It is known that correlation does not imply causality.Some relationships identified in the analysis of data are coincidental or unknown,and some are produced by real-world causality of the situation,which is problemat...It is known that correlation does not imply causality.Some relationships identified in the analysis of data are coincidental or unknown,and some are produced by real-world causality of the situation,which is problematic,since there is a need to differentiate between these two scenarios.Until recently,the proper−semantic−causality of the relationship could have been determined only by human experts from the area of expertise of the studied data.This has changed with the advance of large language models,which are often utilized as surrogates for such human experts,making the process automated and readily available to all data analysts.This motivates the main objective of this work,which is to introduce the design and implementation of a large language model-based semantic causality evaluator based on correlation analysis,together with its visual analysis model called Causal heatmap.After the implementation itself,the model is evaluated from the point of view of the quality of the visual model,from the point of view of the quality of causal evaluation based on large language models,and from the point of view of comparative analysis,while the results reached in the study highlight the usability of large language models in the task and the potential of the proposed approach in the analysis of unknown datasets.The results of the experimental evaluation demonstrate the usefulness of the Causal heatmap method,supported by the evident highlighting of interesting relationships,while suppressing irrelevant ones.展开更多
AIM:To clarify the clinical correlations and causal relationships between lipid metabolism and the progression of thyroid-associated ophthalmopathy(TAO).METHODS:This case-control study retrieved clinical data from 201...AIM:To clarify the clinical correlations and causal relationships between lipid metabolism and the progression of thyroid-associated ophthalmopathy(TAO).METHODS:This case-control study retrieved clinical data from 2018 to 2023.A total of 2591 patients were enrolled,including 197 patients with TAO(case group)and 2394 patients with hyperthyroidism without TAO(control group).Serum lipid parameters,including triglycerides,total cholesterol,high-density lipoprotein(HDL),low-density lipoprotein(LDL),and the HDL/total cholesterol ratio,as well as thyroid function markers,were compared between the two groups.Correlation analyses were performed to evaluate the associations between serum lipid levels and key ocular manifestations of TAO,including exophthalmos degree,clinical activity score,and disease severity.Furthermore,Mendelian randomization(MR)analysis was conducted using genome-wide association study(GWAS)datasets,with hyperthyroidism as the exposure variable and serum lipid parameters as the outcome variables,to infer the causal relationship between hyperthyroidism,lipid metabolism,and TAO progression.RESULTS:The TAO group consisted of 101 males and 96 females,while the hyperthyroidism group included 706 males and 1688 females.Compared with the control group,patients with TAO had significantly higher levels of triglycerides(1.83±1.21 vs 1.40±1.08 mmol/L,P<0.01),total cholesterol,LDL,and HDL.Correlation analysis showed that triglyceride levels were positively correlated with exophthalmos degree,whereas HDL levels were inversely correlated with exophthalmos degree.No significant associations were found between serum lipid levels and clinical activity score(P>0.1).MR analysis confirmed that hyperthyroidism exerted a causal effect in reducing serum triglycerides[inverse-variance weighting odds ratio(OR)=0.035,95%confidence interval(CI):0.01-0.12]and total cholesterol(OR=0.085,95%CI:0.02-0.34),with no evidence of horizontal pleiotropy(MR-PRESSO P>0.05).CONCLUSION:Elevated serum triglyceride levels are an independent risk factor for TAO severity,especially exophthalmos,and triglyceride metabolism is inversely regulated by thyroid function.展开更多
