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Molecular Identification of a Fungal Pathogen <i>Batrachochytrium dendrobatidis</i>and Its Impact on Urbanized New Jersey
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作者 Tin-Chun Chu Meiyin Wu +3 位作者 Lauren Pohren Bobak Haghjoo Christina Soman Lee H. Lee 《Advances in Microbiology》 2014年第16期1164-1173,共10页
In urban landscape, amphibians face many challenges in order to sustain their populations, such as road mortality and infection of pathogenic Batrachochytrium dendrobatidis (Bd). Bd infection has been reported to caus... In urban landscape, amphibians face many challenges in order to sustain their populations, such as road mortality and infection of pathogenic Batrachochytrium dendrobatidis (Bd). Bd infection has been reported to cause significant mortality;however, its current distribution in the state of New Jersey remains unknown. In spring, amphibians emerge from their wintering group and migrate to nearby breeding ponds or vernal pools. Their migration pathway is often intercepted by the dense network of human transportation which leads to extirpation. This study aims to investigate potential mortality caused by human transportation and the infected rate of Bd fungus on the amphibian populations at a suburban area in central New Jersey. Twenty-four pitfall traps were installed to collect amphibians. A total of 687 organisms representing 7 amphibian species were recorded during the 73-day study period. Four of the 7 species were selected to test for Bd infection;73.6% of the amphibian skin swabs showed positive results of infection. However, Bd was not detected in water and soil samples collected around the study areas. The results of this study suggested that road mortality and pathogenic Bd might have tremendously impacted the urban amphibian populations and might have been the major causes of the current trend of amphibian population decline, particularly in the urban area. 展开更多
关键词 AMPHIBIAN HABITAT FRAGMENTATION Batrachochytrium dendrobatidis Bd HABITAT CONNECTIVITY
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A survey for Batrachochytrium salamandrivorans in Chinese amphibians
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作者 Wei ZHU Feng XU +7 位作者 Changming BAI Xuan LIU Supen WANG Xu GAO Shaofei YAN Xianping LI Zetian LIU Yiming LI 《Current Zoology》 SCIE CAS CSCD 2014年第6期729-735,共7页
For the last decade, chytridiomycosis was considered to be caused by a single species of fungus, Batrachochytrium dendrobatidis (Bd), but a second chytrid species, Batrachochytrium salamandrivorans (Bs), was recen... For the last decade, chytridiomycosis was considered to be caused by a single species of fungus, Batrachochytrium dendrobatidis (Bd), but a second chytrid species, Batrachochytrium salamandrivorans (Bs), was recently isolated from an in- fected Salamandra salamandra in the Netherlands. To date, Bs has only been found in the Netherlands. To assess whether Bs is present in China, we analyzed a total of 665 samples, including 425 wild samples, 41 preserved specimens, and 199 captive sam- pies, from 30 different species, including both urodeles and anurans. Our sample sites covered 15 provinces in China. All of the samples tested negative for Bs, resulting in a 95% confidence limit for a prevalence of 0.6%. The absence of Bs observed in this large-scale survey in China has significant implications for amphibian conservation and for border trade management strategies intended to control amphibian diseases. We strongly recommend the continued close monitoring of Bs to verify the status of this potentially devastating amphibian fungus in China . 展开更多
关键词 Amphibian decline ASIA Batrachochytrium salamandrivorans China CHYTRIDIOMYCOSIS Batrachochytrium dendrobatidis.
