DNA methylation, an important epigenetic modification, serves as a key function in the polyploidization of numerous crops. In this study, early generations of resynthesized Brassica napus （F1,S1-S3）, ancestral paren...DNA methylation, an important epigenetic modification, serves as a key function in the polyploidization of numerous crops. In this study, early generations of resynthesized Brassica napus （F1,S1-S3）, ancestral parents B. rapa and B. oleracea were analyzed to characterize their DNA methylation status during polyploidization, applying DNA methylation-sensitive amplifica- tion polymorphism （MSAP） and high-performance liquid chromatography methods. In F, 53.4% fragments were inherited from both A- and C-genomes. Besides, 5.04 and 8.87% fragments in F were inherited from A- and C- genome, respectively. 5.85 and 0.8% fragments were newly appeared and disappeared in resynthesized B. napus, respectively. 13.1% of these gene sites were identified with methylation changes in F, namely, hypermethylation （7.86%） and hypomethylation （5.24%）. The lowest methylation status was detected in F （38.7%） compared with in S1-S3. In S3, 40.32% genes were methylated according to MSAP analysis. Sequencing of methylated fragments indicated that genes involved in multiple biological processes were modified, including transcription factors, protein modification, and transporters. Expression ananlysis of DNA methyltransferase I and DNA methyltransferase chromomethylase 3 in different materials was consistent to the DNA methylation status. These results can generally facilitate dissection of how DNA methylation contributes to genetic stability and improvement of B. napus during polypLoidization.展开更多
Resynthesized rapeseeds obtained by crossing the diploid parents Brassica rapa and Brassica oleracea have significant potential in hybrid breeding because of their higher genetic basis compared with Brassica napus cul...Resynthesized rapeseeds obtained by crossing the diploid parents Brassica rapa and Brassica oleracea have significant potential in hybrid breeding because of their higher genetic basis compared with Brassica napus cultivars. In this study, an 8 × 8 complete diallel experiment using four B. napus cultivars （BN） and four resynthesized rapeseed lines （RS） as parents was designed to study heterosis and genetic inheritance for yield components. The results showed that heterosis for yield per plant, the number of pods per plant and number of seeds per pod were high, with means 32.77, 24.49 and 15.71%, respectively. Diallel analysis showed that both additive and dominant effects were significant for yield and yield components. All traits, except for 1 000-seed weight, were significant for bl mean squares and exhibited directional dominance. Dominant genes had positive effects on yield per plant, pods per plant and 1000-seed weight, and negative effects on seeds per pod （r=-0.86, -0.62, -0.41, and 0.47, respectively）. Narrow-sense heritability for yield per plant, pods per plant, and 1 000-seed weight and seeds per pod were 66, 31, 46 and 78% for the four traits, respectively. The Fl hybrids showed considerable yields compared to B. napus cultivars when B. napus cultivars and resynthesized rapeseeds were used as parents （NR hybrids）, with many more pods per plant and lower seeds per pod compared with the rapeseed cultivars, indicating that the resynthesized rapeseed may be applicable in current hybrid breeding programs.展开更多
Rapeseed(Brassica napus,AACC)was formed by hybridization between progenitor species Brassica rapa(AA)and Brassica oleracea(CC).As a result of a limited number of hybridization events between specific progenitor genoty...Rapeseed(Brassica napus,AACC)was formed by hybridization between progenitor species Brassica rapa(AA)and Brassica oleracea(CC).As a result of a limited number of hybridization events between specific progenitor genotypes and strong breeding selection for oil quality traits,rapeseed has limited genetic diversity.The production of resynthesized B.napus lines via interspecific hybridization of the diploid progenitor species B.rapa and B.oleracea is one possible way to increase genetic variation in rapeseed.However,most resynthesized lines produced so far have been reported to be meiotically unstable and infertile,in contrast to established B.napus cultivars.This hinders both maintenance and use of this germplasm in breeding programs.We characterized a large set of 140 resynthesized lines produced by crosses between B.rapa and B.oleracea,as well as between B.rapa and wild C genome species(B.incana,B.hilarionis,B.montana,B.Bourgeaui,B.villosa