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木薯SCARECROW-LIKE(SCL)基因克隆、生物信息学及非生物胁迫下表达分析 被引量:2
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作者 樊铸硼 罗兴录 +3 位作者 单忠英 黄堂伟 程隆祥 吴美艳 《南方农业学报》 CAS CSCD 北大核心 2020年第8期1888-1895,共8页
【目的】克隆木薯SCARECROW-LIKE(MeSCL)基因,对其进行生物信息学分析,并检测其在非生物胁迫下的表达情况,为深入研究木薯MeSCL基因响应非生物胁迫的调控机制提供理论参考。【方法】以木薯品种D346为材料,采用RT-PCR克隆MeSCL基因编码区... 【目的】克隆木薯SCARECROW-LIKE(MeSCL)基因,对其进行生物信息学分析,并检测其在非生物胁迫下的表达情况,为深入研究木薯MeSCL基因响应非生物胁迫的调控机制提供理论参考。【方法】以木薯品种D346为材料,采用RT-PCR克隆MeSCL基因编码区(CDS)序列,并利用生物信息学分析软件进行序列特征分析,采用实时荧光定量PCR检测其在干旱、盐、氧化和低温胁迫下木薯叶片中的表达情况。【结果】克隆获得的MeSCL基因编码区(CDS)序列全长1655 bp,与参考序列(GenBank登录号LOC110627921)仅存在2个碱基的差异,开放阅读框(ORF)的长度为1560 bp,编码519个氨基酸,编码蛋白分子量为57.84 kD,等电点(pI)为6.08,脂肪系数为80.46%,总平均亲水性指数为-0.195,为亲水性蛋白,含有1个信号肽、6个从内部到外部的跨膜螺旋区和5个从外部到内部的跨膜螺旋区,定位于细胞核和内质网中,属于GRAS蛋白家族成员,具有该家族的保守结构域。MeSCL蛋白三级结构模型显示,该蛋白含有14个典型的α螺旋、10个β-折叠和36个β-转角。MeSCL蛋白与橡树HbSCL蛋白的相似性最高,为90.80%,与蓖麻RcSCR、胡杨PeSCL、毛果杨PtSCR、可可树Tc SCR和哥伦比亚锦葵HuSCL蛋白的相似性在80.00%左右。MeSCL基因受干旱、盐、氧化和低温胁迫诱导表达量整体呈升高趋势,但在不同处理时间的表达量存在明显差异,其中,干旱和氧化胁迫下,MeSCL基因均在处理24 h时表达量最高,分别是对照的6.05和11.17倍,而盐和低温胁迫下,MeSCL基因均在处理6 h时表达量最高,分别是对照的11.76和3.80倍。【结论】MeSCL基因参与木薯植株的非生物胁迫响应,正向调控其抗非生物胁迫能力。 展开更多
关键词 木薯 scarecrow-like(SCL)基因 基因克隆 生物信息学分析 非生物胁迫 表达分析
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植物SCARECROW-LIKE蛋白研究进展
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作者 唐泽珺 彭伟业 +3 位作者 李魏 杨洋 戴良英 王冰 《分子植物育种》 CAS 北大核心 2024年第6期1918-1925,共8页
SCARECROW-LIKE(SCL)蛋白是GRAS转录因子家族的重要成员,可以调控下游基因,对植物根、茎、叶、种子的生长发育以及外界信号的响应具有重要的调控作用。本研究介绍了SCL蛋白对植物中皮层的生长发育、不定根和腋生分生组织的形成、叶绿素... SCARECROW-LIKE(SCL)蛋白是GRAS转录因子家族的重要成员,可以调控下游基因,对植物根、茎、叶、种子的生长发育以及外界信号的响应具有重要的调控作用。本研究介绍了SCL蛋白对植物中皮层的生长发育、不定根和腋生分生组织的形成、叶绿素合成的影响,SCL蛋白在赤霉素信号、光信号、胁迫信号中的作用以及SCL蛋白参与miRNA表达调控等。通过研究结果以期增加人们对SCL家族的进一步了解,为该类蛋白在植物生长发育、抗病抗逆等方面的研究与应用提供参考。 展开更多
关键词 scarecrow-like蛋白 生长发育 信号转导 miRNA调控
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csn-miR171b-3p_2 targets CsSCL6-4 to participate in the defense against drought stress in tea plant
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作者 Caiyun Tian Chengzhe Zhou +9 位作者 Shengjing Wen Niannian Yang Jiayao Tan Cheng Zhang Lele Jiang Anru Zheng Xiaowen Hu Zhongxiong Lai Chen Zhu Yuqiong Guo 《Horticultural Plant Journal》 2026年第1期172-188,共17页
Drought stress is a serious natural challenge for tea plants that significantly affects tea yield and quality.miR171s play critical roles in plant stress responses,however,their role in drought stress tolerance in tea... Drought stress is a serious natural challenge for tea plants that significantly affects tea yield and quality.miR171s play critical roles in plant stress responses,however,their role in drought stress tolerance in tea plants(Camellia sinensis)is poorly understood.This study experimentally verified the expression patterns of csn-miR171b-3p_2 and its target,scarecrow-like(SCL).We found that csn-miR171b-3p_2 could target and regulate CsSCL6-4 to play an important role in the defense against drought stress in tea plants.CsSCL6-4 is located in the nucleus and is selfactivated in vivo.In addition,we obtained 819 putative binding regions of CsSCL6-4 using DNA affinity purification sequencing analysis,which were assigned to 786 different genes,four of which were drought-resistant genes(CsPrx,CsSDR,CsFAD7,and CsCER1).Yeast one-hybrid and dual-luciferase reporter assays revealed that CsSCL6-4 directly promoted the expression of these four drought resistance genes by binding motifs 1/2/3 in their promoter regions.Both overexpression and suppression of CsSCL6-4 proved that CsSCL6-4 participated in the defense against drought stress in tea plants by