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Strongly Tilted Field Induced Hamiltonian Dimerization and Nested Quantum Scars in the 1D Spinless Fermi-Hubbard Model
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作者 Wei-Jie Huang Yu-Biao Wu +2 位作者 Guang-Can Guo Wu-Ming Liu Xu-Bo Zou 《Chinese Physics Letters》 2025年第8期106-120,共15页
We investigate the quantum dynamics of the 1D spinless Fermi-Hubbard model with a linear-tilted potential.Surprisingly in a strong resonance regime,we show that the model can be described by the kinetically constraine... We investigate the quantum dynamics of the 1D spinless Fermi-Hubbard model with a linear-tilted potential.Surprisingly in a strong resonance regime,we show that the model can be described by the kinetically constrained effective Hamiltonian,and it can be spontaneously divided into two commuting parts dubbed Hamiltonian dimerization,which are composed of two distinct sets of constrained nearest-neighbor hopping terms:one set acting exclusively on odd bonds and the other on even bonds.Specifically it is shown that each part can be independently mapped onto the well-known PXP model;therefore the dimerized Hamiltonian is equivalent to a two-fold PXP model.As a consequence,we numerically demonstrate this system can host the so-called quantum many-body scars,which present dynamical revivals and ergodicity-breaking behaviors.However,in sharp contrast with traditional quantum many-body scars,here the scarring states in our model driven by different parts of the Hamiltonian will revive in different periods,and those of double parts can display a biperiodic revival pattern,both originating from the Hamiltonian dimerization.Besides,the condition of off-resonance is also discussed,and we show the crossover from quantum many-body scar to ergodicity breaking is diagnosed via level statistics.Our model provides a platform for understanding the interplay of Hilbert space fragmentation and the constrained quantum systems. 展开更多
关键词 kinetically constrained effective hamiltonianand commuting parts Hamiltonian dimerization quantum dynamics kinetically constrained effective Hamiltonian quantum scars strong resonance regimewe hamiltonian dimerizationwhich
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The significance of NO_(2) dimerization in plasma-based NO_(x) synthesis for nitrogen fixation
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作者 Thijs van Raak Huub van den Bogaard +1 位作者 Fausto Gallucci Sirui Li 《Journal of Energy Chemistry》 SCIE EI CAS CSCD 2024年第12期522-528,共7页
Plasma-based NO_(x) synthesis has been considered as a sustainable alternative to the conventional HaberBosch process.Despite the advancements in research achieved in recent years,limited attention has been paid to th... Plasma-based NO_(x) synthesis has been considered as a sustainable alternative to the conventional HaberBosch process.Despite the advancements in research achieved in recent years,limited attention has been paid to the reversible dimerization reaction of NO_(2) to N_(2)O_(4).This reaction can significantly alter the parameters considered with the process’output,such as the concentration or volume fraction of products and the energy consumption.This work aims to investigate the significance of dimerization through theoretical analysis and experimentation.Experiments were conducted with a 2D-gliding arc reactor to evaluate the influence of dimerization in the case of plasma reactor operation.It was observed that the dimerization reaction reached equilibrium in microseconds,resulting in a maximum hypothetical NO_(2) equilibrium conversion of 48.8%.For plasma experiments,the dimerization could cause a maximum error of 14.1%in product detection,which needs to be carefully considered along with the influence of temperature variations on the measurement. 展开更多
关键词 Nitrogen fixation N_(2)O_(4) dimerization NO_(x)synthesis Non-thermal plasma Gliding arc reactor
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Catalytic Reaction Kinetics of Propylene Dimerization to 4-Methyl-1-Pentene Using Cu-K/K_(2)CO_(3) Solid Base Catalyst
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作者 Jin Haibo Chai Jing +3 位作者 Yang Suohe He Guangxiang Ma Lei Guo Xiaoyan 《China Petroleum Processing & Petrochemical Technology》 SCIE CAS CSCD 2024年第1期78-87,共10页
