半乳糖凝集素(Galectin)作为动物凝集素家族的一员,是一种重要的免疫因子,在脊椎动物和无脊椎动物中都参与了重要的免疫防御反应。为明确魁蚶(Scapharca broughtonii)半乳糖凝集素基因的结构特征、组织分布及其对病原菌刺激的免疫反应规...半乳糖凝集素(Galectin)作为动物凝集素家族的一员,是一种重要的免疫因子,在脊椎动物和无脊椎动物中都参与了重要的免疫防御反应。为明确魁蚶(Scapharca broughtonii)半乳糖凝集素基因的结构特征、组织分布及其对病原菌刺激的免疫反应规律,本研究从构建的魁蚶转录组文库中筛选得到半乳糖凝集素基因部分序列,通过c DNA末端快速扩增(rapid amplication of c DNA ends,RACE)技术获得该基因c DNA全长序列(命名为Sb Gal)。序列和结构分析表明,该c DNA全长3120bp,编码554个氨基酸,是一个含有4个糖识别结构域(CRD)的且在双壳贝类中较为独特的半乳糖凝集素;预测蛋白的分子量(Mw)为63.3158 k Da,理论等电点(p I)为4.99。同源性及系统分析表明,Sb Gal基因与美洲牡蛎、合浦珠母贝、海湾扇贝galectin的同源性分别为70%、65%、46%,Sb Gal基因四个CRD彼此的相似性为36%—41%。实时荧光定量PCR(q RT-PCR)结果表明:Sb Gal m RNA在魁蚶血细胞、斧足、闭壳肌、外套膜、鳃和肝胰腺中均有表达,血细胞中的表达量最高,在肝胰腺中的表达量最低;注射鳗弧菌后,相对于对照组,Sb Gal基因在所检测的每个组织中m RNA水平上的表达量都显著上调(P<0.01),而且表达量具有显著的时间依赖性和瞬时表达趋势,呈现先升高后降低的趋势。展开更多
The habitat suitability index(HSI) model was used to identify potential sites for sustainable restoration of ark shell, Scapharca subcrenata(Lischke), in the shallow water of Xiaoheishan Island, using a geographic inf...The habitat suitability index(HSI) model was used to identify potential sites for sustainable restoration of ark shell, Scapharca subcrenata(Lischke), in the shallow water of Xiaoheishan Island, using a geographic information system framework. The seven input variables of the HSI model were sediment composition, water temperature, salinity, dissolved oxygen, water depth, p H, and ammonia. A non-linear suitability function for each variable factor was used to transform the value into a normalized quality index ranging from 0(nonsuitability) to 1(best suitability). In present study, the analysis of habitat suitability was conducted for four seasons respectively. The majority of the study area has a high HSI value(>0.6) year round, which implies a strong suitability for restoration, with the optimal habitat located on the eastern side of the island.Correspondence analysis indicated that water temperature was the main factor causing seasonal variation,while sediment composition and water depth were the two major reasons for the differences in sites. The results of this work could provide support for restoration decision making through identification of potential sites for sustainable establishment of S. subcrenata.展开更多
The relationships between nutrient dynamics,microbial community,and macrofauna are important in bioremediation systems.In this study,we examined the effects of marine clam Scapharca subcrenata sedimentary activities o...The relationships between nutrient dynamics,microbial community,and macrofauna are important in bioremediation systems.In this study,we examined the effects of marine clam Scapharca subcrenata sedimentary activities on the microbial assemblages,benthic nutrient chemistry,and its subsequent remediation impacts on organic effluent in the sediment of an aquaculture wastewater bioremediation system.The results showed that microbial community composition differed significantly in the clam area(ANOSIM,R=0.707,P=0.037).Pyrosequencing of bacterial 16S rRNA gene revealed a total of 48 unique phyla,79 classes,107 orders,197 families,and 321 genera amongst all samples.The most dominant bacterial assemblages were Proteobacteria,Bacteroidetes,Acidobacteria,Firmicutes,Verrucomicrobia,and Actinobacteria,with Bacteroidetes and Firmicutes significantly higher in all treatment samples than control(P<0.001).All dominant phyla in the list were shared across all samples and