从农药厂排污沟污泥中分离到一株能降解毒死蜱的新菌株，命名为R17，经生理生化和16SrDNA序列同源性分析，鉴定为Sphingopyxis terrae R17可以利用毒死蜱作为唯一碳源生长，该菌株的最适生长温度为35℃、最适pH为7～8，在此条件下培养28...从农药厂排污沟污泥中分离到一株能降解毒死蜱的新菌株，命名为R17，经生理生化和16SrDNA序列同源性分析，鉴定为Sphingopyxis terrae R17可以利用毒死蜱作为唯一碳源生长，该菌株的最适生长温度为35℃、最适pH为7～8，在此条件下培养28h后，菌落浓度达9．18×10^8cfu／mL。研究了该菌株在不同时间，对不同浓度毒死蜱的降解特性，结果：羡明，当接菌量为9．18×10^9cfu／mL时，在1d、2d、3d和4d内对10mg／L的毒死蜱降解率分别达到18．59％、31．23％、36．55％和47．69％以上；在2d内对1mg／L、5mg／L和10mg／L的毒死蜱降解率分别达到50．21％、43．46％和31．23％。展开更多
A promising bacterial strain for the biodegradation of Microcystins(MCs)was isolated from Dianchi lake in China and identified as Sphingopyxis sp.USTB-05 by the analysis of 16s rDNA.Initial MC-RR of 42.3 mg·L -1 ...A promising bacterial strain for the biodegradation of Microcystins(MCs)was isolated from Dianchi lake in China and identified as Sphingopyxis sp.USTB-05 by the analysis of 16s rDNA.Initial MC-RR of 42.3 mg·L -1 was completely degraded by USTB-05 within 36 h,which was a relatively high biodegradation rate of MC-RR.With the cell-free extract(CE)of Sphingopyxis sp.USTB-05,MC-RR was biodegraded at a more rapid biodegradation rate compared with its strain,so that initial MC-RR of 42.3 mg·L -1 was completely biodegraded within 10 h.During the bio-reaction of MC-RR catalyzed by CE,two intermediate metabolites and a dead-end product of MC-RR were observed on HPLC profiles and all of them had similar scanning profiles in the wavelength from 200 to 300 nm,indicating that the group of Adda in all products of MC-RR remained intact.展开更多
Harmful cyanobacterial blooms are a growing environmental problem worldwide in natural waters, the biodegradation is found to be the most efficient method for removing microcystins 0VICs） produced by harmful cyanobac...Harmful cyanobacterial blooms are a growing environmental problem worldwide in natural waters, the biodegradation is found to be the most efficient method for removing microcystins 0VICs） produced by harmful cyanobacteria. Based on the isolation of a promising bacterial strain of Sphingopyxis sp. USTB-05 for biodegrading MCs, we for the first time cloned and expressed a gene USTB-O5-A （HM245411） that is responsible for the first step in the biodegradation of microcystin LR （MC-LR） in E. coli DH5ct, with a cloning vector of pGEM-T easy and an expression vector of pGEX-4T-1, respectively. The cell-free extracts （CE） of recombinant E. coli DH5ct containing USTB-O5-A had high activity for biodegrading MC-LR. The initial MC-LR concentration of 40 mg/L was completely biodegraded within 1 hr in the presence of CE with a protein concentration of 0.35 mg/mL. Based on an analysis of the liquid chromatogram-mass spectrum （LC-MS）, the enzyme encoded by gene USTB-O5-A was found to be active in cleaving the target peptide bond between 3-amino-9-methoxy-2,6, 8-trimethyl-10-phenyl-deca-4,6-dienoic acid （Adda） and arginine of MC-LR, and converting cyclic MC-LR to linear MC-LR as a first product that is much less toxic than parent MC-LR, which offered direct evidence for the first step on the pathway of MC-LR biodegradation by Sphingopyxis sp. USTB-05.展开更多
