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基于RNA-based NGS检测非小细胞肺癌融合基因临床实践中国专家共识 被引量:18
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作者 中国初级卫生保健基金会肿瘤精准诊疗专业委员会 中国抗癌协会肿瘤精准治疗专业委员会 +7 位作者 中国抗癌协会肿瘤病理专委会肺癌学组 钟华 韩宝惠 林冬梅 周清华 宋勇 周晓燕 周清 《中国肺癌杂志》 CAS CSCD 北大核心 2023年第11期801-812,共12页
基于RNA水平的二代测序(RNA-based next-generation sequencing, RNA-based NGS)技术已被非小细胞肺癌(non-small cell lung cancer, NSCLC)临床实践指南和专家共识推荐为融合基因的检测方法之一。NSCLC可用药靶点主要包括基因突变和融... 基于RNA水平的二代测序(RNA-based next-generation sequencing, RNA-based NGS)技术已被非小细胞肺癌(non-small cell lung cancer, NSCLC)临床实践指南和专家共识推荐为融合基因的检测方法之一。NSCLC可用药靶点主要包括基因突变和融合,用于评估靶向治疗可行性的基因突变和融合基因检测均不可或缺。目前,基于DNA水平的NGS(DNA-based NGS)结合RNA-based NGS一次性同步检测基因突变和融合的技术已部分应用于临床实践。然而,RNA-based NGS检测融合基因的应用时机、应用场景和质控方面在我国仍缺乏规范和标准。本共识将进一步明确RNA-based NGS在融合基因检测中的应用时机、应用场景和质控,并给予指导性建议,推动RNA-based NGS在NSCLC临床诊疗中的应用,使患者能够最大程度地从融合基因检测中获益。 展开更多
关键词 非小细胞肺癌 融合基因 rna-based NGS 靶向治疗 专家共识
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Brain delivering RNA-based therapeutic strategies by targeting mTOR pathway for axon regeneration after central nervous system injury 被引量:5
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作者 Ming-Xi Li Jing-Wen Weng +2 位作者 Eric S.Ho Shing Fung Chow Chi Kwan Tsang 《Neural Regeneration Research》 SCIE CAS CSCD 2022年第10期2157-2165,共9页
Injuries to the central nervous system(CNS)such as stroke,brain,and spinal cord trauma often result in permanent disabilities because adult CNS neurons only exhibit limited axon regeneration.The brain has a surprising... Injuries to the central nervous system(CNS)such as stroke,brain,and spinal cord trauma often result in permanent disabilities because adult CNS neurons only exhibit limited axon regeneration.The brain has a surprising intrinsic capability of recovering itself after injury.However,the hostile extrinsic microenvironment significantly hinders axon regeneration.Recent advances have indicated that the inactivation of intrinsic regenerative pathways plays a pivotal role in the failure of most adult CNS neuronal regeneration.Particularly,substantial evidence has convincingly demonstrated that the mechanistic target of rapamycin(mTOR)signaling is one of the most crucial intrinsic regenerative pathways that drive axonal regeneration and sprouting in various CNS injuries.In this review,we will discuss the recent findings and highlight the critical roles of mTOR pathway in axon regeneration in different types of CNS injury.Importantly,we will demonstrate that the reactivation of this regenerative pathway can be achieved by blocking the key mTOR signaling components such as phosphatase and tensin homolog(PTEN).Given that multiple mTOR signaling components are endogenous inhibitory factors of this pathway,we will discuss the promising potential of RNA-based therapeutics which are particularly suitable for this purpose,and the fact that they have attracted substantial attention recently after the success of coronavirus disease 2019 vaccination.To specifically tackle the blood-brain barrier issue,we will review the current technology to deliver these RNA therapeutics into the brain with a focus on nanoparticle technology.We will propose the clinical application of these RNA-mediated therapies in combination with the brain-targeted drug delivery approach against mTOR signaling components as an effective and feasible therapeutic strategy aiming to enhance axonal regeneration for functional recovery after CNS injury. 展开更多
关键词 axon sprouting axon regeneration brain targeted drug delivery CNS injury ischemic stroke mTOR nanoparticle neural circuit reconstruction PTEN rna-based therapeutics
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RNA-Based Biocontrols--A New Paradigm in Crop Protection 被引量:8
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作者 Matthew Bramlett Geert Plaetinck Peter Maienfisch 《Engineering》 SCIE EI 2020年第5期522-527,共6页