accounted for 89%(control)and 97%(treatment)of the total 16S rRNA.The nutrient flux rates from the sediments into the water(treatment group)were 51%(ammonium),88%(nitrate),77%(nitrite)and 45%(phosphate)higher,relative to the control implying increased mineralization,degradability,and mobility of the benthic nutrients.Similarly,significantly increased oxygen consumption rates were evident in the clam area signifying improved oxygen distribution within the sediment.The organic effluent contents associated with total-organic matter,carbon,nitrogen,and,phosphate were lower among the clam treatments relative to the control.Our results describe the potential roles and mechanisms contributed by marine bivalve S.subcrenata on benthic-bacterial-community assembly,nutrient balance,and effluent reduction in the sediments of aquaculture wastewaters bioremediation system.展开更多
Ocean warming is altering the habitats of marine invertebrates,which has resulted in an increased physiological stress to marine molluscs,especially those intertidal bivalves,such as the ark shell Scapharca broughtoni...Ocean warming is altering the habitats of marine invertebrates,which has resulted in an increased physiological stress to marine molluscs,especially those intertidal bivalves,such as the ark shell Scapharca broughtonii.We investigated the physiological and transcriptional responses of ark shells to acute and chronic thermal stress results showed that at 33℃,a significantly higher cumulative mortality(55.7%)occurred under acute thermal stress than chronic thermal stress.The apoptosis rate of hemocytes was sustained at higher levels and the necrosis rate was increased significantly in a time-dependent manner under acute thermal stress.However,under chronic thermal stress,the apoptosis and necrosis rates exhibited similar change trends:a rapid increase followed by a gradual decline and sustained at a relatively high level until the end of the experiment.The expressions of heat shock protein genes(HSP20 and HSP90),apoptosis-related genes(TRAF6,GRP78,NIX,and Casp-3),antioxidative-related genes(GST and MRP)and cellular detoxification-related genes(HbⅡB,NOS-1,HO-1,and ENO-1)were upregulated significantly under both acute and chronic thermal stresses.These results demonstrated that the anti-apoptotic system,antioxidant defense system,cellular detoxification system,and heat shock proteins(HSPs)played vital roles for ark shells in response to thermal stress.As acute thermal stress can result in irreversible damage to marine molluscs,it is thus advised that chronic thermal stress should be used to select thermal-resistant ark shell strains.展开更多
In order to study the food consumption, preference and day-night predatorydifference of Asterias amurensis on Scapharca broughtonii, the experiments werecarried out at the temperatures ranging from 16 ℃ to 20 ℃, sal...In order to study the food consumption, preference and day-night predatorydifference of Asterias amurensis on Scapharca broughtonii, the experiments werecarried out at the temperatures ranging from 16 ℃ to 20 ℃, salinity of 28.2 ± 2.1,dissolved oxygen of 7.5±0.7 mg/L and pH of 8.0 ± 0.3.The results provided basic datafor promoting steady and healthy development of the multiplication and cultivation of S.broughtonii. The results of food consumption suggested that the food intake of starfishincreased with the density of