreactivity than those of TM-α.Structural analysis showed that TM-βhad moreα-helix and higher surface hydrophobicity than TM-α.Sequences and epitopes alignment with shellfish TMs revealed that amino acids of TM-βwere more frequently recognized as IgE epitopes in other shellfish TMs than TM-α.Differences in structure and sequence account for the higher immunological activity of TM-βcompared to TM-α.These findings provide a theoretical basis for enriching the understanding of shellfish TM and accurate diagnosis of allergic components. 展开更多
关键词 Alectryonella plicatula ALLERGEN Immunological activity isoforms TROPOMYOSIN
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Phosphorus Starvation-induced Expression of Leaf Acid Phosphatase Isoforms in Soybean 被引量:10
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作者 田江 廖红 +1 位作者 王秀荣 严小龙 《Acta Botanica Sinica》 CSCD 2003年第9期1037-1042,共6页
Leaf acid phosphatase (APase) activities of 274 soybean genotypes were surveyed under field conditions with two levels of P supplies, and a nutrient solution culture experiment with eight selected genotypes was subseq... Leaf acid phosphatase (APase) activities of 274 soybean genotypes were surveyed under field conditions with two levels of P supplies, and a nutrient solution culture experiment with eight selected genotypes was subsequently conducted under greenhouse conditions to further characterize APase activity and its isoform expression induced by P starvation. Results from the field experiment showed that there was a great genotypic variation for leaf APase activity among the tested soybean genotypes from different origins, and APase activity in many of the tested genotypes (about 60%) was generally increased in the treatment without P fertilizer addition. Results from the nutrient solution culture experiment showed that APase activity in all the eight tested genotypes was generally enhanced by P starvation. Six isoforms of APases were detected in isoelectric focusing gels with samples from both young and old leaves. The activity of all the six isoforms was increased by P starvation, but no new APase isoform was induced. Our results suggest that leaf APase activity could serve as an enzymatic indicator of P starvation for soybean; the increase in leaf APase activity under low P stress was mainly caused by the increase in the activity of existing isoforms but not by the induction of new isoforms. 展开更多
关键词 acid phosphatase activity phosphorus starvation isoelectric focusing gel acid phosphatase isoform SOYBEAN
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Differential Expression of PKC Isoforms and Their Tumoricidal Activity in Two Macrophage Cell Lines: Involvement of Nitric Oxide-dependent Mechanisms 被引量:1
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作者 刘辉 曹惠芳 +3 位作者 孙为民 徐仁宝 吴孟超 王红阳 《The Chinese-German Journal of Clinical Oncology》 CAS 2004年第2期101-105,126,127,共7页
Objective: To investigate the role of PKC isoforms in the regulation of LPS-triggered tumoricidal activity in macrophages and further elucidate its signal mechanisms. Methods: Two macrophage cell lines (P388D1 and RAW... Objective: To investigate the role of PKC isoforms in the regulation of LPS-triggered tumoricidal activity in macrophages and further elucidate its signal mechanisms. Methods: Two macrophage cell lines (P388D1 and RAW264.7) were stimulated by LPS alone, or with long-term of PMA pretreatment. Then cytotoxicities to P815 cells (by MTT assay) and IL-1, TNF- (by ELISA) and nitric oxide (NO) production (by Griess reagent) in supernatants were measured. Western blot for PKC isoforms after long-term PMA pretreatment was analyzed. Results: RAW264.7 cells were stimulated with LPS to kill target tumor cells P815, whereas P388D1 cells failed to develop such an ability. Down-regulation of PKC isoforms by chronic treatment with PMA significantly inhibited the LPS-induced cytotoxicity in RAW264.7 cells. In unstimulated state, Western blotting with rabbit antiserum specific for the PKC, 1, 2, or showed all 5 isoforms were detected in P388D1 cells, while only PKC, PKC1 and PKC were detected in RAW264.7 cells. Exposure of the cells to long-term of PMA treatment significantly down-regulated the expression of PKC, PKC1 and PKC in RAW264.7 cells. But in P388D1 cells, although PKC, PKC and PKC were down-regulated, the expression of PKC1 and PKC2 could not be regulated. Comparing with LPS-induced IL-1, TNF- and NO production by the two macrophage cell lines, P388D1 failed to produce NO. In RAW264.7 cells, LPS-induced NO production and antitumor activity was attenuated by the addition of L-NAME, an iNOS inhibitor. Conclusion: The results indicated a critical role of PKC in LPS-induced antitumor activity and this cytotoxicity is mainly due to PKC- mediated NO production by RAW264.7 cells, but not a direct cytotoxic activity. 展开更多
关键词 lippolysaccaride PKC isoforms MACROPHAGES nitric oxide CYTOTOXICITY
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Hypoxia-preconditioned bone marrow-derived mesenchymal stem cells protect neurons from cardiac arrest-induced pyroptosis 被引量:1