The catalysis technology of propylene dimerization to form 4-methyl-1-pentene(4MP1)using a Cu-K/K_(2)CO_(3) solid base catalyst is a well-known heterogeneous catalytic reaction.In this study,the intrinsic kinetics of ... The catalysis technology of propylene dimerization to form 4-methyl-1-pentene(4MP1)using a Cu-K/K_(2)CO_(3) solid base catalyst is a well-known heterogeneous catalytic reaction.In this study,the intrinsic kinetics of propylene dimerization were studied in a fixed-bed continuous reactor.Internal and external diffusion during the dimerization reaction experiments were eliminated by adjusting the flow rate of the carrier gas and the particle size of the catalyst support.Then,the concentration changes of each substance at the outlet of the catalyst bed under different residence times were investigated.Moreover,the suitable reaction kinetics equations was derived using the Langmuir Hinshelwood-Hougen-Watson kinetic model.Finally,the activation energy for each reaction involved in the dimerization reaction was calculated.The activation energies of 4MP1,branched by-products,and 1-hexene were 115.0,150.8,and 177.4 kJ/mol,respectively.The effect of process conditions on propylene dimerization with solid base catalysts was studied through kinetic model simulation.By comparing the theoretical values obtained from the simulation with the experimental results,the applicability and accuracy of the kinetic model were verified. 展开更多
关键词 propylene dimerization 4-methyl-1-pentene intrinsic kinetics surface reaction
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Stability improvement of the Nieuwland catalyst in the dimerization of acetylene to monovinylacetylene 被引量:8
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作者 Jianguo Liu Yizan Zuo +2 位作者 Minghan Han Zhanwen Wang Dezheng Wang 《Journal of Natural Gas Chemistry》 EI CAS CSCD 2012年第5期495-500,共6页
In the process of dimerization of acetylene to produce monovinylacetylene (MVA),the loss of active component CuCl in the Nieuwland catalyst due to the formation of a dark red precipitate was investigated.The formula... In the process of dimerization of acetylene to produce monovinylacetylene (MVA),the loss of active component CuCl in the Nieuwland catalyst due to the formation of a dark red precipitate was investigated.The formula of the precipitate was CuCl·2C2H2·1/5NH 3,and it was presumed to be formed by the combination of NH 3,C2H2 and [Cu]-acetylene π-complex,which was an intermediate in the dimerization reaction.The addition of hydrochloric acid into the catalyst can reduce the formation of precipitate,whereas excessive H+ is unfavorable to the dimerization reaction of acetylene.To balance between high acetylene conversion and low loss rate of CuCl,the optimum mass percentage of HCl in the added hydrochloric acid was determined.The result showed the optimum mass percentage of HCl decreased from 5.0% to 3.2% when the space velocity of acetylene was from 140 h-1 to 360 h-1.The result in this work also indicated the pH of the Nieuwland catalyst should be kept in the range of 5.80-5.97 during the reaction process,which was good for both catalyst life and acetylene conversion. 展开更多
关键词 MONOVINYLACETYLENE dimerization reaction Nieuwland catalyst ACETYLENE STABILITY
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Effect of solvent on catalytic performance of anhydrous catalyst in acetylene dimerization to monovinylacetylene 被引量:6
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作者 Jianguo Liu Minghan Han Zhanwen Wang 《Journal of Energy Chemistry》 SCIE EI CAS CSCD 2013年第4期599-604,共6页
The production of monovinylacetylene (MVA) through Cu(I)-catalyzed acetylene dimerization reaction was performed in different reaction media. Based on the analyses of crystals precipitated from the catalyst soluti... The production of monovinylacetylene (MVA) through Cu(I)-catalyzed acetylene dimerization reaction was performed in different reaction media. Based on the analyses of crystals precipitated from the catalyst solution and UV-Vis spectra of the catalysts, the reaction mechanism and solvent dependence were studied. The highest yield of MVA can be obtained when dimethylformamide is used as solvent because of its strong coordination ability to Cu(I). The activation of C=C bond is presumed to be improved when the catalytic metal ion is coordinated by a solvent with less steric hindrance and electron-rich coordination atom. The results of the present study provide a possible way to accelerate the metal-catalyzed homogeneous reaction of alkyne substrates through careful selection of a solvent. 展开更多
