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Molecular targets and their application examples for interrupting chitin biosynthesis 被引量:1
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作者 Yanwei Duan Qing Yang 《Chinese Chemical Letters》 2025年第4期74-82,共9页
Chitin is an abundant aminopolysaccharide found in insect pests and phytopathogenic microorganisms but absent in higher plants and vertebrates. It is crucial for mitigating threats posed by chitin-containing organisms... Chitin is an abundant aminopolysaccharide found in insect pests and phytopathogenic microorganisms but absent in higher plants and vertebrates. It is crucial for mitigating threats posed by chitin-containing organisms to human health, food safety, and agriculture. Therefore, targeting the chitin biosynthesisassociated bioprocess holds a promise for developing human-safe and eco-friendly antifungal agents or pesticides. Chitin biosynthesis requires chitin synthase and associated factors, which are involved in the modification, regulation, organization or turnover of chitin during its biosynthesis. A number of enzymes such as chitinases, hexosaminidases, chitin deacetylases are closely related and therefore are promising targets for designing novel agrochemicals that target at chitin biosynthesis. This review summarizes the advances in understanding chitin biology over the past decade by our research group and collaborates,specifically regarding essential proteins linked to chitin biosynthesis that can be exploited as promising pesticide targets. Examples of small bioactive molecules that against the activity of these targets are given. 展开更多
关键词 Chitin biosynthesis Chitin deacetylase CHITINASE HEXOSAMINIDASE PESTICIDE FUNGICIDE
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Biosynthesis of xylo-oligosaccharides from wheat straw xylan through the synergistic hydrolysis by xylanase Xyn11A and arabinofuranosidase Abf62A
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作者 HU Die XU Daozhu +3 位作者 LU Zhiyi TANG Wei FAN Bo HE Yucai 《合成生物学》 北大核心 2025年第4期972-986,共15页
Xylo-oligosaccharides(XOSs)are a category of functional oligosaccharides primarily composed of 2-7 xylose units linked byβ-1,4 glycosidic bonds.They are recognized as soluble dietary fibers with prebiotic properties.... Xylo-oligosaccharides(XOSs)are a category of functional oligosaccharides primarily composed of 2-7 xylose units linked byβ-1,4 glycosidic bonds.They are recognized as soluble dietary fibers with prebiotic properties.Recently, there has been significant interest in manufacturing XOSs from xylan extracted from lignocellulosic biomass using enzyme catalysis under mild conditions. In this work, the arabinofuranosidase Abf62A gene was cloned from Aspergillus usamii genomic DNA through sequential molecular processes and expressed in Pichia pastoris X33. The xylan (100 g/L) extracted xylan in wheat straw (WS) was biologically hydrolyzed into 50.32 g/L of XOSs by xylanase Xyn11A (300 U/g substrate) and arabinofuranase Abf62A (20 U/g substrate), which indicated a notable synergistic effect compared to the 34.42 g/L XOSs produced via Xyn11A. The 50.32 g/L of XOSs products comprised xylobiose (31.71 g/L), xylotriose (15.92 g/L), xylotetraose (1.65 g/L) and xylopentaose (1.04 g/L). Notably, the combined content of xylobiose and xylotriose accounted for up to 94.7%. The XOSs purified from the enzyme hydrolysate could effectually scavenge free radicals, and the antioxidant activity was more than 90%. In summary, XOSs were biologically manufactured from wheat straw xylan through the synergistic biocatalysis via xylanase and arabinofuranosidase Abf62A in a green and sustainable way, rending one kind of prebiotic oligosaccharides with substantial positive effects on human and animal health. 展开更多
关键词 ARABINOFURANOSIDASE XYLANASE xylo-oligosaccharides XYLAN biosynthesis
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Starch biosynthesis and crop bioengineering
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作者 Andreas Blennow Kim Henrik Hebelstup Bent Larsen Petersen 《Grain & Oil Science and Technology》 2025年第3期235-245,共11页