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作者 Xiahong Tang Nan Zheng +8 位作者 Qingming Lin Yan You Zheng Gong Yangping Zhuang Jiali Wu Yu Wang Hanlin Huang Jun Ke Feng Chen 《Neural Regeneration Research》 SCIE CAS 2025年第4期1103-1123,共21页
Cardiac arrest can lead to severe neurological impairment as a result of inflammation,mitochondrial dysfunction,and post-cardiopulmonary resuscitation neurological damage.Hypoxic preconditioning has been shown to impr... Cardiac arrest can lead to severe neurological impairment as a result of inflammation,mitochondrial dysfunction,and post-cardiopulmonary resuscitation neurological damage.Hypoxic preconditioning has been shown to improve migration and survival of bone marrow–derived mesenchymal stem cells and reduce pyroptosis after cardiac arrest,but the specific mechanisms by which hypoxia-preconditioned bone marrow–derived mesenchymal stem cells protect against brain injury after cardiac arrest are unknown.To this end,we established an in vitro co-culture model of bone marrow–derived mesenchymal stem cells and oxygen–glucose deprived primary neurons and found that hypoxic preconditioning enhanced the protective effect of bone marrow stromal stem cells against neuronal pyroptosis,possibly through inhibition of the MAPK and nuclear factor κB pathways.Subsequently,we transplanted hypoxia-preconditioned bone marrow–derived mesenchymal stem cells into the lateral ventricle after the return of spontaneous circulation in an 8-minute cardiac arrest rat model induced by asphyxia.The results showed that hypoxia-preconditioned bone marrow–derived mesenchymal stem cells significantly reduced cardiac arrest–induced neuronal pyroptosis,oxidative stress,and mitochondrial damage,whereas knockdown of the liver isoform of phosphofructokinase in bone marrow–derived mesenchymal stem cells inhibited these effects.To conclude,hypoxia-preconditioned bone marrow–derived mesenchymal stem cells offer a promising therapeutic approach for neuronal injury following cardiac arrest,and their beneficial effects are potentially associated with increased expression of the liver isoform of phosphofructokinase following hypoxic preconditioning. 展开更多
关键词 bone marrow–derived mesenchymal stem cells cardiac arrest cardiac resuscitation hypoxic preconditioning liver isoform of phosphofructokinase mitochondria NEUROINFLAMMATION oxidative stress PYROPTOSIS reactive oxygen species
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Analysis of Gene Expression of Seven Isoforms of ADP-glucose Pyrophosphorylase in Rice Endosperm under Different Temperature Conditions
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作者 袁定阳 孙志忠 +1 位作者 谭炎宁 段美娟 《Agricultural Science & Technology》 CAS 2012年第6期1226-1229,1233,共5页
[Objective] This study aimed to analyze the effects of temperature on the expression of AGPase isoform genes in rice endosperm during milk stage. [Method] Different temperature treatments (33 and 25 ℃ of daily mean ... [Objective] This study aimed to analyze the effects of temperature on the expression of AGPase isoform genes in rice endosperm during milk stage. [Method] Different temperature treatments (33 and 25 ℃ of daily mean temperature for high and normal temperature treatments, respectively) and the real-time fluorescence quantitative PCR ( FQPCR) were used to analyze the expression patterns of seven isoforms (AGPS1, AGPS2a, AGPS2b, AGPL1, AGPL2, AGPL3 and AGPL4) of ADPglucose pyrophosphorylase (AGPase) which was the key enzyme in starch synthesis and metabolism in rice endosperm of two rice varieties Teqing and Thai Fragrant Rice. [Result] The AGPase isoforms AGPS2b, AGPL2 and AGPL3 had much higher expression than the other four isoforms, thus they were thought to be the main expression patterns of AGPase in rice endosperm. The relative expressions of AGPL2 was the highest among all the isoforms. The relative expressions of AGPS2b, AGPL2 and AGPL3 were higher in the normal temperature treatment than in the high temperature treatment in both rice varieties. The relative expression of the three enzyme genes in milk stages in Teqing was higher than those in Thai Fragrant Rice under different temperature treatments. [Conclusion] This study provides a theoretical basis for further use of molecular biology techniques to cultivate stable high-quality rice varieties. 展开更多
关键词 RICE ADP-glucose pyrophosphorylase (AGPase) isoforms Gene expression characteristics Real-time fluorescence quantitative PCR (FQ-PCR)
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Neuropsychiatric symptoms and apolipoprotein E genotypes in neurocognitive disorders
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作者 Madia Lozupone Ivana Leccisotti +9 位作者 Anita Mollica Giuseppe Berardino Maria Claudia Moretti Mario Altamura Antonello Bellomo Antonio Daniele Vittorio Dibello Vincenzo Solfrizzi Emanuela Resta Francesco Panza 《Neural Regeneration Research》 2026年第4期1528-1541,共14页