关键词 tcetylene MONOVINYLACETYLENE dimerization reaction SOLVENT
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Exploring the specific role of GPCRs dimerization in drug discovery 被引量:1
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作者 蔡欣 陈京 白波 《Journal of Chinese Pharmaceutical Sciences》 CAS 2011年第6期535-541,共7页
G-protein-coupled receptors(GPCRs) are G-protein-coupled heptaspanning-membrane receptors.This group has thousands of members and is one of the important drug targets,accounting for 40%-50%of the drugs currently on ... G-protein-coupled receptors(GPCRs) are G-protein-coupled heptaspanning-membrane receptors.This group has thousands of members and is one of the important drug targets,accounting for 40%-50%of the drugs currently on the market.In the last decade,there has been a substantial re-evaluation of the assumption that GPCRs exist primarily as monomeric polypeptides, with support increasing for a model in which GPCRs can exist as homo- or hetero- dimers or even high-order oligomers.GPCRs dimers are hot research topics.Recent reports suggest that homo- or hetero- dimers exhibit "specific" functional properties which are distinct from monomeric receptors,involving agonist recognition,signaling,trafficking,and so on.Meanwhile,the occurrence of dimers with different pharmacological and signaling properties opens a completely new field in the search for novel drug targets useful to combat a variety of diseases and with potentially fewer side effects.In this paper,we will mainly review their specific structures and signal transduction,which help us reach for the high-hanging fruits in GPCRs drug discovery. 展开更多
关键词 G-protein-coupled receptors Receptor dimers Signal transduction Drug discovery
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The Erythropoietin Receptor: Dimerization and Intracellular Signal Transduction 被引量:4
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作者 WU Hong Harvey F Lodish(Whitehead Institute for Biomedical Research, Nine Cambridge Center Cambridge MA 02142 USA) (Department of Biology, Massachusetts Institute of Technology Cambridge MA 02139 USA) 《中国实验血液学杂志》 CAS CSCD 1996年第3期229-235,共7页
Erythropoietin (EPO), a 34 kD glycopro-tein, is the principal growth factor regulating theproduction of circulating erythrocytes; EPO isessential for committed CFU - E erythroid pro-genitors to divide several times an... Erythropoietin (EPO), a 34 kD glycopro-tein, is the principal growth factor regulating theproduction of circulating erythrocytes; EPO isessential for committed CFU - E erythroid pro-genitors to divide several times and then to dif-ferentiate into erythrocytes. Like most receptorsfor hematopoietic growth factors, the erythro-poietin receptor (EPO - R) is a type I trans-membrane protein and a member of the cytokinereceptor superfamily. These receptors containfour conserved cysteines and a Trp - Ser - X - 展开更多
关键词 ERYTHROPOIETIN ERYTHROPOIETIN RECEPTOR dimerization SIGNAL TRANSDUCTION
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(±)-6-3’a,7-6’-Isowallichilide:A pair of enantiomeric phthalide dimers from Ligusticum chuanxiong with new 6-3’a,7-6’ dimerization sites 被引量:3
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作者 Xin Fang Qiang Ma +1 位作者 Yi Feng Shuang Liang 《Chinese Chemical Letters》 SCIE CAS CSCD 2020年第5期1251-1253,共3页
(+)-6-3’a,7-6’-Isowallichilide and(-)-6-3’a,7-6’-isowallichilide,a pair of enantio meric phthalide dimers featuring new 6-3’a,7-6’dimerization sites,were isolated from Ligusticum chuanxiong.The structures were e... (+)-6-3’a,7-6’-Isowallichilide and(-)-6-3’a,7-6’-isowallichilide,a pair of enantio meric phthalide dimers featuring new 6-3’a,7-6’dimerization sites,were isolated from Ligusticum chuanxiong.The structures were elucidated by NMR spectroscopy and X-ray diffraction analysis.Furthermore,the absolute configurations were assigned using experimental and theoretical electronic circular dichroism methods.Their nitric oxide inhibition,antiplatelet aggregation and antioxidant activities were investigated. 展开更多
关键词 Ligusticum chuanxiong Phthalide dimers ENANTIOMERS dimerization sites