Starch is an essential commodity for humans and other animals.Future demands require qualitative and quantitative improvement by crop and post-harvest engineering that calls for comprehensive actions requiring increas... Starch is an essential commodity for humans and other animals.Future demands require qualitative and quantitative improvement by crop and post-harvest engineering that calls for comprehensive actions requiring increased fundamental knowledge on starch biosynthesis,development of advanced breeding strategies,efficient farming,and well-adapted and up scalable extraction protocols for diverse starch products.Recent staggering progress in molecular breeding techniques,especially genome editing,have enabled generation of higher starch yield and special functional qualities required to support such advancement.However,this necessitates fundamental biochemical and mechanistic understanding of starch biosynthesis and the variegated starch crop germplasms,all of which are closely linked to the relationships between starch molecular structures and functionality of various starch types as directed by the different capabilities of starch crop genotypes.We here review starch biosynthesis and its genetic foundation with a focus on increasing nutritional and health-promoting value of starch especially through bioengineering of the high amylose trait. 展开更多
关键词 STARCH AMYLOSE Starch biosynthesis BIOENGINEERING Resistant starch Starch crops
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Highly fused tetracyclic diterpenoid natural products:Diverse biosynthesis and total synthesis
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作者 Yun-Hong Yu Yu Peng Wei-Dong Z.Li 《Chinese Chemical Letters》 2025年第10期109-124,共16页
A category of highly fused diterpenoid natural products possessing a characteristic perhydropyrene-like or rearranged tetracyclic skeleton structure are distributed in different life forms.Compared to traditional poly... A category of highly fused diterpenoid natural products possessing a characteristic perhydropyrene-like or rearranged tetracyclic skeleton structure are distributed in different life forms.Compared to traditional polycyclic diterpenoids,their biosynthetic pathways are quite unique and diverse.Chemists have pinpointed a range of this type of unusual diterpenoids:cycloamphilectanes and isocycloamphilectanes,kempenes and rippertanes,hydropyrene and hydropyrenol,along with recently disclosed cephalotanes.This review describes developments in this field and discusses the challenges associated with synthesizing this class of highly complex compounds. 展开更多
关键词 Tetracyclic diterpenoid Perhydropyrene skeleton Natural products biosynthesis Total synthesis Cephalotanes
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Triterpenoids from Cyclocarya paliurus:structure,biosynthesis,biological activities
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作者 Huiting Xi Zhongwei Liu +3 位作者 Weixiang Xu Jiexue Zhao Yuanxing Wang Jianhua Xie 《Food Science and Human Wellness》 2025年第6期2045-2070,共26页
Cyclocarya paliurus(Batalin)Iljinskaja,as a unique and rare monocotyledonous plant in Southern China,is a promising and economical Chinese herbal medicine and functional food.People have conducted a number of research... Cyclocarya paliurus(Batalin)Iljinskaja,as a unique and rare monocotyledonous plant in Southern China,is a promising and economical Chinese herbal medicine and functional food.People have conducted a number of research on C.paliurus because of its rich triterpenoids.However,no comprehensive review has illustrated the composition and pharmacological activity of triterpenoids from C.paliurus.This review summarizes 177 triterpenoids from different parts of C.paliurus.The structures of compounds were elucidated,and their biosynthesis was inferred.The biological activities of compounds and triterpenoid-rich extracts,including anti-diabetes,antihyperlipidemia,anti-inflammatory,anticancer or cytotoxicity,antioxidation,etc.,were discussed.C.paliurus can be an important and valuable supplement to the food market.This review provides a reference for the further research and application of C.paliurus triterpenoids in the fields of foods and pharmaceuticals. 展开更多
关键词 Cyclocarya paliurus TRITERPENOIDS STRUCTURE biosynthesis Bioactivity
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SiDWARF4 encodes an ent-copalyl diphosphate synthase (CPS) required for gibberellin biosynthesis and morphogenesis in foxtail millet
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作者 Yongchao Li Mengmeng Sun +12 位作者 Rui Zhao Jiayi Chen Yunhao Chen Shuqi Dong Xiangyang Yuan Xiaorui Li Lulu Gao Guanghui Yang Peiyong Xin Shujing Cheng Jinfang Chu Xiaoqian Chu Jiagang Wang 《Journal of Integrative Agriculture》 2025年第6期2438-2442,共5页
Foxtail millet(Setaria italica) is one of the primary multigrain crops originating from China, with a long history of cultivation and significant importance in Chinese farming civilization(Diao 2019). However, the exc... Foxtail millet(Setaria italica) is one of the primary multigrain crops originating from China, with a long history of cultivation and significant importance in Chinese farming civilization(Diao 2019). However, the excessive height of foxtail millet plants makes them susceptible to lodging, severely impacting the yield(Tian et al. 2010;Diao et al. 2024). During the “Green Revolution”, many types of cereals, including rice(Oryza sativa L.) and wheat(Triticum aestivum L.)(Brosius 1991;Peng et al. 1999), were bred to dwarf, resulting in significantly increased yields. Consequently, reducing plant height has become a key breeding objective for foxtail millet. 展开更多