A strain, USTB-05, isolated from Lake Dianchi, China, degraded the cyanobacterial toxin microcystin-RR （MC-RR） at the rate of 16.7 mg/L per day. Analysis of 16S rDNA sequence showed that the strain was Sphingopyxis ...A strain, USTB-05, isolated from Lake Dianchi, China, degraded the cyanobacterial toxin microcystin-RR （MC-RR） at the rate of 16.7 mg/L per day. Analysis of 16S rDNA sequence showed that the strain was Sphingopyxis sp. Enzymatic degradation pathways for MC-RR by Sphingopyxis sp. USTB-05 were identified. Adda-Arg peptide bond of MC-RR was cleaved and then a hydrogen and a hydroxyl were combined onto the NH2 group of Adda and the carboxyl group of arginine to form a linear molecule as intermediate product within the first few hours. Then, through dehydration reaction, two hydrogen of amino group on arginine reacted with adjacent hydroxyl on carbon to form a linear MC-RR with two small peptide rings as the final product after 24 hr. These biodegradation pathways were different from those reported for other strains, implying that MC-RR may undergo different transformations and different products were formed due to various bacteria in natural lakes and reservoirs.展开更多
A mercury resistant bacterial strain SE2 was isolated from contaminated soil.The 16 s rRNA gene sequencing confirms the strain as Sphingopyxis belongs to the Sphingomonadaceae family of the α-Proteobacteria group.The...A mercury resistant bacterial strain SE2 was isolated from contaminated soil.The 16 s rRNA gene sequencing confirms the strain as Sphingopyxis belongs to the Sphingomonadaceae family of the α-Proteobacteria group.The isolate showed high resistance to mercury with estimated concentrations of Hg that caused 50%reduction in growth（EC_（50）） of 5.97 and 6.22 mg/L and minimum inhibitory concentrations（MICs） of 32.19 and 34.95 mg/L in minimal and rich media,respectively.The qualitative detection of volatilized mercury and the presence of mercuric reductase enzyme proved that the strain SE2 can potentially remediate mercury.ICP-QQQ-MS analysis of the remaining mercury in experimental broths indicated that a maximum of 44%mercury was volatilized within 6 hr by live SE2 culture.Furthermore a small quantity（23%） of mercury was accumulated in live cell pellets.While no volatilization was caused by dead cells,sorption of mercury was confirmed.The mercuric reductase gene merA was amplified and sequenced.Homology was observed among the amino acid sequences of mercuric reductase enzyme of different organisms from a-Proteobacteria and ascomycota groups,展开更多
A promising bacterial strain for biodegradingmicrocystin-LR(MC-LR)as the sole carbon and nitrogensource was successfully isolated from Lake Dianchi,China.The strain was identified as Sphingopyxis sp.USTB-05,which was ...A promising bacterial strain for biodegradingmicrocystin-LR(MC-LR)as the sole carbon and nitrogensource was successfully isolated from Lake Dianchi,China.The strain was identified as Sphingopyxis sp.USTB-05,which was the first isolated MCs-biodegradingSphingopyxis sp.in China.The average biodegradationrate of MC-LR by Sphingopyxis sp.USTB-05 was 28.8mg·L^(-1)per day,which was apparently higher than those ofother bacteria reported so far.The optimal temperature andpH for both strain USTB-05 growth and MC-LRbiodegradation were 30℃and 7.0,respectively.Therelease of MC-LR from the cyanobacterial cells collectedfrom Lake Guishui and the biodegradation of MC-LR byboth strain and cell-free extract(CE)were investigated.The results indicated that MC-LR with the initialconcentration of 4.0 mg·L^(-1)in water was biodegraded bySphingopyxis sp.USTB-05 within 4 d,while MC-LR withthe initial concentration of 28.8 mg·L^(-1)could be completelyremoved in 3 h by CE of Sphingopyxis sp.USTB-05 containing 350 mg·L^(-1)protein.During enzymaticbiodegradation of MC-LR,two intermediate metabolitesand a dead-end product were observed on an HPLCchromatogram.Moreover,the similar scanning profiles ofMC-LR and its metabolic products indicate that the Addaside-chain of MC-LR was kept intact in all products.展开更多