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Supramolecular Polymerization Driven by the Dimerization of Single-stranded Helix to Double-stranded Helix 被引量:2
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作者 Chao Zeng Chen-Yang Zhang +1 位作者 Jun-Yan Zhu Ze-Yuan Dong 《Chinese Journal of Polymer Science》 SCIE CAS CSCD 2018年第3期261-261,262-265,共5页
We reported a type of strong and highly directional non-covalent interactions based on the dimerization of single-stranded helix to double-stranded helix that can achieve supramolecular polymerization, giving rise to ... We reported a type of strong and highly directional non-covalent interactions based on the dimerization of single-stranded helix to double-stranded helix that can achieve supramolecular polymerization, giving rise to the formation of linear supramolecular polymers. 展开更多
关键词 HELIX Double-stranded helix Supramolecular polymers Supramolecular polymerization dimerization
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AIFM1 variants associated with auditory neuropathy spectrum disorder cause apoptosis due to impaired apoptosis-inducing factor dimerization 被引量:2
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作者 YUE QIU HONGYANG WANG +16 位作者 HUAYE PAN JING GUAN LEI YAN MINGJIE FAN HUI ZHOU XUANHAO ZHOU KAIWEN WU ZEXIAO JIA QIANQIAN ZHUANG ZHAOYING LEI MENGYAO LI XUE DING AIFU LIN YONG FU DONG ZHANG QIUJU WANG QINGFENG YAN 《Journal of Zhejiang University-Science B(Biomedicine & Biotechnology)》 SCIE CAS CSCD 2023年第2期172-184,共13页
Auditory neuropathy spectrum disorder(ANSD)represents a variety of sensorineural deafness conditions characterized by abnormal inner hair cells and/or auditory nerve function,but with the preservation of outer hair ce... Auditory neuropathy spectrum disorder(ANSD)represents a variety of sensorineural deafness conditions characterized by abnormal inner hair cells and/or auditory nerve function,but with the preservation of outer hair cell function.ANSD represents up to 15%of individuals with hearing impairments.Through mutation screening,bioinformatic analysis and expression studies,we have previously identified several apoptosis-inducing factor(AIF)mitochondria-associated 1(AIFM1)variants in ANSD families and in some other sporadic cases.Here,to elucidate the pathogenic mechanisms underlying each AIFM1 variant,we generated AIF-null cells using the clustered regularly interspersed short palindromic repeats(CRISPR)/CRISPR-associated protein 9(Cas9)system and constructed AIF-wild type(WT)and AIF-mutant(mut)(p.T260A,p.R422W,and p.R451Q)stable transfection cell lines.We then analyzed AIF structure,coenzyme-binding affinity,apoptosis,and other aspects.Results revealed that these variants resulted in impaired dimerization,compromising AIF function.The reduction reaction of AIF variants had proceeded slower than that of AIF-WT.The average levels of AIF dimerization in AIF variant cells were only 34.5%-49.7%of that of AIF-WT cells,resulting in caspase-independent apoptosis.The average percentage of apoptotic cells in the variants was 12.3%-17.9%,which was significantly higher than that(6.9%-7.4%)in controls.However,nicotinamide adenine dinucleotide(NADH)treatment promoted the reduction of apoptosis by rescuing AIF dimerization in AIF variant cells.Our findings show that the impairment of AIF dimerization by AIFM1 variants causes apoptosis contributing to ANSD,and introduce NADH as a potential drug for ANSD treatment.Our results help elucidate the mechanisms of ANSD and may lead to the provision of novel therapies. 展开更多
关键词 Auditory neuropathy spectrum disorder Apoptosis-inducing factor(AIF)mitochondria-associated 1(AIFM1)variants dimerization Caspase-independent apoptosis Nicotinamide adenine dinucleotide(NADH)treatment
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Tunable activity of electrocatalytic CO dimerization on strained Cu surfaces:Insights from ab initio molecular dynamics simulations 被引量:1
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作者 Hong Liu Jian Liu Bo Yang 《Chinese Journal of Catalysis》 SCIE EI CAS CSCD 2022年第11期2898-2905,共8页