Complex genetic relationships between neurodegenerative disorders and neuropsychiatric symptoms have been shown, suggesting shared pathogenic mechanisms and emphasizing the potential for developing common therapeutic ... Complex genetic relationships between neurodegenerative disorders and neuropsychiatric symptoms have been shown, suggesting shared pathogenic mechanisms and emphasizing the potential for developing common therapeutic targets. Apolipoprotein E(APOE) genotypes and their corresponding protein(Apo E) isoforms may influence the biophysical properties of the cell membrane lipid bilayer. However, the role of APOE in central nervous system pathophysiology extended beyond its lipid transport function. In the present review article, we analyzed the links existing between APOE genotypes and the neurobiology of neuropsychiatric symptoms in neurodegenerative and vascular diseases. APOE genotypes(APOE ε2, APOE ε3, and APOE ε4) were implicated in common mechanisms underlying a wide spectrum of neurodegenerative diseases, including sporadic Alzheimer's disease, synucleinopathies such as Parkinson's disease and Lewy body disease, stroke, and traumatic brain injury. These shared pathways often involved neuroinflammation, abnormal protein accumulation, or responses to acute detrimental events. Across these conditions, APOE variants are believed to contribute to the modulation of inflammatory responses, the regulation of amyloid and tau pathology, as well as the clearance of proteins such as α-synuclein. The bidirectional interactions among Apo E, amyloid and mitochondrial metabolism, immunomodulatory effects, neuronal repair, and remodeling underscored the complexity of Apo E's role in neuropsychiatric symptoms associated with these conditions since from early phases of cognitive impairment such as mild cognitive impairment and mild behavioral impairment. Besides Apo E-specific isoforms' link to increased neuropsychiatric symptoms in Alzheimer's disease(depression, psychosis, aberrant motor behaviors, and anxiety, not apathy), the APOE ε4 genotype was also considered a significant genetic risk factor for Lewy body disease and its worse cognitive outcomes. Conversely, the APOE ε2 variant has been observed not to exert a protective effect equally in all neurodegenerative diseases. Specifically, in Lewy body disease, this variant may delay disease onset, paralleling its protective role in Alzheimer's disease, although its role in frontotemporal dementia is uncertain. The APOE ε4 genotype has been associated with adverse cognitive outcomes across other various neurodegenerative conditions. In Parkinson's disease, the APOE ε4 allele significantly impacted cognitive performance, increasing the risk of developing dementia, even in cases of pure synucleinopathies with minimal co-pathology from Alzheimer's disease. Similarly, in traumatic brain injury, recovery rates varied, with APOE ε4 carriers demonstrating a greater risk of poor long-term cognitive outcomes and elevated levels of neuropsychiatric symptoms. Furthermore, APOE ε4 influenced the age of onset and severity of stroke, as well as the likelihood of developing stroke-associated dementia, potentially due to its role in compromising endothelial integrity and promoting blood–brain barrier dysfunction. 展开更多
关键词 Alzheimer's disease ApoE isoforms apolipoprotein E gene DEPRESSION Lewy body disease mild cognitive impairment NEUROINFLAMMATION neuropsychiatric symptoms Parkinson's disease stroke traumatic brain injury
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Modulation of flowering by an alternatively spliced AGL18-1 transcript in Brassica juncea
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作者 Qinlin Deng Huanhuan Lu +5 位作者 Dakun Liu Yifang Huang Junjie Feng Dayong Wei Zhimin Wang Qinglin Tang 《The Crop Journal》 2025年第2期456-467,共12页
Photoperiod and temperature are crucial factors that trigger flowering in Brassica juncea(B.juncea).However,the underlying regulatory mechanisms remain poorly understood.The MADS-box transcription factor AGL18 acts as... Photoperiod and temperature are crucial factors that trigger flowering in Brassica juncea(B.juncea).However,the underlying regulatory mechanisms remain poorly understood.The MADS-box transcription factor AGL18 acts as a pivotal repressor of floral transition and functions redundantly with AGL15.In this study,we isolated BjuAGL18-1 from B.juncea and identified two unique transcripts,resulting in two distinct proteins:a full-length protein,BjuAGL18-1L,and a truncated protein,BjuAGL18-1S.Further investigation showed that the two isoforms had similar subcellular localizations but different expression patterns in various plant tissues.Notably,BjuAGL18-1L and BjuAGL18-1S were abundantly induced under short-and long-day photoperiods,respectively.BjuAGL18-1L overexpression in B.juncea and Arabidopsis thaliana(A.thaliana)led to late flowering,whereas BjuAGL18-1S overexpression resulted in early flowering.Yeast two-hybrid,bimolecular fluorescent complementation,and luciferase complementation assays showed that BjuAGL18-1L,but not BjuAGL18-1S(which lacked the EAR motif),interacted with the co-repressor BjuAFR2 and the histone deacetylase BjuHDA9 to form a multiprotein complex.Further analysis indicated that BjuAGL18-1L could also form a complex with BjuAGL15 and bind to the BjuFUL promoter,thus inhibiting its expression.However,BjuAGL18-1S interacted with BjuAGL18-1L to form heterodimers,which attenuated their activities,likely by disrupting their binding to target genes,resulting in accelerated flowering progression.These results suggest that BjuAGL18-1 is involved in photoperiod-induced flowering via different regulatory mechanisms in B.juncea. 展开更多