关键词 breeding foxtail millet multigrain crops gibberellin biosynthesis MORPHOGENESIS setaria italica LODGING foxtail millet setaria
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BrWax1 function in wax biosynthesis was verified by allelic mutations in Chinese cabbage
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作者 Gengxing Song Xiaoli Tang +4 位作者 Chuanhong Liu Jiaqi Zou Shiyao Dong Jie Ren Hui Feng 《Horticultural Plant Journal》 2025年第3期1377-1380,共4页
Plants possess a hydrophobic layer of wax on their aerial surface,consisting mainly of amorphous intra-cuticular wax and epicuticular wax crystals(Kunst and Samuels,2003).This waxy coating contains a wide variety of v... Plants possess a hydrophobic layer of wax on their aerial surface,consisting mainly of amorphous intra-cuticular wax and epicuticular wax crystals(Kunst and Samuels,2003).This waxy coating contains a wide variety of very-long-chain fatty acids(VLCFAs)and their derivatives,including alkanes,alcohols,aldehydes,esters,and ketones. 展开更多
关键词 hydrophobic layer wax aerial surface hydrophobic layer waxy coating Chinese cabbage brwax allelic mutations wax biosynthesis
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Creation of purple leaf peanut germplasm through metabolic engineering of the betalain biosynthesis pathway
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作者 Dongxin Huai Jie Wu +13 位作者 Xiaomeng Xue Hao Liu Nian Liu Li Huang Liying Yan Yuning Chen Xin Wang Qianqian Wang Yanping Kang Zhihui Wang Yanbin Hong Huifang Jiang Boshou Liao Yong Lei 《Journal of Integrative Agriculture》 2025年第4期1606-1609,共4页
With the progress of urbanization,rural tourism has emerged as a popular leisure activity in China.The crop field with pattern art has been gaining popularity over the years,using strains with colorful leaves to creat... With the progress of urbanization,rural tourism has emerged as a popular leisure activity in China.The crop field with pattern art has been gaining popularity over the years,using strains with colorful leaves to create various impressive designs(Xu 2024).A lot of successful cases in rice fields have not only attracted tourists but also increased the income of farmers(Song et al.2020).Plants with colorful leaves also have gained significant popularity in ornamental agriculture.Therefore,developing plants with colorful leaves has gained significant popularity in ornamental agriculture. 展开更多
关键词 ornamental agriculture rural tourism metabolic engineering betalain biosynthesis urbanization crop field pattern art colorful leaves strains colorful leaves
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Convergent musk biosynthesis across host and microbiota in musk deer and muskrat
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作者 Yi-Shan Sun Lei Zhao +11 位作者 Cheng-Li Zheng Xiao-Ting Yan Ye Li Xue-Li Gao Ting-Feng Xue Yi-Ming Zhang Zhi-Peng Li Rasmus Heller Chen-Guang Feng Chao Xu Kun Wang Qiang Qiu 《Zoological Research》 2025年第3期505-517,共13页
Mammalian scent glands mediate species-specific chemical communication,yet the mechanistic basis for convergent musk production remain incompletely understood.Forest musk deer and muskrat have independently evolved sp... Mammalian scent glands mediate species-specific chemical communication,yet the mechanistic basis for convergent musk production remain incompletely understood.Forest musk deer and muskrat have independently evolved specialized musk-secreting glands,representing a striking case of convergent evolution.Through an integrated multi-omics approach,this study identified cyclopentadecanone as a shared key metabolic precursor in musk from both forest musk deer and muskrat,although downstream metabolite profiles diverged between the two lineages.Single-cell RNA sequencing revealed that these specialized apocrine glands possessed unique secretory architecture and exhibited transcriptional profiles associated with periodic musk production,distinct from those in conventional apocrine glands.Convergent features were evident at the cellular level,where acinar,ductal,and basal epithelial subtypes showed parallel molecular signatures across both taxa.Notably,acinar cells in both species expressed common genes involved in fatty acid and glycerolipid metabolism(e.g.,ACSBG1,HSD17B12,HACD2,and HADHA),suggesting a conserved molecular framework for musk precursor biosynthesis.Metagenomic analysis of musk samples further revealed parallel microbial community structures dominated by Corynebacterium and enriched in lipid metabolic pathways.These findings suggest multi-level convergence in musk biosynthesis,from molecular pathways to microbial communities,providing novel insights into mammalian chemical signaling and artificial musk production. 展开更多