Controlling catalytic activities through surface strain engineering remains a hot topic in electrocatalysis studies.Herein,ab initio molecular dynamics(AIMD)simulation associated with free energy sampling technology w... Controlling catalytic activities through surface strain engineering remains a hot topic in electrocatalysis studies.Herein,ab initio molecular dynamics(AIMD)simulation associated with free energy sampling technology were performed to study the energetics of the key step of producing C2 products in electrocatalytic reduction of CO or CO_(2),i.e.CO dimerization,on strained Cu(100)with an explicit aqueous solvent model.It is worth mentioning that when compressive strain reaches a certain extent,the surface of Cu(100)will undergo reconstruction.We showed that,from tensile to compressive strain,the free energy barrier of CO dimerization decreased,suggesting that the activity of CO dimerization increases.It was also found that some of the reconstructed surfaces showing the lowest free energy barriers but might be less stable can be stabilized in the presence of adsorbed O or CO.Upon detailed quantitative analysis on the charges of surface Cu atoms,we found that the free energy barriers were strongly correlated with the charge of Cu atoms where the OCCO intermediate adsorbs.When the surfaces structures of Cu(100)were altered under compressive strain,the electronic structure of surface Cu atoms was monitored and thus the activity of electrocatalytic CO dimerization can be tuned. 展开更多
关键词 Electrocatalytic CO dimerization Surface strain CU Surface reconstruction Ab initio molecular dynamics
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Photocatalytic hydrogen-evolution dimerization of styrenes to synthesize 1,2-dihydro-1-arylnaphthalene derivatives using Acr^+-Mes and cobaloxime catalysts 被引量:1
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作者 Wenxiao Cao Chengjuan Wu +4 位作者 Tao Lei Xiulong Yang Bin Chen Chenho Tung Lizhu Wu 《Chinese Journal of Catalysis》 SCIE EI CAS CSCD 北大核心 2018年第7期1194-1201,共8页
We report a hydrogen-evolution dimerization of styrenes via the synergistic merger of Acr+-Mes photocatalyst and cobaloxime proton reduction catalysts. By utilizing this dual catalyst system, 1,2-dihydro-1-arylnaphth... We report a hydrogen-evolution dimerization of styrenes via the synergistic merger of Acr+-Mes photocatalyst and cobaloxime proton reduction catalysts. By utilizing this dual catalyst system, 1,2-dihydro-1-arylnaphthalene derivatives can be directly constructed from commercially available styrenes. Our reaction proceeds smoothly under mild conditions without the need for oxidants or hydrogen atom transfer reagents, and the sole byproduct is hydrogen gas. Mechanistic investigation suggests that the reaction is initiated by photoinduced electron transfer under visible-light irradiation. 展开更多
关键词 Hydrogen-evolution dimerization Styrenes 1 2-Dihydro-1-arylnaphthalene derivatives Photocatalysis Cobaloxime catalysts
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Pleated polymeric foldamers driven by donor–acceptor interaction and conjugated radical cation dimerization 被引量:1
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作者 Yun-Chang Zhang Lan Chen +3 位作者 Hui Wang Ya-Ming Zhou Dan-Wei Zhang Zhan-Ting Li 《Chinese Chemical Letters》 SCIE CAS CSCD 2016年第6期817-821,共5页
Two naphthalene(NP) and bipyridinium(BIPY^2+) alternately incorporated polymers P1 and P2 have been prepared through the formation of dynamic hydrazone bonds. The polymers formed NP–BIPY^2+donor–acceptor inter... Two naphthalene(NP) and bipyridinium(BIPY^2+) alternately incorporated polymers P1 and P2 have been prepared through the formation of dynamic hydrazone bonds. The polymers formed NP–BIPY^2+donor–acceptor interaction-induced pleated secondary structure. Upon reducing the BIPY^2+units to radical cation BIPY+, intramolecular dimerization of the BIPY+units induced the backbones to afford another pleated secondary structure. Adding electron-rich macrocyclic polyether bis-1,5-dinaphtho[38]crown-10 or electron-deficient cyclobis(paraquat-p-phenylene) cyclophane did not break the first foldamer by complexing the BIPY^2+or NP units of the polymers, whereas the di(radical cationic)ring of the second cyclophane could break the second foldamer by forming threading complexes with the BIPY+units of the polymers. 展开更多
关键词 FOLDAMER Donor–acceptor interaction Conjugated radical cation dimerization BIPYRIDINIUM Dynamic covalent chemistry
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Influence of Molecular Structure on the Dimerization Reactivity of Germaaromatic Compounds: a Theoretical Study 被引量:1