关键词 Brassica juncea BjuAGL18-1 ISOFORM PHOTOPERIOD FLOWERING
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Electroacupuncture participates in pain transition through the KCC2/GABAAR pathway in the spinal dorsal horn of male rats
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作者 Mengting Shi Yangkun Liu +4 位作者 Yi Liang Junfan Fang Yin Jin Ruijie Ma Jie Zhou 《Acupuncture and Herbal Medicine》 2025年第2期217-228,共12页
Objective:Preventing the transition from acute to chronic pain(pain transition)is a new strategy for treating chronic pain.The present study aimed to investigate the role of K+-Cl−Cotransporter Isoform 2(KCC2)andγ-am... Objective:Preventing the transition from acute to chronic pain(pain transition)is a new strategy for treating chronic pain.The present study aimed to investigate the role of K+-Cl−Cotransporter Isoform 2(KCC2)andγ-aminobutyric acid receptor type A(GABAAR)in the spinal cord dorsal horn(SCDH)in pain transition and the intervention effect of electroacupuncture(EA),and to understand the mechanism of EA in preventing acute and chronic pain transition in the spinal center.Methods:A rat model of hyperalgesic priming(HP)was established by injecting carrageenan(Car)into the plantar area of rats,followed by the injection of prostaglandin E2(PGE2)into the dorsal foot 7 days later.The GABAAR agonist(muscimol)and KCC2 activator(CLP257)were intrathecally injected for three consecutive days after PGE2 injection.EA was applied at a frequency of 2/100 Hz to the bilateral foot Zusanli(ST36)and Kunlun(BL60).A von Frey filament was used to detect the pain threshold in each group of rats.Western blotting(WB)and immunofluorescence(IF)were used to detect GABAAR and KCC2 expression in each rats group.By combining EA intervention with a KCC2 inhibitor(VU0240551),we explored the mechanism of pain transition of EA regulation of GABAAR and KCC2 expression in SCDH.Results:The HP model was established by injecting mice with Car/PGE2.Compared to the normal saline(NS)+NS and NS+PGE2 groups,the pain threshold of the Car+PGE2 group decreased significantly 48 hours after PGE2 injection(P<0.01).The WB results indicated that intrathecal injection of a GABAAR agonist upregulated GABAAR expression in the SCDH of HP model rats(P<0.05).WB and IF results revealed that intrathecal injection of the KCC2 activator significantly increased GABAAR and KCC2 expression in the SCDH of HP model rats(P<0.01)and that GABAAR and KCC2 were co-expressed in the same SCDH cells.Compared to the Car+PGE2 group,EA intervention significantly increased MWTs from 48 to 72 hours after the first injection and 4,24,and 48 hours after the second injection(P<0.01).EA upregulated GABAAR and KCC2 expression in the SCDH of rats with HP(P<0.05).Intrathecal injection of the KCC2 inhibitor blocked the analgesic effect of EA in HP model rats(P<0.01).Conclusions:In SCDH,KCC2 expression was downregulated,causing downregulation of GABAAR expression and resulting in pain transition.EA upregulates KCC2 and GABAAR expression and prevents pain transition. 展开更多
关键词 γ-Aminobutyric acid receptor type A ELECTROACUPUNCTURE Hyperalgesic priming K^(+)-Cl−cotransporter isoform 2 Spinal dorsal horn
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Survivin isoforms and clinicopathological characteristics in colorectal adenocarcinomas using real-time qPCR 被引量:9
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作者 Anastasia Pavlidou Maria Dalamaga +4 位作者 Christos Kroupis George Konstantoudakis Maria Belimezi George Athanasas Kleanthi Dimas 《World Journal of Gastroenterology》 SCIE CAS CSCD 2011年第12期1614-1621,共8页
AIM:To investigate three isoforms of survivin in colorectal adenocarcinomas.METHODS:We used the LightCycler Technology(Roche),along with a common forward primer and reverse primers specific for the splice variants and... AIM:To investigate three isoforms of survivin in colorectal adenocarcinomas.METHODS:We used the LightCycler Technology(Roche),along with a common forward primer and reverse primers specific for the splice variants and two common hybridization probes labeled with fluorescein and LightCycler-Red fluorophore(LC-Red 640).Real time quantitative polymerase chain reaction(PCR) was performed on cDNAs from 52 tumor specimens from colorectal cancer patients and 10 unrelated normal colorectal tissues.In the patients group,carcinoembryonic antigen(CEA) and CA19-9 tumor markers were also measured immunochemically.RESULTS:Wild type survivin mRNA isoform was expressed in 48%of the 52 tumor samples,survivin-2b in 38%and survivin-ΔΕx3 in 29%,while no expression was found in normal tissues.The mRNA expression of wild type survivin presented