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The PcERF5 promotes anthocyanin biosynthesis in red-fleshed pear(Pyrus communis)through both activating and interacting with PcMYB transcription factors 被引量:1
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作者 CHANG Yao-jun CHEN Guo-song +4 位作者 YANG Guang-yan SUN Cong-rui WEI Wei-lin Schuyler S.KORBAN WU Jun 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2023年第9期2687-2704,共18页
As there is a strong interest in red-skinned pears,the molecular mechanism of anthocyanin regulation in red-skinned pears has been widely investigated;however,little is known about the molecular mechanism of anthocyan... As there is a strong interest in red-skinned pears,the molecular mechanism of anthocyanin regulation in red-skinned pears has been widely investigated;however,little is known about the molecular mechanism of anthocyanin regulation in red-fleshed pears due to limited availability of such germplasm,primarily found in European pears(Pyrus communis).In this study,based on transcriptomic analysis in red-fleshed and white-fleshed pears,we identified an ethylene response factor(ERF)from P.communis,PcERF5,of which expression level in fruit flesh was significantly correlated with anthocyanin content.We then verified the function of PcERF5 in regulating anthocyanin accumulation by genetic transformation in both pear skin and apple calli.PcERF5 regulated anthocyanin biosynthesis by different regulatory pathways.On the one hand,PcERF5 can activate the transcription of flavonoid biosynthetic genes(PcDFR,PcANS and PcUFGT)and two key transcription factors encoding genes PcMYB10 and PcMYB114.On the other hand,PcERF5 interacted with PcMYB10 to form the ERF5-MYB10 protein complex that enhanced the transcriptional activation of PcERF5 on its target genes.Our results suggested that PcERF5 functioned as a transcriptional activator in regulating anthocyanin biosynthesis,which provides new insights into the regulatory mechanism of anthocyanin biosynthesis.This new knowledge will provide guidance for molecular breeding of red-fleshed pear. 展开更多
关键词 pyrus communis red-fleshed anthocyanin biosynthesis PcERF5 PcMYB10/PcMYB114
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Enhanced Phytoextraction of Cd and Cu in Ricinus communis L.with Chelators Related to Metal Concentrations in Soil Pore Water
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作者 Guo Jinghua Wang Shuifeng 《Journal of Northeast Agricultural University(English Edition)》 2025年第1期19-26,共8页
Cadmium(Cd)or excess copper(Cu)has a great impact in terms of toxicity on living organisms as it severely affects crop growth,yield and food security;thus,warranting appropriate measures for the remediation of Cd or C... Cadmium(Cd)or excess copper(Cu)has a great impact in terms of toxicity on living organisms as it severely affects crop growth,yield and food security;thus,warranting appropriate measures for the remediation of Cd or Cu polluted soils.Phytoextraction of heavy metal(HM)using tolerant plants along with organic chelators has gained global attention,and this study provided further insights into this issue.Pot experiments were performed to evaluate the effects of different types of chelators[ethylenediamine tetraacetic acid(EDTA),ethylenediamine disuccinic acid(EDDS)and citric acid(CA)]to improve the phytoextraction capacity of Ricinus communis L.for the metals Cd and Cu.Contaminated soil from a copper smelter was used in this study.A rhizon soil sampler was used to determine the metal concentrations in soil pore water.The results indicated that R.communis was an adequate candidate for chelator induced phytoextraction under the experimental conditions and that EDDS would be a good candidate chelator for the phytoextraction of Cu in soils.EDTA addition obviously improved the uptake of Cd and Cu in R.communis;however,it posed the greatest risk because the concentration of HMs in soil pore water was very high even after 40 days.Compared with EDTA and EDDS,CA had few effects on Cd or Cu uptake in R.communis.Linear relationships between the metal uptake in R.communis shoots and the maximum HM concentrations in soil pore water under HM,2.5,5,and 10 mmol·kg^(-1) treatments were typically observed.From the results of this study,it could be concluded that EDDS treatments played a promising role in increasing the uptake of Cd or Cu and reducing its phytotoxicity.EDDS application could be an effective approach for the phytoextraction of Cd or Cu from polluted soils by growing Ricinus communis L. 展开更多
