Objective:To explore potential inhibitors of viral enzymes of SARS CoV-2.Methods:The in-silico docked potential of anti-viral,antibiotic,and analgesic drugs were studied for inhibition of the nonstructural protein(NSP...Objective:To explore potential inhibitors of viral enzymes of SARS CoV-2.Methods:The in-silico docked potential of anti-viral,antibiotic,and analgesic drugs were studied for inhibition of the nonstructural protein(NSP)9,NSP3,and NSP15 of SARS CoV-2 using recent structural peculiarities of these enzymes,3 D optimized structures of drugs and algorithm-based ligand inhibitory potential.Results:Teicoplanin,azithromycin,and remdesivir potentially inhibited NSP9(Dock-score 9620,5472 and 6252,respectively),NSP3(Dock-score 9846,5604 and 5548,respectively)and NSP15(Dock-score 10960,6414 and 6002,respectively).Conclusions:Teicoplanin acts as a significant receptor antagonist and potentially inhibits the SARS CoV-2 enzymes.展开更多
Introduction: Covid-19 is a systemic disease that can spread to all systems. Among the gastrointestinal manifestations, pancreatic involvement can have a major prognostic impact. We report 3 acute pancreatitis cases o...Introduction: Covid-19 is a systemic disease that can spread to all systems. Among the gastrointestinal manifestations, pancreatic involvement can have a major prognostic impact. We report 3 acute pancreatitis cases occurring during Covid-19, in Dakar. Case 1: 65-year-old woman who presented with intense atypical epigastric pain. Physical examination revealed obesity, high blood pressure and abdominal tenderness. Biological tests found increase CRP (134 mg/l) and lipasemia (312 UI/l). Abdominal CT scan showed findings of Balthazar grade C acute pancreatitis. RT-PCR for SARS CoV 2 RT-PCR was positive. The outcome was favorable. Case 2: 56-year-old woman patient with history of nephroangiosclerosis who presented with dyspnea, cough, fever and moderate epigastric pain. Physical examination revealed epigastric tenderness, high blood pressure, anuria. Biological testing, noted increase CRP (96 mg/l), lipasemia (793 UI/l), creatinine (227 mg/l) and urea (3.84 g/l). Abdominal CT scan showed acute edematous pancreatitis findings. SARS CoV 2 RT PCR was positive. The outcome was favorable. Case 3: 27-year-old man who presented with physical asthenia, headache, and epigastric pain. Physical examination found epigastric tenderness. Elevated CRP level was of 102 mg/l and lipasemia level was of 427 UI/l (7N). Abdominal CT scan showed acute edematous pancreatitis findings. SARS CoV 2 RT PCR was positive. The outcome was favorable. Conclusion: Acute pancreatitis can occur during Covid-19 infection. However, the imputability to the Covid-19 disease necessitates to rule out the most common causes.展开更多
Objective:To determine the frequency and severity of the breakthrough infections and the associated factors in Malaysia.Methods:This cross-sectional study was conducted among the adult general population in Malaysia w...Objective:To determine the frequency and severity of the breakthrough infections and the associated factors in Malaysia.Methods:This cross-sectional study was conducted among the adult general population in Malaysia who completed at least one dose of vaccination.The validated online questionnaires were used for data collection between December 2022 to February 2023.The participants were recruited by a convenient sampling method.The data were analysed by descriptive statistics,and logistic regression by using SPSS(Version 27).Qualitative data from open-ended questions were analysed as thematic analysis by using RQDA software.Results:A total of 524 participants'data were analyzed and 77.5%of them completed three doses of COVID-19 vaccination.Breakthrough infections after vaccination were reported in 57.3%of the participants.Age group of 18 and 30 years(aOR 2.32,95%CI 1.01-5.32)and other ethnicities(aOR 2.00,95%CI 1.02-3.93)significantly associated with the occurrence of breakthrough infections.A total of 35.5%of the participants were not willing to take another booster dose in the future because of their attitudes towards fear of long-term side effects,lack of trust to the vaccine,less susceptibility to severe infection,belief in natural immunity,and myths.Conclusions:Future public health policies and interventions should be focused on disseminating the information about safety of booster doses of vaccine,management and re-assurance of side effects,and targeted vaccination to the working(younger age group)and ethnic minorities.展开更多