关键词 Convergence Musk biosynthesis Musk gland MICROBIOTA Multi-omics approach
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HuLBD1 Promotes Flavonoid Biosynthesis Involved in Senescence of Hylocereus undatus by Negatively Regulating HuCHS
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作者 Xinxin Chen Fuxin Li +2 位作者 Jingyu Jia Yajing Tian Xin Li 《Phyton-International Journal of Experimental Botany》 2025年第3期825-842,共18页
In plants, transcription factor (TF) family LATERAL ORGAN BOUNDARIES DOMAIN (LBD) has been identified to be involved in the ripening and senescence processes of fruits. However, the function of LBD in Hylocereus undat... In plants, transcription factor (TF) family LATERAL ORGAN BOUNDARIES DOMAIN (LBD) has been identified to be involved in the ripening and senescence processes of fruits. However, the function of LBD in Hylocereus undatus (Haw.) Britton & Rose (H. undatus) has not been reported yet. Through transcriptomic analysis, virus-induced gene silencing (VIGS) technology, and RT-qPCR validation, we investigated the role of the LBD TFs in the senescence of H. undatus. Transcriptomic analysis revealed that HuLBD1 is a key transcription factor of the LBD family regulating H. undatus senescence. After silencing HuLBD1, 5075 differentially expressed genes (DEGs) were identified. GSEA results showed that these DEGs were mainly enriched in the phenylpropanoids and flavonoid biosynthesis pathway. The leading subset of genes in these two pathways included 16 DEGs, with four upregulated genes, HuCHS1-2, HuFLS1, HuCYP75B2, and HuCHS5-2 being central in the Protein-Protein Interaction (PPI) network. H. undatus phenotypic experiments confirmed that silencing HuLBD1 significantly increased the flavonoid content in the fruit peel, and RT-qPCR validation showed that the gene expression trends were consistent with the RNA-seq data. The study indicated that HuLBD1 likely delays the fruit senescence process by negatively regulating the expression of four key genes, including HuCHS1-2, thus promoting the synthesis of phenylpropanoids such as flavonoids. In conclusion, our findings suggest that the HuLBD1 TF plays an important role in the senescence of H. undatus fruit, providing a theoretical basis for postharvest senescence control. 展开更多
关键词 HuLBD1 Hylocereus undatus flavonoid biosynthesis VIGS TRANSCRIPTOMICS
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A Biosynthesis Method of Color-tunable Fluorescent Cellulose via In situ Polymerization Using Microbial Systems
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作者 Hao-Jie Zhang Yu-Jie Chang +3 位作者 Hai-Ying Chen Wen-Xiao Du Da-Peng Yang Lei Han 《Chinese Journal of Polymer Science》 2025年第8期1284-1292,共9页
In recent years,cellulose-based fluorescent polymers have received considerable attention.However,conventional modification methods face challenges such as insolubility in most solvents,fluorescence instability,and en... In recent years,cellulose-based fluorescent polymers have received considerable attention.However,conventional modification methods face challenges such as insolubility in most solvents,fluorescence instability,and environmental risks.In this study,a novel biosynthesis strategy was developed to fabricate fluorescent cellulose by adding fluorescent glucose derivatives to a bacterial fermentation broth.The metabolic activity of bacteria is utilized to achieve in situ polymerization of glucose and its derivatives during the synthesis of bacterial cellulose.Owing to the structural similarity between triphenylamine-modified glucose(TPA-Glc N)and glucose monomers,the TPA-Glc N were efficiently assimilated by the bacterial cells and incorporated into the cellulose matrix,resulting in a uniform distribution of fluorescence.The fluorescence color and intensity of the obtained cellulose could be adjusted by varying the amount of the fluorescent glucose derivatives.Compared to the fluorescent cellulose synthesized through physical dyeing,the fluorescence of the products obtained by in situ polymerization showed higher intensity and stability.Furthermore,fluorescent bacterial cellulose can be hydrolyzed into nanocellulose-based ink,which demonstrates exceptional anti-counterfeiting capabilities under UV light.This biosynthesis method not only overcomes the limitations of traditional modification techniques but also highlights the potential of microbial systems as platforms for synthesizing functional polymers. 展开更多