关键词 environmental science soil contamination PHYTOREMEDIATION Ricinus communis l. CHElATOR
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Inorganic Elements in Kernel of Amygdalus communis L. Measured Using ICP-OES Method 被引量:2
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作者 丁玲 彭镰心 刘圆 《Agricultural Science & Technology》 CAS 2012年第6期1254-1259,共6页
[Objective] The aim was to study on distribution of inorganic elements in kernel of Amygdalus communis L., providing reference for quality evaluation of A. communis L. species. [Method] Totally 26 species of inorganic... [Objective] The aim was to study on distribution of inorganic elements in kernel of Amygdalus communis L., providing reference for quality evaluation of A. communis L. species. [Method] Totally 26 species of inorganic elements in kernel, including Al, B, Be, Ca, Co, Cu, Fe, Mg, Mn, Mo, Na, Ni, P, Pb, Si, Sn, Sr, Ti, Zn, Cd, As, Se, V, Hg, Cr and K were measured with inductively coupled plasma emission spectrum (ICP-OES) and principal components analysis (PCA). [Result] A. communis L. of different species and in different factories showed a similar curve in content of inorganic elements; absolute contents of the elements differed significantly. In addition, the accumulated variance contribution of five principle factors achieved as high as 84.371% and the variance contribution made by the first three factors accounted for 67.546%, proving that Fe, Ti, Pb, Na, Se, Cu, Mo, K, Zn, Ni, Ca and Sr were characteristic elements. [Conclusion] The method, which is brief, rapid and accurate, can be used for determination of inorganic elements in kernel of A. communis L., providing theoretical references for further development and utilization of A. communis L. 展开更多
关键词 ICP-OES A. communis l. Inorganic element Principle component analysis
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Study on Cu Resistance of Ricinus communis L. Callus
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作者 康薇 董化洋 +2 位作者 金裕华 闵建华 郑进 《Agricultural Science & Technology》 CAS 2013年第12期1707-1709,1791,共4页
[Objective] The article studies the growth and Cu absorption of Ricinus communis L. callus under Cu stress. [Method] CuSO4.5H20 solutions with different Cu concentrations were added to callus subculture medium; callus... [Objective] The article studies the growth and Cu absorption of Ricinus communis L. callus under Cu stress. [Method] CuSO4.5H20 solutions with different Cu concentrations were added to callus subculture medium; callus was inoculated and Cu resistance index of callus was worked out. Cu content in callus was deter- mined with the method of Varian AA240FS. [Result] With the Cu concentration at 60 mg/L, the growth of callus was inhibited, its Cu resistance index was only 33.87%. With the Cu concentration at 40 mg/L, callus was faint yellow in color, and grew rapidly with its Cu resistance index at 61.29%. Such high level resistance could remain the same after six week after continuous subculture. In the 4t week of culture, Cu resistance index in treatments with Cu concentrations at 10, 20, 30, 40 mg/L was higher than that in the 3rd week, and the content of Cu in callus of the treatments was 0.33, 0.54, 1.16, 1.40 mg/g respectively. [Conclusion] Cu con- centration at 40 mg/L in culture medium can be the threshold for selecting Cu re- sistance R. communis callus. 展开更多
关键词 Ricinus communis l. Cu resistance callus SElECTION
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Commelina communis L.: Copper Hyperaccumulator Found in Anhui Province of China 被引量:18
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作者 TANG SHIRONG HUANG CHANGYONG and ZHU ZUXIANG (Department of Soil Science, College of Environmental Sciences and Natural Resources, Zhejiang Agricultural University, Hangzhou 310029 China) 《Pedosphere》 SCIE CAS CSCD 1997年第3期207-210,共4页
Commelina communis L. growing over some new copper mining wastelands at Bijiashan, Tongling City of Anhui Province, China, was found to be a copper hyperaccumulator. Its copper concentrations were 2707-6159 (4439±... Commelina communis L. growing over some new copper mining wastelands at Bijiashan, Tongling City of Anhui Province, China, was found to be a copper hyperaccumulator. Its copper concentrations were 2707-6159 (4439±2434) mg kg-1, 369-831 (731±142) mg kg-1, and 429-587 (547±57) mg kg-1, respectively, in the roots, stems, and leaves. The soils supporting the growth of the species had a copper concentration ranging from 4620 to 5020 mg kg-1 and averaging 4835±262 mg kg-1, suggesting that the species could not only grow on heavily copper-contaminated soils but also accumulate extraordinarily high concentration of copper. Thus, it shows great potential in the phytoremediation of copper-contaminated soils,the restoration of mined land, geochemical prospecting, and the study of environmental pollution changes. 展开更多