BACKGROUND There are difficulties in diagnosing nosocomial transmission of severe acute respiratory syndrome coronavirus 2(SARS-CoV-2) infection in hospital settings. Furthermore, mortality of cases of nosocomial infe...BACKGROUND There are difficulties in diagnosing nosocomial transmission of severe acute respiratory syndrome coronavirus 2(SARS-CoV-2) infection in hospital settings. Furthermore, mortality of cases of nosocomial infection(NI) with SARS-CoV-2 is higher than that of the general infected population. In the early stage of the pandemic in Taiwan, as patients were not tested for SARS-CoV-2 at admission, NIs often go undetected. Strictly applying the systematic polymerase chain reaction(PCR) screening, as a standard infection control measure was subsequently implemented to reduce NI incidence. However, evidence on risk factors for SARS-CoV-2 NIs among healthcare workers(HCWs) and caregivers is limited.AIM To assess NI incidence of SARS-CoV-2 among hospital staff, hospitalized patients, and caregivers, and the transmission routes of clusters of infection.METHODS This descriptive retrospective analysis at our hospital from May 15 to August 15, 2021 included data on 132 SARS-CoV-2 NIs cases among hospital staff, inpatients, and caregivers who previously tested negative but subsequently identified with a positive SARS-CoV-2 reverse transcriptase-PCR(RT-PCR) test results, or a hospital staff who tested positive following routine SARS-CoV-2 RT-PCR test. Chi-square tests were performed to compare the differences between hospital staff and private caregivers, and between clusters and sporadic infections.RESULTS Overall, 9149 patients and 2005 hospital staff members underwent routine SARS-CoV-2 RT-PCR testing, resulting in 12 confirmed cluster and 23 sporadic infections. Among the index cases of the clusters, three(25%) cases were among hospital staff and nine(75%) cases were among other contacts. Among sporadic infections, 21(91%) cases were among hospital staff and two(9%) cases were among other contacts(P < 0.001). There was an average of 8.08 infections per cluster. The secondary cases of cluster infection were inpatients(45%), hospital staff(30%), and caregivers(25%). Private caregivers constituted 27% and 4% of the clusters and sporadic infections, respectively(P = 0.024);92.3% of them were infected in the clusters. The mortality rate was 0.0%.CONCLUSION The incidence of SARS-CoV-2 infection was relatively high among private caregivers, indicating a need for infection control education in this group, such as social distancing, frequent handwashing, and wearing PPE.展开更多
Novel coronavirus(SARS‑CoV‑2,SARS‑CoV‑2 for short)infection can cause a series of gastrointestinal damage.Related studies have reported that SARS‑CoV‑2 infection can lead to the occurrence and progression of ulcerativ...Novel coronavirus(SARS‑CoV‑2,SARS‑CoV‑2 for short)infection can cause a series of gastrointestinal damage.Related studies have reported that SARS‑CoV‑2 infection can lead to the occurrence and progression of ulcerative colitis,which may be related to the cytokine storm caused by SARS‑CoV‑2 infection.Recently,we have also paid attention to whether infection with SARS‑CoV‑2 will aggravate the condition of UC patients receiving biological immunotherapy and whether vaccination with SARS‑CoV‑2 is safe and effective for these patients.At present,the interaction mechanism between SARS‑CoV‑2,SARS‑CoV‑2 vaccine and ulcerative colitis is not fully understood,and more research is needed to further clarify the relationship.展开更多