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作者 王岩 曾小兰 +1 位作者 方德彩 张璐璐 《Chinese Journal of Structural Chemistry》 SCIE CAS CSCD 2012年第9期1365-1372,共8页
Density functional theory (DFT) calculations, at the B3LYP/6-311G** level of theory, were performed to study the reaction mechanism and potenti4the potential energy surface of the studied reactions was investigate... Density functional theory (DFT) calculations, at the B3LYP/6-311G** level of theory, were performed to study the reaction mechanism and potenti4the potential energy surface of the studied reactions was investigated. Our calculation results show that [2 + 2] and [4 + 4] reactions are concerted and synchronous processes; while [4 + 2] reactions proceed via a concerted but asynchronous way in general. [2 + 2] and [4 + 2] reactions of germabenzenes and 1-germana- phthalene proceed much more easily than the corresponding [4 + 4] reaction, both thermo- dynamically and kinetically; while most [4 + 2] paths have lower activation barrier than the corres- ponding [2 + 2] ones. As the number of six-membered aromatic rings in reactant molecules becomes larger, [2 + 2], [4 + 2] and [4 + 4] reactions become easier to proceed. The influence of substituents at the Ge atom of germabenzenes on the potential energy surface of [2 + 2] and [4 + 2] reactions correlates with their electronic properties and volume. Solvent effect is not crucial for the potential energy surfaces of the studied reactions. 展开更多
关键词 germaaromatic compound dimerization reaction reaction mechanism molecular structure density functional theory (DFT)
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Intrinsic Kinetic Modeling of Thermal Dimerization of C5 Fraction 被引量:4
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作者 Guo Liang Wang Tiefeng +1 位作者 Li Dongfeng Wang Jinfu 《China Petroleum Processing & Petrochemical Technology》 SCIE CAS 2016年第1期92-99,共8页
This work aims to investigate the intrinsic kinetics of thermal dimerization of C_5 fraction in the reactive distillation process. Experiments are conducted in an 1000-m L stainless steel autoclave under some selected... This work aims to investigate the intrinsic kinetics of thermal dimerization of C_5 fraction in the reactive distillation process. Experiments are conducted in an 1000-m L stainless steel autoclave under some selected design conditions. By means of the weighted least squares method, the intrinsic kinetics of thermal dimerization of C_5 fraction is established, and the corresponding pre-exponential factor as well as the activation energy are determined. For example, the pre-exponential factor A is equal to 4.39×105 and the activation energy E4 a is equal to 6.58×10J/mol for the cyclopentadiene dimerization reaction. The comparison between the experimental and calculated results shows that the kinetics model derived in this work is accurate and reliable, which can be used in the design of reactive distillation columns. 展开更多
关键词 steam cracking C5 fraction thermal dimerization intrinsic kinetics
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Garcinol suppresses the growth of human hepatocellular carcinoma by inducing abrogation of STAT3 phosphorylation,acetylation and dimerization
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作者 Muthu K SHANMUGAM Snehajyoti CHATTERJEE +8 位作者 Peramaiyan RAJENDRAN Feng LI Parijat SENAPATI Kwong Fai WONG Alan Prem KUMAR John MLUK Kam Man HUI Gautam SETHI Tapas K KUNDU 《中国药理学与毒理学杂志》 CAS CSCD 北大核心 2015年第S1期82-83,共2页
OBJECTIVE Hepatocellular carcinoma(HCC)is the fifth most common malignancy worldwide and the third cause of global cancer mortality.Activation of signal transducer and activator of transcription 3(STAT3)is commonly ob... OBJECTIVE Hepatocellular carcinoma(HCC)is the fifth most common malignancy worldwide and the third cause of global cancer mortality.Activation of signal transducer and activator of transcription 3(STAT3)is commonly observed in tumor cells and is a critical mediator of on cogenic signaling in HCC and controls the expression of several genes involved in proliferation,survival,metastasis and angiogenesis.Current drug-targeted therapies,besides being expensive,are associated with serious side effects and morbidity.Thus,novel agents that can suppress STAT3 activation have potential for both prevention and treatment of HCC.In the present report,we investigated whether the