关键词 Anhui Province Commelina communis l. copper hyperaccumulator
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In vitro establishment of a highly effective method of castor bean (Ricinus communis L.) regeneration using shoot explants 被引量:3
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作者 ZHANG Ji-xing WANG Xiao-yu +8 位作者 FENG Zi-zhou GENG Xue-jun MU Sha-moli HUO Hong-yan TONG Huan LI Meng-zhu LI Yi CHI Yue CHEN Yong-sheng 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2016年第6期1417-1422,共6页
An efficient plant regeneration protocol was established for castor bean (Ricinus communis L.), in which 0.3 mg L-1 thidiazuron (TDZ) induced shoot clusters and increased the number of adventitious shoots from hyp... An efficient plant regeneration protocol was established for castor bean (Ricinus communis L.), in which 0.3 mg L-1 thidiazuron (TDZ) induced shoot clusters and increased the number of adventitious shoots from hypocotyl tissue. Our results showed that treatment under dark conditions significantly promoted the average number of shoots per explant to 37.36±4.54 (with a 6-d treatment). Modified 1/2 Murashige and Skoog (MS) basal medium supplemented with 440 mg L-1 Ca2+, 0.2 mg L-1 gibberellic acid and 0.1 mg L-1 TDZ significantly increased shoot elongation rates and lowered vitrification rates. Further- more, 1/2 MS media supplemented with 0.2 mg L-11-naphthaleneacetic acid induced a higher rooting rate compared with other culture conditions. 展开更多
关键词 Ricinus communis l. HYPOCOTYl dark pretreatment TDZ
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<i>Wrinkled</i>1 (WRI1) Homologs, AP2-Type Transcription Factors Involving Master Regulation of Seed Storage Oil Synthesis in Castor Bean (<i>Ricinus communis</i>L.) 被引量:5
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作者 Daichi Tajima Ayami Kaneko +6 位作者 Masatsugu Sakamoto Yumena Ito Nong Thi Hue Masayuki Miyazaki Yushi Ishibashi Takashi Yuasa Mari Iwaya-Inoue 《American Journal of Plant Sciences》 2013年第2期333-339,共7页
Among APETALA2 (AP2)-type plant specific transcription factor family, WRINKLED1 (WRI1), has appeared to be a master gene transcriptionally regulating a set of carbon metabolism- and fatty acid synthesis (FAS)-related ... Among APETALA2 (AP2)-type plant specific transcription factor family, WRINKLED1 (WRI1), has appeared to be a master gene transcriptionally regulating a set of carbon metabolism- and fatty acid synthesis (FAS)-related genes responsible for seed specific triacylglycerols (TAGs) storage in oil plants. B3 type transcription factors, such as ABI3 and FUS3, are known to be involved in seed development, such as seed storage protein synthesis and maturation. Based on the recent whole genome sequence data of castor bean (Ricinus communis L.), putative WRI1 homologs (RcWRI1, RcWRI2) specifically expressed in castor bean seed have been identified by comparing organ specific expression profiles among seed development-related transcription factors, seed storage specific genes (Ricin, RcOleosin) and a set of FAS genes including genes for sucrose synthase (RcSUS2), biotin carboxyl carrier protein (a subunit of acetyl-CoA carboxylase, RcBCCP2) and ketoacyl-acyl carrier protein synthase (RcKAS1). Immunoreactive signals with WRI1, FUS3 and ABI5-related polypeptides were also detected in seed specifically, consistent with the expression profiles of seed development-related genes. The WRI1 binding consensus sites, [CnTnG](n)(7)[CG], designated as the AW-box, were found at the promoter region of RcBCCP2 and RcKAS1. Thus, RcWRI1 possibly play a pivotal role in seed specific TAGs storage during seed development by directly activating FAS -related genes. 展开更多
关键词 AP2 CASTOR Bean Fatty Acid OIl Seed RICINUS communis l. Transcription Factor WRI1
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Genome-wide Identification,Classification and Expression Analysis of Lhc Supergene Family in Castor Bean(Ricinus communis L.) 被引量:4
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作者 Zhi ZOU Qixing HUANG Feng AN 《Agricultural Biotechnology》 CAS 2013年第6期44-48,51,共6页