Modern agribusiness plays a vital role in safeguarding and improving the production,quality,and quantity of food,feed,fiber,and fuel.Growing concerns over the impact of chemical pesticides on health and the environmen... Modern agribusiness plays a vital role in safeguarding and improving the production,quality,and quantity of food,feed,fiber,and fuel.Growing concerns over the impact of chemical pesticides on health and the environment have stimulated the industry to search for alternative and greener solutions.Over the last years,the RNA interference(RNAi)process has been identified as a very promising new approach to complement the arsenal of foliar spray,soil,or seed treatments applied as chemical and biological pest control agents,and of plant-incorporated protectants(PIPs).RNA-based active ingredients(AIs)possess a unique mode of action and can be implemented via both genetic modification(GM)and biocontrol approaches.RNA-based AIs promise to deliver the selectivity and sustainability desired in future crop protection agents.This is due to their utilization of a natural process to exert control and their high level of selectivity,which leads to reduced risk for non-target organisms(NTOs).This review discusses the advantages and limitations of RNA-based solutions in crop protection and recent research progress toward RNA-based biocontrols against the Colorado potato beetle(CPB),corn rootworm(CRW),and soy stink bug(SSB).Many challenges still exist on the road to the implementation of a broad range of RNA-based products and their widespread use and application.Despite these challenges,it can be expected that RNA-based AIs will become valuable new tools complementing the current arsenal of crop-protection solutions. 展开更多
关键词 rna-based biocontrols RNA interference(RNAi) Colorado potato beetle(CPB) Corn rootworm(CRW) Soy stink bug(SSB)
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ImmuneScore as a novel RNA-based prognostic signature superior to PD-L1 in advanced nonsquamous NSCLC patients receiving chemotherapy combined with immune checkpoint inhibitor therapy
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作者 Zhihuan Lin Jianhua Zhan Li Zhang 《Journal of Cancer Metastasis and Treatment》 2024年第1期390-405,共16页
Aim:Our study aimed to explore the prognostic predictive potential of a novel RNA-based signature called ImmuneScore in advanced non-squamous NSCLC patients receiving combined immune checkpoint inhibitor(ICI)treatment... Aim:Our study aimed to explore the prognostic predictive potential of a novel RNA-based signature called ImmuneScore in advanced non-squamous NSCLC patients receiving combined immune checkpoint inhibitor(ICI)treatment and chemotherapy.Methods:RNA-sequencing data of 113 patients screened out from ORIENT-11 trial were retrospectively analyzed.ImmuneScore was calculated by the ESTIMATE algorithm.The association of ImmuneScore with early tumor progression,progression-free survival(PFS),and overall survival(OS)was analyzed using chi-square test,Cox regression test,and log-rank test.Receiver operating characteristic(ROC)curves were generated,with higher values of area under the ROC curves(AUCs)indicating better prediction ability.Results:ImmuneScore was negatively correlated with early tumor progression rate(4.3%vs.18.6%,P=0.013)while positively correlated with PFS(HR=0.29,95%CI:0.16-0.53,P<0.001)and OS(HR=0.32,95%CI:0.18-0.58,P<0.001),demonstrating higher AUCs than that of Programmed death-ligand 1(PD-L1)tumor proportion score(TPS)(early tumor progression:0.64 vs.0.68;PFS:0.67 vs.0.58;OS:0.73 vs.0.63).Nomograms integrating ImmuneScore and other significant variables(age and T-stage for PFS,gender and T-stage for OS)yielded good performance in PFS and OS prediction.Conclusion:ImmuneScore serves as a novel RNA-based prognostic signature superior to PD-L1 in advanced non-squamous NSCLC patients receiving chemotherapy combined with ICI therapy.Higher ImmuneScore indicates lower early tumor progression rate,longer PFS,and longer OS. 展开更多
关键词 Non-squamous non-small cell lung cancer immune checkpoint inhibitors rna-based signature ImmuneScore
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RNA-based therapies in hepatocellular carcinoma:state of the art and clinical perspectives
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作者 Le Xing Zhen-Kai Wang +2 位作者 Dong-Mei Li Jing Li Ming Liu 《Hepatoma Research》 2024年第1期371-386,共16页
