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A New Next-Generation Sequencing-Based Assay for Concurrent Preimplantation Genetic Diagnosis of Charcot-Marie-Tooth Disease Type 1A and Aneuploidy Screening 被引量:2
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作者 Baoheng Gui Pu Yang +6 位作者 Zhongyuan Yao Yanping Li Donge Liu Nenghui Liu Sijia Lu Desheng Liang Lingqian Wu 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2016年第3期155-159,共5页
Charcot-Marie-Tooth (CMT) disease is the most common hereditary neuropathy, with a population prevalence of 1 in 2500. CMT disease type 1A (CMT1A), accounting for ~70% of CMT1 cases and ~ 50% of all CMT cases, is ... Charcot-Marie-Tooth (CMT) disease is the most common hereditary neuropathy, with a population prevalence of 1 in 2500. CMT disease type 1A (CMT1A), accounting for ~70% of CMT1 cases and ~ 50% of all CMT cases, is transmitted in an autosomal dominant manner. CMT1A maps to chromo- some 17pl 1.2 and is caused, in the majority of cases, by a 1.4- Mb tandem duplication that includes the peripheral myelin protein22 (PMP22) gene (Li et al., 2013). The disease usually presents in the first 20 years of age, causing difficulty in walking or running, distal symmetrical muscle weakness and wasting, and sensory loss (van Paassen et al., 2014). 展开更多
关键词 A New Next-Generation sequencing-based Assay for Concurrent Preimplantation Genetic Diagnosis of Charcot-Marie-Tooth Disease Type 1A and Aneuploidy Screening CNVs
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Identification of a novel planthopper resistance gene from wild rice(Oryza rufipogon Griff.) 被引量:4
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作者 Meng Yang Jiebin Lin +5 位作者 Ling Cheng Hailian Zhou Shu Chen Fang Liu Rongbai Li Yongfu Qiu 《The Crop Journal》 SCIE CSCD 2020年第6期1057-1070,共14页
Rice planthoppers,including brown planthopper(BPH)and white-backed planthopper(WBPH),are the most destructive pests in Asian rice cultivation regions.Planthopper resistance genes that have been mapped and characterize... Rice planthoppers,including brown planthopper(BPH)and white-backed planthopper(WBPH),are the most destructive pests in Asian rice cultivation regions.Planthopper resistance genes that have been mapped and characterized advance our understanding of underlying resistance mechanisms and facilitate the breeding of resistant varieties,thereby contributing to an efficient pest management strategy.In this study,a novel resistance gene Bph38 derived from the wild rice species Oryza rufipogon Griff.was found to confer high resistance to BPH and WBPH.Conventional mapping was performed to identify regions associated with BPH and WBPH resistance,and two mapping efforts led to the same region on chromosome 4 flanked by markers RM16563 and RM16763.Bulked-segregant analysis and next-generation sequencing were performed using the same population to detect the resistance gene.Conventional mapping narrowed the region to a 12.3-Mb segment,and fine mapping using BC1 F2 recombinants identified a 79-kb segment flanked by markers YM112 and YM190.Near-isogenic lines(NILs)carrying Bph38 in the 9311(indica)and BR54(japonica)genetic backgrounds were developed by crossing and backcrossing with marker-assisted selection.The agronomic traits and BPH and WBPH resistance of the NILs were similar to those of the recurrent parents.Mandatory feeding and host-choice tests revealed that Bph38 showed both antibiotic and antixenotic effects in both insects,with stronger effects in indica-background lines.Further fine mapping and characterization of the major gene may result in map-based cloning of the gene and allow its application in breeding insectresistant rice varieties. 展开更多
关键词 Oryza rufipogon Griff. Planthopper resistance Next-generation sequencing-based bulked-segregant analysis Gene mapping Resistance mechanism
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Chemical genomics reveals inhibition of breast cancer lung metastasis by Ponatinib via c-Jun 被引量:8
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作者 Wei Shao Shasha Li +5 位作者 Lu Li Kequan Lin Xinhong Liu Haiyan Wang Huili Wang Dong Wang 《Protein & Cell》 SCIE CAS CSCD 2019年第3期161-177,共17页
Metastasis is the leading cause of human cancer deaths.Unfortunately,no approved drugs are available for antimetastatic treatment.In our study,high-throughput sequencing-based high-throughput screening(HTS^2)and a bre... Metastasis is the leading cause of human cancer deaths.Unfortunately,no approved drugs are available for antimetastatic treatment.In our study,high-throughput sequencing-based high-throughput screening(HTS^2)and a breast cancer lung metastasis(BCLM)-associated gene signature were combined to discover anti-metastatic drugs.After screening of thousands of compounds,we identified Ponatinib as a BCLM inhibitor.Ponatinib significantly inhibited the migration and mammosphere formation of breast cancer cells in vitro and blocked BCLM in multiple mouse models.Mechanistically,Ponatinib represses the expression of BCLM-associated genes mainly through the ERK/c-Jun signaling pathway by inhibiting the transcription of JUN and accelerating the degradation of c-Jun protein.Notably,JUN expression levels were positively correlated with BCLM-associated gene expression and lung metastases in breast cancer patients.Collectively,we established a novel approach for the discovery of anti-metastatic drugs,identified Ponatinib as a new drug to inhibit BCLM and revealed c-Jun as a crucial factor and potential drug target for BCLM.Our study may facilitate the therapeutic treatment of BCLM as well as other metastases. 展开更多
关键词 anti-metastatic drug discovery gene expression signature HIGH-THROUGHPUT sequencing-based HIGH-THROUGHPUT screening PONATINIB breast cancer lung metastasis C-JUN
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