Identifying key regulators related to cadmium(Cd)tolerance and accumulation is the main factor for genetic engineering to improve plants for bioremediation and ensure crop food safety.MicroRNAs(miRNAs),as fine-tuning ...Identifying key regulators related to cadmium(Cd)tolerance and accumulation is the main factor for genetic engineering to improve plants for bioremediation and ensure crop food safety.MicroRNAs(miRNAs),as fine-tuning regulators of genes,participate in various abiotic stress processes.MiR535 is an ancient conserved non-coding small RNA in land plants,positively responding to Cd stress.We investigated the effects of knocking out(mir535)and overexpressing miR535(mir535 and OE535)under Cd stress in rice plants in this study.The mir535 plants showed better Cd tolerance than wild type(WT),whereas the OE535 showed the opposite effect.Cd accumulated approximately 71.9%and 127%in the roots of mir535 and OE535 plants,respectively,compared to WT,after exposure to 2μmol/L Cd.In brown rice,the total Cd accumulation of OE535 and mir535 was about 78%greater and 35%lower than WT.When growing in 2 mg/kg Cd of soil,the Cd concentration was significantly lower in mir535 and higher in OE535 than in the WT;afterward,we further revealed the most possible target gene SQUAMOSA promoter binding-like transcription factor 7(SPL7)and it negatively regulates Nramp5 expression,which in turn regulates Cd metabolism.Therefore,the CRISPR/Cas9 technology may be a valuable strategy for creating new rice varieties to ensure food safety.展开更多
Fruit pigmentation is a major signal that attracts frugivores to enable seed dispersal.In mostfleshy fruit,green chlorophyll typically accumulates early in development and is replaced by a range of pigments during rip...Fruit pigmentation is a major signal that attracts frugivores to enable seed dispersal.In mostfleshy fruit,green chlorophyll typically accumulates early in development and is replaced by a range of pigments during ripening.In species such as grape and strawberry,chlorophyll is replaced by red anthocyanins produced by theflavonoid biosynthetic pathway.Eggplant(Solanum melongena)is unique,as its fruit accumulates an-thocyanins beginning from fruit set,and these are later replaced by the yellowflavonoid-pathway interme-diate naringenin chalcone.To decipher the genetic regulation of this extraordinary pigmentation shift,we integrated mRNA and microRNA(miRNA)profiling data obtained from developing eggplant fruit.We discovered that SQUAMOSA PROMOTER BINDING-LIKE(i.e.,SPL6a,SPL10,and SPL15),MYB1,and MYB2 transcription factors(TFs)regulate anthocyanin biosynthesis in early fruit development,whereas the MYB12 TF controls later accumulation of naringenin chalcone.We further show that miRNA157 and miRNA858 negatively regulate the expression of SPLs and MYB12,respectively.Taken together,ourfind-ings suggest that opposing and complementary expression of miRNAs and TFs controls the pigmentation switch in eggplant fruit skin.Intriguingly,despite the distinctive pigmentation pattern in eggplant,fruit development in other species makes use of homologous regulatory factors to control the temporal and spatial production of different pigment classes.展开更多
基金This article supported by the Youth Program of National Natural Science Foundation of China(No.31901515)the National Natural Science Foundation of China(No.21976161).
文摘Identifying key regulators related to cadmium(Cd)tolerance and accumulation is the main factor for genetic engineering to improve plants for bioremediation and ensure crop food safety.MicroRNAs(miRNAs),as fine-tuning regulators of genes,participate in various abiotic stress processes.MiR535 is an ancient conserved non-coding small RNA in land plants,positively responding to Cd stress.We investigated the effects of knocking out(mir535)and overexpressing miR535(mir535 and OE535)under Cd stress in rice plants in this study.The mir535 plants showed better Cd tolerance than wild type(WT),whereas the OE535 showed the opposite effect.Cd accumulated approximately 71.9%and 127%in the roots of mir535 and OE535 plants,respectively,compared to WT,after exposure to 2μmol/L Cd.In brown rice,the total Cd accumulation of OE535 and mir535 was about 78%greater and 35%lower than WT.When growing in 2 mg/kg Cd of soil,the Cd concentration was significantly lower in mir535 and higher in OE535 than in the WT;afterward,we further revealed the most possible target gene SQUAMOSA promoter binding-like transcription factor 7(SPL7)and it negatively regulates Nramp5 expression,which in turn regulates Cd metabolism.Therefore,the CRISPR/Cas9 technology may be a valuable strategy for creating new rice varieties to ensure food safety.
基金the Abney Foundation,Leona M.and Harry B.Helmsley Charitable TrustJeanne and Joseph Nissim Foundation for Life Sciences+1 种基金Tom and Sondra Rykoff Family Foundation Researchthe Raymond Burton Plant Genome Research Fund for supporting the AA lab activity.
文摘Fruit pigmentation is a major signal that attracts frugivores to enable seed dispersal.In mostfleshy fruit,green chlorophyll typically accumulates early in development and is replaced by a range of pigments during ripening.In species such as grape and strawberry,chlorophyll is replaced by red anthocyanins produced by theflavonoid biosynthetic pathway.Eggplant(Solanum melongena)is unique,as its fruit accumulates an-thocyanins beginning from fruit set,and these are later replaced by the yellowflavonoid-pathway interme-diate naringenin chalcone.To decipher the genetic regulation of this extraordinary pigmentation shift,we integrated mRNA and microRNA(miRNA)profiling data obtained from developing eggplant fruit.We discovered that SQUAMOSA PROMOTER BINDING-LIKE(i.e.,SPL6a,SPL10,and SPL15),MYB1,and MYB2 transcription factors(TFs)regulate anthocyanin biosynthesis in early fruit development,whereas the MYB12 TF controls later accumulation of naringenin chalcone.We further show that miRNA157 and miRNA858 negatively regulate the expression of SPLs and MYB12,respectively.Taken together,ourfind-ings suggest that opposing and complementary expression of miRNAs and TFs controls the pigmentation switch in eggplant fruit skin.Intriguingly,despite the distinctive pigmentation pattern in eggplant,fruit development in other species makes use of homologous regulatory factors to control the temporal and spatial production of different pigment classes.
