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绵羊KIAA2012与UTP20多态、胴体品质性状关联与生物信息学分析 被引量:1
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作者 郭思武 储明星 刘玉芳 《畜牧与兽医》 北大核心 2022年第3期1-10,共10页
为探究KIAA2012和UTP20多态性与胸椎数间的关联性,筛选胸椎数相关重要分子标记,利用Sequenom MassARRAY^(■)SNP技术检测苏尼特羊和小尾寒羊中与胸椎数相关候选基因KIAA2012和UTP20的单核苷酸多态性(SNPs)位点,开展群体遗传学分析,并与... 为探究KIAA2012和UTP20多态性与胸椎数间的关联性,筛选胸椎数相关重要分子标记,利用Sequenom MassARRAY^(■)SNP技术检测苏尼特羊和小尾寒羊中与胸椎数相关候选基因KIAA2012和UTP20的单核苷酸多态性(SNPs)位点,开展群体遗传学分析,并与胸椎数进行关联分析;利用生物信息学分析工具对KIAA2012和UTP20的遗传特征进行分析。结果表明,UTP20 g.170058254G>A位点在苏尼特羊群体中突变型(GA)胸椎数显著(P<0.05)高于野生型(GG),g.170053888G>A和g.170072471G>A在小尾寒羊和苏尼特羊中均与胸椎数没有显著相关;KIAA2012 g.203440537A>G、g.203424302A>G、g.203440384A>T在小尾寒羊和苏尼特羊中与胸椎数均没有显著相关(P>0.05)。SNPs与胴体长度分析结果表明,在小尾寒羊KIAA2012 g.203440537A>G中,突变型(GA)胴体长度显著(P<0.05)高于野生型(GG)。生物信息学分析表明,KIAA2012为亲水蛋白,UTP20为疏水蛋白,两者蛋白结构均不稳定,无跨膜结构域。综上所述,UTP20 g.170058254G>A位点与苏尼特羊胸椎数性状显著相关,KIAA2012 g.203440537A>G与小尾寒羊胴体长度性状显著相关,可作为调控绵羊胸椎数变异潜在的分子辅助标记。 展开更多
关键词 KIAA2012 utp20 SNPS 胸椎数 绵羊
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1A6/DRIM, the human UTP20 functions in 28S and 5.8S rRNA processing
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作者 KONG RuiRui HAN Wei +3 位作者 ULRICH H. Weidle NING Tao DU XiaoJuan KE Yang 《Chinese Science Bulletin》 SCIE EI CAS 2010年第17期1770-1776,共7页
1A6/DRIM has been identified as UTP20, a small subunit processome component, functioning in 18S rRNA processing. In the present study, the maturation of 28S rRNA and 5.8S rRNA was inhibited when 1A6/DRIM was silenced ... 1A6/DRIM has been identified as UTP20, a small subunit processome component, functioning in 18S rRNA processing. In the present study, the maturation of 28S rRNA and 5.8S rRNA was inhibited when 1A6/DRIM was silenced in HeLa cells; and coincidently, an accumulation of 32S rRNA precursor was observed. Immunoprecipitation was performed with the anti-1A6/DRIM antibody, followed by Northern blot with the ITS2 probe. The results showed that 1A6/DRIM was associated with both 32S and 12S rRNA precursors in vivo. The expression profile of 1A6/DRIM during rRNA processing was investigated by sucrose density gradient fractionation in combination with Western blot analysis. The results demonstrated that 1A6/DRIM was involved in the pre-60S particles in addition to the pre-40S particles and co-sediment with the 32S and 12S rRNA precursors in the nucleolus. Furthermore, the interaction of U8 snoRNA with 1A6/DRIM was revealed by immunoprecipitation. These results demonstrated that 1A6/DRIM interacted with both 32S rRNA and U8 snoRNA, being involved in 28S rRNA and 5.8S rRNA processing. 展开更多
关键词 RRNA基因 加工过程 SNORNA 职能 人类 HELA细胞 免疫印迹分析 免疫沉淀
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