Light-harvesting chlorophyll a/b-binding (LHC) proteins are a group of nuclear-encoded thylakoid proteins that play a key role in plant photosynthesis and are widely involved in light harvesting, energy transfer to ... Light-harvesting chlorophyll a/b-binding (LHC) proteins are a group of nuclear-encoded thylakoid proteins that play a key role in plant photosynthesis and are widely involved in light harvesting, energy transfer to the reaction center, maintenance of thylakoid membrane structure, photoprotection and response to en- vironmental conditions, etc. Although/dw supergene family is well characterized in model plants such as Arabidopsis, rice and poplar, little information is available in castor bean (Ricinus communis L. ). In this study, a genome-wide search was carried out for the first time to identify castor bean L/w genes and analyze the gene structures, biochemical properties, evolutionary relationships and expression characteristics based on the published data of castor bean genome and ESTs. According to the results, a total of 28 Rclhcs genes representing 13 gene families ( l_hca , l_hcb , Elip , Ohpl , Ohp2 , SEP1, SEP2 , SEP3 , SEP4 , SEP5 , PsbS , Rieske and FCII) and 25 subgene families were identified in castor bean genome; to be specific, 25 and 5 genes were found to have corresponding ESTs in NCBI and have al- ternative splicing isoforlns, respectively. These RcLhcs contain 0 to 9 introns and distribute on 26 of the 25 878 released scaffolds. All RcLhcs genes were found to be expressed in all examined tissues, i.e. leaf, flower, II/III stage endosperm, V/VI stage endosperm and seed, with the highest expression level in leaf tissue. 展开更多
关键词 Ricinus communis l. lhc supergcne family Genomc-wide ClASSIFICATION Expression analysis
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Proteomic Analyses of Three Inflorescence Styles of Castor(Ricinus communis L.)at Different Developmental Stages 被引量:1
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作者 Xue Lei Yong Zhao +5 位作者 Rui Luo Mingda Yin Yanpeng Wen Zhiyan Wang Xuemei Hu Fenglan Huang 《Phyton-International Journal of Experimental Botany》 SCIE 2023年第5期1621-1632,共12页
Castor(Ricinus communis L.)is one of ten oil crops in the world and has complex inflorescence styles.Generally,castor has three inflorescence types:single female inflorescence(SiFF),standard female inflorescence(StFF)... Castor(Ricinus communis L.)is one of ten oil crops in the world and has complex inflorescence styles.Generally,castor has three inflorescence types:single female inflorescence(SiFF),standard female inflorescence(StFF)and bisexual inflorescence(BF).StFF is realized as a restorer line and as a maintainer line,which was applied to castor hybrid breeding.However,the developmental mechanism of the three inflorescences is not clear.Therefore,we used proteomic techniques to analyze different inflorescence styles.A total of 72 diferentially abundant protein species(DAPs)were detected.These DAPs are primarily involved in carbon and energy metabolism and carbon fixation in the photosynthetic organism pathway.The results showed that DAPs are involved in photosynthesis to control the distribution of imported carbohydrates and exported photoassimilates and thus affect the inflorescence development of castor.In addition,these DAPs are also involved in cysteine and methionine metabolism.Quantitative real-time PCR(qRT-PCR)results demonstrated that the proteomics data collected in this study were reliable.Our findings indicate that the carbon cycle and amino acid metabolism influence the inflorescence development of castor. 展开更多
关键词 Ricinus communis l INFlORESCENCE PROTEOMICS
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Differential expression of salt tolerance related genes in Brassica campestris L. ssp. chinensis (L.) Makino var. communis Tsen et Lee 被引量:1
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作者 Yang QIU Xi-xiang LI Hai-ying ZHI Di SHEN Peng LU 《Journal of Zhejiang University-Science B(Biomedicine & Biotechnology)》 SCIE CAS CSCD 2009年第11期847-851,共5页
We examined salt tolerance responsive genes in Pak-choi under salt stress and analyze their potential function. The LRNA differential display was used to screen the transcript derived fragments (TDFs) related to sal... We examined salt tolerance responsive genes in Pak-choi under salt stress and analyze their potential function. The LRNA differential display was used to screen the transcript derived fragments (TDFs) related to salinity tolerance in tolerant and Loderately tolerant Pak-choi germplasm. Seventy-eight primer combinations generated 101 differential eDNA fragments, which ere divided into 10 expression types. Seven cDNA sequences (GenBank accession Nos. DQ006915-DQ006921) obtained and ,~quenced were highly homologous to some known expression genes or the genes related to the signaling pathways in plants under ifferent abiotic stress. 展开更多