potent HAT/KAT inhibitor,garcinol,(apolyisoprenylatedbenzophenone),could suppress STAT3 activation in HCC cells and in nude mice model.METHODS The effect of garcinol on HCC cell lines wasdetermined by MTT assay,immunoblotting,DNA binding assays,immuno-fluorescenceand immune-histochemical analysis.The effect of garcinolon the inhibition of tumor growth in vivo was also investigated using HCCxenograft tumor modelin athymic nu/nu mice.RESULTS We found that garcinol could inhibit constitutive STAT3 activation in a dose-and time-dependent manner both by inhibiting STAT3 phosphorylation and acetylation in HCC cells.When investigated for molecular mechanism(s),we found that garcinol interferes with the dimer formation of STAT3 thereby inhibits its nuclear localization.Computational modeling showed that garcinol could bind to the SH2 domain of STAT3 and suppresses its dimerization in vitro.To understand the cellular mechanism(s)of inhibition of STAT3 function by garcinol,we observed that upon inhibition of STAT3 dimerization bygarcinol,STAT3 DNA binding ability gets repressed.The inhibition of STAT3 activation by garcinol led to the suppression of various gene products involved in proliferation,survival,and angiogenesis.Finally,when administered i.p.,garcinol inhibited the growth of human HCC xenograft tumors in athymic nu/nu mice.CONCLUSION Results frominvitroand in vivo studies suggest that garcinol exerts its anti-proliferative and pro-apoptotic effects through suppression of STAT3 signaling cascade in HCC by inhibiting its phosphorylation,acetylation and ultimately dimerization. 展开更多
关键词 STAT3 HCC GARCINOL ACETYLATION dimerization NUDE m
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Effect of Protein Dimerization on Ion Conductivity of Gramicidin A Channel Studied Using Polarizable Force Field
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作者 Jun-ben Weng Chen-yi Liao +3 位作者 Yan Li Ding-lin Zhang Guo-hui Li An-hui Wang 《Chinese Journal of Chemical Physics》 SCIE CAS CSCD 2021年第4期471-479,I0003,共10页
In studies of ion channel systems,due to the huge computational cost of polarizable force elds,classical force elds remain the most widely used for a long time.In this work,we used the AMOEBA polarizable atomic multip... In studies of ion channel systems,due to the huge computational cost of polarizable force elds,classical force elds remain the most widely used for a long time.In this work,we used the AMOEBA polarizable atomic multipole force eld in enhanced sampling simula-tions of single-channel gramicidin A(gA)and double-channel gA systems and investigated its reliability in characterizing ion-transport properties of the gA ion channel under dimer-ization.The inuence of gA dimerization on the permeation of potassium and sodium ions through the channel was described in terms of conductance,di usion coeffcient,and free energy pro le.Results from the polarizable force eld simulations show that the conductance of potassium and sodium ions passing through the single-and double-channel agrees well with experimental values.Further data analysis reveals that the molecular mechanism of protein dimerization a ects the ion-transport properties of gA channels,i.e.,protein dimer-ization accelerates the permeation of potassium and sodium ions passing through the double-channel by adjusting the environment around gA protein(the distribution of phospholipid head groups,ions outside the channel,and bulk water),rather than directly adjusting the conformation of gA protein. 展开更多
关键词 dimerization CONDUCTANCE Gramicidin A AMOEBA force eld Umbrella sampling
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Discussion on the dimerization reaction of penicillin antibiotics
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作者 Qizhang Wu Xia Zhang +1 位作者 Jiaxin Du Changqin Hu 《Journal of Pharmaceutical Analysis》 SCIE CAS CSCD 2022年第3期481-488,共8页