a significant correlation with the expression of the ratio of survivin-2b,survivin-ΔΕx3,survivin-2b/wild type survivin and survivin-ΔΕx3/wild type survivin(P<0.001).The mRNA expression of wildsurvivin and survivin-ΔΕx3 was related with tumor size and invasion(P=0.006 and P<0.005,respectively).A significant difference was found between survivin-2b and morphologic cancer type.Also,the ratio of survivin-ΔEx3/ wild-survivin was significantly associated with prognosis.No association was observed between the three isoforms and grade,metastasis,Dukes stage and gender.The three isoforms were not correlated with CEA and CA19-9.CONCLUSION:Survivin isoforms may play a role in cell apoptosis and their quantification could provide information about clinical management of patients suffering from colorectal cancer. 展开更多
关键词 SURVIVIN mRNA isoforms Apoptosis gene Colorectal adenocarcinomas Real time quantitative polymerase chain reaction LIGHTCYCLER
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Androgen receptor isoforms in human and rat prostate 被引量:12
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作者 Shu-JieXIA Gang-YaoHAO Xiao-DaTANG 《Asian Journal of Andrology》 SCIE CAS CSCD 2000年第4期307-310,共4页
Aim: To investigate the androgen receptor (AR) isoforms and its variability of expression in human and rat prostatictissues. Methods: Human benign prostatic hyperplasia (BPH) and prostatic cancer tissues were obtained... Aim: To investigate the androgen receptor (AR) isoforms and its variability of expression in human and rat prostatictissues. Methods: Human benign prostatic hyperplasia (BPH) and prostatic cancer tissues were obtained from pa-tients undergoing prostatectomy, and rat ventral prostate was incised 3 days after castration. Forty-one AR-positive BPHspecimens, 3 prostatic cancer specimens, and 6 rat prostates were used. After processing at 4℃, the tissues were ex-amined by means of high resolution isoelectric focusing (IEF) technique to determine their AR isoforms. Results:From the prostatic specimens, 3 types of AR isoforms were detected with pI values at 6.5, 6.0, and 5.3. In humanBPH tissues, 15/41 (36.6%) specimens showed all the three types of isoforms, while 19/41 (46.3%) showed 2 iso-fora at various combinations and 7/41 (17.1%), 1 isoform. For the 3 prostatic cancer specimens, one showed 3 iso-forms, one, 2 isoforms, and the other failed to show any isoform. All rat prostatic tissues showed 2 isoforms at differ-ent combinations. Binding of ~3H-dihydrotestosterone (DHT) to the isoforms was inhibited by the addition of 100-foldexcess of DHT or testosterone, but not progesterone, oestradiol or diethylstilboestrol. Conclusion: AR isoforms aredifferent in different patients. Although their genesis is not clear, the therapeutic implication of the present observationappears to be interesting, that may help clarifying the individual differences in the response to hormonal therapy.(Asian J Androl 2000 Dec; 2: 307-310) 展开更多
关键词 androgen receptors isoforms PROSTATE
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Identification of the metabolite and cytochrome P450 isoforms involved in rat liver microsomal metabolism of TM208
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作者 孔德涛 凌笑梅 +4 位作者 韩方斌 龚京莉 葛泽梅 李润涛 崔景荣 《Journal of Chinese Pharmaceutical Sciences》 CAS 2008年第1期30-34,共5页
To identify the metabolite and CYP450 isoforms involved in rat liver microsomal metabolism of TM208. The present study investigated the metabolism of TM208 and the effects of selective CYP450 inhibitors on the metabol... To identify the metabolite and CYP450 isoforms involved in rat liver microsomal metabolism of TM208. The present study investigated the metabolism of TM208 and the effects of selective CYP450 inhibitors on the metabolism of TM208 in rat liver microsomes. Various specific inhibitors of CYP were used to identify the isoforms of CYP involved in the metabolism of TM208. The inhibitor of CYP2D and that of CYP2B had strong inhibitory effects on TM208 metabolism in a concentration-de- pendant manner, the inhibitor of CYP1A had a modest inhibitory effect, and the inhibitor of CYP3A seemed not to have an obvious inhibitory effect on TM208 metabolism. TM208 might mainly be metabolized by CYP2D and CYP2B in rat liver microsomes. 展开更多
关键词 TM208 Rat liver microsomes METABOLISM Cytochrome P450 isoform
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Role of PRMTs in cancer: Could minor isoforms be leaving a mark? 被引量:14
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作者 R Mitchell Baldwin Alan Morettin Jocelyn C té 《World Journal of Biological Chemistry》 CAS 2014年第2期115-129,共15页