关键词 Brassica campestris l. ssp. chinensis l.) Makino var. communis Tsen et lee Salinity tolerance Gene differential expression cDNA fragments Basic local alignment search tool (BlAST) analysis
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Cytocompatible cellulose nanofibers from invasive plant species Agave americana L.and Ricinus communis L.:a renewable green source of highly crystalline nanocellulose
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作者 Olga L.EVDOKIMOVA Carla S.ALVES +3 位作者 Radenka M.KRSMANOVIC WHIFFEN Zaida O.RTEGA Helena TOMáS Joao R.ODRIGUES 《Journal of Zhejiang University-Science B(Biomedicine & Biotechnology)》 SCIE CAS CSCD 2021年第6期450-461,共12页
In this study,the fibers of invasive species Agave americana L.and Ricinus communis L.were successfully used for the first time as new sources to produce cytocompatible and highly crystalline cellulose nanofibers.Cell... In this study,the fibers of invasive species Agave americana L.and Ricinus communis L.were successfully used for the first time as new sources to produce cytocompatible and highly crystalline cellulose nanofibers.Cellulose nanofibers were obtained by two methods,based on either alkaline or acid hydrolysis.The morphology,chemical composition,and crystallinity of the obtained materials were characterized by scanning electron microscopy(SEM)together with energy-dispersive X-ray spectroscopy(EDX),dynamic light scattering(DLS),X-ray diffraction(XRD),and Fourier transform infrared(FTIR)spectroscopy.The crystallinity indexes(CIs)of the cellulose nanofibers extracted from A.americana and R.communis were very high(94.1%and 92.7%,respectively).Biological studies evaluating the cytotoxic effects of the prepared cellulose nanofibers on human embryonic kidney 293 T(HEK293 T)cells were also performed.The nanofibers obtained using the two different extraction methods were all shown to be cytocompatible in the concentration range assayed(i.e.,0-500μg/mL).Our results showed that the nanocellulose extracted from A.americana and R.communis fibers has high potential as a new renewable green source of highly crystalline cellulose-based cytocompatible nanomaterials for biomedical applications. 展开更多
关键词 NANOFIBER NANOCEllUlOSE Agave americana l. Ricinus communis l. CRYSTAllINITY Invasive species Biomedical application
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Studies on Cell Suspension Culture of Ricinus communis L.
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作者 Wei KANG Jin ZHENG 《Agricultural Biotechnology》 CAS 2013年第6期21-23,28,共4页
Ricinus communis L. is a new copper hyperaccumulator growing on Tonglushan copper mine in Hubei Province, China. This study aimed to establish a suspension cell line of R. communis L. with stable and rapid growth for ... Ricinus communis L. is a new copper hyperaccumulator growing on Tonglushan copper mine in Hubei Province, China. This study aimed to establish a suspension cell line of R. communis L. with stable and rapid growth for further screening of heavy metal-resistant R. communis L. cells and breeding of hyperaccu- mulators. In this study, cell suspension culture conditions were optimized by using orthogonal experimental design with previously induced R. communis L. embyre- genic calluses as experimental materials, to establish the suspension cell line of R. communis L. Under the optimal conditions, growth curves of suspension cells and changes in pH of culture liquid were determined. The results showed that the optimal culture conditions for R. conmmnis L. suspension cell line were : MS + O. 5 rag/I, 6-BA + O. 2 mg/L NAA + 50 mg/L sucrose + 350 mg/L casein hydrolysate as basic medium, with callus inoculation amount of 2.5 g/50 ml, dark culture at (26 ±2) ℃ with shaking at 110 r/min. Under these conditions, increment of fresh weight and dry weight ofR. commun/s L. suspension cells reached the maximum of 4.56 g/(50 ml 14 d) and 0.49 g/(50 ml 16 d), respectively. Growth curves of R. communis L. suspension cells were basically in "S" shape. Each culture cycle lasted 16 d, and the rapid growth stage was from the 6th d to the 14th d. In a culture cycle, pH of the culture liquid declined first and then increased to the maximum and stabilized gradually. 展开更多
关键词 Ricinus communis l. Embyrogenic callus Orthogonal experimental design Suspension cell line
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Transcriptome Analysis of Inflorescence Development at the Five-Leaf Stage in Castor(Ricinus communis L.)