Penicillins are one type of the most important antibiotics used in the clinic.Control of drug impurity profiles is an important part of ensuring drug safety.This is particularly important in penicillins where polymeri... Penicillins are one type of the most important antibiotics used in the clinic.Control of drug impurity profiles is an important part of ensuring drug safety.This is particularly important in penicillins where polymerization can lead to polymers as elicitors of passive cutaneous anaphylaxis.The current understanding of penicillin polymerization is based on reactions with amino groups,but no comprehensive mechanistic understanding has been reported.Here,we used theoretical calculations and column switching-LC/MS techniques to study penicillin dimerization.Ampicillin and benzylpenicillin were selected as representative penicillins with or without amino groups in the side chain,respectively.We identified four pathways by which this may occur and the energy barrier graphs of each reaction process were given.For benzylpenicillin without an amino group in the 6-side chain,dimerization mode A is the dominant mode,where the 2-carboxyl group of one molecule reacts with the b-lactam of another molecule.However,ampicillin with an amino group in the 6-side chain favors dimerization mode C,where the amino group of one molecule attacks the b-lactam of another molecule.These findings can lead to a polymer control approach to maintaining penicillin antibiotics in an active formulation. 展开更多
关键词 PENICILLINS dimerization reaction Theoretical calculations LC/MS
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A study of the lipid-mediated dimerization of the RAGE TM+JM domains by molecular dynamic simulations
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作者 Jialin Chen Fude Sun +3 位作者 Peng Chen Mengya Chai Lida Xu Shi-Zhong Luo 《Chinese Chemical Letters》 SCIE CAS CSCD 2018年第7期1151-1154,共4页
Receptor for Advanced Glycation End-products(RAGE) binds to a number of ligand families to display important roles in hyperglycemia, senescence, inflammation, neurodegeneration and cancer. It is reported that RAGE reg... Receptor for Advanced Glycation End-products(RAGE) binds to a number of ligand families to display important roles in hyperglycemia, senescence, inflammation, neurodegeneration and cancer. It is reported that RAGE regulates the related biological processes via homo-dimerization by the transmembrane(TM) domain, and evidence further shows that the intracellular domain of RAGE has an influence on the dimerization activity of RAGE. In this study, we explored the underlying interaction mechanism of RAGE TM domains by multiscale coarse-grained(CG) dynamic simulations. Two switching packing modes of the TM dimeric conformations were observed. Through a series of site-directed mutations, we further emphasized the key roles of the A342xxxG346xxG349xxxT353xxL356xxxV360motif in the left-handed configuration and the L345xxxG349xxG352xxxL356motif in the right-handed configuration. In addition, we revealed that the juxtamembrane(JM) domain within JM-A375 can determine the RAGE TM dimeric structure. Overall, we provide the molecular insights into the switching dimerization of RAGE TM domains, as well as the regulation from the JM domains mediated by the anionic lipids. 展开更多
关键词 RAGE dimerization TM+JM domains Lipid Regulation Coarse-grained simulations
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The effect of dimerization on the magnetoresistance in organic spin valves
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作者 王辉 胡贵超 任俊峰 《Chinese Physics B》 SCIE EI CAS CSCD 2013年第5期614-619,共6页
The effect of lattice dimerization on the magnetoresistance (MR) in organic spin valves is investigated based on the Su-Schrieffer-Heeger (SSH) model and the Green's function method. By comparing with the results... The effect of lattice dimerization on the magnetoresistance (MR) in organic spin valves is investigated based on the Su-Schrieffer-Heeger (SSH) model and the Green's function method. By comparing with the results for a uniform chain, we find that the dimerization of the molecular chain modifies the monotonic dependence of the MR on the bias to an oscillatory one. A sign inversion of the MR is observed when the amplitude of the dimerization is adjusted. The results also show that at a low bias, the MR through a dimerized chain decreases with the increasing bias as well as the increasing chain length, which is consistent with the experimental reports. A further understanding can be achieved by analyzing the electronic states and the spin-dependent transmission spectrum with the parallel and antiparallel magnetization orientations of the two ferromagnetic electrodes. 展开更多
关键词 organic spintronics MAGNETORESISTANCE dimerization
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