S. broughtonii at all conditions. The food consumption ofstarfish in different sizes on S. broughtonii in the same size had no significant difference(p>0.05), but it was significantly different among S. broughtonii in different sizes. Thestarfish had the highest feeding rate on the smallest S. broughtonii. Our findings alsoverified the positive relation between the weight of food intake of starfish in differentsizes on the density and size of S. broughtonii. The feeding rhythm of starfish onS. broughtonii in different sizes showed a certain day-night difference, higher at nightthan in the day. The maximum food consumption occurred when the size of S.broughtonii became larger. The results showed that 30 ind/m2 was the suitable seabottom sowing density for S. broughtonii. Our data indicated that the ability to avoidpredators and rivals increased as the shell length rose. Based on prey selectivity,bivalves that have a lower commercial value may be used to clear away A. amurensis.展开更多
文摘半乳糖凝集素(Galectin)作为动物凝集素家族的一员,是一种重要的免疫因子,在脊椎动物和无脊椎动物中都参与了重要的免疫防御反应。为明确魁蚶(Scapharca broughtonii)半乳糖凝集素基因的结构特征、组织分布及其对病原菌刺激的免疫反应规律,本研究从构建的魁蚶转录组文库中筛选得到半乳糖凝集素基因部分序列,通过c DNA末端快速扩增(rapid amplication of c DNA ends,RACE)技术获得该基因c DNA全长序列(命名为Sb Gal)。序列和结构分析表明,该c DNA全长3120bp,编码554个氨基酸,是一个含有4个糖识别结构域(CRD)的且在双壳贝类中较为独特的半乳糖凝集素;预测蛋白的分子量(Mw)为63.3158 k Da,理论等电点(p I)为4.99。同源性及系统分析表明,Sb Gal基因与美洲牡蛎、合浦珠母贝、海湾扇贝galectin的同源性分别为70%、65%、46%,Sb Gal基因四个CRD彼此的相似性为36%—41%。实时荧光定量PCR(q RT-PCR)结果表明:Sb Gal m RNA在魁蚶血细胞、斧足、闭壳肌、外套膜、鳃和肝胰腺中均有表达,血细胞中的表达量最高,在肝胰腺中的表达量最低;注射鳗弧菌后,相对于对照组,Sb Gal基因在所检测的每个组织中m RNA水平上的表达量都显著上调(P<0.01),而且表达量具有显著的时间依赖性和瞬时表达趋势,呈现先升高后降低的趋势。
基金The National Natural Science Foundation of China under contract No.41206102the Program of the Key Laboratory of Marine Ecology and Environmental Science and Engineering,State Oceanic Administration under contract No.MESE-2013-01
文摘The habitat suitability index(HSI) model was used to identify potential sites for sustainable restoration of ark shell, Scapharca subcrenata(Lischke), in the shallow water of Xiaoheishan Island, using a geographic information system framework. The seven input variables of the HSI model were sediment composition, water temperature, salinity, dissolved oxygen, water depth, p H, and ammonia. A non-linear suitability function for each variable factor was used to transform the value into a normalized quality index ranging from 0(nonsuitability) to 1(best suitability). In present study, the analysis of habitat suitability was conducted for four seasons respectively. The majority of the study area has a high HSI value(>0.6) year round, which implies a strong suitability for restoration, with the optimal habitat located on the eastern side of the island.Correspondence analysis indicated that water temperature was the main factor causing seasonal variation,while sediment composition and water depth were the two major reasons for the differences in sites. The results of this work could provide support for restoration decision making through identification of potential sites for sustainable establishment of S. subcrenata.
基金This study was supported by the Zhejiang Public Welfare Technology Research Program of China(ZPWTP)(No.LGN18C190008)the Zhejiang Provincial Natural Science Foundation of China(No.LQ20C190003)the Ningbo Municipal Natural Science Foundation(Nos.2019A610421,2019A610443),and the K.C.Wong Magna Fund in Ningbo University.