Protein arginine methyltransferases(PRMTs) catalyze the methylation of a variety of protein substrates, many of which have been linked to the development, progression and aggressiveness of different types of cancer. M... Protein arginine methyltransferases(PRMTs) catalyze the methylation of a variety of protein substrates, many of which have been linked to the development, progression and aggressiveness of different types of cancer. Moreover, aberrant expression of PRMTs has been observed in several cancer types. While the link between PRMTs and cancer is a relatively new area of interest, the functional implications documented thus far warrant further investigations into its therapeutic potential. However, the expression of these enzymes and the regulation of their activity in cancer are still significantly understudied. Currently there are nine main members of the PRMT family. Further, the existence of alternatively spliced isoforms for several of these family members provides an additional layer of complexity. Specifically, PRMT1, PRMT2, CARM1 and PRMT7 have been shown to have alternative isoforms and others may be currently unrealized. Our knowledge with respect to the relative expression and the specific functions of these isoforms is largely lacking and needs attention. Here we present a review of the current knowledge of theknown alternative PRMT isoforms and provide a rationale for how they may impact on cancer and represent potentially useful targets for the development of novel therapeutic strategies. 展开更多
关键词 Protein ARGININE METHYLTRANSFERASE ARGININE methylation Cancer Alternative SPLICING isoforms
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Characterization of four hemocyanin isoforms in Litopenaeus vannamei 被引量:4
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作者 XU Jingxiang RUAN Lingwei +4 位作者 LI Zhen YU Xiaoman LI Sedong SHI Hong XU Xun 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2015年第2期36-44,共9页
In this study, the gene encoding hemocyanin subunit L, Lv Hc L, was cloned from Litopenaeus vannamei and the genomic organization was characterized. This gene was diverse with many SNPs and also had at least four isof... In this study, the gene encoding hemocyanin subunit L, Lv Hc L, was cloned from Litopenaeus vannamei and the genomic organization was characterized. This gene was diverse with many SNPs and also had at least four isoforms, while one of them(Lv Hc L4) only had two exons and the exon2 was missed. Transcription analysis showed that these isoforms of Lv Hc L were up-regulated after WSSV challenge in WSSV-resistant shrimp, while the transcriptions were decreased constantly in WSSV-susceptible shrimp. It is suggested that the hemocyanin had rich polymorphism and was involved in the antiviral response. These results could extend our previous findings and provide insights into the immune feature of hemocyanin, which would be helpful for further studies aimed at antiviral mechanism in invertebrate. 展开更多
关键词 HEMOCYANIN SNPS isoforms Litopenaeus vannamei WSSV
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Changes of Levels of Glutamine Synthetase Isoforms in Roots and Leaves in Responseto Nitrogen Fertilizer Application at Different Growth Stages in Irrigated Rice 被引量:4
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作者 Zhang Chufu Peng Shaobing John Bennett 《Wuhan University Journal of Natural Sciences》 CAS 1998年第4期476-480,共5页
Nitrogen is a key element to control the growth and yield of crops. Fertilizer urea nitrogen (N) 60,45, and 30 kg/hm2 was applied at three different stages, midtillering, panicle initiation, and flowering, of the grow... Nitrogen is a key element to control the growth and yield of crops. Fertilizer urea nitrogen (N) 60,45, and 30 kg/hm2 was applied at three different stages, midtillering, panicle initiation, and flowering, of the growth and development of rice plants, respectively. At both midtillering and panicle initiation, the total activity of glutamine synthetase (GS) in rice roots and leaves was incrased remarkably as a result of a large amount of ammonia absorbed by roots. Native-PAGE and activity staining showed that the increase of total activity in rice roots and leaves was due to the synthesis of GSrb in roots and GS2 in leaves and that the activity of GSra in roots and GS1 in leaves remained constant. The results showed that the assimilation of external nitrogen was carried out by GSrb but not GSra in rice roots and that the activitry of GS2 was induced also by the external nitrogen, and that GSrb played main role in meeting the needs of the rapid tillering for nitrogen. At flowering, the activity of GS in rice roots and leaves did not change almost after topdressing. These rssults suggest that the change of GS activity in rice roots may use as a measure of the utilization efficiency of the fertilizer. 展开更多
关键词 glutamine synthetase ISOFORM RICE nitrogen
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Aberrant expression of alternative isoforms of transcription factors in hepatocellular carcinoma 被引量:3
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作者 Olga Krivtsova Anna Makarova Natalia Lazarevich 《World Journal of Hepatology》 CAS 2018年第10期645-661,共17页