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作者 Yong Zhao Yaxuan Jiang +7 位作者 Li Wen Rui Luo Guorui Li Jianjun Di Mingda Yin Zhiyan Wang Fenglan Huang Fanjuan Meng 《Phyton-International Journal of Experimental Botany》 SCIE 2024年第4期713-723,共11页
The yield of castor is influenced by the type of inflorescence and the proportion of female flowers.However,there are few studies on the genetic mechanism involved in the development and differentiation of castor infl... The yield of castor is influenced by the type of inflorescence and the proportion of female flowers.However,there are few studies on the genetic mechanism involved in the development and differentiation of castor inflorescences.In this study,we performed transcriptomic analyses of three different phenotypes of inflorescences at the five-leaf stage.In comparison to the MI(complete pistil without willow leaves),290 and 89 differentially expressed genes(DEGs)were found in the SFI(complete pistil with willow leaves)and the BI(monoecious inflorescence),respectively.Among the DEGs,104 and 88 were upregulated in the SFI and BI,respectively,compared to the MI.In addition,186 DEGs and 1 DEG were downregulated in the SFI and BI compared to the MI.Moreover,we conducted GO and KEGG enrichment analyses of the DEGs.In comparison to the MI,the SFI and BI exhibited the enrichment of functional branches in DEGs,specifically in pollen wall assembly,pollen development,and cellular component assembly involved in morphogenesis.In our study,RADL5 showed low expression levels between SFI-vs.-MI types.In addition,we found that the expression of NAC in the SFI differed from that in MI and BI,and some genes related to hormonal signaling changed their expression levels during inflorescence differentiation.These results reveal the genetic mechanism of sex genotypes in castor,which will not only guide researchers in the breeding of castor but also provide a reference for genetic research on other flowering plants. 展开更多
关键词 Ricinus communis l RNA-SEQ INFlORESCENCE
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Vegetation Classification of Juniperus communis L. Species in Azerbaijan
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作者 Afag Rzaeva 《Journal of Food Science and Engineering》 2019年第6期197-198,共2页
The Republic of Azerbaijan, is a country in the south Caucasus having continental influenced climate with warm summer and mild cold, dry winters. Relating to its climate this region has a rich and very interesting veg... The Republic of Azerbaijan, is a country in the south Caucasus having continental influenced climate with warm summer and mild cold, dry winters. Relating to its climate this region has a rich and very interesting vegetation cover. In presented article the vegetation communities with the presence of Juniperus communis L. species and subspecies have been described. 展开更多
关键词 VEGETATION JUNIPERUS communis l. SPECIES subspecies.
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Advances in Origin,Evolution and Classification of Pyrus L.