The SARS–CoV–2 virus is released from an infectious source(such as a sick person)and adsorbed on aerosols,which can form pathogenic microorganism aerosols,which can affect human health through airborne transmission....The SARS–CoV–2 virus is released from an infectious source(such as a sick person)and adsorbed on aerosols,which can form pathogenic microorganism aerosols,which can affect human health through airborne transmission.Efficient sampling and accurate detection of microorganisms in aerosols are the premise and basis for studying their properties and evaluating their hazard.In this study,we built a set of sub-micron aerosol detection platform,and carried out a simulation experiment on the SARS–CoV–2 aerosol in the air by wet-wall cyclone combined with immunomagnetic nanoparticle adsorption sampling and ddPCR.The feasibility of the system in aerosol detection was verified,and the influencing factors in the detection process were experimentally tested.As a result,the sampling efficiency was 29.77%,and extraction efficiency was 98.57%.The minimum detection limit per unit volume of aerosols was 250 copies(102copies/m L,concentration factor 2.5).展开更多
Severe acute respiratory syndrome coronavirus-2 (SARS CoV-2) has been a global threat spreading in Sierra Leone, and many studies are being conducted using various Statistical models to predict the probable evolution ...Severe acute respiratory syndrome coronavirus-2 (SARS CoV-2) has been a global threat spreading in Sierra Leone, and many studies are being conducted using various Statistical models to predict the probable evolution of this pandemic. In this paper, we use the autoregressive integrated moving average (ARIMA) model with the aim of forecasting the cumulative confirmed cases of SARS CoV-2 in Sierra Leone. The Akaike Information Criterion (AIC) was applied to the training data as a criterion method to select the best model. In addition, the statistical measure RMSE and MAPE were utilized for testing this data, and the model with the minimum RMSE and MAPE was selected for future forecasting. ARIMA (3, 2, 1) was confirmed to be the optimal model based on the lowest AIC value. This model was then applied to study the trend of SARS CoV-2 from 1st February 2022 to 30th February 2022. The result shows that incidence of SARS CoV-2 from 1st February 2022 to 30th February 2022, increasing growth steep in Sierra Leone (7718.629, 95% confidence limit of 6785.985 - 8651.274).展开更多
1|INTRODUCTION The first case of severe acute respiratory syndrome coronavirus 2(SARS‐CoV‐2)was reported in Wuhan,China,in December 2019.The virus spread worldwide within a few weeks of its outbreak,resulting in cor...1|INTRODUCTION The first case of severe acute respiratory syndrome coronavirus 2(SARS‐CoV‐2)was reported in Wuhan,China,in December 2019.The virus spread worldwide within a few weeks of its outbreak,resulting in coronavirus disease(COVID‐19)[1,2].In March 2020,the World Health Organization(WHO)declared the COVID‐19 outbreak,a global pandemic.展开更多
The typhoon, as a mature tropical cyclone that develops in the western part of the North Pacific Ocean with high wind speed and heavy rainfall, is one of the most lethal and costly of natural disasters for the densely...The typhoon, as a mature tropical cyclone that develops in the western part of the North Pacific Ocean with high wind speed and heavy rainfall, is one of the most lethal and costly of natural disasters for the densely populated countries of East Asia. It can be easily detected by space-borne sensors operated at microwave, visible or infrared bands （Liu et al., 2014）. Synthetic Aperture Radar （SAR） is a kind of active imaging radar, which can detect the targets with high resolution at one-meter level. SARs can be used to extract the sea surface wind and the eyes of typhoons or hurricanes （Friedman and Li, 2000; Zhang and Perrie, 2012; Li, 2015; Jin et al., 2014; Liu et al., 2014）. As a pioneer project of Haiyang-3 （HY-3）, the Chinese C-band SAR satellite of Gaofen-3 （GF-3） was launched in August 2016 under China High-resolution Earth Observation System （CEOS）. GF-3 carries a multi-polarized C-band SAR with a highest spatial resolution of one meter, the most imaging modes in the word of twelve and a long designed lifespan of 8 years. Haiyang-2A （HY-2A）, which was launched in August 2011, is the first Chinese marine dynamic environment satellite with a main payload of Ku-band microwave scatterometer （Jiang et al., 2012; Ye et al., 2015）. One of the objectives of HY-2A scatterometer （HY-2A SCAT） is monitoring sea surface wind field of global ocean.展开更多