Hepatocellular carcinoma(HCC) is one of the most prevalent malignancies worldwide and the second leading cause of death among all cancer types. Deregulation of the networks of tissue-specific transcription factors(TFs... Hepatocellular carcinoma(HCC) is one of the most prevalent malignancies worldwide and the second leading cause of death among all cancer types. Deregulation of the networks of tissue-specific transcription factors(TFs) observed in HCC leads to profound changes in the hepatic transcriptional program that facilitates tumor progression. In addition, recent reports suggest that substantial aberrations in the production of TF isoforms occur in HCC. In vitro experiments have identified distinct isoform-specific regulatory functions and related biological effects of liver-specific TFs that are implicated in carcinogenesis, which may be relevant for tumor progression and clinical outcome. This study reviews available data on the expression of isoforms of liver-specific and ubiquitous TFs in the liver and HCC and their effects, including HNF4α, C/EBPs, p73 and TCF7 L2, and indicates that assessment of the ratio of isoforms and targeting specific TF variants may be beneficial for the prognosis and treatment of HCC. 展开更多
关键词 ALTERNATIVE isoforms TRANSCRIPTION factors HEPATOCELLULAR carcinoma ALTERNATIVE SPLICING Hepatic differentiation Personalized treatment
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ApoE isoforms,treatment of diabetes and the risk of coronary heart disease 被引量:3
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作者 Hideki Ehara Ritsuko Yamamoto-Honda +4 位作者 Hiroji Kitazato Yoshihiko Takahashi Shoji Kawazu Yasuo Akanuma Mitsuhiko Noda 《World Journal of Diabetes》 SCIE CAS 2012年第3期54-59,共6页
AIM:To analyze the risk of coronary heart disease in patients with type 2 diabetes mellitus(T2DM)receiving standard medical treatment.METHODS:We performed a retrospective chart analysis of 269 middle-aged patients(age... AIM:To analyze the risk of coronary heart disease in patients with type 2 diabetes mellitus(T2DM)receiving standard medical treatment.METHODS:We performed a retrospective chart analysis of 269 middle-aged patients(age 45-64 years,mean age,53.9±5.5 years)with T2DM and without atherosclerotic cardiovascular events who underwent typing to determine their apolipoprotein E(apoE)isoforms.The apoE isoforms were determined using isoelectric focusing,followed by immunoblotting.We retrospectively evaluated the charts of the 269 patients,recorded between their first visit to the hospital(the study's start point,between 1987 and 1992)and the occurrence of an atherosclerotic cardiovascular event(the study's endpoint)or January 2004,whichever came first.The age-adjusted mean values and the prevalences of covariates were calculated to compare the laboratory data among the apoE phenotypes.To investigate the association of risk factors with the incidence of coronary heart disease during the follow-up period,monovariate and multivariate Cox regression models were used.RESULTS:At enrollment,the mean serum low density lipoprotein(LDL)cholesterol levels were lowest(2.92± 0.89 mmol/L)among the subjects with apoE2(apoE2/2 or apoE2/3)and highest(3.52±0.77 mmol/L)among the subjects with apoE4(apoE3/4 or apoE4/4).No significant differences in mean age or the percentage of smokers were observed among the three groups.Furthermore,no significant differences were observed in the systolic and diastolic blood pressures,body mass index,HbA1c level or serum triglyceride levels among the three groups.There were 47 cases of coronary heart disease over 3285 person-years of follow-up.An age-adjusted multivariate Cox proportional model identified diabetic retinopathy(hazard ratio,2.38,95% CI:1.28-4.43,P=0.006),a high systolic blood pressure(hazard ratio,1.04,95%CI:1.02-1.06,P<0.001) and high HbA1c values(hazard ratio,1.19,95%CI:1.02-1.38,P=0.0029),but not the LDL cholesterol value at enrollment(hazard ratio,1.01,95%CI:0.97-1.05,P=0.77)nor the specific apoE isoform,as significant predictors of coronary heart disease.CONCLUSION:Under standard medical treatment of diabetes,including the control of LDL cholesterol levels,the apoE4 isoform was not associated with coronary heart disease among T2DM patients. 展开更多
关键词 Type 2 DIABETES Atherosclerosis APOLIPOPROTEIN E ISOFORM
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p53 and its isoforms in DNA double-stranded break repair 被引量:3
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作者 Yu-xi ZHANG Wen-ya PAN Jun CHEN 《Journal of Zhejiang University-Science B(Biomedicine & Biotechnology)》 SCIE CAS CSCD 2019年第6期457-466,共10页
DNA double-stranded break(DSB)is one of the most catastrophic damages of genotoxic insult.Inappropriate repair of DNA DSBs results in the loss of genetic information,mutation,and the generation of harmful genomic rear... DNA double-stranded break(DSB)is one of the most catastrophic damages of genotoxic insult.Inappropriate repair of DNA DSBs results in the loss of genetic information,mutation,and the generation of harmful genomic rearrangements,which predisposes an organism to immunodeficiency,neurological damage,and cancer.The tumor repressor p53 plays a key role in DNA damage response,and has been found to be mutated in 50%of human cancer.p53,p63,and p73 are three members of the p53 gene family.Recent discoveries have shown that human p53 gene encodes at least 12 isoforms.Different p53 members and isoforms play various roles in orchestrating DNA damage response to maintain genomic integrity.This review briefly explores the functions of p53 and its isoforms in DNA DSB repair. 展开更多