and B.cretica)for purity(homozygosity),fertility,and genome stability.Self-pollinated seed set,seeds per ten pods as well as percentage pollen viability were used to estimate fertility.SNP genotyping was performed using the Illumina Infinium Brassica 60K array for 116 genotypes,with at least three individuals per line.Most of the material which had been advanced through multiple generations was no longer pure,with heterozygosity detected corresponding to unknown parental contributions via outcrossing.Fertility and genome stability were both genotypedependent.Most lines had high numbers of copy number variants(CNVs),indicative of meiotic instability,and high numbers of CNVs were significantly associated with reduced fertility.Eight putatively stable resynthesized B.napus lines were observed.Further investigation of these lines may reveal the mechanisms underlying this effect.Our results suggest that selection of stable resynthesized lines for breeding purposes is possible.展开更多
Resynthesized Brassica napus lines are of great potential in hybrid breeding for their higher genetic basis. An 8×8 complete diallel experiment was designed using 4 B. napus cultivars （ BN） and 4 resynt...Resynthesized Brassica napus lines are of great potential in hybrid breeding for their higher genetic basis. An 8×8 complete diallel experiment was designed using 4 B. napus cultivars （ BN） and 4 resynthesized rapeseed lines （ RS） as parents, and all 56 were divided into BN × BN, NR （ RS × BN/ BN × RS ） and RS × RS types. Their heterosis for agronomic characteristics were investigated, especially on NR hybrids. Results showed that NR hybrids had higher plants, longer branches, more siliques and fewer seeds per silique at highly significant level when compared with conventional rapeseed cultivars. For yield per plant, all 32 NR cross combinations showed positive mid - parent heterosis and 25% of the combinations （8 from 32 NRs） showed positive high - parental heterosis. On average of the 32 NRs, the heterosis was 30. 56% over mid - parents and - 8. 57% over high - parents. Compared with BN x BN hybrids, NRs had more siliques per plant （437. 0 vs 370. 9） and fewer seeds per silique （11.6 vs 17.3）. There was no significant difference on thousand seed weight between NR and BN × BN hybrids. NR hybrids showed abnormal flower organs, including A： 59% of NR combinations had more or less ab-normal perianth or anthers; B：pollen fertility reduced, ranging from 56. 2% to 95. 5% and 80.1% on average; C ：poor silique - set （33. 4% on average） and seed set （7. 8 ±3.6 seeds per silique） after self -pollination ; D： frequent univalents and multivalents in metaphase I of meiosis; E ： they showed highly significant self - incompatibility.展开更多
基金supported by the National Key Basic Research Program of China (2015CB150201)the National Natural Science Foundation of China (NSFC, 31330057, 31401414)+2 种基金the Priority Academic Program Development of Jiangsu Higher Education Institutions of Chinathe Jiangsu Province Science Foundation, China (BK20140478, 14KJB210008)the Jiangsu Province Graduate Inno vation Fund, China (KYZZ15_0367)
文摘DNA methylation, an important epigenetic modification, serves as a key function in the polyploidization of numerous crops. In this study, early generations of resynthesized Brassica napus （F1,S1-S3）, ancestral parents B. rapa and B. oleracea were analyzed to characterize their DNA methylation status during polyploidization, applying DNA methylation-sensitive amplifica- tion polymorphism （MSAP） and high-performance liquid chromatography methods. In F, 53.4% fragments were inherited from both A- and C-genomes. Besides, 5.04 and 8.87% fragments in F were inherited from A- and C- genome, respectively. 5.85 and 0.8% fragments were newly appeared and disappeared in resynthesized B. napus, respectively. 13.1% of these gene sites were identified with methylation changes in F, namely, hypermethylation （7.86%） and hypomethylation （5.24%）. The lowest methylation status was detected in F （38.7%） compared with in S1-S3. In S3, 40.32% genes were methylated according to MSAP analysis. Sequencing of methylated fragments indicated that genes involved in multiple biological processes were modified, including transcription factors, protein modification, and transporters. Expression ananlysis of DNA methyltransferase I and DNA methyltransferase chromomethylase 3 in different materials was consistent to the DNA methylation status. These results can generally facilitate dissection of how DNA methylation contributes to genetic stability and improvement of B. napus during polypLoidization.