文摘从农药厂排污沟污泥中分离到一株能降解毒死蜱的新菌株，命名为R17，经生理生化和16SrDNA序列同源性分析，鉴定为Sphingopyxis terrae R17可以利用毒死蜱作为唯一碳源生长，该菌株的最适生长温度为35℃、最适pH为7～8，在此条件下培养28h后，菌落浓度达9．18×10^8cfu／mL。研究了该菌株在不同时间，对不同浓度毒死蜱的降解特性，结果：羡明，当接菌量为9．18×10^9cfu／mL时，在1d、2d、3d和4d内对10mg／L的毒死蜱降解率分别达到18．59％、31．23％、36．55％和47．69％以上；在2d内对1mg／L、5mg／L和10mg／L的毒死蜱降解率分别达到50．21％、43．46％和31．23％。
基金Supported by the State Key Development Program for Basic Research of China（2008CB418105） the National Natural Science Foundation of China（203777008 20621703）+1 种基金 the State Key Joint Laboratory of Environment Simulation and Pollution Control（09K08ESPCT） the Educational Committee of Beijing
文摘A promising bacterial strain for the biodegradation of Microcystins(MCs)was isolated from Dianchi lake in China and identified as Sphingopyxis sp.USTB-05 by the analysis of 16s rDNA.Initial MC-RR of 42.3 mg·L -1 was completely degraded by USTB-05 within 36 h,which was a relatively high biodegradation rate of MC-RR.With the cell-free extract(CE)of Sphingopyxis sp.USTB-05,MC-RR was biodegraded at a more rapid biodegradation rate compared with its strain,so that initial MC-RR of 42.3 mg·L -1 was completely biodegraded within 10 h.During the bio-reaction of MC-RR catalyzed by CE,two intermediate metabolites and a dead-end product of MC-RR were observed on HPLC profiles and all of them had similar scanning profiles in the wavelength from 200 to 300 nm,indicating that the group of Adda in all products of MC-RR remained intact.
基金supported by the National Natural Science Foundation of China (No. 21177009)
文摘Harmful cyanobacterial blooms are a growing environmental problem worldwide in natural waters, the biodegradation is found to be the most efficient method for removing microcystins 0VICs） produced by harmful cyanobacteria. Based on the isolation of a promising bacterial strain of Sphingopyxis sp. USTB-05 for biodegrading MCs, we for the first time cloned and expressed a gene USTB-O5-A （HM245411） that is responsible for the first step in the biodegradation of microcystin LR （MC-LR） in E. coli DH5ct, with a cloning vector of pGEM-T easy and an expression vector of pGEX-4T-1, respectively. The cell-free extracts （CE） of recombinant E. coli DH5ct containing USTB-O5-A had high activity for biodegrading MC-LR. The initial MC-LR concentration of 40 mg/L was completely biodegraded within 1 hr in the presence of CE with a protein concentration of 0.35 mg/mL. Based on an analysis of the liquid chromatogram-mass spectrum （LC-MS）, the enzyme encoded by gene USTB-O5-A was found to be active in cleaving the target peptide bond between 3-amino-9-methoxy-2,6, 8-trimethyl-10-phenyl-deca-4,6-dienoic acid （Adda） and arginine of MC-LR, and converting cyclic MC-LR to linear MC-LR as a first product that is much less toxic than parent MC-LR, which offered direct evidence for the first step on the pathway of MC-LR biodegradation by Sphingopyxis sp. USTB-05.