基金supported by Institute of Chemistry,University of the Punjab Lahore,Pakistan
文摘Objective:To explore potential inhibitors of viral enzymes of SARS CoV-2.Methods:The in-silico docked potential of anti-viral,antibiotic,and analgesic drugs were studied for inhibition of the nonstructural protein(NSP)9,NSP3,and NSP15 of SARS CoV-2 using recent structural peculiarities of these enzymes,3 D optimized structures of drugs and algorithm-based ligand inhibitory potential.Results:Teicoplanin,azithromycin,and remdesivir potentially inhibited NSP9(Dock-score 9620,5472 and 6252,respectively),NSP3(Dock-score 9846,5604 and 5548,respectively)and NSP15(Dock-score 10960,6414 and 6002,respectively).Conclusions:Teicoplanin acts as a significant receptor antagonist and potentially inhibits the SARS CoV-2 enzymes.
文摘Introduction: Covid-19 is a systemic disease that can spread to all systems. Among the gastrointestinal manifestations, pancreatic involvement can have a major prognostic impact. We report 3 acute pancreatitis cases occurring during Covid-19, in Dakar. Case 1: 65-year-old woman who presented with intense atypical epigastric pain. Physical examination revealed obesity, high blood pressure and abdominal tenderness. Biological tests found increase CRP (134 mg/l) and lipasemia (312 UI/l). Abdominal CT scan showed findings of Balthazar grade C acute pancreatitis. RT-PCR for SARS CoV 2 RT-PCR was positive. The outcome was favorable. Case 2: 56-year-old woman patient with history of nephroangiosclerosis who presented with dyspnea, cough, fever and moderate epigastric pain. Physical examination revealed epigastric tenderness, high blood pressure, anuria. Biological testing, noted increase CRP (96 mg/l), lipasemia (793 UI/l), creatinine (227 mg/l) and urea (3.84 g/l). Abdominal CT scan showed acute edematous pancreatitis findings. SARS CoV 2 RT PCR was positive. The outcome was favorable. Case 3: 27-year-old man who presented with physical asthenia, headache, and epigastric pain. Physical examination found epigastric tenderness. Elevated CRP level was of 102 mg/l and lipasemia level was of 427 UI/l (7N). Abdominal CT scan showed acute edematous pancreatitis findings. SARS CoV 2 RT PCR was positive. The outcome was favorable. Conclusion: Acute pancreatitis can occur during Covid-19 infection. However, the imputability to the Covid-19 disease necessitates to rule out the most common causes.
文摘Objective:To determine the frequency and severity of the breakthrough infections and the associated factors in Malaysia.Methods:This cross-sectional study was conducted among the adult general population in Malaysia who completed at least one dose of vaccination.The validated online questionnaires were used for data collection between December 2022 to February 2023.The participants were recruited by a convenient sampling method.The data were analysed by descriptive statistics,and logistic regression by using SPSS(Version 27).Qualitative data from open-ended questions were analysed as thematic analysis by using RQDA software.Results:A total of 524 participants'data were analyzed and 77.5%of them completed three doses of COVID-19 vaccination.Breakthrough infections after vaccination were reported in 57.3%of the participants.Age group of 18 and 30 years(aOR 2.32,95%CI 1.01-5.32)and other ethnicities(aOR 2.00,95%CI 1.02-3.93)significantly associated with the occurrence of breakthrough infections.A total of 35.5%of the participants were not willing to take another booster dose in the future because of their attitudes towards fear of long-term side effects,lack of trust to the vaccine,less susceptibility to severe infection,belief in natural immunity,and myths.Conclusions:Future public health policies and interventions should be focused on disseminating the information about safety of booster doses of vaccine,management and re-assurance of side effects,and targeted vaccination to the working(younger age group)and ethnic minorities.