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两栖类壶菌病3种PCR鉴定方法与比较
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作者 李斌 黄艳 +1 位作者 王宇 邵晨 《安徽农业科学》 CAS 2015年第11期32-34,49,共4页
壶菌病是一种新型的由蛙壶菌感染所引起的两栖动物传染疾病,其快速的传染性和广泛的暴发性导致两栖类物种的大面积灭绝,对全球两栖动物的生存产生了巨大影响。介绍了3种鉴定蛙壶菌的PCR方法:常规PCR、巢式PCR和实时定量PCR,并对这3种方... 壶菌病是一种新型的由蛙壶菌感染所引起的两栖动物传染疾病,其快速的传染性和广泛的暴发性导致两栖类物种的大面积灭绝,对全球两栖动物的生存产生了巨大影响。介绍了3种鉴定蛙壶菌的PCR方法:常规PCR、巢式PCR和实时定量PCR,并对这3种方法进行分析与比较。 展开更多
关键词 壶菌病 蛙壶菌 两栖动物 PCR
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蟾蜍壶菌病病原遗传分化研究 被引量:1
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作者 曾朝辉 白世卓 +1 位作者 朱蕴绮 王晓龙 《经济动物学报》 CAS 2011年第3期160-163,共4页
壶菌病为近年发现的两栖类动物重要传染病,对野生和养殖种群危害极大,为确定药用经济动物蟾蜍历史上壶菌病感染情况,提高养殖蟾蜍疾病防治水平,选取某博物馆馆藏采集于四川的蟾蜍标本32只,利用Taqman-MGB荧光探针定量PCR技术进行壶菌检... 壶菌病为近年发现的两栖类动物重要传染病,对野生和养殖种群危害极大,为确定药用经济动物蟾蜍历史上壶菌病感染情况,提高养殖蟾蜍疾病防治水平,选取某博物馆馆藏采集于四川的蟾蜍标本32只,利用Taqman-MGB荧光探针定量PCR技术进行壶菌检测,并对定量PCR产物克隆、测序,通过序列比对和系统发育分析判定其来源。最终得到定量PCR标准曲线:Y=-3.0X+32.39;相关系数R2=0.999 6;检测结果为阳性样本12只,检出率37.5%。同时系统发育分析表明,我国的壶菌存在一定程度的分化,一类与北美洲、南美洲、欧洲菌株呈现高度的亲缘关系;另一类则表现出与世界其他地区分布的壶菌有明显的不同,显示其独特性。这提示我国蟾蜍壶菌病的防制应更具针对性,不可盲目照搬国外经验。 展开更多
关键词 蟾蜍 馆藏标本 壶菌 实时PCR 系统发育分析
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馆藏泽蛙标本壶菌病原实时PCR检测与系统发育分析 被引量:1
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作者 曾朝辉 白世卓 +1 位作者 朱蕴绮 王晓龙 《经济动物学报》 CAS 2012年第3期168-171,共4页
为研究、验证我国两栖类壶菌病的历史疫情,从时间和系统进化角度追溯壶菌的来源,该研究选取北京自然博物馆馆藏1982年采集于广东的泽蛙标本39只,利用Taqman-MGB荧光探针定量PCR技术进行壶菌检测,并对定量PCR产物克隆、测序,通过序列比... 为研究、验证我国两栖类壶菌病的历史疫情,从时间和系统进化角度追溯壶菌的来源,该研究选取北京自然博物馆馆藏1982年采集于广东的泽蛙标本39只,利用Taqman-MGB荧光探针定量PCR技术进行壶菌检测,并对定量PCR产物克隆、测序,通过序列比对和系统发育分析判定其来源。最终得到定量PCR标准曲线:Y=-3.1X+32.65;相关系数R2=0.999 8;检测结果为阳性样本12只,检出率30.8%;同时系统发育分析表明,我国的壶菌存在一定程度的分化,一类与北美洲、南美洲、欧洲菌株呈现高度的亲缘关系;另一类则表现出与世界其他地区分布的壶菌有明显的不同,显示为独特类型。该研究把我国壶菌感染的最早记录推进到了20世纪80年代初期。 展开更多
关键词 泽蛙 馆藏标本 壶菌 实时PCR 系统发育分析
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蛙壶菌潜在分布区及其风险因素预测与分析 被引量:1
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作者 别佳 沙龙倩 阎建余 《中国畜牧兽医》 CAS CSCD 北大核心 2024年第2期728-735,共8页
[目的]壶菌病是一种由蛙壶菌(Batrachochytrium dendrobatidis)感染导致的疾病,在近半个多世纪的时间里,是导致两栖动物种群数量大量减少甚至灭绝的主要原因之一。目前,壶菌病尚没有行之有效的治疗方法,因此,对世界范围内蛙壶菌的分布... [目的]壶菌病是一种由蛙壶菌(Batrachochytrium dendrobatidis)感染导致的疾病,在近半个多世纪的时间里,是导致两栖动物种群数量大量减少甚至灭绝的主要原因之一。目前,壶菌病尚没有行之有效的治疗方法,因此,对世界范围内蛙壶菌的分布与传播进行调查研究,分析蛙壶菌在世界和区域尺度的分布风险及影响因素,可为其预防措施的制定提供基础研究资料。[方法]使用蛙壶菌在世界范围内的分布数据,共考虑了20个气候环境变量,经过对蛙壶菌分布数据和变量进行筛选,建立最大熵模型,比较纳入模型的6个变量与蛙壶菌分布风险的关系,并预测蛙壶菌在世界范围和中国大陆的分布风险。[结果]变量中对蛙壶菌分布概率贡献度最高的前4位依次为年平均气温、年降水量、温度季节性、降水季节性。蛙壶菌分布概率与年平均气温和温度季节性总体均呈先正相关后负相关,与年降水量和降水季节性分别呈正相关和负相关。蛙壶菌全球分布的高风险地区主要在中国大陆南部、澳大利亚东南部、巴布亚新几内亚中部、瑞典南部、德国、波兰、罗马尼亚、英国南部、爱尔兰、法国、马达加斯加东部、苏丹、美国南部、秘鲁东部、埃塞俄比亚和日本等。其在中国大陆分布的高风险区域主要集中在广东北部、广西中部和北部、云南、贵州、湖南、江西、福建、浙江、江苏南部、安徽南部、湖北南部、重庆、四川东部及南部、陕西南部等地区。[结论]蛙壶菌的分布与气温和降水关系密切,其在全球分布的高风险地区主要在欧洲、非洲南部和北美洲南部,在中国大陆分布的高风险区域主要集中在华中、华东、华南地区和西南地区的东南部。 展开更多
关键词 蛙壶菌 最大熵模型 风险预测 两栖动物 气象因素
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Environmental factors and host sex influence the skin microbiota structure of Hong Kong newt (Paramesotriton hongkongensis) in a coldspot of chytridiomycosis in subtropical East Asia
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作者 Bowen WAN Guoling CHEN +3 位作者 Emily Shui Kei POON Hon Shing FUNG Anthony LAU Simon Yung Wa SIN 《Integrative Zoology》 2025年第2期236-255,共20页