关键词 Fluorescent polymer biosynthesis In situ polymerization CELLULOSE Color-tunable fluorescent
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The chromosome-scale genome of black wolfberry(Lycium ruthenicum)provides useful genomic resources for identifying genes related to anthocyanin biosynthesis and disease resistance
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作者 Gulbar Yisilam Enting Zheng +5 位作者 Chuanning Li Zhiyong Zhang Ying Su Zhenzhou Chu Pan Li Xinmin Tian 《Plant Diversity》 2025年第2期201-213,共13页
The black wolfberry(Lycium ruthenicum;2n=2x=24)is an important medicinal plant with ecological and economic value.Its fruits have numerous beneficial pharmacological activities,especially those of anthocyanins,polysac... The black wolfberry(Lycium ruthenicum;2n=2x=24)is an important medicinal plant with ecological and economic value.Its fruits have numerous beneficial pharmacological activities,especially those of anthocyanins,polysaccharides,and alkaloids,and have high nutritional value.However,the lack of available genomic resources for this species has hindered research on its medicinal and evolutionary mechanisms.In this study,we developed the telomere-to-telomere(T2T)nearly gapless genome of L.ruthenicum(2.26 Gb)by integrating PacBio HiFi,Nanopore Ultra-Long,and Hi-C technologies.The assembled genome comprised 12 chromosomes with 37,149 protein-coding genes functionally annotated.Approximately 80%of the repetitive sequences were identified,of which long terminal repeats(LTRs)were the most abundant,accounting for 73.01%.The abundance of LTRs might be the main reason for the larger genome of this species compared to that of other Lycium species.The species-specific genes of L.ruthenicum were related to defense mechanisms,salt tolerance,drought resistance,and oxidative stress,further demonstrating their superior adaptability to arid environments.Based on the assembled genome and fruit transcriptome data,we further constructed an anthocyanin biosynthesis pathway and identified 19 candidate structural genes and seven transcription factors that regulate anthocyanin biosynthesis in the fruit developmental stage of L.ruthenicum,most of which were highly expressed at a later stage in fruit development.Furthermore,154 potential disease resistance-related nucleotidebinding genes have been identified in the L.ruthenicum genome.The whole-genome and proximal,dispersed,and tandem duplication genes in the L.ruthenicum genome enriched the number of genes involved in anthocyanin synthesis and resistance-related pathways.These results provide an important genetic basis for understanding genome evolution and biosynthesis of pharmacologically active components in the Lycium genus. 展开更多
关键词 Lycium ruthenicum GENOME Anthocyanin biosynthesis Gene duplication Comparative genomics
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Pod-shattering characteristic differences between shattering-resistant and shattering-susceptible common vetch accessions are associated with lignin biosynthesis
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作者 Xueming Dong Jiwei Chen +4 位作者 Qiang Zhou Dong Luo Longfa Fang Wenxian Liu Zhipeng Liu 《Journal of Integrative Agriculture》 2025年第12期4528-4545,共18页
The common vetch(Vicia sativa L.)is a self-pollinated annual forage legume that is widely distributed worldwide.It has wide adaptability and high nutritional value and is commonly used as an important protein source f... The common vetch(Vicia sativa L.)is a self-pollinated annual forage legume that is widely distributed worldwide.It has wide adaptability and high nutritional value and is commonly used as an important protein source for livestock feed.However,pod shattering seriously limits the yield of common vetch.To clarify the mechanism of pod shattering in common vetch,the pod walls of three shattering-resistant(SR)accessions(B65,B135,and B392)and three shattering-susceptible(SS)accessions(L33,L170,and L461)were selected for transcriptome sequencing.A total of 17,190 differentially expressed genes(DEGs)were identified in the pod wall of B135 and L461 common vetch at 5,10,15,20,and 25 days after anthesis.Kyoto Encyclopedia of Genes and Genomes(KEGG)analysis showed that“phenylpropanoid biosynthesis”was the most significantly enriched pathway,and 40 structural genes associated with lignin biosynthesis were identified and differentially expressed in B135 and L461 common vetch.We analysed the DEGs in the pod wall of three SR and three SS accessions at 15 days after anthesis,and most of the DEGs were consistent with the significant enrichment pathways identified in B135 and L461 common vetch.The total lignin content of SR accessions was significantly lower than the SS accessions.The present study lays a foundation for understanding the molecular regulatory mechanism of pod shattering related to lignin biosynthesis in common vetch and provides reference functional genes for breeders to further cultivate shattering-resistant common vetch varieties. 展开更多