关键词 P53 p53 isoform DNA double-stranded break repair Cell death
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Multiple Isoforms of Olive Flounder (Paralichthys olivaceus) Pax3a and Pax3b Display Differential Regulations on Myogenic Differentiation 被引量:1
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作者 JIAO Shuang TAN Xungang +1 位作者 YOU Feng PANG Qiuxiang 《Journal of Ocean University of China》 SCIE CAS CSCD 2022年第5期1295-1306,共12页
Paired box 3(Pax3)is a critical upstream regulator of the onset of myogenesis.We have previously identified two spliced isoforms of pax3a(pax3a-1 and pax3a-2)and three spliced isoforms of pax3b(pax3b-1,pax3b-2,and pax... Paired box 3(Pax3)is a critical upstream regulator of the onset of myogenesis.We have previously identified two spliced isoforms of pax3a(pax3a-1 and pax3a-2)and three spliced isoforms of pax3b(pax3b-1,pax3b-2,and pax3b-3)in olive flounder,but their roles in myogenesis are unknown.In this study,we investigated their cellular localization,transcriptional activity on myod gene regulation,and roles in myogenesis.Different Pax3a and Pax3b isoforms revealed various subcellular localizations,which were related to their corresponding protein structures.Pax3a-1,Pax3a-2,and Pax3b-1 promoted the transcriptional activity of myod to dif-ferent degrees,whereas Pax3b-2 and Pax3b-3 had a slight inhibitory or no effect.The pairwise interaction analysis demonstrated the synergistic effect of Pax3b-1 and Pax3b-3 on myod transcriptional activity.The overexpression of different pax3a and pax3b isoforms differentially altered the spatial expression patterns of myod and differentially regulated the expression levels of their target genes(myod,myf5,and c-met)in zebrafish embryonic myogenesis.In addition,the different flounder myod promoter-driven pax3a/3b isoform expression vectors were successfully introduced into the skeletal muscles of juvenile flounder by electroporation.How-ever,none of them could change the mRNA expression levels of mstn,myf5,myod,myogenin,pax7a,and pax7b in the electroporated muscles.These results suggest that different Pax3a and Pax3b isoforms may precisely and collaboratively regulate embryonic myogenesis,but their roles in juvenile myogenesis are uncertain. 展开更多
关键词 Pax3a Pax3b isoforms MYOD MYOGENESIS
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Effects of CXCL12 isoforms in a pancreatic pre-tumour cellular model:Microarray analysis 被引量:1
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作者 Monia Cecati Matteo Giulietti +2 位作者 Alessandra Righetti Berina Sabanovic Francesco Piva 《World Journal of Gastroenterology》 SCIE CAS 2021年第15期1616-1629,共14页
BACKGROUND Pancreatic ductal adenocarcinoma(PDAC)is the fourth leading cause of death among cancers,it is characterized by poor prognosis and strong chemoresistance.In the PDAC microenvironment,stromal cells release d... BACKGROUND Pancreatic ductal adenocarcinoma(PDAC)is the fourth leading cause of death among cancers,it is characterized by poor prognosis and strong chemoresistance.In the PDAC microenvironment,stromal cells release different extracellular components,including CXCL12.The CXCL12 is a chemokine promoting the communication between tumour and stromal cells.Six different splicing isoforms of CXCL12 are known(α,β,γ,δ,ε,θ)but their role in PDAC has not yet been characterized.AIM To investigate the specific role ofα,β,andγCXCL12 isoforms in PDAC onset.METHODS We used hTERT-HPNE E6/E7/KRasG12D(Human Pancreatic Nestin-Expressing)cell line as a pancreatic pre-tumour model and exposed it to theα,β,andγCXCL12 isoforms.The altered expression profiles were assessed by microarray analyses and confirmed by Real-Time polymerase chain reaction.The functional enrichment analyses have been performed by Enrichr tool to highlight Gene Ontology enriched terms.In addition,wound healing assays have been carried out to assess the phenotypic changes,in terms of migration ability,induced by theα,β,andγCXCL12 isoforms.RESULTS Microarray analysis of hTERT-HPNE cells treated with the three different CXCL12 isoforms highlighted that the expression of only a few genes was altered.Moreover,theαandβisoforms showed an alteration in expression of different genes,whereasγisoform affected the expression of genes also common withαandβisoforms.Theβisoform altered the expression of genes mainly involved in cell cycle regulation.In addition,all isoforms affected the expression of genes assay confirmed that CXCL12 enhanced the migration ability of hTERT-HPNE cells.Among the CXCL12 splicing isoforms,theγisoform showed higher induction of migration thanαandβisoforms.CONCLUSION Our data suggests an involvement and different roles of CXCL12 isoforms in PDAC onset.However,more investigations are needed to confirm these preliminary observations. 展开更多
关键词 CXCL12 Splicing isoforms Pancreatic cancer Microarray Migration Wound healing assay
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