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作者 Weishuang TONG Zhanbo GUAN Huashan GAO 《Asian Agricultural Research》 2022年第8期46-48,54,共4页
China is not only one of the origin centers of Pyrus L.,but also the earliest birthplace of Pyrus L.in the world.This paper reviews the evolution of Pyrus L.from the aspects of leaf edge morphology,inflorescence and f... China is not only one of the origin centers of Pyrus L.,but also the earliest birthplace of Pyrus L.in the world.This paper reviews the evolution of Pyrus L.from the aspects of leaf edge morphology,inflorescence and fruit type,and summarizes the research progress of classification and species distribution of Pyrus L.,which is of great significance for the protection,evaluation and utilization of germplasm resources. 展开更多
关键词 pyrus l. ORIGIN EVOlUTION Classification Species distribution Germplasm resources conservation
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蓖麻Caleosin基因家族鉴定及碱胁迫下表达分析
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作者 杜亚彤 徐元静 +3 位作者 李月明 韩沛霖 王竞红 蔺吉祥 《种子》 北大核心 2025年第8期21-29,共9页
利用蓖麻蛋白质序列文件筛选出蓖麻Caleosin基因家族成员,用生物信息学的方法对基因家族成员及编码蛋白质的多种性质进行预测和分析,通过实时荧光定量逆转录PCR(RT-qPCR)的方法测定萌发期耐碱性差异较大的2个蓖麻品种Caleosin基因家族... 利用蓖麻蛋白质序列文件筛选出蓖麻Caleosin基因家族成员,用生物信息学的方法对基因家族成员及编码蛋白质的多种性质进行预测和分析,通过实时荧光定量逆转录PCR(RT-qPCR)的方法测定萌发期耐碱性差异较大的2个蓖麻品种Caleosin基因家族成员在不同碱浓度下的表达模式。在蓖麻蛋白质序列文件中鉴定出RcCLO1和RcCLO2两个成员,它们分别属于H-Caleosin亚家族和L-Caleosin亚家族,并且由2个亚家族各自演化产生。RcCLO1和RcCLO2的进化高度保守,均具有作为Caleosin的关键功能和保守基序。RcCLO1和RcCLO2均能对碱胁迫做出响应,而RcCLO1可能是蓖麻Caleosin基因家族中主要的抗碱基因。 展开更多
关键词 蓖麻 Caleosin基因家族 生物信息学 碱胁迫
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蓖麻PLC2N基因的克隆与生物信息学分析
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作者 朱有军 张连宇 丛小惠 《中南农业科技》 2025年第9期46-49,共4页
在蓖麻(Ricinus communis L.)中克隆了PLC2N基因,运用生物信息学技术对PLC2N基因编码的蛋白质进行分析,以揭示其在蓖麻生长发育过程中的功能。结果表明,通过克隆蓖麻PLC2N基因,得到1785 bp的片段。PLC2N基因编码的蛋白质分子质量为67.98... 在蓖麻(Ricinus communis L.)中克隆了PLC2N基因,运用生物信息学技术对PLC2N基因编码的蛋白质进行分析,以揭示其在蓖麻生长发育过程中的功能。结果表明,通过克隆蓖麻PLC2N基因,得到1785 bp的片段。PLC2N基因编码的蛋白质分子质量为67.98839 ku,等电点为6.16,有594个氨基酸残基,高度亲水,无跨膜区;二级结构中α-螺旋结构在蛋白质序列中占28.11%,共计167种氨基酸;延长链占19.02%,包含113种氨基酸;β转角结构占6.57%,含有39种氨基酸;无规则卷曲部分占总氨基酸数量的46.30%,氨基酸数量约275种。三级结构预测结果显示,该蛋白质包含了α-螺旋、β-转角以及无规则卷曲等关键结构,其中α-螺旋在蛋白质中占据核心地位。经同源性分析,发现蓖麻中的PLC2N基因与陆地棉这一物种之间存在较接近的亲缘关系。 展开更多
关键词 蓖麻(Ricinus communis l.) PlC2N基因 克隆 生物信息学
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蓖麻PLC4基因的克隆与生物信息学分析