regulating the expression of CsPrx,CsSDR,CsFAD7,and CsCER1.In addition,suppression of csn-miR171b-3p_2 expression significantly increased the expression of CsSCL6-4 and activated CsSCL6-4-bound gene transcription under drought stress.Therefore,the csn-miR171b-3p_2-CsSCL6-4 module participates in tea plant resistance to drought stress by promoting the expression of drought resistance genes.Our results revealed the function of csn-miR171b-3p_2 in tea plants and provided new insights into the mechanism of tea plant resistance to drought stress. 展开更多
关键词 Camellia sinensis miR171 scarecrow-like Drought stress
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玉米ZmSCL7的克隆及功能研究 被引量:8
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作者 郭鹏 邢新 +1 位作者 金华 董燕 《中国农业科学》 CAS CSCD 北大核心 2013年第12期2584-2591,共8页
【目的】对玉米SCARECROW-LIKE 7(SCL7)进行克隆与表达研究,了解该基因表达的分子机制及其应用。【方法】以玉米叶片总RNA为模板,根据同源克隆策略设计简并引物,利用RT-PCR结合RACE技术,获得ZmSCL7的全长cDNA序列。利用同源性比对进行... 【目的】对玉米SCARECROW-LIKE 7(SCL7)进行克隆与表达研究,了解该基因表达的分子机制及其应用。【方法】以玉米叶片总RNA为模板,根据同源克隆策略设计简并引物,利用RT-PCR结合RACE技术,获得ZmSCL7的全长cDNA序列。利用同源性比对进行序列分析,通过Northern杂交分析ZmSCL7在不同逆境胁迫下的表达特征,对转基因烟草进行Western blot分析,并测定最大光化学效率、叶绿素、丙二醛和脯氨酸含量验证该基因的抗盐功能。【结果】获得ZmSCL7全长cDNA序列1 653 bp,编码550个氨基酸。Northern杂交表明该基因在NaCl、H2O2和低温处理条件下上调表达,在ABA处理条件下下调表达。与对照相比,转ZmSCL7烟草在200 mmol.L-1NaCl时萌发受到较小抑制,且最大光化学效率、叶绿素和脯氨酸含量上升,丙二醛含量下降。【结论】ZmSCL7作为一个转录因子受多种逆境胁迫诱导,该基因的过量表达提高了烟草的抗盐性。 展开更多
关键词 玉米 ZmSCL7 NORTHERN杂交 Western杂交 功能研究
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Conservation and Diversification of the SHR-SCR- SCL23 Regulatory Network in the Development of the Functional Endodermis in Arabidopsis Shoots 被引量:8
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作者 Eun Kyung Yoon Souvik Dhar +9 位作者 Mi-Hyun Lee Jae Hyo Song Shin Ae Lee Gyuree Kim Sejeong Jang Ji Won Choi Jeong-Eun Choe Jeong Hoe Kim Myeong Min Lee Jun Lim 《Molecular Plant》 SCIE CAS CSCD 2016年第8期1197-1209,共13页
Development of the functional endodermis of Arabidopsis thaliana roots is controlled, in part, by GRAS transcription factors, namely SHORT-ROOT (SHR), SCARECROW (SCR), and SCARECROW-LIKE 23 (SCL23). Recently, it... Development of the functional endodermis of Arabidopsis thaliana roots is controlled, in part, by GRAS transcription factors, namely SHORT-ROOT (SHR), SCARECROW (SCR), and SCARECROW-LIKE 23 (SCL23). Recently, it has been shown that the SHR-SCR-SCL23 regulatory module is also essential for spec- ification of the endodermis (known as the bundle sheath) in leaves. Nevertheless, compared with what is known about the role of the SHR-SCR-SCL23 regulatory network in roots, the molecular interactions of SHR, SCR, and SCL23 are much less understood in shoots. Here, we show that SHR forms protein com- plexes with SCL23 to regulate transcription of SCL23 in shoots, similar to the regulation mode of SCR expression. Our results indicate that SHR acts as master regulator to directly activate the expression of SCR and SCL23. In the SHR-SCR-SCL23 network, we found a previously uncharacterized negative feed- back loop whereby SCL23 modulates SHR levels. Through molecular, genetic, physiological, and morpho- logical analyses, we also reveal that the SHR-SCR-SCL23 module plays a key role in the formation of the endodermis (known as the starch sheath) in hypocotyls. Taken together, our results provide new insights into the regulatory role of the SHR-SCR-SCL23 network in the endodermis development in both roots and shoots. 展开更多
关键词 ENDODERMIS gene regulatory network SHORT-ROOT SCARECROW scarecrow-like 23 transcription factor
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