Liquid rocket engine(LRE)fault diagnosis is critical for successful space launch missions,enabling timely avoidance of safety hazards,while accurate post-failure analysis prevents subsequent economic losses.However,th...Liquid rocket engine(LRE)fault diagnosis is critical for successful space launch missions,enabling timely avoidance of safety hazards,while accurate post-failure analysis prevents subsequent economic losses.However,the complexity of LRE systems and the“black-box”nature of current deep learning-based diagnostic methods hinder interpretable fault diagnosis.This paper establishes Granger causality(GC)extraction-based component-wise multi-layer perceptron(GCMLP),achieving high fault diagnosis accuracy while leveraging GC to enhance diagnostic interpretability.First,component-wise MLP networks are constructed for distinct LRE variables to extract inter-variable GC relationships.Second,dedicated predictors are designed for each variable,leveraging historical data and GC relationships to forecast future states,thereby ensuring GC reliability.Finally,the extracted GC features are utilized for fault classification,guaranteeing feature discriminability and diagnosis accuracy.This study simulates six critical fault modes in LRE using Simulink.Based on the generated simulation data,GCMLP demonstrates superior fault localization accuracy compared to benchmark methods,validating its efficacy and robustness.展开更多
The isotope effect on zonal flows(ZFs)and turbulence remains a key issue that is not completely solved in fusion plasmas.This paper presents the first experimental results of the ab initio prediction of causal relatio...The isotope effect on zonal flows(ZFs)and turbulence remains a key issue that is not completely solved in fusion plasmas.This paper presents the first experimental results of the ab initio prediction of causal relation between geodesic acoustic mode(GAM)and ambient turbulence at different isotope masses in the edge of HL-2A tokamak,where transfer entropy method based on information-theoretical approach is utilized as a quantified indicator of causality.Analysis shows that GAM is more pronounced in deuterium plasmas than in hydrogen,leading to a lower heat transport as well as more peaked profiles in the former situation.The causal impact of GAM on conductive heat flux component is stronger than on the convective component,which is resulted from a larger causal influence of zonal flow on temperature fluctuation.While a stronger GAM in deuterium plasmas has larger influence on all flux components,the relative change in temperature fluctuation and coefficient is more obvious when the ion mass varies.These findings not only offer an in-depth understanding of the real causality between zonal flow and turbulence in the present isotope experiments,but also provide useful ways for the physical understandings of transport and zonal flow dynamics in future deuterium-tritium fusion plasmas.展开更多
Hemorrhagic stroke,the second leading cause of stroke,is a severe medical emergency that often leads to severe disability or death;however,the causal relationship between antibody-mediated immune responses and hemorrh...Hemorrhagic stroke,the second leading cause of stroke,is a severe medical emergency that often leads to severe disability or death;however,the causal relationship between antibody-mediated immune responses and hemorrhagic stroke remains unknown.This study aimed to investigate the potential causal relationship between antibody-mediated immune responses to infectious agents and hemorrhagic stroke using the two-sample Mendelian randomization(MR)method.Comprehensive analyses were conducted using publicly available data from genome-wide association study(GWAS),which involved the whole genomes of 9724 European participants and 46 antibody measurement phenotypes,and summary statistics from the FinnGen dataset R12(including intracerebral hemorrhage and subarachnoid hemorrhage)were used.The causal relationship between the aforementioned immune responses and hemorrhagic stroke was analyzed using inverse-variance weighting,MR-Egger regression,weighted median,weighted mode,simple mode,and MR-pleiotropy residual sum and outlier(MR-PRESSO),while various sensitivity analyses were performed to assess heterogeneity and pleiotropy in the study findings.Results showed that human herpes virus 7(HHV-7)U14 antibody levels(OR:0.877,95%CI:0.797-0.964,P=0.007)exerted a protective effect against hemorrhagic stroke,and Chlamydia trachomatis(CT)tarp-D F2 antibody levels(OR:0.937,95%CI:0.885-0.992,P=0.025)had a potential protective effect;additionally,Epstein-Barr virus(EBV)ZEBRA antibody levels(OR:1.062,95%CI:1.012-1.114,P=0.014),human herpesvirus 6(HHV-6)p101k antibody levels(OR:1.054,95%CI:1.002-1.108,P=0.042),and cytomegalovirus(CMV)pp150 antibody levels(OR:1.086,95%CI:1.002-1.176,P=0.045)were potential risk factors for the disease.No significant pleiotropy or heterogeneity was observed in any of the MR analyses.Collectively,these findings confirmed a significant causal relationship between antibody-mediated immune responses and hemorrhagic stroke,and this study contributed to a deeper understanding of the potential mechanisms underlying hemorrhagic stroke onset.展开更多
基金supported by University Grant Agency of Matej Bel University in Banská Bystrica project number UGA-14-PDS-2025.