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作者 朱有军 张连宇 丛小惠 《中南农业科技》 2025年第11期17-20,51,共5页
蓖麻(Ricinus communis L.)作为重要的油料作物,其抗逆性研究对产业稳定发展至关重要,磷脂酶C(PLC)在植物逆境响应中发挥关键作用。以蓖麻Lm型雌性系aLmAB5品系为材料,采用PCR扩增技术克隆蓖麻PLC4基因(基因登录号:LOC8286461),并通过... 蓖麻(Ricinus communis L.)作为重要的油料作物,其抗逆性研究对产业稳定发展至关重要,磷脂酶C(PLC)在植物逆境响应中发挥关键作用。以蓖麻Lm型雌性系aLmAB5品系为材料,采用PCR扩增技术克隆蓖麻PLC4基因(基因登录号:LOC8286461),并通过生物信息学方法系统分析其编码蛋白质特性。结果显示,成功克隆得到长度为1770 bp的PLC4基因,测序验证与参考序列同源性达100%;其编码蛋白质由589个氨基酸组成,分子式为C_(3008)H_(4726)N_(812)O_(875)S_(31),分子质量为67260 g/mol,等电点7.61,属于亲水性不稳定蛋白;该蛋白含PLCXc、PLCYc和C23个高度保守结构域,二级结构以无规卷曲(48.56%)和α-螺旋(26.99%)为主,三级结构模型可信度高(GMQE=0.85),明确属于磷脂酰肌醇磷酸酶C基因家族;系统进化树分析表明,其与陆地棉PLC蛋白亲缘关系最近。研究结论为解析PLC4基因在蓖麻抗逆性中的作用机制提供理论依据,也为蓖麻抗逆分子育种提供候选基因资源。 展开更多
关键词 蓖麻(Ricinus communis l.) PlC4基因 基因克隆 生物信息学分析 磷脂酶C(PlC)
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梨AFLP分子连锁图谱的构建与分析 被引量:6
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作者 孙文英 张玉星 +1 位作者 李秀根 王龙 《华北农学报》 CSCD 北大核心 2009年第3期179-183,共5页
遗传图谱是数量性状基因定位、基因图位克隆及分子辅助育种等研究的基础,而目前国内在梨树上这方面的研究尚属空白。试验以早美酥×八月红的杂交F192株实生苗为作图群体,采用了扩增稳定、多态性丰富的16对MseⅠ/EcoRⅠ引物组合,对... 遗传图谱是数量性状基因定位、基因图位克隆及分子辅助育种等研究的基础,而目前国内在梨树上这方面的研究尚属空白。试验以早美酥×八月红的杂交F192株实生苗为作图群体,采用了扩增稳定、多态性丰富的16对MseⅠ/EcoRⅠ引物组合,对分离群体进行AFLP多态性检测,共获得208条多态性带,其中偏离孟德尔遗传的比率29.8%(P〈0.01)。应用Joinmap 3.0软件且结合“双假测交”策略,对208个AFLP分子标记进行了遗传连锁分析,构建了一张包含145个AFLP标记,分属20个连锁群的梨分子遗传连锁图谱,每个连锁群包含4-20个标记,平均为9.06个标记,图谱总长度覆盖梨基因组618.7 cM,标记间平均图距为6.58 cM。此图谱为梨树基因定位、比较基因组学和重要农艺性状的QTL定位等研究奠定了基础。 展开更多
关键词 分子连锁图谱 AFlP
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蓖麻LEA基因家族的全基因组鉴定、分类及其进化分析 被引量:3
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作者 邹智 黄启星 安锋 《中国油料作物学报》 CAS CSCD 北大核心 2013年第6期637-643,共7页
基于已公布的基因组和EST数据对蓖麻LEA基因家族进行全面鉴定和系统命名,并在此基础上分析了其基因结构、生化特征、进化关系和表达特性。结果显示,蓖麻基因组中存在27个LEA基因,分属于LEA_1、LEA_2、LEA_3、LEA_4、LEA_5、LEA_6、de... 基于已公布的基因组和EST数据对蓖麻LEA基因家族进行全面鉴定和系统命名,并在此基础上分析了其基因结构、生化特征、进化关系和表达特性。结果显示,蓖麻基因组中存在27个LEA基因,分属于LEA_1、LEA_2、LEA_3、LEA_4、LEA_5、LEA_6、dehydrin和SMP 8个亚家族,它们散布于24条scaffold上,含有0~2个内含子不等,且其中有3个基因存在可变剪接;根据编码蛋白中的Pfam结构域类型及其进化关系,将这些LEA基因依次命名为RcLEA1-1和-2、RcLEA2-1和-2、RcLEA3-1至-3、RcLEA4-1至-7、RcLEA5-1和-2、RcLEA6-1和-2、RcLEA7-1至-5和RcLEA8-1至-4;利用BLAT分析基因表达谱显示,在叶片、花、II/III期胚乳、V/VI期胚乳和种子等组织中,所有RcLEA基因都有表达;启动子分析表明,RcLEA基因的启动子区富含LTRE、ABRE、MYC、MYB和W-box等逆境应答相关顺式作用元件。 展开更多
关键词 蓖麻 全基因组 lEA基因家族 分类 进化分析
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