Liver cancer is a heterogeneous disease and is one of the leading causes of cancer deaths worldwide.Hepatocellular carcinoma, comprising approximately 90% of cases, presents a formidable challenge with a lessthan 20% ... Liver cancer is a heterogeneous disease and is one of the leading causes of cancer deaths worldwide.Hepatocellular carcinoma, comprising approximately 90% of cases, presents a formidable challenge with a lessthan 20% 5-year survival rate despite recent treatment advancements. The impediments of drug resistance andoff-target effects underscore the critical need for innovative and efficacious therapies. Harnessing the growingunderstanding of RNA function offers a promising avenue to address previously "undruggable" proteins,transcripts, and genes. Various RNAs demonstrate the potential to selectively act on these targets, expanding thescope of therapeutic interventions. With diverse regulatory roles in cancer pathways, RNAs emerge as valuabletargets and tools for anticancer therapy development. This article provides an in-depth exploration of currentRNA-based therapies, elucidates their mechanisms of action, and discusses their combinations withchemo-/immunotherapies in clinical trials for hepatocellular carcinoma. 展开更多
关键词 rna-based therapies drug resistance mRNA vaccines
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RNA-based nanomedicines and their clinical applications
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作者 Lin-Jia Su Zi-Han Ji +5 位作者 Mo-Xi Xu Jia-Qing Zhu Yi-Hai Chen Jun-Fei Qiao Yi Wang Yao-Xin Lin 《Nano Research》 SCIE EI CSCD 2023年第12期13182-13204,共23页
RNA-based nanomedicines encompass a range of therapeutic approaches that utilize RNA molecules or molecules that target RNAs for the treatment or prevention of diseases.These include antisense oligonucleotides(ASOs),s... RNA-based nanomedicines encompass a range of therapeutic approaches that utilize RNA molecules or molecules that target RNAs for the treatment or prevention of diseases.These include antisense oligonucleotides(ASOs),small interfering RNAs(siRNAs),endogenous microRNAs(miRNAs),messenger RNAs(mRNAs),clustered regularly interspersed short palindromic repeats-associated protein 9(CRISPR/Cas9),single guide RNAs(sgRNAs),as well as RNA aptamers.These therapeutic agents exert their effects through various mechanisms such as gene inhibition,addition,replacement,and editing.The advancement of RNA biology and the field of RNA therapy has paved the way for the development and utilization of RNA-based nanomedicine in human healthcare.One remarkable example of RNA-based nanomedicine is the mRNA-based vaccines including mRNA-1273(Moderna)and BNT162b2(Pfizer/BioNTech)that have been successfully employed in response to the coronavirus disease 2019(COVID-19)pandemic.This review aims to highlight the advantages of RNA-based nanomedicines,provides an overview of significant developments in delivery systems,elucidates the molecular mechanisms of action underlying RNA-based nanomedicines,and discusses their clinical applications.Additionally,the review will address the existing challenges and innovations in delivery platforms while exploring the future possibilities for these promising RNA-based nanomedicines. 展开更多
关键词 rna-based nanomedicine conjugate-based delivery system nanoparticle-based delivery system clinical trial
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LTR-mediated retroposition as a mechanism of RNA-based duplication in metazoans
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《Science Foundation in China》 CAS 2017年第1期36-,共1页
Subject Code:C03With the support by the National Natural Science Foundation of China,the Chinese Academy of Sciences,and the National Key Basic Research Program of China,Prof.Zhang Yong(张勇)and colleagues at the Inst... Subject Code:C03With the support by the National Natural Science Foundation of China,the Chinese Academy of Sciences,and the National Key Basic Research Program of China,Prof.Zhang Yong(张勇)and colleagues at the Institute of Zoology,Chinese Academy of Sciences uncovered a general mechanism mediated by LTR retrotransposons to create transcribed RNA-based duplicates in metazoans,which 展开更多
关键词 LTR-mediated retroposition as a mechanism of rna-based duplication in metazoans RNA
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The contribution of extracellular RNA and its derived biomaterials in disease management
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作者 Yu Wei Zhangyi Wang +6 位作者 Zixuan Qin Qianqian Wan Yutao Li Franklin R.Tay Chenyu Wang Tong Zhang Lina Niu 《BMEMat(BioMedical Engineering Materials)》 2025年第2期103-127,共25页