文摘It is known that correlation does not imply causality.Some relationships identified in the analysis of data are coincidental or unknown,and some are produced by real-world causality of the situation,which is problematic,since there is a need to differentiate between these two scenarios.Until recently,the proper−semantic−causality of the relationship could have been determined only by human experts from the area of expertise of the studied data.This has changed with the advance of large language models,which are often utilized as surrogates for such human experts,making the process automated and readily available to all data analysts.This motivates the main objective of this work,which is to introduce the design and implementation of a large language model-based semantic causality evaluator based on correlation analysis,together with its visual analysis model called Causal heatmap.After the implementation itself,the model is evaluated from the point of view of the quality of the visual model,from the point of view of the quality of causal evaluation based on large language models,and from the point of view of comparative analysis,while the results reached in the study highlight the usability of large language models in the task and the potential of the proposed approach in the analysis of unknown datasets.The results of the experimental evaluation demonstrate the usefulness of the Causal heatmap method,supported by the evident highlighting of interesting relationships,while suppressing irrelevant ones.
基金Supported by the National Natural Science Foundation of China(No.82371104)the Natural Science Foundation of Hunan Province(No.2023JJ30851).
文摘AIM:To clarify the clinical correlations and causal relationships between lipid metabolism and the progression of thyroid-associated ophthalmopathy(TAO).METHODS:This case-control study retrieved clinical data from 2018 to 2023.A total of 2591 patients were enrolled,including 197 patients with TAO(case group)and 2394 patients with hyperthyroidism without TAO(control group).Serum lipid parameters,including triglycerides,total cholesterol,high-density lipoprotein(HDL),low-density lipoprotein(LDL),and the HDL/total cholesterol ratio,as well as thyroid function markers,were compared between the two groups.Correlation analyses were performed to evaluate the associations between serum lipid levels and key ocular manifestations of TAO,including exophthalmos degree,clinical activity score,and disease severity.Furthermore,Mendelian randomization(MR)analysis was conducted using genome-wide association study(GWAS)datasets,with hyperthyroidism as the exposure variable and serum lipid parameters as the outcome variables,to infer the causal relationship between hyperthyroidism,lipid metabolism,and TAO progression.RESULTS:The TAO group consisted of 101 males and 96 females,while the hyperthyroidism group included 706 males and 1688 females.Compared with the control group,patients with TAO had significantly higher levels of triglycerides(1.83±1.21 vs 1.40±1.08 mmol/L,P<0.01),total cholesterol,LDL,and HDL.Correlation analysis showed that triglyceride levels were positively correlated with exophthalmos degree,whereas HDL levels were inversely correlated with exophthalmos degree.No significant associations were found between serum lipid levels and clinical activity score(P>0.1).MR analysis confirmed that hyperthyroidism exerted a causal effect in reducing serum triglycerides[inverse-variance weighting odds ratio(OR)=0.035,95%confidence interval(CI):0.01-0.12]and total cholesterol(OR=0.085,95%CI:0.02-0.34),with no evidence of horizontal pleiotropy(MR-PRESSO P>0.05).CONCLUSION:Elevated serum triglyceride levels are an independent risk factor for TAO severity,especially exophthalmos,and triglyceride metabolism is inversely regulated by thyroid function.
文摘Liquid rocket engine(LRE)fault diagnosis is critical for successful space launch missions,enabling timely avoidance of safety hazards,while accurate post-failure analysis prevents subsequent economic losses.However,the complexity of LRE systems and the“black-box”nature of current deep learning-based diagnostic methods hinder interpretable fault diagnosis.This paper establishes Granger causality(GC)extraction-based component-wise multi-layer perceptron(GCMLP),achieving high fault diagnosis accuracy while leveraging GC to enhance diagnostic interpretability.First,component-wise MLP networks are constructed for distinct LRE variables to extract inter-variable GC relationships.Second,dedicated predictors are designed for each variable,leveraging historical data and GC relationships to forecast future states,thereby ensuring GC reliability.Finally,the extracted GC features are utilized for fault classification,guaranteeing feature discriminability and diagnosis accuracy.This study simulates six critical fault modes in LRE using Simulink.Based on the generated simulation data,GCMLP demonstrates superior fault localization accuracy compared to benchmark methods,validating its efficacy and robustness.