关键词 Vicia sativa L. pod shattering pod wall TRANSCRIPTOME lignin biosynthesis
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Characterization of three novel R2R3-MYB transcription factors PrMYBi(1-3) repressing the anthocyanin biosynthesis in tree peony
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作者 Jin Zhu Yizhou Wang +3 位作者 Xian Zhou Hechen Zhang Shanshan Li Liangsheng Wang 《Horticultural Plant Journal》 2025年第6期2225-2236,共12页
Petal blotch is a prevalent pigmentation pattern observed in the Xibei tree peony(Paeonia rockii), possessing significant aesthetic value and playing a crucial role in the species' reproduction and fitness. Despit... Petal blotch is a prevalent pigmentation pattern observed in the Xibei tree peony(Paeonia rockii), possessing significant aesthetic value and playing a crucial role in the species' reproduction and fitness. Despite years of research, deciphering the molecular mechanisms underlying blotch formation remains challenging. As is well known, floral pigmentation is frequently associated with the familiar R2R3-MYB transcription factors. The key MYB anthocyanin activators of P. rockii ‘Shu Sheng Peng Mo' were previously reported in our preceding study. In this study, we identified and characterized three R2R3-MYBs, Pr MYBi1, Pr MYBi2, and Pr MYBi3, which belong to subgroup 4(SG4) and play repressor roles in anthocyanin biosynthesis. A quantitative real-time PCR(q RT-PCR) assay indicated that the expression of Pr MYBi1 and Pr MYBi3 gradually increased during flowering development and was substantially up-regulated in non-blotch compared to blotch. Yeast one-hybrid and dualluciferase assays demonstrated that Pr MYBi(1-3) directly target the anthocyanin structural genes and repress their transcription. The genetic transformation of tobacco demonstrated that the overexpression of Pr MYBi(1-3) decreased anthocyanin accumulation in flowers, with Pr MYBi1 serving as the most effective repressor. Our results revealed that SG4 R2R3-MYBs negatively regulate the anthocyanin pathway in P.rockii conservatively, and we provide the definite members. These findings will advance future research to unravel the mystery of blotch pattern formation. 展开更多
关键词 Tree peony Pigmentation pattern Blotch R2R3-MYB REPRESSOR Anthocyanin biosynthesis
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TaJAZ1-mediated transcriptional regulation of starch biosynthesis synergistically enhances resistant starch content and yield in wheat
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作者 Shasha Yuan Dandan Zhang +6 位作者 Yue Xiao Xiaohang Wang Haitao Liu Jinxi Wang Hongjun Zhang Guozhang Kang Gezi Li 《The Crop Journal》 2025年第6期1731-1745,共15页
Jasmonate ZIM-domain(JAZ)proteins are key repressors of the jasmonate signaling pathway and are involved in plant stress responses.However,their roles in starch biosynthesis in cereal crops remain unclear.In this stud... Jasmonate ZIM-domain(JAZ)proteins are key repressors of the jasmonate signaling pathway and are involved in plant stress responses.However,their roles in starch biosynthesis in cereal crops remain unclear.In this study,we identified a locus associated with starch content on chromosome 5A by a genome-wide association study(GWAS).At this locus,a gene(TraesCS5A02G204900)encoding a JAZ protein(TaJAZ1)was found to be highly expressed in grains.CRISPR/Cas9-induced mutants were generated to investigate the role of TaJAZ1 in starch biosynthesis.Phenotypic characterization revealed significant alterations in starch granule size,crystallinity,and digestibility.Specifically,the two mutant lines(tajaz1-abd#1 and tajaz1-abd#2)exhibited increased total starch(12.5%and 17.6%,respectively),amylose(79.3%and 72.1%,respectively),resistant starch(88.5%and 96.8%,respectively),and grain yield per plant(103.8%and 58.8%,respectively).Furthermore,the mutation of TaJAZ1 significantly increased the expression levels of TaSBEI,TaAGPS1,TaAGPL1 and TaGBSSI,but decreased the expression levels of TaSSIIa,TaSSIIb and TaSBEIIa by binding to their promoters.Taken together,our results demonstrate that TaJAZ1 is a negative regulator of starch biosynthesis and grain yield.These findings not only provide novel insights into wheat starch biosynthesis regulation,but also contribute to potential genes for breeding wheat varieties of better quality and higher yield. 展开更多