Chytridiomycosis,an infectious skin disease caused by the chytrid fungi,Batrachochytrium dendrobatidis and B.salamandrivorans,poses a significant threat to amphibian biodiversity worldwide.Antifungal bacteria found on... Chytridiomycosis,an infectious skin disease caused by the chytrid fungi,Batrachochytrium dendrobatidis and B.salamandrivorans,poses a significant threat to amphibian biodiversity worldwide.Antifungal bacteria found on the skin of chytrid-resistant amphibians could potentially provide defense against chytridiomycosis and lower mortality rates among resistant individuals.The Hong Kong newt(Paramesotriton hongkongensis)is native to East Asia,a region suspected to be the origin of chytrids,and has exhibited asymptomatic infection,suggesting a long-term coexistence with the chytrids.Therefore,the skin microbiota of this resistant species warrant investigation,along with other factors that can affect the microbiota.Among the 149 newts sampled in their natural habitats in Hong Kong,China,putative antifungal bacteria were found in all individuals.There were 314 amplicon sequence variants distributed over 25 genera of putative antifungal bacteria;abundant ones included Acinetobacter,Flavobacterium,and Novosphingobium spp.The skin microbiota compositions were strongly influenced by the inter-site geographical distances.Despite inter-site differences,we identified some core skin microbes across sites that could be vital to P.hongkongensis.The dominant cores included the family Comamonadaceae,family Chitinophagaceae,and class Betaproteobacteria.Moreover,habitat elevation and host sex also exhibited significant effects on skin microbiota compositions.The antifungal bacteria found on these newts offer an important resource for conservation against chytridiomycosis,such as developing probiotic treatments for susceptible species. 展开更多
关键词 16S amplicon sequencing antifungal bacteria Batrachochytrium dendrobatidis Batrachochytrium salamandrivorans host-pathogen-microbiota coevolution
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Review and synthesis of the effects of climate change on amphibians 被引量:8
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作者 Yiming LI Jeremy M.COHEN Jason R.ROHR 《Integrative Zoology》 SCIE CSCD 2013年第2期145-161,共17页
Considerable progress has been made in understanding the responses of amphibians to climate change,with successful research carried out on climate change-associated shifts in amphibian phenology,elevational distributi... Considerable progress has been made in understanding the responses of amphibians to climate change,with successful research carried out on climate change-associated shifts in amphibian phenology,elevational distributions and amphibian-parasite interactions.We review and synthesize the literature on this topic,emphasizing acutely lethal,sublethal,indirect and positive effects of climate change on amphibians,and major research gaps.For instance,evidence is lacking on poleward shifts in amphibian distributions and on changes in body sizes and morphologies of amphibians in response to climate change.We have limited information on amphibian thermal tolerances,thermal preferences,dehydration breaths,opportunity costs of water conserving behaviors and actual temperature and moisture ranges amphibians experience.Even when much of this information is available,there remains little evidence that climate change is acutely lethal to amphibians.This suggests that if