文摘The relationships between nutrient dynamics,microbial community,and macrofauna are important in bioremediation systems.In this study,we examined the effects of marine clam Scapharca subcrenata sedimentary activities on the microbial assemblages,benthic nutrient chemistry,and its subsequent remediation impacts on organic effluent in the sediment of an aquaculture wastewater bioremediation system.The results showed that microbial community composition differed significantly in the clam area(ANOSIM,R=0.707,P=0.037).Pyrosequencing of bacterial 16S rRNA gene revealed a total of 48 unique phyla,79 classes,107 orders,197 families,and 321 genera amongst all samples.The most dominant bacterial assemblages were Proteobacteria,Bacteroidetes,Acidobacteria,Firmicutes,Verrucomicrobia,and Actinobacteria,with Bacteroidetes and Firmicutes significantly higher in all treatment samples than control(P<0.001).All dominant phyla in the list were shared across all samples and accounted for 89%(control)and 97%(treatment)of the total 16S rRNA.The nutrient flux rates from the sediments into the water(treatment group)were 51%(ammonium),88%(nitrate),77%(nitrite)and 45%(phosphate)higher,relative to the control implying increased mineralization,degradability,and mobility of the benthic nutrients.Similarly,significantly increased oxygen consumption rates were evident in the clam area signifying improved oxygen distribution within the sediment.The organic effluent contents associated with total-organic matter,carbon,nitrogen,and,phosphate were lower among the clam treatments relative to the control.Our results describe the potential roles and mechanisms contributed by marine bivalve S.subcrenata on benthic-bacterial-community assembly,nutrient balance,and effluent reduction in the sediments of aquaculture wastewaters bioremediation system.
基金Supported by the National Key R&D Program of China(No.2019YFD0900704)the National Natural Science Foundation of China(No.31972791)the Earmarked Fund for Shandong Modern AgroIndustry Technology Research System(No.SDAIT-14)。
文摘Ocean warming is altering the habitats of marine invertebrates,which has resulted in an increased physiological stress to marine molluscs,especially those intertidal bivalves,such as the ark shell Scapharca broughtonii.We investigated the physiological and transcriptional responses of ark shells to acute and chronic thermal stress results showed that at 33℃,a significantly higher cumulative mortality(55.7%)occurred under acute thermal stress than chronic thermal stress.The apoptosis rate of hemocytes was sustained at higher levels and the necrosis rate was increased significantly in a time-dependent manner under acute thermal stress.However,under chronic thermal stress,the apoptosis and necrosis rates exhibited similar change trends:a rapid increase followed by a gradual decline and sustained at a relatively high level until the end of the experiment.The expressions of heat shock protein genes(HSP20 and HSP90),apoptosis-related genes(TRAF6,GRP78,NIX,and Casp-3),antioxidative-related genes(GST and MRP)and cellular detoxification-related genes(HbⅡB,NOS-1,HO-1,and ENO-1)were upregulated significantly under both acute and chronic thermal stresses.These results demonstrated that the anti-apoptotic system,antioxidant defense system,cellular detoxification system,and heat shock proteins(HSPs)played vital roles for ark shells in response to thermal stress.As acute thermal stress can result in irreversible damage to marine molluscs,it is thus advised that chronic thermal stress should be used to select thermal-resistant ark shell strains.
基金supported by the National Sea Welfare Project(201205023)China Agriculture Research System(CARS-48)the earmarked fund for Modern Agro-industry Technology Research System in Shandong Province(SDAIT-14)
文摘In order to study the food consumption, preference and day-night predatorydifference of Asterias amurensis on Scapharca broughtonii, the experiments werecarried out at the temperatures ranging from 16 ℃ to 20 ℃, salinity of 28.2 ± 2.1,dissolved oxygen of 7.5±0.7 mg/L and pH of 8.0 ± 0.3.The results provided basic datafor promoting steady and healthy development of the multiplication and cultivation of S.broughtonii. The results of food consumption suggested that the food intake of starfishincreased with the density of S. broughtonii at all conditions. The food consumption ofstarfish in different sizes on S. broughtonii in the same size had no significant difference(p>0.05), but it was significantly different among S. broughtonii in different sizes. Thestarfish had the highest feeding rate on the smallest S. broughtonii. Our findings alsoverified the positive relation between the weight of food intake of starfish in differentsizes on the density and size of S. broughtonii. The feeding rhythm of starfish onS. broughtonii in different sizes showed a certain day-night difference, higher at nightthan in the day. The maximum food consumption occurred when the size of S.broughtonii became larger. The results showed that 30 ind/m2 was the suitable seabottom sowing density for S. broughtonii. Our data indicated that the ability to avoidpredators and rivals increased as the shell length rose. Based on prey selectivity,bivalves that have a lower commercial value may be used to clear away A. amurensis.