关键词 Triticum aestivum L. Starch biosynthesis TaJAZ1 Grain quality Starch properties
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The telomere-to-telomere genome of Selaginella moellendorffii provides insights into genome evolution and biflavone biosynthesis
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作者 Hui Xiong Cong Yin +6 位作者 Ding Tang Xiran Xiong Xinqiao Liu Zhengwen Wang Xiaolei Yu Zhinan Mei Juan Li 《Horticultural Plant Journal》 2025年第6期2250-2266,共17页
Selaginella moellendorffii Hieron.,a lycophyte of significant medicinal and evolutionary importance,is recognized as one of the earliest vascular plants.However,the absence of a high-quality reference genome has hinde... Selaginella moellendorffii Hieron.,a lycophyte of significant medicinal and evolutionary importance,is recognized as one of the earliest vascular plants.However,the absence of a high-quality reference genome has hindered the comprehensive exploration of its unique phylogenetic position and therapeutic potential,thereby limiting our understanding of its genomic structure and metabolic capabilities.In this study,we present the first chromosome-level,telomere-to-telomere(T2T)genome assembly of S.moellendorffii,constructed utilizing PacBio HiFi,Oxford Nanopore(ONT),and Hi-C technologies.The assembled genome,spanning 112.83 Mb across 10 chromosomes with a contig N50 of 11.11 Mb,exhibited exceptional completeness(BUSCO score:95.7%)and accuracy(QV=48.11).Comparative genomic analysis identified 3515 gene families unique to S.moellendorffii,with significant enrichment in secondary metabolismpathways,including those related to flavonoid biosynthesis.Phylogenetic analysis revealed that S.moellendorffii diverged from Isoetes approximately 339.6 million years ago(MYA),representing a key evolutionary transition in early vascular plants.By integrating tissue-specific transcriptome and metabolome analyses,we uncovered the molecular basis of biflavone biosynthesis,identifying key enzymes and regulatory networks that govern the production of these bioactive compounds.We observed a correlation between the tissue-specific accumulation patterns of six major biflavones,including amentoflavone and ginkgetin,and the expression of their biosynthetic genes.This high-quality genome assembly,coupled with multi-omics analyses,offers unprecedented insights into the evolution of early vascular plants and elucidates the molecular mechanisms behind their specialized metabolism. 展开更多
关键词 Selaginella moellendorffii Hieron. Telomere-to-telomere genome assembly Sequencing platforms Genome annotation Comparative genomics Biflavone biosynthesis Multi-omics analysis
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Solving the puzzle of salicylic acid biosynthesis in plants
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作者 Pei Miao Jian-Min Zhou 《Journal of Genetics and Genomics》 2025年第11期1305-1307,共3页
Originally extracted from willow bark,salicylic acid(SA)provided the structural basis for the synthesis of acetylsalicylic acid(aspirin)in 1897,a milestone that exemplifies the far-reaching biomedical relevance of pla... Originally extracted from willow bark,salicylic acid(SA)provided the structural basis for the synthesis of acetylsalicylic acid(aspirin)in 1897,a milestone that exemplifies the far-reaching biomedical relevance of plant-derived metabolites(Desborough and Keeling,2017).In plants,SA functions as a pleiotropic phytohormone that orchestrates immune reprogramming,serving as a central mediator of both local defense responses and systemic acquired resistance(SAR). 展开更多
关键词 biosynthesis acetylsalicylic acid aspirin pleiotropic phytohormone willow bark orchestrates immune reprogrammingserving salicylic acid willow barksalicylic acid sa provided PLANTS
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Molecular mechanism of exopolysaccharide biosynthesis regulated by wze and wzd genes on the immunomodulatory effects of probiotic Lacticaseibacillus paracasei S-NB
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作者 Luyao Xiao Qian Yang +4 位作者 Changliang Zhang Kai Ma Xiaogan Zhao Xin Rui Wei Li 《Food Science and Human Wellness》 2025年第1期293-306,共14页