climate change is contributing to declines,it might be through effects that are not acutely lethal,indirect,or both,but evidence in support of this suggestion is necessary.In fact,evidence that climate change is directly contributing to amphibian declines is weak,partly because researchers have not often ruled out alternative hypotheses,such as chytrid fungus or climate-fungus interactions.Consequently,we recommend that amphibian-climate research shift from primarily inductive,correlational approach as to studies that evaluate alternative hypotheses for declines.This additional rigor will require interdisciplinary collaborations,estimates of costs and benefits of climate change to amphibian fitness and populations,and the integration of correlative field studies,experiments on‘model’amphibian species,and mathematical and functional,physiological models. 展开更多
关键词 amphibian decline Batrachochytrium dendrobatidis breeding date climate-linked epidemic hypothesis global warming
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Effects of temperature and hydric environment on survival of the Panamanian Golden Frog infected with a pathogenic chytrid fungus
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作者 Heidi M.BUSTAMANTE Lauren J.LIVO Cynthia CAREY 《Integrative Zoology》 SCIE CSCD 2010年第2期143-153,共11页
Considerable controversy exists concerning whether or not climate changes(particularly global warming)are causing outbreaks of a lethal amphibian pathogen,the chytrid fungus Batrachochytrium dendrobatidis(Longcore,Pes... Considerable controversy exists concerning whether or not climate changes(particularly global warming)are causing outbreaks of a lethal amphibian pathogen,the chytrid fungus Batrachochytrium dendrobatidis(Longcore,Pessier&D.K.Nichols 1999).In the present study,groups of Panamanian golden frogs(Atelopus zeteki Dunn,1993),a critically endangered amphibian thought to be nearly extinct in Panama,were exposed to varying dosages of zoospores of Batrachochytrium dendrobatidis,temperatures and hydric environments in order to learn whether this species is susceptible to this pathogen and,if so,how environmental factors affect survival.This pathogen proved to be highly lethal for A.zeteki.Frogs exposed to a dosage of 100 Bd zoospores survived significantly(P<0.0001)longer than those that had been exposed to 104 or 106 zoospores.Exposed frogs housed at 23℃survived significantly(P<0.0001)longer than those that were housed at 17℃.Exposed frogs held in dry conditions survived significantly longer than those in wet conditions(P<0.0001).As a laboratory study,these results do not directly test hypotheses about the relation between climate change and the decline of these frogs in the field,but they inform the discussion about how environmental conditions can have an impact on the interaction between a susceptible amphibian and this pathogen.These data do not support the contention that rising global temperatures are necessary to cause the death of amphibians infected with this pathogen because the pathogen was equally lethal at 17 as at 23℃,and frogs at the warmer temperature lived significantly longer than those at the cooler one. 展开更多
关键词 amphibian declines Atelopus zeteki Batrachochytrium dendrobatidis CHYTRIDIOMYCOSIS climatelinked-epidemic hypothesis
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