基金supported by the Chinese National Key Project for Basic Research (No.2008CB418105)the National Natural Science Foundation of China(No.20621703,20477050)the Important-Direction-Project funded by the Chinese Academy of Sciences
文摘A strain, USTB-05, isolated from Lake Dianchi, China, degraded the cyanobacterial toxin microcystin-RR （MC-RR） at the rate of 16.7 mg/L per day. Analysis of 16S rDNA sequence showed that the strain was Sphingopyxis sp. Enzymatic degradation pathways for MC-RR by Sphingopyxis sp. USTB-05 were identified. Adda-Arg peptide bond of MC-RR was cleaved and then a hydrogen and a hydroxyl were combined onto the NH2 group of Adda and the carboxyl group of arginine to form a linear molecule as intermediate product within the first few hours. Then, through dehydration reaction, two hydrogen of amino group on arginine reacted with adjacent hydroxyl on carbon to form a linear MC-RR with two small peptide rings as the final product after 24 hr. These biodegradation pathways were different from those reported for other strains, implying that MC-RR may undergo different transformations and different products were formed due to various bacteria in natural lakes and reservoirs.
基金the University of Newcastle and CRCCARE for scholarship
文摘A mercury resistant bacterial strain SE2 was isolated from contaminated soil.The 16 s rRNA gene sequencing confirms the strain as Sphingopyxis belongs to the Sphingomonadaceae family of the α-Proteobacteria group.The isolate showed high resistance to mercury with estimated concentrations of Hg that caused 50%reduction in growth（EC_（50）） of 5.97 and 6.22 mg/L and minimum inhibitory concentrations（MICs） of 32.19 and 34.95 mg/L in minimal and rich media,respectively.The qualitative detection of volatilized mercury and the presence of mercuric reductase enzyme proved that the strain SE2 can potentially remediate mercury.ICP-QQQ-MS analysis of the remaining mercury in experimental broths indicated that a maximum of 44%mercury was volatilized within 6 hr by live SE2 culture.Furthermore a small quantity（23%） of mercury was accumulated in live cell pellets.While no volatilization was caused by dead cells,sorption of mercury was confirmed.The mercuric reductase gene merA was amplified and sequenced.Homology was observed among the amino acid sequences of mercuric reductase enzyme of different organisms from a-Proteobacteria and ascomycota groups,
基金The first and second authors did same contribution to this paper.This work was supported by the National Natural Science Foundation of China(Grant No.203777008)State Key Joint Laboratory of Environment Simulation and Pollution Control(No.09K08ESPCT),and Educational Committee of Beijing.
文摘A promising bacterial strain for biodegradingmicrocystin-LR(MC-LR)as the sole carbon and nitrogensource was successfully isolated from Lake Dianchi,China.The strain was identified as Sphingopyxis sp.USTB-05,which was the first isolated MCs-biodegradingSphingopyxis sp.in China.The average biodegradationrate of MC-LR by Sphingopyxis sp.USTB-05 was 28.8mg·L^(-1)per day,which was apparently higher than those ofother bacteria reported so far.The optimal temperature andpH for both strain USTB-05 growth and MC-LRbiodegradation were 30℃and 7.0,respectively.Therelease of MC-LR from the cyanobacterial cells collectedfrom Lake Guishui and the biodegradation of MC-LR byboth strain and cell-free extract(CE)were investigated.The results indicated that MC-LR with the initialconcentration of 4.0 mg·L^(-1)in water was biodegraded bySphingopyxis sp.USTB-05 within 4 d,while MC-LR withthe initial concentration of 28.8 mg·L^(-1)could be completelyremoved in 3 h by CE of Sphingopyxis sp.USTB-05 containing 350 mg·L^(-1)protein.During enzymaticbiodegradation of MC-LR,two intermediate metabolitesand a dead-end product were observed on an HPLCchromatogram.Moreover,the similar scanning profiles ofMC-LR and its metabolic products indicate that the Addaside-chain of MC-LR was kept intact in all products.