The RNA found in the circular system is known as extracellular RNA(exRNA).This kind of RNA has been found to play a biological role similar to that of a messenger.They can be used as indicators of disease status or th... The RNA found in the circular system is known as extracellular RNA(exRNA).This kind of RNA has been found to play a biological role similar to that of a messenger.They can be used as indicators of disease status or the physiological health of an organism.A large number of RNA-based biomaterials have been developed by simulating the biological function and structure of natural RNA molecules.The structural programmability of RNA-based biomaterials provides the spur for scientists to pioneer new approaches in disease detection and prevention.Nevertheless,the link between exRNA function and the design of RNAbased biomaterials has not been fully understood.Understanding the biological structure and function of exRNA will contribute to the clinical translation of this novel biotechnology.The present review discusses the research progress associated with exRNA and their derivatives to bridge the gap between natural exRNA and RNA-based biomaterials. 展开更多
关键词 extracellular RNA PATHOGENESIS rna-based materials RNA nanotechnology therpeutics
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非编码RNA在心血管疾病诊断和治疗的进展
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作者 曲婵娟 王怡宁 金征宇 《中华医学杂志》 CAS CSCD 北大核心 2020年第11期873-876,共4页
心血管疾病是心血管系统基因调节网络失调的结果,而非编码RNA在其发育、生理和疾病病理生理的基因表达中发挥着关键的调节作用。非编码RNA表达具有细胞和器官特异度,在多种人体组织、体液,特别是血液、尿液或脑脊液中,存在与疾病相关的... 心血管疾病是心血管系统基因调节网络失调的结果,而非编码RNA在其发育、生理和疾病病理生理的基因表达中发挥着关键的调节作用。非编码RNA表达具有细胞和器官特异度,在多种人体组织、体液,特别是血液、尿液或脑脊液中,存在与疾病相关的非编码RNA,稳定性高,易获取和检测,对某些疾病具有高敏感度和特异度,有潜力成为心血管疾病危险分层、诊断及预后的生物标志物,目前FDA已经批准lncRNA前列腺癌抗原3应用于临床常规诊断前列腺癌。在治疗方面,已经有以miR-21和miR-34等为靶向的多种药物进入临床试验阶段,使患者结局改善并且耐受性良好。因此,非编码RNA在应用于阐明某些心血管疾病的发病机制、成为新型的生物标志物和靶向治疗药物等方面值得期待。 展开更多
关键词 非编码RNA 生物学标记 rna-based药物
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Perspectives on plant virus diseases in a climate change scenario of elevated temperatures
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作者 Wei‑An Tsai Christopher A.Brosnan +1 位作者 Neena Mitter Ralf G.Dietzgen 《Stress Biology》 2022年第1期223-248,共26页
Global food production is at risk from many abiotic and biotic stresses and can be affected by multiple stresses simultaneously.Virus diseases damage cultivated plants and decrease the marketable quality of produce.Im... Global food production is at risk from many abiotic and biotic stresses and can be affected by multiple stresses simultaneously.Virus diseases damage cultivated plants and decrease the marketable quality of produce.Importantly,the progression of virus diseases is strongly affected by changing climate conditions.Among climate-changing vari-ables,temperature increase is viewed as an important factor that affects virus epidemics,which may in turn require more efficient disease management.In this review,we discuss the effect of elevated temperature on virus epidem-ics at both macro-and micro-climatic levels.This includes the temperature effects on virus spread both within and between host plants.Furthermore,we focus on the involvement of molecular mechanisms associated with tempera-ture effects on plant defence to viruses in both susceptible and resistant plants.Considering various mechanisms proposed in different pathosystems,we also offer a view of the possible opportunities provided by RNA-based technologies for virus control at elevated temperatures.Recently,the potential of these technologies for topical field applications has been strengthened through a combination of genetically modified(GM)-free delivery nanoplat-forms.This approach represents a promising and important climate-resilient substitute to conventional strategies for managing plant virus diseases under global warming scenarios.In this context,we discuss the knowledge gaps in the research of temperature effects on plant-virus interactions and limitations of RNA-based emerging technologies,which should be addressed in future studies. 展开更多
关键词 Elevated temperatures Virus epidemics Plant virus control rna-based approaches Nanoparticles
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