文摘BACKGROUND There are difficulties in diagnosing nosocomial transmission of severe acute respiratory syndrome coronavirus 2(SARS-CoV-2) infection in hospital settings. Furthermore, mortality of cases of nosocomial infection(NI) with SARS-CoV-2 is higher than that of the general infected population. In the early stage of the pandemic in Taiwan, as patients were not tested for SARS-CoV-2 at admission, NIs often go undetected. Strictly applying the systematic polymerase chain reaction(PCR) screening, as a standard infection control measure was subsequently implemented to reduce NI incidence. However, evidence on risk factors for SARS-CoV-2 NIs among healthcare workers(HCWs) and caregivers is limited.AIM To assess NI incidence of SARS-CoV-2 among hospital staff, hospitalized patients, and caregivers, and the transmission routes of clusters of infection.METHODS This descriptive retrospective analysis at our hospital from May 15 to August 15, 2021 included data on 132 SARS-CoV-2 NIs cases among hospital staff, inpatients, and caregivers who previously tested negative but subsequently identified with a positive SARS-CoV-2 reverse transcriptase-PCR(RT-PCR) test results, or a hospital staff who tested positive following routine SARS-CoV-2 RT-PCR test. Chi-square tests were performed to compare the differences between hospital staff and private caregivers, and between clusters and sporadic infections.RESULTS Overall, 9149 patients and 2005 hospital staff members underwent routine SARS-CoV-2 RT-PCR testing, resulting in 12 confirmed cluster and 23 sporadic infections. Among the index cases of the clusters, three(25%) cases were among hospital staff and nine(75%) cases were among other contacts. Among sporadic infections, 21(91%) cases were among hospital staff and two(9%) cases were among other contacts(P < 0.001). There was an average of 8.08 infections per cluster. The secondary cases of cluster infection were inpatients(45%), hospital staff(30%), and caregivers(25%). Private caregivers constituted 27% and 4% of the clusters and sporadic infections, respectively(P = 0.024);92.3% of them were infected in the clusters. The mortality rate was 0.0%.CONCLUSION The incidence of SARS-CoV-2 infection was relatively high among private caregivers, indicating a need for infection control education in this group, such as social distancing, frequent handwashing, and wearing PPE.
基金In‑Hospital Fund Project of No.940 Hospital(NO.20yjky020)General Research Fund Project of Huoshenshan Hospital(NO.HSS‑217)Gansu Provincial Science and Technology Department Social Development Department Clinical Medicine Research Center Project(NO.21JR7RA017)。
文摘Novel coronavirus(SARS‑CoV‑2,SARS‑CoV‑2 for short)infection can cause a series of gastrointestinal damage.Related studies have reported that SARS‑CoV‑2 infection can lead to the occurrence and progression of ulcerative colitis,which may be related to the cytokine storm caused by SARS‑CoV‑2 infection.Recently,we have also paid attention to whether infection with SARS‑CoV‑2 will aggravate the condition of UC patients receiving biological immunotherapy and whether vaccination with SARS‑CoV‑2 is safe and effective for these patients.At present,the interaction mechanism between SARS‑CoV‑2,SARS‑CoV‑2 vaccine and ulcerative colitis is not fully understood,and more research is needed to further clarify the relationship.