The surface macromolecules of probiotic bacteria play crucial roles in modulating immune responses in the host.Exopolysaccharide(EPS)from lactic acid bacteria(LAB)have been widely reported to exhibit immunomodulatory ... The surface macromolecules of probiotic bacteria play crucial roles in modulating immune responses in the host.Exopolysaccharide(EPS)from lactic acid bacteria(LAB)have been widely reported to exhibit immunomodulatory activity.In this study,the EPS biosynthesis gene cluster of Lacticaseibacillus paracasei S-NB was analyzed and a deletion mutant S-NBΔ7576(two genes S-NB_2175/wze and S-NB_2176/wzd were responsible for the chain length determination and export of EPS)was successfully constructed,resulting a 40.02%decrease in the production of EPS.The deletion of wze and wzd had little effect on the monosaccharide composition and major groups of the two EPS fractions(BEPS1 and BEPS2).Both BEPS1 and BEPS2 could inhibit the transcriptional level of tumor necrosis factor-α(TNF-α),interleukin-1β(IL-1β),inducible nitric oxide synthase(i NOS)and cyclooxygenase-2(COX-2)mRNA in RAW 264.7 cells induced by lipopolysaccharide(LPS),and enhance host immune tolerance via suppressing NF-κB and MAPK signaling.Notably,the S-NBΔ7576 mutant supplied with the BEPS1/BEPS2 exhibited more significant inhibition of cytokines production and the phosphorylation of p65 and c-Jun N-terminal kinase(JNK)in LPS-stimulated cells compared with the S-NBΔ7576 mutant alone.Our study provided the immunomodulatory effect of BEPS1 and BEPS2 from L.paracasei S-NB,in which the wze and wzd genes associated with EPS biosynthesis may play an important role. 展开更多
关键词 Lacticaseibacillus paracasei Exopolysaccharide(EPS) biosynthesis IMMUNOMODULATORY
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Research Progress on Biosynthesis and Genetic Analysis of Soybean Seed Oil
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作者 Ning Hailong Liu Sibing +3 位作者 Hu Bo Zhao Qichao Ning Shicheng Li Wenxia 《Journal of Northeast Agricultural University(English Edition)》 2025年第3期72-85,共14页
Soybean seed oil has always been the primary focus of researches on improving the quality of soybean.Triacylglycerol,which is composed of fatty acids and glycerol,serves as the main storage form of soybean seed oil.Th... Soybean seed oil has always been the primary focus of researches on improving the quality of soybean.Triacylglycerol,which is composed of fatty acids and glycerol,serves as the main storage form of soybean seed oil.Therefore,the biosynthesis of fatty acids and the assembly of triacylglycerol significantly affect the quality of soybean seed oil.The process of soybean seed oil synthesis was comprehensively analyzed by examining the synthesis and activation of acetyl-CoA,fatty acid biosynthesis and desaturation,triacylglycerol assembly,and other related processes,additionally,this analysis identified the key enzymes and transcription factors involved in each link of the oil synthesis process.It was found that the researches on the key enzymes of carbon source regulation,pyruvate dehydrogenase complex and acetyl-CoA carboxylase,in the genetic network of soybean seed oil synthesis,were somewhat limited.Analyzing their structures and functions would aid in further understanding the molecular mechanism of soybean fatty acid synthesis,which would be beneficial for enhancing soybean oil content and synthesis efficiency.Based on summarizing the results of genetic analysis of soybean oil and fatty acids,the prospects for mechanism analysis and advancements in biological breeding techniques for improving soybean oil quality at the molecular level were discussed. 展开更多
关键词 SOYBEAN TRIACYLGLYCEROL biosynthesis of fatty acid quantitative trait locus(QTL) ENZYME
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Characterization of two highly specific O-rhamnosyltransferases involved in the biosynthesis of steroidal saponins from Paris polyphylla var.yunnanensis
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作者 Jia-Jing Zhou Zi-Long Wang +4 位作者 Meng Zhang Yang-Oujie Bao Guo-Wei Chang Yun-Gang Tian Min Ye 《Chinese Chemical Letters》 2025年第11期436-440,共5页
Steroidal saponins are major bioactive compounds of the medicinal plant Paris polyphylla var.yunnanensis.In this work,two O-rhamnosyltransferases Pp Rha GT1 and Pp Rha GT2 with strict substrate specificity were charac... Steroidal saponins are major bioactive compounds of the medicinal plant Paris polyphylla var.yunnanensis.In this work,two O-rhamnosyltransferases Pp Rha GT1 and Pp Rha GT2 with strict substrate specificity were characterized from this plant.These enzymes could catalyze the synthesis of paris saponinsⅡandⅦ,and realized semi-biosynthesis of a series of paris steroidal saponins in tobacco leaves.Molecular dynamics simulation revealed the substrate specificity of Pp Rha GT1 was due to interactions between the 2-O-rhamnosyl group and surrounding amino acids particularly S382 and E383. 展开更多
关键词 Paris polyphylla var.yunnanensis GLYCOSYLTRANSFERASE Paris saponinⅡ Paris saponinⅦ biosynthesis
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