基金supported by the National MCF Energy Research and Development Program(Grant Nos.2024YFE03190001,2024YFE03190004,2022YFE03030001,and 2019YFE03030002)the National Natural Science Foundation of China(Grant Nos.12405257,12475215,and 12475219)+2 种基金the Natural Science Foundation of Sichuan Province,China(Grant Nos.2023NSFSC1289 and 2025ZNSFSC0066)the Nuclear Technology Research and Development Program(Grant No.HJSYF2024(02))the Innovation Program of Southwestern Institute of Physics(Grant No.202301XWCX001)。
文摘The isotope effect on zonal flows(ZFs)and turbulence remains a key issue that is not completely solved in fusion plasmas.This paper presents the first experimental results of the ab initio prediction of causal relation between geodesic acoustic mode(GAM)and ambient turbulence at different isotope masses in the edge of HL-2A tokamak,where transfer entropy method based on information-theoretical approach is utilized as a quantified indicator of causality.Analysis shows that GAM is more pronounced in deuterium plasmas than in hydrogen,leading to a lower heat transport as well as more peaked profiles in the former situation.The causal impact of GAM on conductive heat flux component is stronger than on the convective component,which is resulted from a larger causal influence of zonal flow on temperature fluctuation.While a stronger GAM in deuterium plasmas has larger influence on all flux components,the relative change in temperature fluctuation and coefficient is more obvious when the ion mass varies.These findings not only offer an in-depth understanding of the real causality between zonal flow and turbulence in the present isotope experiments,but also provide useful ways for the physical understandings of transport and zonal flow dynamics in future deuterium-tritium fusion plasmas.
基金Supported by the National Natural Science Foundations of China(82271340,82071368)。
文摘Hemorrhagic stroke,the second leading cause of stroke,is a severe medical emergency that often leads to severe disability or death;however,the causal relationship between antibody-mediated immune responses and hemorrhagic stroke remains unknown.This study aimed to investigate the potential causal relationship between antibody-mediated immune responses to infectious agents and hemorrhagic stroke using the two-sample Mendelian randomization(MR)method.Comprehensive analyses were conducted using publicly available data from genome-wide association study(GWAS),which involved the whole genomes of 9724 European participants and 46 antibody measurement phenotypes,and summary statistics from the FinnGen dataset R12(including intracerebral hemorrhage and subarachnoid hemorrhage)were used.The causal relationship between the aforementioned immune responses and hemorrhagic stroke was analyzed using inverse-variance weighting,MR-Egger regression,weighted median,weighted mode,simple mode,and MR-pleiotropy residual sum and outlier(MR-PRESSO),while various sensitivity analyses were performed to assess heterogeneity and pleiotropy in the study findings.Results showed that human herpes virus 7(HHV-7)U14 antibody levels(OR:0.877,95%CI:0.797-0.964,P=0.007)exerted a protective effect against hemorrhagic stroke,and Chlamydia trachomatis(CT)tarp-D F2 antibody levels(OR:0.937,95%CI:0.885-0.992,P=0.025)had a potential protective effect;additionally,Epstein-Barr virus(EBV)ZEBRA antibody levels(OR:1.062,95%CI:1.012-1.114,P=0.014),human herpesvirus 6(HHV-6)p101k antibody levels(OR:1.054,95%CI:1.002-1.108,P=0.042),and cytomegalovirus(CMV)pp150 antibody levels(OR:1.086,95%CI:1.002-1.176,P=0.045)were potential risk factors for the disease.No significant pleiotropy or heterogeneity was observed in any of the MR analyses.Collectively,these findings confirmed a significant causal relationship between antibody-mediated immune responses and hemorrhagic stroke,and this study contributed to a deeper understanding of the potential mechanisms underlying hemorrhagic stroke onset.
