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水稻OsCAT2的Crispr/cas敲除植株的全基因表达谱分析
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作者 王联红 刘家林 +11 位作者 欧阳林娟 傅军如 贺浩华 朱昌兰 彭小松 贺晓鹏 陈小荣 边建民 徐杰 孙晓棠 周大虎 胡丽芳 《基因组学与应用生物学》 CAS CSCD 北大核心 2020年第12期5640-5646,共7页
为了进一步了解水稻过氧化氢酶基因OsCAT2的分子机制及其调控网络,本研究以野生型及OsCAT2基因的Crispr/cas转基因敲除植株为材料进行基因芯片分析。通过差异基因的筛选共获得5483个差异表达基因,其中3248个上调表达,2235个下调表达。通... 为了进一步了解水稻过氧化氢酶基因OsCAT2的分子机制及其调控网络,本研究以野生型及OsCAT2基因的Crispr/cas转基因敲除植株为材料进行基因芯片分析。通过差异基因的筛选共获得5483个差异表达基因,其中3248个上调表达,2235个下调表达。通过GO功能注释发现,差异基因在二价金属离子运输、锌-Ⅱ离子运输、次生代谢产物生物合成过程和二价无机阳离子转运代谢途径中显著富集;通过KEGG通路分析发现,差异基因在次生代谢产物的生物合成、植物-病原互作、光合作用、氰基氨基酸代谢和类黄酮生物合成途径中显著富集。进一步分析发现,差异表达基因中还包括一系列与植株分蘖数及抗性相关的基因。该研究为深入探讨水稻过氧化氢酶基因OsCAT2的作用机制提供了理论参考。 展开更多
关键词 水稻 过氧化氢酶 OsCAT2 差异基因
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水稻OsCAT3敲除植株的差异表达基因分析
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作者 张秋云 刘家林 +3 位作者 欧阳林娟 贺浩华 朱昌兰 胡丽芳 《分子植物育种》 CAS CSCD 北大核心 2020年第14期4507-4514,共8页
为了进一步研究OsCAT3的分子机制及分子调控网络,利用基因芯片对WT和OsCAT3crispr幼苗进行了全基因组分析。本研究利用CRISPR/cas9技术敲除过氧化氢酶基因OsCAT3,获得的转基因植株OsCAT3crispr。利用基因芯片技术分析发现,转基因植株OsC... 为了进一步研究OsCAT3的分子机制及分子调控网络,利用基因芯片对WT和OsCAT3crispr幼苗进行了全基因组分析。本研究利用CRISPR/cas9技术敲除过氧化氢酶基因OsCAT3,获得的转基因植株OsCAT3crispr。利用基因芯片技术分析发现,转基因植株OsCAT3crispr中差异表达基因共8 812个,其中4 580个表达上调,4 232个表达下调。对差异表达基因进行GO和KEGG富集分析发现,差异基因在毒素代谢以及光合作用相关的途径中显著富集,表明水稻过氧化氢酶基因OsCAT3可能与毒素代谢和光合作用途径有关。本试验对OsCAT3crispr进行基因芯片分析得到了大量的差异基因,对深入了解过氧化氢酶基因调控机制有重要的意义。 展开更多
关键词 水稻 OsCAT3 全基因组 芯片分析
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qGW11a/OsCAT8,encoding an amino acid permease,negatively regulates grain size and weight in rice 被引量:1
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作者 Peng Gao Feifan Chen +16 位作者 Haitang Liu Shijun Fan Jierui Zeng Xue Diao Yang Liu Wencheng Song Shifu Wang Jing Li Xiaobo Zhu Bin Tu Weilan Chen Ting Li Yuping Wang Bingtian Ma Shigui Li Hua Yuan Peng Qin 《The Crop Journal》 SCIE CSCD 2024年第4期1150-1158,共9页
Grain size is a key factor influencing grain weight in rice.In this study,a chromosome segment substitution line(CSSL9-17)was identified,that exhibits a significant reduction in both grain size and weight compared to ... Grain size is a key factor influencing grain weight in rice.In this study,a chromosome segment substitution line(CSSL9-17)was identified,that exhibits a significant reduction in both grain size and weight compared to its donor parent 93-11.Further investigation identified two quantitative trait loci(QTL)on chromosome 11,designated qGW11a and qGW11b,which contribute to 1000-grain weight with an additive effect.LOC_Os11g05690,encoding the amino acid permease OsCAT8,is the target gene of qGW11a.Overexpression of OsCAT8 resulted in decreased grain weight,while OsCAT8 knockout mutants exhibited increased grain weight.The 287-bp located within the OsCAT8 promoter region of 93-11 negatively regulates its activity,which is subsequently correlated with an increase in grain size and weight.These results suggest that OsCAT8 functions as a negative regulator of grain size and grain weight in rice. 展开更多
关键词 RICE Grain size Grain weight QTL OsCAT8
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OsCPK12 phosphorylates OsCATA and OsCATC to regulate H_(2)O_(2) homeostasis and improve oxidative stress tolerance in rice 被引量:1
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作者 Beifang Wang Pao Xue +11 位作者 Yingxin Zhang Xiaodeng Zhan Weixun Wu Ping Yu Daibo Chen Junlin Fu Yongbo Hong Xihong Shen Lianping Sun Shihua Cheng Qunen Liu Liyong Cao 《Plant Communications》 SCIE CSCD 2024年第3期179-196,共18页
Calcium-dependent protein kinases(CPKs),the best-characterized calcium sensors in plants,regulate many aspects of plant growth and development as well as plant adaptation to biotic and abiotic stresses.However,how CPK... Calcium-dependent protein kinases(CPKs),the best-characterized calcium sensors in plants,regulate many aspects of plant growth and development as well as plant adaptation to biotic and abiotic stresses.However,how CPKs regulate the antioxidant defense system remains largely unknown.We previously found that impaired function of OsCPK12 leads to oxidative stress in rice,with more H_(2)O_(2),lower catalase(CAT)activity,and lower yield.Here,we explored the roles of OsCPK12 in oxidative stress tolerance in rice.Our results show that OsCPK12 interacts with and phosphorylates OsCATA and OsCATC at Ser11.Knockout of either OsCATA or OsCATC leads to an oxidative stress phenotype accompanied by higher accumulation of H_(2)O_(2).Overexpression of the phosphomimetic proteins OsCATAS11D and OsCATCS11D in oscpk12-cr reduced the level of H2O2 accumulation.Moreover,OsCATAS11D and OsCATCS11D showed enhanced catalase activity in vivo and in vitro.OsCPK12-overexpressing plants exhibited higher CAT activity as well as higher tolerance to oxidative stress.Ourndings demonstrate that OsCPK12 affects CAT enzyme activity by phosphorylating OsCATA and OsCATC at Ser11 to regulate H2O2 homeostasis,thereby mediating oxidative stress tolerance in rice. 展开更多
关键词 OsCPK12 oscats oxidative tolerance Oryza sativa L
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