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Splicing defect of StDRO2 intron 1 promotes potato root growth by disturbing auxin transport to adapt to drought stress
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作者 Jianping Zhao Baolin Yao +24 位作者 Ziai Peng Xinyue Yang Kuixiu Li Xiaoyan Zhang Haiyan Zhu Xuan Zhou Meixian Wang Lihui Jiang Xie He Yan Liang Xiaoping Zhan Xiaoran Wang Yuliang Dai Yanfen Yang Ao Yang Man Dong Suni Shi Man Lu Yi Zhao Mingyun Shen Liwei Guo Changning Liu Hongji Zhang Decai Yu Yunlong Du 《Horticultural Plant Journal》 2025年第2期706-720,共15页
The formation of root system architecture(RSA)plays a crucial role in plant growth.OsDRO1 is known to have a function in controlling RSA in rice,however,the role of potato StDRO2,a homolog of rice OsDRO1,in root growt... The formation of root system architecture(RSA)plays a crucial role in plant growth.OsDRO1 is known to have a function in controlling RSA in rice,however,the role of potato StDRO2,a homolog of rice OsDRO1,in root growth remains unclear.In this study,we obtained potato dro2 mutant lines by Clustered Regularly Interspaced Short Palindromic Repeats-CRISPR-Associated 9(CRISPR/Cas9)-mediated genome editing system.The mutant lines were generated from a splicing defect of the StDRO2 intron 1,which causes a nonsense mutation in StDRO2.Furthermore,the secondary structure of StDRO2 mRNA analyzed with RNAfold Web Server was altered in the dro2 mutant.Mutation of StDRO2 conveys potato adaptation through changing the RSA via alteration of auxin transport under drought stress.The potato dro2 lines showed higher plant height,longer root length,smaller root growth angle and increased tuber weight than the wild-type.The alteration of RSA was associated with a disturbance of IAA distribution in the dro2 mutant,and the levels of StPIN7 and StPIN10 detected by using real-time PCR were up-regulated in the roots of potato dro2 lines grown under drought stress.Moreover,the microRNAs(miRNAs)PmiREN024536 and PmiREN024486 targeted the StDRO2 gene,and auxin positively and negatively regulated the expression of StDRO2 and the miRNAs PmiREN024536 and PmiREN024486,respectively,in the potato roots.Our data shows that a regulatory network involving auxin,StDRO2,PmiREN024536 and PmiREN024486 can control RSA to convey potato fitness under drought stress. 展开更多
关键词 POTATO Root system architecture stdro2 Drought stress Auxin SPLICING MicroRNA
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马铃薯StDRO2基因的生物信息学分析 被引量:4
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作者 李葵秀 罗崇玉 +8 位作者 傅琪景 李立池 李有春 罗浩 姚宝林 刘长宁 张红骥 于德才 杜云龙 《西南农业学报》 CSCD 北大核心 2021年第4期679-688,共10页
【目的】根系构型对植物生长发育起到重要作用,DEEPER ROOTING1(DRO1)基因参与调控植物根生长角度。但是马铃薯DRO1同源基因的生物学信息还不清楚。【方法】本研究利用生物信息学软件分析了马铃薯中StDRO2蛋白的理化性质、亚细胞定位、... 【目的】根系构型对植物生长发育起到重要作用,DEEPER ROOTING1(DRO1)基因参与调控植物根生长角度。但是马铃薯DRO1同源基因的生物学信息还不清楚。【方法】本研究利用生物信息学软件分析了马铃薯中StDRO2蛋白的理化性质、亚细胞定位、保守结构域、系统发育树及蛋白质结构。【结果】发现马铃薯StDRO2基因编码亲水性不稳定蛋白,定位在细胞核,氨基酸序列具有IGT基因家族典型结构域。蛋白质二级结构预测显示StDRO2蛋白质均具有无规则卷曲、α-螺旋、β-转角和延伸链结构。通过实时定量PCR分析,马铃薯幼苗叶片中StDRO2的表达量显著高于根和茎杆。生长素处理后,根中StDRO2基因的表达量显著降低,说明该基因的表达受到生长素的负调控。【结论】StDRO2属于IGT基因家族中的一员,可能参与调控马铃薯根系构型。马铃薯StDRO2基因的生物信息学及表达水平检测为今后分析马铃薯根系发育提供了理论基础。 展开更多
关键词 stdro2基因 根系构型 马铃薯 生长素
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