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Gap-free genome assembly and metabolomics analysis of common bean provide insights into genomic characteristics and metabolic determinants of seed coat pigmentation
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作者 Bo Zhao Hui Zhang +13 位作者 Qin Zhao Rina Wu Qian You Bihui Wang Yiming Wang Zhilan Yan Peng Wang Chunguo Huang Wei Zhang Youmei Wang Xiaopeng Hao Jing Wu Lixiang Wang Zhaosheng Kong 《Journal of Genetics and Genomics》 2025年第6期852-855,共4页
Common bean(Phaseolus vulgaris L.)is a vital source of protein and essential nutrients for human consumption and plays a key role in sustainable agriculture due to its nitrogen-fixing ability(Nadeem et al.,2021).Kidne... Common bean(Phaseolus vulgaris L.)is a vital source of protein and essential nutrients for human consumption and plays a key role in sustainable agriculture due to its nitrogen-fixing ability(Nadeem et al.,2021).Kidney beans,a subcategory of dry common beans,are highly valued for their rich protein,dietary fiber,low fat content,and various trace elements(Garcia-Cordero et al.,2021).Despite the release of several de novo genome assemblies(Goodstein et al.,2012;Schmutz et al.,2014;Vlasova et al.,2016;Cortinovis et al.,2024),existing common bean genomes remain incomplete,particularly in complex regions such as centromeres and telomeres,limiting a comprehensive understanding of the genomic landscape. 展开更多
关键词 trace elements garcia cordero genomic characteristics gap free genome assembly metabolomics analysis common beansare de novo genome assemblies goodstein sustainable agriculture common bean
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From gaps to insights:telomere-to-telomere cotton genome deciphers centromere dynamics after polyploidization
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作者 Zhaoen Yang Fuguang Li 《Science China(Life Sciences)》 2025年第8期2496-2497,共2页
Polyploidization is recognized as a powerful driver of plant evolution and domestication.In the genus Gossypium,the natural hybridization of an A-genome ancestor and a D-genome ancestor gave rise to allopolyploid cott... Polyploidization is recognized as a powerful driver of plant evolution and domestication.In the genus Gossypium,the natural hybridization of an A-genome ancestor and a D-genome ancestor gave rise to allopolyploid cottons(Huang et al.,2024),such as Gossypium hirsutum and Gossypium barbadense.Previous cotton reference genomes(Du et al.,2018;Hu et al.,2019;Huang et al.,2020;Li et al.,2015;Wang et al.,2019;Yang et al.,2019;Zhang et al.,2015),although instrumental to cotton genetics and breeding,contained large assembly gaps,especially repetitive regions like centromeres. 展开更多
关键词 assembly gaps POLYPLOIDIZATION COTTON natural hybridization CENTROMERE plant evolution domesticationin GENOME allopolyploid cottons huang
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