基金supported by the NSFC(Nos.61701176 and 62071119)Macao FDCT(No.0065/2020/A2)+4 种基金Natural Science Foundation of Hunan Province of China(Nos.2022JJ50052,2018JJ3130 and 2020JJ5145)Hunan Key R&D Projects(No.2021SK2003)Nanjing Important Science&Technology Specific Projects(No.2021-11005)2022 Special Project for the Construction of Innovative Provinces to Fight the COVID-19 Outbreak(No.2022SK2115)Open Funding of State Key Laboratory of Oral Diseases(No.SKLOD2022OF05)。
文摘The SARS–CoV–2 virus is released from an infectious source(such as a sick person)and adsorbed on aerosols,which can form pathogenic microorganism aerosols,which can affect human health through airborne transmission.Efficient sampling and accurate detection of microorganisms in aerosols are the premise and basis for studying their properties and evaluating their hazard.In this study,we built a set of sub-micron aerosol detection platform,and carried out a simulation experiment on the SARS–CoV–2 aerosol in the air by wet-wall cyclone combined with immunomagnetic nanoparticle adsorption sampling and ddPCR.The feasibility of the system in aerosol detection was verified,and the influencing factors in the detection process were experimentally tested.As a result,the sampling efficiency was 29.77%,and extraction efficiency was 98.57%.The minimum detection limit per unit volume of aerosols was 250 copies(102copies/m L,concentration factor 2.5).
文摘Severe acute respiratory syndrome coronavirus-2 (SARS CoV-2) has been a global threat spreading in Sierra Leone, and many studies are being conducted using various Statistical models to predict the probable evolution of this pandemic. In this paper, we use the autoregressive integrated moving average (ARIMA) model with the aim of forecasting the cumulative confirmed cases of SARS CoV-2 in Sierra Leone. The Akaike Information Criterion (AIC) was applied to the training data as a criterion method to select the best model. In addition, the statistical measure RMSE and MAPE were utilized for testing this data, and the model with the minimum RMSE and MAPE was selected for future forecasting. ARIMA (3, 2, 1) was confirmed to be the optimal model based on the lowest AIC value. This model was then applied to study the trend of SARS CoV-2 from 1st February 2022 to 30th February 2022. The result shows that incidence of SARS CoV-2 from 1st February 2022 to 30th February 2022, increasing growth steep in Sierra Leone (7718.629, 95% confidence limit of 6785.985 - 8651.274).
文摘1|INTRODUCTION The first case of severe acute respiratory syndrome coronavirus 2(SARS‐CoV‐2)was reported in Wuhan,China,in December 2019.The virus spread worldwide within a few weeks of its outbreak,resulting in coronavirus disease(COVID‐19)[1,2].In March 2020,the World Health Organization(WHO)declared the COVID‐19 outbreak,a global pandemic.
基金The National Key R&D Program of China under contract No.2016YFC1401000the Joint Foundation of National Natural Science Foundation of China and the Marine Science Center of Shandong Province under contract No.U1406404the National Natural Science Foundation of China under contract Nos 1506206 and 41476152
文摘The typhoon, as a mature tropical cyclone that develops in the western part of the North Pacific Ocean with high wind speed and heavy rainfall, is one of the most lethal and costly of natural disasters for the densely populated countries of East Asia. It can be easily detected by space-borne sensors operated at microwave, visible or infrared bands （Liu et al., 2014）. Synthetic Aperture Radar （SAR） is a kind of active imaging radar, which can detect the targets with high resolution at one-meter level. SARs can be used to extract the sea surface wind and the eyes of typhoons or hurricanes （Friedman and Li, 2000; Zhang and Perrie, 2012; Li, 2015; Jin et al., 2014; Liu et al., 2014）. As a pioneer project of Haiyang-3 （HY-3）, the Chinese C-band SAR satellite of Gaofen-3 （GF-3） was launched in August 2016 under China High-resolution Earth Observation System （CEOS）. GF-3 carries a multi-polarized C-band SAR with a highest spatial resolution of one meter, the most imaging modes in the word of twelve and a long designed lifespan of 8 years. Haiyang-2A （HY-2A）, which was launched in August 2011, is the first Chinese marine dynamic environment satellite with a main payload of Ku-band microwave scatterometer （Jiang et al., 2012; Ye et al., 2015）. One of the objectives of HY-2A scatterometer （HY-2A SCAT） is monitoring sea surface wind field of global ocean.