基金supported by the National Natural Science Foundation of China (30471009)
文摘Resynthesized rapeseeds obtained by crossing the diploid parents Brassica rapa and Brassica oleracea have significant potential in hybrid breeding because of their higher genetic basis compared with Brassica napus cultivars. In this study, an 8 × 8 complete diallel experiment using four B. napus cultivars （BN） and four resynthesized rapeseed lines （RS） as parents was designed to study heterosis and genetic inheritance for yield components. The results showed that heterosis for yield per plant, the number of pods per plant and number of seeds per pod were high, with means 32.77, 24.49 and 15.71%, respectively. Diallel analysis showed that both additive and dominant effects were significant for yield and yield components. All traits, except for 1 000-seed weight, were significant for bl mean squares and exhibited directional dominance. Dominant genes had positive effects on yield per plant, pods per plant and 1000-seed weight, and negative effects on seeds per pod （r=-0.86, -0.62, -0.41, and 0.47, respectively）. Narrow-sense heritability for yield per plant, pods per plant, and 1 000-seed weight and seeds per pod were 66, 31, 46 and 78% for the four traits, respectively. The Fl hybrids showed considerable yields compared to B. napus cultivars when B. napus cultivars and resynthesized rapeseeds were used as parents （NR hybrids）, with many more pods per plant and lower seeds per pod compared with the rapeseed cultivars, indicating that the resynthesized rapeseed may be applicable in current hybrid breeding programs.
基金funded by the German Research Council(DFG grant MA6473/2-1,awarded to AM)The Mason lab is partially funded by the Deutsche Forschungsgemeinschaft(DFG,German Research Foundation)under Germany’s Excellence Strategy-EXC 2070-390732324.
文摘Rapeseed(Brassica napus,AACC)was formed by hybridization between progenitor species Brassica rapa(AA)and Brassica oleracea(CC).As a result of a limited number of hybridization events between specific progenitor genotypes and strong breeding selection for oil quality traits,rapeseed has limited genetic diversity.The production of resynthesized B.napus lines via interspecific hybridization of the diploid progenitor species B.rapa and B.oleracea is one possible way to increase genetic variation in rapeseed.However,most resynthesized lines produced so far have been reported to be meiotically unstable and infertile,in contrast to established B.napus cultivars.This hinders both maintenance and use of this germplasm in breeding programs.We characterized a large set of 140 resynthesized lines produced by crosses between B.rapa and B.oleracea,as well as between B.rapa and wild C genome species(B.incana,B.hilarionis,B.montana,B.Bourgeaui,B.villosa and B.cretica)for purity(homozygosity),fertility,and genome stability.Self-pollinated seed set,seeds per ten pods as well as percentage pollen viability were used to estimate fertility.SNP genotyping was performed using the Illumina Infinium Brassica 60K array for 116 genotypes,with at least three individuals per line.Most of the material which had been advanced through multiple generations was no longer pure,with heterozygosity detected corresponding to unknown parental contributions via outcrossing.Fertility and genome stability were both genotypedependent.Most lines had high numbers of copy number variants(CNVs),indicative of meiotic instability,and high numbers of CNVs were significantly associated with reduced fertility.Eight putatively stable resynthesized B.napus lines were observed.Further investigation of these lines may reveal the mechanisms underlying this effect.Our results suggest that selection of stable resynthesized lines for breeding purposes is possible.
文摘Resynthesized Brassica napus lines are of great potential in hybrid breeding for their higher genetic basis. An 8×8 complete diallel experiment was designed using 4 B. napus cultivars （ BN） and 4 resynthesized rapeseed lines （ RS） as parents, and all 56 were divided into BN × BN, NR （ RS × BN/ BN × RS ） and RS × RS types. Their heterosis for agronomic characteristics were investigated, especially on NR hybrids. Results showed that NR hybrids had higher plants, longer branches, more siliques and fewer seeds per silique at highly significant level when compared with conventional rapeseed cultivars. For yield per plant, all 32 NR cross combinations showed positive mid - parent heterosis and 25% of the combinations （8 from 32 NRs） showed positive high - parental heterosis. On average of the 32 NRs, the heterosis was 30. 56% over mid - parents and - 8. 57% over high - parents. Compared with BN x BN hybrids, NRs had more siliques per plant （437. 0 vs 370. 9） and fewer seeds per silique （11.6 vs 17.3）. There was no significant difference on thousand seed weight between NR and BN × BN hybrids. NR hybrids showed abnormal flower organs, including A： 59% of NR combinations had more or less ab-normal perianth or anthers; B：pollen fertility reduced, ranging from 56. 2% to 95. 5% and 80.1% on average; C ：poor silique - set （33. 4% on average） and seed set （7. 8 ±3.6 seeds per silique） after self -pollination ; D： frequent univalents and multivalents in metaphase I of meiosis; E ： they showed highly significant self - incompatibility.
